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ONTOLOGY REPORT - ANNOTATIONS

Term:proximal/distal pattern formation involved in nephron development
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Accession:GO:0072047 term browser browse the term
Definition:The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).
Synonyms:exact_synonym: proximal/distal nephron patterning

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proximal/distal pattern formation involved in nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx3 iroquois homeobox 3 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955433:11,944,890...11,948,372
Ensembl chrNW_004955433:11,944,890...11,948,369 		JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx1 iroquois homeobox 1 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:2,072,540...2,099,781 JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:1,456,433...1,460,996
Ensembl chrNW_004955504:1,455,664...1,460,996 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748 		JBrowse link
G Irx1 iroquois homeobox 1 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:2,072,540...2,099,781 JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:1,456,433...1,460,996
Ensembl chrNW_004955504:1,455,664...1,460,996 		JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955433:11,944,890...11,948,372
Ensembl chrNW_004955433:11,944,890...11,948,369 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12628
    developmental process 5998
      anatomical structure development 5669
        nephron development 174
          proximal/distal pattern formation involved in nephron development 5
            proximal/distal pattern formation involved in mesonephric nephron development + 0
            proximal/distal pattern formation involved in metanephric nephron development + 2
            proximal/distal pattern formation involved in pronephric nephron development + 0
            specification of nephron tubule identity + 5
Path 2
Term Annotations click to browse term
  biological_process 12628
    developmental process 5998
      anatomical structure development 5669
        multicellular organism development 4634
          system development 4038
            renal system development 382
              kidney development 368
                nephron development 174
                  proximal/distal pattern formation involved in nephron development 5
                    proximal/distal pattern formation involved in mesonephric nephron development + 0
                    proximal/distal pattern formation involved in metanephric nephron development + 2
                    proximal/distal pattern formation involved in pronephric nephron development + 0
                    specification of nephron tubule identity + 5
paths to the root