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ONTOLOGY REPORT - ANNOTATIONS

Term:renal system pattern specification
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Accession:GO:0072048 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.
Synonyms:related_synonym: renal system pattern formation


show annotations for term's descendants           Sort by:
metanephric capsule specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chr 5:41,867,118...41,870,497 JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chr 5:41,867,118...41,870,497 JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (PMID:12435636) UniProt PMID:12435636 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028 		JBrowse link
G PAX8 paired box 8 involved_in ISO (PMID:12435636) UniProt PMID:12435636 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865 		JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,922,252...3,927,836
Ensembl chr 5:3,610,225...3,615,279 		JBrowse link
G IRX2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chr 5:3,081,361...3,087,014 JBrowse link
proximal/distal pattern formation involved in nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:34,514,107...34,517,576
Ensembl chr16:53,622,409...53,624,653 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G IRX1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,922,252...3,927,836
Ensembl chr 5:3,610,225...3,615,279 		JBrowse link
G IRX2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chr 5:3,081,361...3,087,014 JBrowse link
G IRX3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:34,514,107...34,517,576
Ensembl chr16:53,622,409...53,624,653 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    multicellular organismal process 7370
      pattern specification process 484
        renal system pattern specification 8
          metanephric cap specification 0
          pattern specification involved in kidney development + 8
          renal system segmentation 0
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 6695
      anatomical structure development 6275
        multicellular organism development 5035
          system development 4378
            renal system development 406
              renal system pattern specification 8
                metanephric cap specification 0
                pattern specification involved in kidney development + 8
                renal system segmentation 0
paths to the root