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ONTOLOGY REPORT - ANNOTATIONS


Term:nephron development
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Accession:GO:0072006 term browser browse the term
Definition:The process whose specific outcome is the progression of the nephron over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.
Synonyms:related_synonym: nephrogenesis



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nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCHS1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26116661) Ensembl
MGI
PMID:26116661 GO_REF:0000107 NCBI chr11:6,753,383...6,787,896
Ensembl chr11:6,436,536...6,456,352
JBrowse link
G DCHS2 dachsous cadherin-related 2 acts_upstream_of_or_within ISO (PMID:26116661) MGI PMID:26116661 NCBI chr 4:146,597,168...146,858,314 JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26116661) Ensembl
MGI
PMID:26116661 GO_REF:0000107 NCBI chr 4:117,494,842...117,674,382
Ensembl chr 4:128,637,516...128,814,407
JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,145,974...44,181,343
Ensembl chr17:49,019,892...49,055,245
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,582,234...10,618,507
Ensembl chr20:10,582,094...10,618,383
JBrowse link
G NUP107 nucleoporin 107 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:66,198,838...66,254,505
Ensembl chr12:68,981,409...69,035,642
JBrowse link
G NUP133 nucleoporin 133 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:204,985,690...205,053,072
Ensembl chr 1:210,017,649...210,084,746
JBrowse link
G NUP160 nucleoporin 160 involved_in ISO (PMID:30179222) UniProt PMID:30179222 NCBI chr11:47,732,678...47,805,906
Ensembl chr11:48,281,972...48,352,998
JBrowse link
G NUP85 nucleoporin 85 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:69,152,452...69,182,688
Ensembl chr17:74,708,654...74,735,628
JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21295565) Ensembl
MGI
PMID:21295565 GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:137,949,100...138,054,553
Ensembl chr 5:144,056,387...144,078,001
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23661704) Ensembl
MGI
PMID:23661704 GO_REF:0000107 NCBI chr 5:5,470,841...5,651,360
Ensembl chr 5:5,150,365...5,329,556
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO (PMID:12657564)
(PMID:8675666)
MGI PMID:8675666 PMID:12657564 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16672320)
(PMID:14699151)
Ensembl
MGI
PMID:14699151 PMID:16672320 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15925496) Ensembl
MGI
PMID:15925496 GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17522159) Ensembl
MGI
PMID:17522159 GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G CD44 CD44 molecule (IN blood group) acts_upstream_of_or_within ISO (PMID:10926769) MGI PMID:10926769 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in
ISO PMID:15843474
(PMID:17615577)
UniProt PMID:15843474 PMID:17615577 RGD:8554075 NCBI chr  X:61,537,949...61,543,545
Ensembl chr  X:71,621,785...71,625,702
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (PMID:17615577) UniProt PMID:17615577 NCBI chr 6:137,134,142...137,136,550 JBrowse link
G CLSTN1 calsyntenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,495,571...8,591,613
Ensembl chr 1:9,724,743...9,774,760
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537789) Ensembl
MGI
PMID:17537789 GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17803964) Ensembl
MGI
PMID:17803964 GO_REF:0000107 Ensembl chr 1:9,846,511...9,882,049 JBrowse link
G DCHS1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21303848) Ensembl
MGI
PMID:21303848 GO_REF:0000107 NCBI chr11:6,753,383...6,787,896
Ensembl chr11:6,436,536...6,456,352
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17172448)
(PMID:17435047)
(PMID:16105026)
Ensembl
MGI
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 NCBI chr 3:194,386,263...194,648,015
Ensembl chr 3:204,323,724...204,584,987
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16937369) MGI PMID:16937369 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12783782) Ensembl
MGI
PMID:12783782 GO_REF:0000107 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21303848) Ensembl
MGI
PMID:21303848 GO_REF:0000107 NCBI chr 4:117,494,842...117,674,382
Ensembl chr 4:128,637,516...128,814,407
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:12631064) UniProt PMID:12631064 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16049111) Ensembl
MGI
PMID:16049111 GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916
JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within ISO (PMID:13678594) MGI PMID:13678594 NCBI chr 5:41,867,118...41,870,497 JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:13678594), (PMID:21281623) Ensembl
MGI
PMID:13678594 PMID:21281623 GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16396903) Ensembl
MGI
PMID:16396903 GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15925496) MGI
Ensembl
PMID:15925496 GO_REF:0000107 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29100091) Ensembl
MGI
PMID:29100091 GO_REF:0000107 NCBI chr18:14,482,493...14,763,789
Ensembl chr18:18,244,575...18,400,335
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14522971) Ensembl
MGI
PMID:14522971 GO_REF:0000107 NCBI chr20:23,302,958...23,316,469
Ensembl chr20:23,655,293...23,665,989
JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11493536) Ensembl
MGI
PMID:11493536 GO_REF:0000107 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103
JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:11493536) MGI PMID:11493536 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO (PMID:32017326) MGI PMID:32017326 NCBI chr17:38,047,573...38,155,543 JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,302,663...37,351,099 JBrowse link
G ILK integrin linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15831470) Ensembl
MGI
PMID:15831470 GO_REF:0000107 NCBI chr11:6,735,735...6,742,922
Ensembl chr11:6,418,717...6,425,788
JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14568553) Ensembl
MGI
PMID:14568553 GO_REF:0000107 NCBI chr20:58,673,850...58,677,760
Ensembl chr20:59,992,130...60,055,765
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19161241) UniProt PMID:19161241 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537792) Ensembl
MGI
PMID:17537792 GO_REF:0000107 NCBI chr 4:98,365,727...98,445,746
Ensembl chr 4:108,974,971...109,054,671
JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16672320) Ensembl
MGI
PMID:16672320 GO_REF:0000107 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12591246) Ensembl
MGI
PMID:12591246 GO_REF:0000107 NCBI chr 1:139,985,392...140,311,845
Ensembl chr 1:143,778,701...144,104,797
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (PMID:13678594) MGI PMID:13678594 NCBI chr14:55,494,152...55,508,066
Ensembl chr14:74,338,976...74,352,964
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (PMID:9491986) MGI PMID:9491986 NCBI chr19:5,396,022...5,398,108
Ensembl chr19:6,318,428...6,320,344
JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19809516) Ensembl
MGI
PMID:19809516 GO_REF:0000107 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of
involved_in
ISO (PMID:24550112)
(PMID:12482961)
MGI
UniProt
PMID:12482961 PMID:24550112 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16396903) Ensembl
MGI
PMID:16396903 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12783782) Ensembl
MGI
PMID:12783782 GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15925496) Ensembl
MGI
PMID:15925496 GO_REF:0000107 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISO (PMID:8787755) UniProt PMID:8787755 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TCF21 transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10572052)
(PMID:9507058)
Ensembl
MGI
PMID:9507058 PMID:10572052 GO_REF:0000107 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 RGD
MGI
PMID:10963667 RGD:2308864 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728
JBrowse link
G TMEM59L transmembrane protein 59 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,089,605...18,097,943
Ensembl chr19:19,059,660...19,067,669
JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11948913) Ensembl
MGI
PMID:11948913 GO_REF:0000107 NCBI chr2B:106,119,740...106,134,317
Ensembl chr2B:224,714,229...224,728,171
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (PMID:16054034) MGI PMID:16054034 NCBI chr17:10,616,957...10,651,954 JBrowse link
G WT1 WT1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chr 5:41,867,118...41,870,497 JBrowse link
distal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,582,234...10,618,507
Ensembl chr20:10,582,094...10,618,383
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,376,157...50,406,740
Ensembl chr 6:51,635,899...51,664,691
JBrowse link
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLHL3 kelch like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:133,005,563...133,276,087
Ensembl chr 5:139,147,793...139,248,919
JBrowse link
G WNK4 WNK lysine deficient protein kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,520,448...14,537,799
Ensembl chr17:14,746,365...14,762,423
JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22076439) Ensembl
MGI
PMID:22076439 GO_REF:0000107 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (PMID:19543268) MGI PMID:19543268 NCBI chr17:10,616,957...10,651,954 JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A3 collagen type IV alpha 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:114,410,703...114,559,336
Ensembl chr2B:233,294,783...233,371,021
JBrowse link
G COL4A4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10534397) Ensembl
MGI
PMID:10534397 GO_REF:0000107 NCBI chr2B:114,227,135...114,410,564
Ensembl chr2B:233,065,678...233,205,892
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18480751) Ensembl
MGI
PMID:18480751 GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G MPV17 mitochondrial inner membrane protein MPV17 involved_in ISO (PMID:16041630) UniProt PMID:16041630 NCBI chr2A:27,311,551...27,325,249
Ensembl chr2A:27,399,258...27,414,090
JBrowse link
G MYO1E myosin IE involved_in ISO (PMID:19005011) UniProt PMID:19005011 NCBI chr15:38,106,599...38,343,040
Ensembl chr15:56,413,570...56,649,722
JBrowse link
G NID1 nidogen 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14566019) Ensembl
MGI
PMID:14566019 GO_REF:0000107 NCBI chr 1:211,543,294...211,631,769
Ensembl chr 1:216,544,829...216,632,935
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,742,802...32,770,600
Ensembl chr19:41,492,444...41,518,471
JBrowse link
G SULF1 sulfatase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 8:65,992,961...66,194,112
Ensembl chr 8:67,744,801...67,848,704
JBrowse link
G SULF2 sulfatase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:43,992,927...44,122,598
Ensembl chr20:45,074,069...45,173,893
JBrowse link
G WT1 WT1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
glomerular capillary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G NOTCH2 notch receptor 2 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
G NOTCH3 notch receptor 3 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr19:14,692,571...14,733,758
Ensembl chr19:15,678,674...15,715,080
JBrowse link
glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD34 CD34 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,459,028...183,489,583
Ensembl chr 1:188,272,551...188,297,384
JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545
JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:139,815,336...139,879,600
Ensembl chr 4:151,476,356...151,536,497
JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:16498405) MGI PMID:16498405 NCBI chr16:67,237,476...67,239,545 JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,417,134...58,526,409
Ensembl chr17:63,511,784...63,579,067
JBrowse link
glomerular epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXC1 forkhead box C1 involved_in ISO (PMID:28223138) UniProt PMID:28223138 NCBI chr 6:1,429,051...1,433,180 JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA2 actin alpha 2, smooth muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:85,660,983...85,678,729
Ensembl chr10:89,164,344...89,182,080
JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:16498405) MGI PMID:16498405 NCBI chr16:67,237,476...67,239,545 JBrowse link
G GPR4 G protein-coupled receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17145776) Ensembl
MGI
PMID:17145776 GO_REF:0000107 NCBI chr19:42,594,996...42,608,032
Ensembl chr19:51,137,138...51,138,226
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 involved_in ISO PMID:18723570 UniProt PMID:18723570 RGD:8553351 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
glomerular parietal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:70,084,920...70,089,865
Ensembl chr17:75,638,634...75,641,666
JBrowse link
glomerular parietal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100982539 signal transducer CD24 involved_in ISO (PMID:19092120) UniProt PMID:19092120 NCBI chr 6:104,783,720...104,789,509
Ensembl chr 6:108,655,624...108,657,847
JBrowse link
G PROM1 prominin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:10,405,299...10,519,518
Ensembl chr 4:15,702,159...15,815,454
JBrowse link
glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN4 actinin alpha 4 involved_in ISO (PMID:12782671) UniProt PMID:12782671 NCBI chr19:35,742,758...35,825,321
Ensembl chr19:44,313,569...44,395,508
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8623928) Ensembl
MGI
PMID:8623928 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G C5 complement C5 acts_upstream_of_or_within ISO (PMID:16769899) MGI PMID:16769899 NCBI chr 9:92,069,574...92,202,513
Ensembl chr 9:120,426,354...120,523,856
JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25968128) Ensembl
MGI
PMID:25968128 GO_REF:0000107 NCBI chr 6:47,065,284...47,210,746
Ensembl chr 6:48,328,863...48,474,163
JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:15574507), (PMID:17517971)
(PMID:16769899), (PMID:20702729)
MGI PMID:15574507 PMID:16769899 PMID:17517971 PMID:20702729 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G COMT catechol-O-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22688335) Ensembl
MGI
PMID:22688335 GO_REF:0000107 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387
JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:139,815,336...139,879,600
Ensembl chr 4:151,476,356...151,536,497
JBrowse link
G ENPEP glutamyl aminopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:102,969,397...103,056,978
Ensembl chr 4:113,532,126...113,620,654
JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:38,913,549...38,929,798
Ensembl chr 1:40,240,118...40,256,933
JBrowse link
G MYO1E myosin IE involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:38,106,599...38,343,040
Ensembl chr15:56,413,570...56,649,722
JBrowse link
G PLCE1 phospholipase C epsilon 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:90,731,695...91,065,846
Ensembl chr10:94,278,550...94,575,024
JBrowse link
G PTPRO protein tyrosine phosphatase receptor type O involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,329,314...15,594,787
Ensembl chr12:15,725,917...15,990,532
JBrowse link
G TCF21 transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10572052) Ensembl
MGI
PMID:10572052 GO_REF:0000107 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:20843830) MGI PMID:20843830 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
G WT1 WT1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
G WWTR1 WW domain containing transcription regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18172001) Ensembl
MGI
PMID:18172001 GO_REF:0000107 NCBI chr 3:146,536,564...146,678,847
Ensembl chr 3:154,114,034...154,254,490
JBrowse link
glomerulus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:14644620) DFLAT PMID:14644620 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171
JBrowse link
G CTNND1 catenin delta 1 acts_upstream_of_or_within ISO (PMID:21521738) MGI PMID:21521738 NCBI chr11:53,000,582...53,058,054
Ensembl chr11:56,470,174...56,527,593
JBrowse link
G KIRREL3 kirre like nephrin family adhesion molecule 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23637329) Ensembl
MGI
PMID:23637329 GO_REF:0000107 NCBI chr11:121,236,962...121,821,806
Ensembl chr11:125,146,563...125,723,504
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:20181743) UniProt PMID:20181743 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 involved_in ISO (PMID:20181743) UniProt PMID:20181743 NCBI chr 8:121,235,545...121,413,037
Ensembl chr 8:123,987,577...124,032,339
JBrowse link
glomerulus vasculature development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPT1 angiopoietin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11507774) Ensembl
MGI
PMID:11507774 GO_REF:0000107 NCBI chr 8:103,893,234...104,137,661
Ensembl chr 8:106,042,041...106,286,783
JBrowse link
G ANGPT2 angiopoietin 2 involved_in ISO PMID:20056745 UniProt PMID:20056745 RGD:8554659 NCBI chr 8:718,367...782,534
Ensembl chr 8:6,506,014...6,566,915
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G TEK TEK receptor tyrosine kinase involved_in ISO PMID:20056745 UniProt PMID:20056745 RGD:8554659 NCBI chr 9:26,955,339...27,077,809
Ensembl chr 9:27,561,421...27,683,572
JBrowse link
loop of Henle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,582,234...10,618,507
Ensembl chr20:10,582,094...10,618,383
JBrowse link
G UMOD uromodulin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15522986) Ensembl
MGI
PMID:15522986 GO_REF:0000107 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121
JBrowse link
mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of
IEA
ISO
(PMID:9056639) Ensembl
MGI
PMID:9056639 GO_REF:0000107 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021
JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:24550112) MGI PMID:24550112 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
mesenchymal stem cell maintenance involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (PMID:21350016) MGI PMID:21350016 NCBI chr17:10,616,957...10,651,954 JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor involved_in ISO (PMID:16396903) UniProt PMID:16396903 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17522159) UniProt PMID:17522159 NCBI chr15:11,213,870...11,230,619 JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:10322633) UniProt PMID:10322633 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:24550112) Ensembl
MGI
PMID:24550112 GO_REF:0000107 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (PMID:16054034) MGI PMID:16054034 NCBI chr17:10,616,957...10,651,954 JBrowse link
mesonephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11180950) MGI
Ensembl
PMID:11180950 GO_REF:0000107 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (PMID:17300925) UniProt PMID:17300925 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
metanephric ascending thin limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr16:604,366...605,560 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr2A:96,967,943...96,972,378 JBrowse link
G UMOD uromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121
JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G WT1 WT1 transcription factor involved_in ISO (PMID:18618131) UniProt PMID:18618131 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
metanephric connecting tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr2A:96,967,943...96,972,378 JBrowse link
metanephric descending thin limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:18618131) UniProt PMID:18618131 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141
JBrowse link
metanephric distal convoluted tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G UMOD uromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121
JBrowse link
metanephric distal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr16:604,366...605,560 JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16886065), (PMID:7670489) Ensembl
MGI
PMID:7670489 PMID:16886065 GO_REF:0000107 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (PMID:11239463) UniProt PMID:11239463 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G TCF21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B involved_in ISO (PMID:9693135) UniProt PMID:9693135 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B involved_in ISO (PMID:15084468) UniProt PMID:15084468 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD34 CD34 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,459,028...183,489,583
Ensembl chr 1:188,272,551...188,297,384
JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B involved_in ISO (PMID:9693135) UniProt PMID:9693135 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (PMID:9693135) UniProt PMID:9693135 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (PMID:9693135) UniProt PMID:9693135 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
metanephric glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
metanephric glomerulus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta involved_in ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
metanephric glomerulus vasculature development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:18618131) UniProt PMID:18618131 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
metanephric loop of Henle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr2A:96,967,943...96,972,378 JBrowse link
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (PMID:19060336) MGI PMID:19060336 Ensembl chr22:44,988,647...45,044,841 JBrowse link
metanephric macula densa development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr2A:96,967,943...96,972,378 JBrowse link
metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chr 5:41,867,118...41,870,497 JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:7555706) UniProt PMID:7555706 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,376,157...50,406,740
Ensembl chr 6:51,635,899...51,664,691
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18346943) Ensembl
MGI
PMID:18346943 GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19830824) Ensembl
MGI
PMID:19830824 GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
metanephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:21212101) MGI PMID:21212101
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:21212101) MGI PMID:21212101 NCBI chr17:66,028,737...66,034,122 JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15465493) UniProt PMID:15465493 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16886065) Ensembl
MGI
PMID:16886065 GO_REF:0000107 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:155,038,753...155,064,332 JBrowse link
metanephric proximal convoluted tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:7733320 RGD:2326090 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
metanephric proximal convoluted tubule segment 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:18618131) UniProt PMID:18618131 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141
JBrowse link
metanephric proximal straight tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:18618131) UniProt PMID:18618131 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141
JBrowse link
metanephric proximal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANPEP alanyl aminopeptidase, membrane ISO RGD PMID:30645697 RGD:155631307 NCBI chr15:68,479,349...68,509,238
Ensembl chr15:87,681,826...87,703,713
JBrowse link
G AQP1 aquaporin 1 (Colton blood group) ISO RGD PMID:30645697 RGD:155631307 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141
JBrowse link
G LRP2 LDL receptor related protein 2 ISO RGD PMID:30645697 RGD:155631307 NCBI chr2B:56,407,871...56,640,471
Ensembl chr2B:173,873,767...174,103,697
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr16:604,366...605,560 JBrowse link
G SLC15A1 solute carrier family 15 member 1 ISO RGD PMID:30645697 RGD:155631307 NCBI chr13:79,855,805...79,902,215
Ensembl chr13:98,998,894...99,065,008
JBrowse link
G SLC15A2 solute carrier family 15 member 2 ISO RGD PMID:30645697 RGD:155631307 NCBI chr 3:118,996,023...119,044,423
Ensembl chr 3:125,902,978...125,951,963
JBrowse link
G SLC22A1 solute carrier family 22 member 1 ISO RGD PMID:30645697 RGD:155631307 NCBI chr 6:158,004,545...158,046,428
Ensembl chr 6:163,014,663...163,054,681
JBrowse link
G SLC22A6 solute carrier family 22 member 6 ISO RGD PMID:30645697 RGD:155631307 NCBI chr11:58,328,476...58,336,887
Ensembl chr11:61,680,016...61,688,223
JBrowse link
G SLC2A5 solute carrier family 2 member 5 ISO RGD PMID:30645697 RGD:155631307 NCBI chr 1:7,792,361...7,840,634
Ensembl chr 1:9,028,790...9,078,509
JBrowse link
G SLC4A4 solute carrier family 4 member 4 ISO RGD PMID:30645697 RGD:155631307 NCBI chr 4:52,659,221...52,994,053
Ensembl chr 4:59,002,200...59,385,608
JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G WT1 WT1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
metanephric thick ascending limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU3F3 POU class 3 homeobox 3 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr2A:96,967,943...96,972,378 JBrowse link
G UMOD uromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121
JBrowse link
negative regulation of apoptotic process involved in metanephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21281623) Ensembl
MGI
PMID:21281623 GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISO (PMID:22194864) UniProt PMID:22194864 NCBI chr 1:57,838,661...57,841,444
Ensembl chr 1:59,545,625...59,546,596
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
negative regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021
JBrowse link
G IFNG interferon gamma ISO RGD PMID:1906384 RGD:10755757 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
negative regulation of glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9056639) Ensembl
MGI
PMID:9056639 GO_REF:0000107 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021
JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:61,537,949...61,543,545
Ensembl chr  X:71,621,785...71,625,702
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537789) Ensembl
MGI
PMID:17537789 GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:24550112) MGI PMID:24550112 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WT1 WT1 transcription factor involved_in ISO (PMID:10077614) UniProt PMID:10077614 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
negative regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
nephrogenic mesenchyme development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chr 5:41,867,118...41,870,497 JBrowse link
nephrogenic mesenchyme morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021
JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359
JBrowse link
nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11948913) Ensembl
MGI
PMID:11948913 GO_REF:0000107 NCBI chr2B:106,119,740...106,134,317
Ensembl chr2B:224,714,229...224,728,171
JBrowse link
nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:20181743) UniProt PMID:20181743 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 involved_in ISO (PMID:20181743) UniProt PMID:20181743 NCBI chr 8:121,235,545...121,413,037
Ensembl chr 8:123,987,577...124,032,339
JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537789) Ensembl
MGI
PMID:17537789 GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11948913) Ensembl
MGI
PMID:11948913 GO_REF:0000107 NCBI chr2B:106,119,740...106,134,317
Ensembl chr2B:224,714,229...224,728,171
JBrowse link
nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (PMID:19543268) MGI PMID:19543268 NCBI chr17:10,616,957...10,651,954 JBrowse link
podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25361754) MGI
Ensembl
PMID:25361754 GO_REF:0000107 NCBI chr 1:111,997,440...112,009,662
Ensembl chr 1:111,225,522...111,237,778
JBrowse link
G ASXL1 ASXL transcriptional regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:28,647,004...28,727,865
Ensembl chr20:29,774,582...29,850,453
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,582,234...10,618,507
Ensembl chr20:10,582,094...10,618,383
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 7:69,943,704...71,395,176
Ensembl chr 7:83,758,512...84,760,872
JBrowse link
G MYO1E myosin IE involved_in ISO (PMID:19005011) UniProt PMID:19005011 NCBI chr15:38,106,599...38,343,040
Ensembl chr15:56,413,570...56,649,722
JBrowse link
G NOTCH2 notch receptor 2 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,742,802...32,770,600
Ensembl chr19:41,492,444...41,518,471
JBrowse link
G PODXL podocalyxin like involved_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 7:123,467,140...123,523,503
Ensembl chr 7:135,984,592...135,992,815
JBrowse link
G WT1 WT1 transcription factor involved_in ISO (PMID:18618131) UniProt PMID:18618131 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
podocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BASP1 brain abundant membrane attached signal protein 1 involved_in ISO (PMID:19050011) UniProt PMID:19050011 NCBI chr 5:17,521,054...17,580,999 JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25968128) Ensembl
MGI
PMID:25968128 GO_REF:0000107 NCBI chr 6:47,065,284...47,210,746
Ensembl chr 6:48,328,863...48,474,163
JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545
JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:139,815,336...139,879,600
Ensembl chr 4:151,476,356...151,536,497
JBrowse link
G EDNRB endothelin receptor type B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:59,112,349...59,136,615
Ensembl chr13:78,153,020...78,177,286
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:18480751) Ensembl
MGI
PMID:18480751 GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:16498405) MGI PMID:16498405 NCBI chr16:67,237,476...67,239,545 JBrowse link
G KLF15 KLF transcription factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:123,395,678...123,410,514
Ensembl chr 3:130,712,599...130,724,530
JBrowse link
G LOC100982539 signal transducer CD24 involved_in ISO (PMID:19092120) UniProt PMID:19092120 NCBI chr 6:104,783,720...104,789,509
Ensembl chr 6:108,655,624...108,657,847
JBrowse link
G PROM1 prominin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:10,405,299...10,519,518
Ensembl chr 4:15,702,159...15,815,454
JBrowse link
G PTPRO protein tyrosine phosphatase receptor type O involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:15,329,314...15,594,787
Ensembl chr12:15,725,917...15,990,532
JBrowse link
G WT1 WT1 transcription factor involved_in ISO (PMID:19050011) UniProt PMID:19050011 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380
JBrowse link
G AGTR2 angiotensin II receptor type 2 involved_in ISO PMID:17537984
(PMID:18607644)
UniProt PMID:17537984 PMID:18607644 RGD:1643596 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO (PMID:17522159)
(PMID:21281623)
MGI
UniProt
PMID:17522159 PMID:21281623 NCBI chr15:11,213,870...11,230,619 JBrowse link
G HOXB7 homeobox B7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:8,925,717...8,929,523
Ensembl chr17:9,110,864...9,114,639
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G LOC100981746 homeobox protein SIX4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (PMID:19268530) UniProt PMID:19268530 NCBI chr  X:43,999,576...44,098,848
Ensembl chr  X:51,984,080...51,992,850
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092
JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:17314325), (PMID:17881463) UniProt PMID:17314325 PMID:17881463 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:24550112) MGI PMID:24550112 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21281623) Ensembl
MGI
PMID:21281623 GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISO (PMID:16396903) UniProt PMID:16396903 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in ISO (PMID:21212101) UniProt PMID:21212101
G SOX9 SRY-box transcription factor 9 involved_in ISO (PMID:21212101) UniProt PMID:21212101 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11507767) Ensembl
MGI
PMID:11507767 GO_REF:0000107 NCBI chr 1:115,119,360...115,177,942
Ensembl chr 1:125,173,906...125,230,675
JBrowse link
positive regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3AR1 complement C3a receptor 1 ISO RGD PMID:23713944 RGD:7411623 NCBI chr12:8,178,064...8,186,206
Ensembl chr12:8,220,933...8,222,381
JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator ISO RGD PMID:24691542 RGD:11341715 NCBI chr2B:88,373,057...88,429,959
Ensembl chr2B:206,528,943...206,577,045
JBrowse link
G IL6R interleukin 6 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:129,761,914...129,824,386
Ensembl chr 1:133,374,078...133,433,089
JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:20135641 RGD:4892623 NCBI chr17:10,134,450...10,194,596
Ensembl chr17:10,353,111...10,392,382
JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PDGFD platelet derived growth factor D ISO RGD PMID:12937299 RGD:9854637 NCBI chr11:98,852,652...99,110,147
Ensembl chr11:102,357,079...102,593,273
JBrowse link
G SERPINB7 serpin family B member 7 ISO RGD PMID:21945418 RGD:7207383 NCBI chr18:57,112,242...57,164,213
Ensembl chr18:60,445,135...60,475,165
JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 involved_in ISO PMID:8910451 UniProt PMID:8910451 RGD:8553929 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
positive regulation of glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:93,447,095...93,770,339
Ensembl chr 4:104,113,520...104,435,394
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G LIF LIF interleukin 6 family cytokine involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608
JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:12435636) UniProt PMID:12435636 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
positive regulation of metanephric glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 involved_in ISO (PMID:18607644) UniProt PMID:18607644 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:17047028) UniProt PMID:17047028 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G RET ret proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331
JBrowse link
positive regulation of metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:183,876,051...183,889,723
Ensembl chr 3:192,341,320...192,354,885
JBrowse link
positive regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G LOC100982539 signal transducer CD24 involved_in ISO (PMID:16885410) UniProt PMID:16885410 NCBI chr 6:104,783,720...104,789,509
Ensembl chr 6:108,655,624...108,657,847
JBrowse link
G PROM1 prominin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:10,405,299...10,519,518
Ensembl chr 4:15,702,159...15,815,454
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G LOC100981746 homeobox protein SIX4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LZTS2 leucine zipper tumor suppressor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21949185) Ensembl
MGI
PMID:21949185 GO_REF:0000107 NCBI chr10:97,598,337...97,609,124
Ensembl chr10:101,076,884...101,084,724
JBrowse link
pronephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC61A1 SEC61 translocon subunit alpha 1 involved_in ISO (PMID:27392076) UniProt PMID:27392076 NCBI chr 3:125,091,916...125,111,238
Ensembl chr 3:132,457,005...132,476,935
JBrowse link
pronephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
proximal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP11 aquaporin 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18701606) Ensembl
MGI
PMID:18701606 GO_REF:0000107 NCBI chr11:72,653,721...72,673,698
Ensembl chr11:76,295,778...76,315,292
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:38,913,549...38,929,798
Ensembl chr 1:40,240,118...40,256,933
JBrowse link
G NOTCH2 notch receptor 2 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
proximal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMMD5 COMM domain containing 5 involved_in ISO PMID:24515317 UniProt PMID:24515317 RGD:10047245 NCBI chr 8:141,623,725...141,627,532
Ensembl chr 8:144,604,718...144,605,392
JBrowse link
G CTNS cystinosin, lysosomal cystine transporter ISO RGD PMID:35695380 RGD:155630629 NCBI chr17:3,686,903...3,711,857
Ensembl chr17:3,683,575...3,708,253
JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,922,252...3,927,836
Ensembl chr 5:3,610,225...3,615,279
JBrowse link
G IRX2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chr 5:3,081,361...3,087,014 JBrowse link
proximal/distal pattern formation involved in nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:34,514,107...34,517,576
Ensembl chr16:53,622,409...53,624,653
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
G LOC100981746 homeobox protein SIX4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A NOT|involved_in ISO (PMID:11788434) UniProt PMID:11788434 NCBI chr 7:648,722...672,023 JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (PMID:16054034) MGI PMID:16054034 NCBI chr17:10,616,957...10,651,954 JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23974041) Ensembl
MGI
PMID:23974041 GO_REF:0000107 NCBI chr 4:117,494,842...117,674,382
Ensembl chr 4:128,637,516...128,814,407
JBrowse link
G LIF LIF interleukin 6 family cytokine involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608
JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G WWTR1 WW domain containing transcription regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23974041) Ensembl
MGI
PMID:23974041 GO_REF:0000107 NCBI chr 3:146,536,564...146,678,847
Ensembl chr 3:154,114,034...154,254,490
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23974041) Ensembl
MGI
PMID:23974041 GO_REF:0000107 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301
JBrowse link
regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor involved_in ISO PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
renal vesicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201
JBrowse link
renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537789) Ensembl
MGI
PMID:17537789 GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
renal vesicle induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX8 SRY-box transcription factor 8 involved_in ISO (PMID:21212101) UniProt PMID:21212101
G SOX9 SRY-box transcription factor 9 involved_in ISO (PMID:21212101) UniProt PMID:21212101 NCBI chr17:66,028,737...66,034,122 JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11507767) Ensembl
MGI
PMID:11507767 GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
renal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
renal vesicle progenitor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16937369) MGI PMID:16937369 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G IRX1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,922,252...3,927,836
Ensembl chr 5:3,610,225...3,615,279
JBrowse link
G IRX2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chr 5:3,081,361...3,087,014 JBrowse link
G IRX3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:34,514,107...34,517,576
Ensembl chr16:53,622,409...53,624,653
JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17522159) UniProt PMID:17522159 NCBI chr15:11,213,870...11,230,619 JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9637690) Ensembl
MGI
PMID:9637690 GO_REF:0000107 NCBI chr 1:119,432,583...119,630,472
Ensembl chr 1:88,283,872...88,475,198
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMN1 formin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7517224) Ensembl
MGI
PMID:7517224 GO_REF:0000107 NCBI chr15:11,271,794...11,698,539
Ensembl chr15:30,114,113...30,495,909
JBrowse link
G KIF26B kinesin family member 26B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20439720) Ensembl
MGI
PMID:20439720 GO_REF:0000107 NCBI chr 1:220,756,171...221,321,969
Ensembl chr 1:226,343,821...226,681,669
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within
involved_in
ISO (PMID:16839447)
(PMID:11688560), (PMID:16839447)
MGI
UniProt
PMID:11688560 PMID:16839447 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISO (PMID:22194864) UniProt PMID:22194864 NCBI chr 1:57,838,661...57,841,444
Ensembl chr 1:59,545,625...59,546,596
JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19380
    developmental process 6649
      anatomical structure development 6235
        nephron development 184
          extraglomerular mesangial cell proliferation + 0
          glomerulus development + 80
          long nephron development + 0
          mesonephric nephron development + 1
          metanephric nephron development + 42
          nephrogenic mesenchyme development + 3
          nephron epithelium development + 139
          nephron morphogenesis + 92
          pronephric nephron development + 2
          proximal/distal pattern formation involved in nephron development + 5
          short nephron development + 0
Path 2
Term Annotations click to browse term
  biological_process 19380
    developmental process 6649
      anatomical structure development 6235
        multicellular organism development 5009
          system development 4352
            renal system development 405
              kidney development 391
                nephron development 184
                  extraglomerular mesangial cell proliferation + 0
                  glomerulus development + 80
                  long nephron development + 0
                  mesonephric nephron development + 1
                  metanephric nephron development + 42
                  nephrogenic mesenchyme development + 3
                  nephron epithelium development + 139
                  nephron morphogenesis + 92
                  pronephric nephron development + 2
                  proximal/distal pattern formation involved in nephron development + 5
                  short nephron development + 0
paths to the root