ONTOLOGY REPORT - ANNOTATIONS
Term: cellular response to radiation
Accession: GO:0071478
browse the term
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
Comment: Note that 'radiation' refers to electromagnetic radiation of any wavelength.
Synonyms: exact_synonym: cellular response to electromagnetic radiation stimulus; cellular response to radiation stimulus
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Hsf1
heat shock transcription factor 1
IDA
microwave
RGD
PMID:21241601
RGD:10403031
NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
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Irs1
insulin receptor substrate 1
IEP
RGD
PMID:17427956
RGD:10045897
NCBI chr 9:83,552,964...83,605,797
Ensembl chr 9:83,548,944...83,606,122
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Mtch2
mitochondrial carrier 2
acts_upstream_of_or_within
ISO
MGI:2449949|MGI:5566664 (PMID:26219591)
RGD
PMID:26219591
NCBI chr 3:76,830,549...76,850,189
Ensembl chr 3:76,830,413...76,850,189
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Nsmce3
NSE3 homolog, SMC5-SMC6 complex component
involved_in
ISO
(PMID:27427983)
RGD
PMID:27427983
NCBI chr 1:118,401,302...118,402,629
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Atm
ATM serine/threonine kinase
involved_in
ISO
(PMID:16213212), (PMID:9925639)
RGD
PMID:9925639 PMID:16213212
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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Atr
ATR serine/threonine kinase
involved_in
ISO IEA
(PMID:9925639) GO_REF:0000107
RGD Ensembl
PMID:9925639
GO_REF:0000107
NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
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Bcl2l1
Bcl2-like 1
acts_upstream_of_or_within
ISO
(PMID:15231831)
RGD
PMID:15231831
NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 Ensembl chr 1:141,253,523...141,303,479
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Cdkn1a
cyclin-dependent kinase inhibitor 1A
acts_upstream_of_or_within
ISO
(PMID:10710310)
RGD
PMID:10710310
NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585
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Cdkn2a
cyclin-dependent kinase inhibitor 2A
involved_in
ISO
(PMID:19057511)
RGD
PMID:19057511
NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149
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Chek2
checkpoint kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2386905 (PMID:10710310) GO_REF:0000107
RGD Ensembl
PMID:10710310
GO_REF:0000107
NCBI chr12:51,448,838...51,481,159
Ensembl chr12:45,788,827...45,821,286
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Cryab
crystallin, alpha B
acts_upstream_of_or_within
ISO IEA
(PMID:23542032) GO_REF:0000107
RGD Ensembl
PMID:23542032
GO_REF:0000107
NCBI chr 8:59,989,885...59,995,532
Ensembl chr 8:51,093,441...51,099,157
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Cyba
cytochrome b-245 alpha chain
IEP
RGD
PMID:18640264
RGD:2317861
NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721
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Ddias
DNA damage-induced apoptosis suppressor
acts_upstream_of_or_within
ISO
(PMID:17515607)
RGD
PMID:17515607
NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462
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Egr1
early growth response 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19057511)
Ensembl RGD
PMID:19057511
GO_REF:0000107
NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766
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Elk1
ETS transcription factor ELK1
IDA
RGD
PMID:17949253
RGD:7488908
NCBI chr X:1,138,826...1,155,713
Ensembl chr X:1,139,756...1,155,713
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Gtf2h5
general transcription factor IIH subunit 5
acts_upstream_of_or_within
ISO
MGI:5514340 (PMID:23637614)
RGD
PMID:23637614
NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
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H2ax
H2A.X variant histone
IDA
RGD
PMID:17552875
RGD:8693710
NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 Ensembl chr 4:44,671,786...44,673,239
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Hras
HRas proto-oncogene, GTPase
involved_in
ISO
(PMID:16213212)
RGD
PMID:16213212
NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
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Hsf1
heat shock transcription factor 1
involved_in
ISO IEA
(PMID:26359349) GO_REF:0000107
RGD Ensembl
PMID:26359349
GO_REF:0000107
NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
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Hspa5
heat shock protein family A (Hsp70) member 5
IEP
RGD
PMID:20470193
RGD:11354917
NCBI chr 3:38,453,016...38,457,475
Ensembl chr 3:18,055,405...18,059,891
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Kdm1a
lysine demethylase 1A
acts_upstream_of_or_within
ISO IEA
(PMID:24217620) GO_REF:0000107
RGD Ensembl
PMID:24217620
GO_REF:0000107
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
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Map3k20
mitogen-activated protein kinase kinase kinase 20
involved_in
ISO IEA
(PMID:11836244) GO_REF:0000107
RGD Ensembl
PMID:11836244
GO_REF:0000107
NCBI chr 3:57,130,539...57,289,943
Ensembl chr 3:57,130,551...57,289,626
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Mdm2
MDM2 proto-oncogene
involved_in
ISO IEA
(PMID:16213212) GO_REF:0000107
RGD Ensembl
PMID:16213212
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
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Mir21
microRNA 21
involved_in
ISO
(PMID:19826040)
RGD
PMID:19826040
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
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Nox4
NADPH oxidase 4
IEP
RGD
PMID:18640264
RGD:2317861
NCBI chr 1:140,900,886...141,078,844
Ensembl chr 1:140,901,097...141,077,406
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Rad51
RAD51 recombinase
IEP
RGD
PMID:9885240
RGD:9831175
NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
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Rnf4
ring finger protein 4
IMP
RGD
PMID:22661230
RGD:9480235
NCBI chr14:80,625,864...80,647,138
Ensembl chr14:76,401,299...76,422,566
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Rpl13a
ribosomal protein L13A
IEP
RGD
PMID:10483362
RGD:11036101
NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
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Rpl26
ribosomal protein L26
involved_in
ISO
(PMID:16213212)
RGD
PMID:16213212
NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
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Tlk2
tousled-like kinase 2
involved_in
ISO
(PMID:12660173)
RGD
PMID:12660173
NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561
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Tmem109
transmembrane protein 109
acts_upstream_of_or_within involved_in
ISO IEA IBA
(PMID:23542032) GO_REF:0000107 GO_REF:0000033 GO_REF:0000002
RGD Ensembl GO_Central InterPro
PMID:23542032
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr 1:207,519,628...207,530,245
Ensembl chr 1:207,519,624...207,530,215
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Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:16213212) GO_REF:0000107 (PMID:10710310)
RGD Ensembl
PMID:10710310 PMID:16213212
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
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Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO IEA
(PMID:18045533) GO_REF:0000107
RGD Ensembl
PMID:18045533
GO_REF:0000107
NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
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Tspyl5
TSPY-like 5
involved_in
ISO
(PMID:20079711)
RGD
PMID:20079711
NCBI chr 7:64,881,504...64,885,512
Ensembl chr 7:64,884,225...64,885,457
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Wrn
WRN RecQ like helicase
involved_in
ISO
(PMID:21639834)
RGD
PMID:21639834
NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
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Xrcc5
X-ray repair cross complementing 5
involved_in
ISO
(PMID:26359349)
RGD
PMID:26359349
NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
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Xrcc6
X-ray repair cross complementing 6
involved_in
ISO IEA
(PMID:26359349) GO_REF:0000107
RGD Ensembl
PMID:26359349
GO_REF:0000107
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
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Yap1
Yes1 associated transcriptional regulator
involved_in
ISO IEA ISS
(PMID:18280240) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18280240
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO IEA
MGI:2180033 (PMID:15980864) GO_REF:0000107
RGD Ensembl
PMID:15980864
GO_REF:0000107
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
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Akt2
AKT serine/threonine kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2158456 (PMID:17202487) GO_REF:0000107
RGD Ensembl
PMID:17202487
GO_REF:0000107
NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:82,883,547...82,933,817
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Slc24a2
solute carrier family 24 member 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 5:101,497,916...101,741,840
Ensembl chr 5:101,502,278...101,739,337
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Slc24a4
solute carrier family 24 member 4
involved_in
ISO IEA
(PMID:28650316) GO_REF:0000107
RGD Ensembl
PMID:28650316
GO_REF:0000107
NCBI chr 6:121,279,590...121,419,811
Ensembl chr 6:121,280,031...121,414,949
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Atm
ATM serine/threonine kinase
IMP
RGD
PMID:28007901
RGD:12879399
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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Babam2
BRISC and BRCA1 A complex member 2
involved_in
ISO IEA
(PMID:14636569) GO_REF:0000107
RGD Ensembl
PMID:14636569
GO_REF:0000107
NCBI chr 6:24,369,021...24,788,416
Ensembl chr 6:24,369,022...24,833,951
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Bard1
BRCA1 associated RING domain 1
involved_in
ISO IEA
(PMID:14636569) GO_REF:0000107
RGD Ensembl
PMID:14636569
GO_REF:0000107
NCBI chr 9:80,069,960...80,144,167
Ensembl chr 9:72,623,155...72,694,265
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Bbc3
Bcl-2 binding component 3
acts_upstream_of_or_within
ISO
MGI:1096393|MGI:98834 (PMID:16286009)
RGD
PMID:16286009
NCBI chr 1:86,141,450...86,150,666
Ensembl chr 1:77,014,543...77,022,509
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Blm
BLM RecQ like helicase
involved_in
ISO IEA
(PMID:23509288) GO_REF:0000107
RGD Ensembl
PMID:23509288
GO_REF:0000107
NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
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Brca1
BRCA1, DNA repair associated
involved_in
ISO
(PMID:14636569)
RGD
PMID:14636569
NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304
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Brca2
BRCA2, DNA repair associated
involved_in
ISO
(PMID:14636569)
RGD
PMID:14636569
NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567
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Brcc3
BRCA1/BRCA2-containing complex subunit 3
involved_in
ISO
(PMID:14636569)
RGD
PMID:14636569
NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
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Cdkn1a
cyclin-dependent kinase inhibitor 1A
involved_in
ISO
(PMID:20160708)
RGD
PMID:20160708
NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585
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Clock
clock circadian regulator
involved_in
IEA ISO
GO_REF:0000107 (PMID:21659603)
Ensembl RGD
PMID:21659603
GO_REF:0000107
NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400
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Ect2
epithelial cell transforming 2
involved_in
ISO IEA
(PMID:21373644) GO_REF:0000107
RGD Ensembl
PMID:21373644
GO_REF:0000107
NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
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Eef1d
eukaryotic translation elongation factor 1 delta
involved_in
ISO IEA
(PMID:8168075) GO_REF:0000107
RGD Ensembl
PMID:8168075
GO_REF:0000107
NCBI chr 7:107,581,930...107,596,735
Ensembl chr 7:107,581,930...107,608,799
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Fbxo4
F-box protein 4
acts_upstream_of_or_within
ISO IEA
(PMID:21911473) GO_REF:0000107
RGD Ensembl
PMID:21911473
GO_REF:0000107
NCBI chr 2:54,902,394...54,915,388
Ensembl chr 2:53,174,798...53,187,792
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Fignl1
fidgetin-like 1
involved_in
ISO ISS
(PMID:23754376) GO_REF:0000024
RGD UniProt
PMID:23754376
GO_REF:0000024
NCBI chr14:86,368,670...86,381,728
Ensembl chr14:86,368,675...86,377,455
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Gadd45a
growth arrest and DNA-damage-inducible, alpha
involved_in
IEA ISO
GO_REF:0000107 (PMID:20160708)
Ensembl RGD
PMID:20160708
GO_REF:0000107
NCBI chr 4:97,484,497...97,486,799
Ensembl chr 4:96,154,789...96,157,115
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Grb2
growth factor receptor bound protein 2
involved_in
ISO IEA
(PMID:20160708) GO_REF:0000107
RGD Ensembl
PMID:20160708
GO_REF:0000107
NCBI chr10:100,881,404...100,949,193
Ensembl chr10:100,869,718...100,949,309
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Hus1
HUS1 checkpoint clamp component
involved_in
ISO IEA
(PMID:21659603) GO_REF:0000107
RGD Ensembl
PMID:21659603
GO_REF:0000107
NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442
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Ino80
INO80 complex ATPase subunit
involved_in
ISO IEA
(PMID:20687897) GO_REF:0000107
RGD Ensembl
PMID:20687897
GO_REF:0000107
NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
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Ints7
integrator complex subunit 7
involved_in
ISO
(PMID:21659603)
RGD
PMID:21659603
NCBI chr13:103,155,123...103,207,953
Ensembl chr13:103,155,090...103,208,592
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Itgb1
integrin subunit beta 1
IEP
RGD
PMID:19714308
RGD:2312872
NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195
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Itgb6
integrin subunit beta 6
acts_upstream_of_or_within
ISO IEA
(PMID:17916808) GO_REF:0000107
RGD Ensembl
PMID:17916808
GO_REF:0000107
NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671
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Kdm4d
lysine demethylase 4D
acts_upstream_of_or_within
ISO
(PMID:24550317)
RGD
PMID:24550317
NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290
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Lig4
DNA ligase 4
involved_in
ISO
UniProtKB:G5EGA3 (PMID:29463814)
RGD
PMID:29463814
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
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Mapk14
mitogen activated protein kinase 14
involved_in
ISO IEA
(PMID:20160708) GO_REF:0000107
RGD Ensembl
PMID:20160708
GO_REF:0000107
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
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Mfn2
mitofusin 2
IEP
RGD
PMID:26415228
RGD:13204741
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
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Mgmt
O-6-methylguanine-DNA methyltransferase
IEP
RGD
PMID:9780001
RGD:2316946
NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756
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Mir21
microRNA 21
involved_in
ISO
(PMID:22836756)
RGD
PMID:22836756
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
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Nampt
nicotinamide phosphoribosyltransferase
IEP
RGD
PMID:27681750
RGD:13781886
NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
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Net1
neuroepithelial cell transforming 1
involved_in
ISO
(PMID:21373644)
RGD
PMID:21373644
NCBI chr17:66,341,251...66,370,445
Ensembl chr17:66,340,728...66,370,441
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Rad1
RAD1 checkpoint DNA exonuclease
involved_in
ISO IEA
(PMID:21659603) GO_REF:0000107
RGD Ensembl
PMID:21659603
GO_REF:0000107
NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689
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Rad51
RAD51 recombinase
involved_in
ISO IEA
(PMID:14636569), (PMID:23509288), (PMID:23754376) GO_REF:0000107
RGD Ensembl
PMID:14636569 PMID:23509288 PMID:23754376
GO_REF:0000107
NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
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Rad51ap1
RAD51 associated protein 1
involved_in
ISO IEA
(PMID:23754376) GO_REF:0000107
RGD Ensembl
PMID:23754376
GO_REF:0000107
NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524
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Rad9a
RAD9 checkpoint clamp component A
involved_in
ISO IBA
(PMID:21659603) GO_REF:0000033
RGD GO_Central
PMID:21659603
GO_REF:0000033
NCBI chr 1:210,917,970...210,983,038
Ensembl chr 1:201,487,136...201,553,608
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Rad9b
RAD9 checkpoint clamp component B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372
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Rhno1
RAD9-HUS1-RAD1 interacting nuclear orphan 1
involved_in
ISO IEA
(PMID:21659603) GO_REF:0000002
RGD InterPro
PMID:21659603
GO_REF:0000002
NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371
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Rhob
ras homolog family member B
involved_in
ISO IEA ISS
(PMID:21373644) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:21373644
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:37,083,030...37,085,204
Ensembl chr 6:31,363,548...31,366,108
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Rpl26
ribosomal protein L26
involved_in
ISO
(PMID:16213212)
RGD
PMID:16213212
NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
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Sirt1
sirtuin 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:17612497)
Ensembl RGD
PMID:17612497
GO_REF:0000107
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
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Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within
ISO
MGI:2181667|MGI:98834 (PMID:16286009)
RGD
PMID:16286009
NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200
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Spidr
scaffold protein involved in DNA repair
involved_in
ISO
(PMID:23509288), (PMID:23754376)
RGD
PMID:23509288 PMID:23754376
NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600
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Swi5
SWI5 homologous recombination repair protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:23754376)
UniProt RGD
PMID:23754376
GO_REF:0000024
NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805
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Tank
TRAF family member-associated NFKB activator
involved_in
ISO IEA
(PMID:25861989) GO_REF:0000107
RGD Ensembl
PMID:25861989
GO_REF:0000107
NCBI chr 3:46,114,230...46,190,270
Ensembl chr 3:46,114,274...46,190,264
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
IEP IEA ISO
GO_REF:0000107 MGI:3513111 (PMID:17916808)
Ensembl RGD
PMID:17916808 PMID:25600523
GO_REF:0000107, RGD:11073671
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tnf
tumor necrosis factor
involved_in
ISO IEA
(PMID:22836756) GO_REF:0000107
RGD Ensembl
PMID:22836756
GO_REF:0000107
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnks1bp1
tankyrase 1 binding protein 1
involved_in
ISO IEA IBA
(PMID:25749521) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:25749521
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:70,135,335...70,160,071
Ensembl chr 3:70,137,837...70,160,038
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:20160708) GO_REF:0000107 (PMID:16213212) MGI:1096393|MGI:2181667 (PMID:16286009)
RGD Ensembl
PMID:16213212 PMID:16286009 PMID:20160708
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
G
Crb1
crumbs cell polarity complex component 1
acts_upstream_of_or_within
ISO IEA
(PMID:17234588) GO_REF:0000107
RGD Ensembl
PMID:17234588
GO_REF:0000107
NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
G
Gpr52
G protein-coupled receptor 52
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:72,800,265...72,804,989
Ensembl chr13:72,800,127...72,806,180
G
Gpr88
G-protein coupled receptor 88
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:204,191,443...204,199,576
Ensembl chr 2:204,191,427...204,199,733
G
Hif1a
hypoxia inducible factor 1 subunit alpha
IEP
RGD
PMID:17475674
RGD:9068879
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Kcne1
potassium voltage-gated channel subfamily E regulatory subunit 1
IEP
RGD
PMID:24202060
RGD:12910722
NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
G
Opn1mw
opsin 1, medium wave sensitive
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:151,905,056...151,925,419
Ensembl chr X:151,905,096...151,925,388
G
Opn1sw
opsin 1, short wave sensitive
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457
G
Opn3
opsin 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:87,589,333...87,619,847
Ensembl chr13:87,589,333...87,619,847
G
Opn4
opsin 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
G
Opn5
opsin 5
involved_in
IBA ISO
GO_REF:0000033 (PMID:31607531)
GO_Central RGD
PMID:31607531
GO_REF:0000033
NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
G
Rgr
retinal G protein coupled receptor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:12,801,594...12,816,402
Ensembl chr16:12,801,594...12,816,223
G
Rho
rhodopsin
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:21052544)
GO_Central Ensembl RGD
PMID:21052544
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
G
Rp1
RP1, axonemal microtubule associated
acts_upstream_of_or_within
ISO IEA
(PMID:21052544) GO_REF:0000107
RGD Ensembl
PMID:21052544
GO_REF:0000107
NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363
G
Rpgr
retinitis pigmentosa GTPase regulator
acts_upstream_of_or_within
ISO IEA
MGI:2386674 (PMID:10725384) GO_REF:0000107
RGD Ensembl
PMID:10725384
GO_REF:0000107
NCBI chr X:12,566,447...12,628,171
Ensembl chr X:12,566,645...12,747,882
G
Rrh
retinal pigment epithelium derived rhodopsin homolog
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:218,362,195...218,374,387
Ensembl chr 2:218,362,200...218,374,599
G
Trpm1
transient receptor potential cation channel, subfamily M, member 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:19896109) GO_REF:0000107 (PMID:19861548) MGI:4421441 (PMID:19966281), (PMID:21052544)
RGD Ensembl
PMID:19861548 PMID:19896109 PMID:19966281 PMID:21052544
GO_REF:0000107
NCBI chr 1:117,718,896...117,835,434
Ensembl chr 1:117,718,896...117,834,605
G
Aqp1
aquaporin 1
involved_in
ISO ISS
(PMID:19424603) GO_REF:0000024
RGD UniProt
PMID:19424603
GO_REF:0000024
NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:84,482,512...84,494,690
G
Atf4
activating transcription factor 4
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
G
Atr
ATR serine/threonine kinase
involved_in
ISO IEA
(PMID:9925639) GO_REF:0000107
RGD Ensembl
PMID:9925639
GO_REF:0000107
NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
G
Aurkb
aurora kinase B
involved_in
ISO IEA ISS
(PMID:20959462) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20959462
GO_REF:0000024 GO_REF:0000107
NCBI chr10:53,744,290...53,750,831
Ensembl chr10:53,745,142...53,750,837
G
Bak1
BCL2-antagonist/killer 1
involved_in
ISO IEA
(PMID:15901672) GO_REF:0000107
RGD Ensembl
PMID:15901672
GO_REF:0000107
NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
G
Bax
BCL2 associated X, apoptosis regulator
acts_upstream_of_or_within
ISO IEA
MGI:98834 (PMID:14963330) GO_REF:0000107
RGD Ensembl
PMID:14963330
GO_REF:0000107
NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368
G
Bmf
Bcl2 modifying factor
involved_in
ISO
(PMID:23629966)
RGD
PMID:23629966
NCBI chr 3:105,499,534...105,520,159
Ensembl chr 3:105,499,538...105,520,145
G
Casp9
caspase 9
involved_in
ISO IEA
(PMID:15657060) GO_REF:0000107
RGD Ensembl
PMID:15657060
GO_REF:0000107
Ensembl chr 5:154,109,046...154,126,626
G
Casp9_v1
caspase-9-carboxyl-terminal divergent
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
G
Cops9
COP9 signalosome subunit 9
involved_in
ISO
(PMID:26456823)
RGD
PMID:26456823
NCBI chr 9:93,209,843...93,214,774
Ensembl chr 9:93,209,843...93,213,317
G
Crebbp
CREB binding protein
involved_in
ISO ISS
(PMID:24939902) GO_REF:0000024
RGD UniProt
PMID:24939902
GO_REF:0000024
NCBI chr10:11,842,307...11,968,266
Ensembl chr10:11,335,953...11,461,888
G
Cul4a
cullin 4A
involved_in
ISO
(PMID:22118460)
RGD
PMID:22118460
NCBI chr16:83,086,688...83,124,503
Ensembl chr16:76,384,546...76,422,330
G
Ddb1
damage-specific DNA binding protein 1
involved_in
ISO
(PMID:22118460)
RGD
PMID:22118460
NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
G
Ddb2
damage specific DNA binding protein 2
involved_in
ISO
(PMID:22118460)
RGD
PMID:22118460
NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631
G
Ddias
DNA damage-induced apoptosis suppressor
acts_upstream_of_or_within
ISO
(PMID:17515607)
RGD
PMID:17515607
NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462
G
Dhx36
DEAH-box helicase 36
involved_in
ISO IEA ISS
(PMID:27940037) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27940037
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
G
Eif2ak4
eukaryotic translation initiation factor 2 alpha kinase 4
involved_in
ISO
(PMID:12176355)
RGD
PMID:12176355
NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
G
Eif2s1
eukaryotic translation initiation factor 2 subunit alpha
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:12176355)
UniProt Ensembl RGD
PMID:12176355
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:97,672,829...97,697,499
Ensembl chr 6:97,672,766...97,706,225
G
Ep300
E1A binding protein p300
involved_in
ISO
(PMID:24939902)
RGD
PMID:24939902
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Ercc4
ERCC excision repair 4, endonuclease catalytic subunit
involved_in
ISO
UniProtKB:Q15554 (PMID:17055345), (PMID:32034146)
RGD
PMID:17055345 PMID:32034146
NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 Ensembl chr10:2,419,038...2,448,369
G
Fbxw7
F-box and WD repeat domain containing 7
involved_in
ISO
(PMID:17873522)
RGD
PMID:17873522
NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
G
Ino80
INO80 complex ATPase subunit
involved_in
ISO IEA
(PMID:18026119) GO_REF:0000107
RGD Ensembl
PMID:18026119
GO_REF:0000107
NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
G
Kdm1a
lysine demethylase 1A
acts_upstream_of_or_within
ISO IEA
(PMID:24217620) GO_REF:0000107
RGD Ensembl
PMID:24217620
GO_REF:0000107
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Mapk13
mitogen activated protein kinase 13
involved_in
ISO IEA
(PMID:9218798) GO_REF:0000107
RGD Ensembl
PMID:9218798
GO_REF:0000107
NCBI chr20:6,835,277...6,845,500
Ensembl chr20:6,835,320...6,844,222
G
Mapk9
mitogen-activated protein kinase 9
IMP
RGD
PMID:8875991
RGD:2304246
NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,169,675...34,210,178
G
Mettl3
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit
involved_in
ISO IEA
(PMID:28297716) GO_REF:0000107
RGD Ensembl
PMID:28297716
GO_REF:0000107
NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
G
Myc
MYC proto-oncogene, bHLH transcription factor
involved_in
ISO
(PMID:17873522)
RGD
PMID:17873522
NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630
G
N4bp1
Nedd4 binding protein 1
involved_in
ISO IEA
(PMID:17592138) GO_REF:0000107
RGD Ensembl
PMID:17592138
GO_REF:0000107
NCBI chr19:20,222,811...20,273,570
Ensembl chr19:20,222,776...20,273,570
G
Nedd4
NEDD4 E3 ubiquitin protein ligase
involved_in
ISO IEA
(PMID:17996703) GO_REF:0000107
RGD Ensembl
PMID:17996703
GO_REF:0000107
NCBI chr 8:82,264,751...82,349,642
Ensembl chr 8:73,383,695...73,468,951
G
Nfatc4
nuclear factor of activated T-cells 4
acts_upstream_of_or_within
ISO
MGI:97583 (PMID:17242187)
RGD
PMID:17242187
NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
G
Noc2l
NOC2-like nucleolar associated transcriptional repressor
involved_in
ISO IEA
(PMID:20959462) GO_REF:0000107
RGD Ensembl
PMID:20959462
GO_REF:0000107
NCBI chr 5:166,820,150...166,831,949
Ensembl chr 5:166,820,161...166,831,949
G
Npm1
nucleophosmin 1
involved_in
ISO
(PMID:19160485)
RGD
PMID:19160485
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 Ensembl chr X:17,739,941...17,751,645
G
Nsmce3
NSE3 homolog, SMC5-SMC6 complex component
involved_in
ISO
(PMID:27427983)
RGD
PMID:27427983
NCBI chr 1:118,401,302...118,402,629
G
Parp1
poly (ADP-ribose) polymerase 1
involved_in
ISO IEA
(PMID:24289924) GO_REF:0000107
RGD Ensembl
PMID:24289924
GO_REF:0000107
NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404
G
Pbk
PDZ binding kinase
acts_upstream_of_or_within
ISO
MGI:5293435 (PMID:21715333)
RGD
PMID:21715333
NCBI chr15:40,022,873...40,034,014
Ensembl chr15:40,023,002...40,034,014
G
Pcna
proliferating cell nuclear antigen
involved_in
IEP IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:24939902)
Ensembl UniProt RGD
PMID:24939902 PMID:8905661
GO_REF:0000024 GO_REF:0000107, RGD:10448977
NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995
G
Pik3r1
phosphoinositide-3-kinase regulatory subunit 1
acts_upstream_of_or_within
ISO
MGI:103296|MGI:2149414 (PMID:17242187)
RGD
PMID:17242187
NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631
G
Pold1
DNA polymerase delta 1, catalytic subunit
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:24939902)
UniProt Ensembl RGD
PMID:24939902
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465
G
Polk
DNA polymerase kappa
involved_in
ISO IEA
(PMID:28297716) GO_REF:0000107
RGD Ensembl
PMID:28297716
GO_REF:0000107
NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313
G
Ppp1r15a
protein phosphatase 1, regulatory subunit 15A
IEP
RGD
PMID:9811446
RGD:9999409
NCBI chr 1:105,136,521...105,139,596
Ensembl chr 1:96,000,058...96,003,171
G
Prkcd
protein kinase C, delta
involved_in
ISO IEA ISS
(PMID:17303575) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:17303575
GO_REF:0000024 GO_REF:0000107
NCBI chr16:5,769,217...5,799,380
Ensembl chr16:5,769,215...5,799,352
G
Ptn
pleiotrophin
IEP
RGD
PMID:17925408
RGD:10044023
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Ptprk
protein tyrosine phosphatase, receptor type, K
involved_in
ISO
(PMID:16849327)
RGD
PMID:16849327
NCBI chr 1:16,738,896...17,236,687
Ensembl chr 1:16,850,576...17,103,605
G
Rbx1
ring-box 1
involved_in
ISO
(PMID:22118460)
RGD
PMID:22118460
NCBI chr 7:114,870,893...114,881,194
Ensembl chr 7:112,990,835...113,001,051
G
Rhbdd1
rhomboid domain containing 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:19358743)
UniProt Ensembl RGD
PMID:19358743
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:83,630,063...83,748,689
G
Rhno1
RAD9-HUS1-RAD1 interacting nuclear orphan 1
involved_in
ISO
(PMID:21659603)
RGD
PMID:21659603
NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371
G
Rnf168
ring finger protein 168
acts_upstream_of_or_within
ISO
(PMID:24217620)
RGD
PMID:24217620
NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277
G
Rpl26
ribosomal protein L26
involved_in
ISO
(PMID:16213212)
RGD
PMID:16213212
NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
G
Ruvbl2
RuvB-like AAA ATPase 2
involved_in
ISO IEA
(PMID:18026119) GO_REF:0000107
RGD Ensembl
PMID:18026119
GO_REF:0000107
NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342
G
Sde2
SDE2 telomere maintenance homolog
involved_in
IEA ISO
GO_REF:0000107 (PMID:27906959)
Ensembl RGD
PMID:27906959
GO_REF:0000107
NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140
G
Smpd1
sphingomyelin phosphodiesterase 1
involved_in
ISO IEA
(PMID:17303575) GO_REF:0000107
RGD Ensembl
PMID:17303575
GO_REF:0000107
NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
G
Taf1
TATA-box binding protein associated factor 1
involved_in
ISO
(PMID:24289924)
RGD
PMID:24289924
NCBI chr X:70,680,901...70,756,535
Ensembl chr X:66,640,982...66,716,543
G
Tmem161a
transmembrane protein 161A
involved_in
ISO
(PMID:16551573)
RGD
PMID:16551573
NCBI chr16:19,237,638...19,248,151
Ensembl chr16:19,238,487...19,248,087
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:16213212), (PMID:23629966) GO_REF:0000107 (PMID:23629966) MGI:99702 (PMID:14963330)
RGD Ensembl
PMID:14963330 PMID:16213212 PMID:23629966
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
G
Tp53inp1
tumor protein p53 inducible nuclear protein 1
acts_upstream_of_or_within
ISO IEA
(PMID:11557757) GO_REF:0000107
RGD Ensembl
PMID:11557757
GO_REF:0000107
NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
G
Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO IEA
(PMID:20511593) GO_REF:0000107
RGD Ensembl
PMID:20511593
GO_REF:0000107
NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
G
Triap1
TP53 regulated inhibitor of apoptosis 1
involved_in
ISO IEA
(PMID:15735003) GO_REF:0000107
RGD Ensembl
PMID:15735003
GO_REF:0000107
NCBI chr12:41,267,534...41,270,053
Ensembl chr12:41,267,549...41,270,042
G
Usp28
ubiquitin specific peptidase 28
involved_in
ISO
(PMID:17873522)
RGD
PMID:17873522
NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229
G
Yy1
YY1 transcription factor
involved_in
ISO IEA
(PMID:18026119) GO_REF:0000107
RGD Ensembl
PMID:18026119
GO_REF:0000107
NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747
G
Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO IEA
(PMID:24657165) GO_REF:0000107
RGD Ensembl
PMID:24657165
GO_REF:0000107
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
G
Cers1
ceramide synthase 1
involved_in
ISO
(PMID:19800881)
RGD
PMID:19800881
NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,104,466...19,112,519
G
Gdf1
growth differentiation factor 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,097,314...19,112,519
G
Mme
membrane metallo-endopeptidase
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20876573)
UniProt Ensembl RGD
PMID:20876573
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
G
Mmp1
matrix metallopeptidase 1
involved_in
ISO
(PMID:31380578)
RGD
PMID:31380578
NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
G
Mmp2
matrix metallopeptidase 2
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:31380578)
Ensembl UniProt RGD
PMID:31380578
GO_REF:0000024 GO_REF:0000107
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
G
Mmp3
matrix metallopeptidase 3
involved_in
ISO IEA ISS
(PMID:31380578) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:31380578
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:4,640,397...4,653,963
Ensembl chr 8:4,640,416...4,653,961
G
Mmp9
matrix metallopeptidase 9
involved_in
ISO IEA
(PMID:31380578) GO_REF:0000107
RGD Ensembl
PMID:31380578
GO_REF:0000107
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
G
Opn1sw
opsin 1, short wave sensitive
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:31380578) GO_REF:0000024
Ensembl RGD UniProt
PMID:31380578
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457
G
Opn3
opsin 3
involved_in
ISO IEA
(PMID:31380578) GO_REF:0000107
RGD Ensembl
PMID:31380578
GO_REF:0000107
NCBI chr13:87,589,333...87,619,847
Ensembl chr13:87,589,333...87,619,847
G
Opn5
opsin 5
involved_in
ISO IEA
(PMID:31380578) GO_REF:0000107
RGD Ensembl
PMID:31380578
GO_REF:0000107
NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
G
Ppid
peptidylprolyl isomerase D
involved_in
ISS ISO
GO_REF:0000024 (PMID:23220213)
UniProt RGD
PMID:23220213
GO_REF:0000024
NCBI chr 2:164,727,803...164,740,168
Ensembl chr 2:164,727,779...164,740,221
G
Timp1
TIMP metallopeptidase inhibitor 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:31380578)
UniProt Ensembl RGD
PMID:31380578
GO_REF:0000024 GO_REF:0000107
NCBI chr X:1,212,969...1,217,714
Ensembl chr X:1,212,972...1,217,664
G
Cdkn1a
cyclin-dependent kinase inhibitor 1A
involved_in
ISO
(PMID:25329316)
RGD
PMID:25329316
NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585
G
Crip1
cysteine rich protein 1
involved_in
ISO ISS
(PMID:20415737)
RGD
PMID:20415737 PMID:20415737
RGD:8553326
NCBI chr 6:132,226,746...132,234,620
Ensembl chr 6:132,226,746...132,234,620
G
Hyal1
hyaluronidase 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:21699545)
UniProt Ensembl RGD
PMID:21699545
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:108,250,668...108,254,519
Ensembl chr 8:108,250,667...108,260,210
G
Hyal2
hyaluronidase 2
involved_in
ISO ISS IEA
(PMID:21699545) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:21699545
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850
G
Hyal3
hyaluronidase 3
involved_in
ISO
(PMID:21699545)
RGD
PMID:21699545
NCBI chr 8:108,254,385...108,260,020
Ensembl chr 8:108,250,667...108,260,647
G
Map3k20
mitogen-activated protein kinase kinase kinase 20
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:35857590) (PMID:32289254)
UniProt Ensembl RGD
PMID:32289254 PMID:35857590
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:57,130,539...57,289,943
Ensembl chr 3:57,130,551...57,289,626
G
Mapk11
mitogen-activated protein kinase 11
involved_in
ISO IEA
(PMID:35857590) GO_REF:0000107
RGD Ensembl
PMID:35857590
GO_REF:0000107
NCBI chr 7:120,218,471...120,225,488
Ensembl chr 7:120,218,478...120,225,395
G
Mapk14
mitogen activated protein kinase 14
involved_in
IEA ISO
GO_REF:0000107 (PMID:35857590)
Ensembl RGD
PMID:35857590
GO_REF:0000107
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
G
Mfap4
microfibril associated protein 4
involved_in
ISO IEA
(PMID:22355679) GO_REF:0000107
RGD Ensembl
PMID:22355679
GO_REF:0000107
NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155
G
Mme
membrane metallo-endopeptidase
involved_in
ISO ISS IEA
(PMID:20876573) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:20876573
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
G
Nlrp1a
NLR family, pyrin domain containing 1A
involved_in
ISO
(PMID:30096351)
RGD
PMID:30096351
NCBI chr10:55,778,560...55,833,639
Ensembl chr10:55,778,560...55,825,180
G
Rpl13a
ribosomal protein L13A
IEP
RGD
PMID:10483362
RGD:11036101
NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
G
Rpl35
ribosomal protein L35
IEP
RGD
PMID:10483362
RGD:11036101
NCBI chr 3:22,753,255...22,756,217
Ensembl chr 3:22,753,253...22,756,243
G
Stk11
serine/threonine kinase 11
involved_in
ISO
(PMID:25329316)
RGD
PMID:25329316
NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
G
Ei24
EI24, autophagy associated transmembrane protein
acts_upstream_of_or_within
ISO IEA
MGI:98834 (PMID:24014029) GO_REF:0000107
RGD Ensembl
PMID:24014029
GO_REF:0000107
NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
G
Mdm2
MDM2 proto-oncogene
IEP
RGD
PMID:14558917
RGD:2317408
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Pierce1
piercer of microtubule wall 1
acts_upstream_of_or_within
ISO
(PMID:21159655)
RGD
PMID:21159655
NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568
G
Polh
DNA polymerase eta
acts_upstream_of_or_within
ISO IEA
MGI:1347081|MGI:3614412 (PMID:17114294) GO_REF:0000107
RGD Ensembl
PMID:17114294
GO_REF:0000107
NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723
G
Poli
DNA polymerase iota
acts_upstream_of_or_within
ISO
MGI:1891457|MGI:3055735 (PMID:17114294)
RGD
PMID:17114294
NCBI chr18:64,116,774...64,134,373
Ensembl chr18:64,116,774...64,163,418
G
Tp53
tumor protein p53
acts_upstream_of_or_within
ISO IEA
MGI:108090 (PMID:24014029) GO_REF:0000107
RGD Ensembl
PMID:24014029
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
G
Atm
ATM serine/threonine kinase
involved_in
ISO
(PMID:26323318)
RGD
PMID:26323318
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
G
Ccnd2
cyclin D2
acts_upstream_of_or_within
ISO
MGI:2180642 (PMID:23714078)
RGD
PMID:23714078
NCBI chr 4:159,966,883...159,989,261
Ensembl chr 4:159,962,363...159,989,495
G
Dbn1
drebrin 1
IEP
RGD
PMID:23578130
RGD:10398817
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
G
Dnm2
dynamin 2
IEP
RGD
PMID:15994918
RGD:9685147
NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
G
Hamp
hepcidin antimicrobial peptide
IEP
RGD
PMID:17090718
RGD:11041722
NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
G
Kat5
lysine acetyltransferase 5
IEP
RGD
PMID:15985650
RGD:2316135
NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458
G
Lcn2
lipocalin 2
IEP
RGD
PMID:23331620
RGD:126790570
NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
G
Nipbl
NIPBL, cohesin loading factor
involved_in
ISO IEA
(PMID:17468178) GO_REF:0000107
RGD Ensembl
PMID:17468178
GO_REF:0000107
NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
G
Nucks1
nuclear casein kinase and cyclin-dependent kinase substrate 1
involved_in
ISO
(PMID:26323318)
RGD
PMID:26323318
NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229
G
Prap1
proline-rich acidic protein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:32629119)
UniProt Ensembl RGD
PMID:32629119
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:194,883,078...194,886,874
Ensembl chr 1:194,883,078...194,886,872
G
Sfrp1
secreted frizzled-related protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19778523)
Ensembl RGD
PMID:19778523
GO_REF:0000107
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO IEA
(PMID:19778523) GO_REF:0000107
RGD Ensembl
PMID:19778523
GO_REF:0000107
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Tp53bp1
tumor protein p53 binding protein 1
IEP
RGD
PMID:21915754
RGD:9586753
NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
G
Xrcc5
X-ray repair cross complementing 5
IDA
RGD
PMID:11966321
RGD:727219
NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
G
Xrcc6
X-ray repair cross complementing 6
IDA
RGD
PMID:11175667
RGD:2317102
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
G
Gnb5
G protein subunit beta 5
acts_upstream_of_or_within
ISO IEA
(PMID:23555598) GO_REF:0000107
RGD Ensembl
PMID:23555598
GO_REF:0000107
NCBI chr 8:76,076,120...76,105,069
Ensembl chr 8:76,073,306...76,105,069
G
Rgs9
regulator of G-protein signaling 9
acts_upstream_of_or_within
ISO IEA
(PMID:23555598) GO_REF:0000107
RGD Ensembl
PMID:23555598
GO_REF:0000107
NCBI chr10:94,195,265...94,270,892
Ensembl chr10:94,197,054...94,270,892
G
Tent2
terminal nucleotidyltransferase 2
IEP
RGD
PMID:23700402
RGD:11041783
NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
G
Pola1
DNA polymerase alpha 1, catalytic subunit
NOT|involved_in
ISO ISS
(PMID:1730053) GO_REF:0000024
RGD UniProt
PMID:1730053
GO_REF:0000024
NCBI chr X:62,028,475...62,342,455
Ensembl chr X:58,034,619...58,348,536
G
Pold3
DNA polymerase delta 3, accessory subunit
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665
G
Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO IEA
MGI:3052754 (PMID:23993650) GO_REF:0000107
RGD Ensembl
PMID:23993650
GO_REF:0000107
NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
G
Gnat1
G protein subunit alpha transducin 1
IMP
RGD
PMID:11931744
RGD:1599009
NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
G
Grk1
G protein-coupled receptor kinase 1
TAS
RGD
PMID:9147475
RGD:729748
NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
G
Pcp2
Purkinje cell protein 2
acts_upstream_of_or_within
ISO
MGI:3579782 (PMID:18768681)
RGD
PMID:18768681
NCBI chr12:1,681,659...1,683,899
Ensembl chr12:1,681,659...1,683,899
G
Rho
rhodopsin
IDA
RGD
PMID:8814134
RGD:6893595
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
G
Opn5
opsin 5
involved_in
ISO IEA
(PMID:22043319) GO_REF:0000107
RGD Ensembl
PMID:22043319
GO_REF:0000107
NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
G
Rho
rhodopsin
IDA
RGD
PMID:2525480
RGD:6893558
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
G
Gata3
GATA binding protein 3
involved_in
ISO IEA
(PMID:19735555) GO_REF:0000107
RGD Ensembl
PMID:19735555
GO_REF:0000107
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Npm1
nucleophosmin 1
involved_in
ISO
(PMID:12080348)
RGD
PMID:12080348
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 Ensembl chr X:17,739,941...17,751,645
G
Aipl1
aryl hydrocarbon receptor-interacting protein-like 1
acts_upstream_of_or_within
ISO IEA
MGI:3054784|MGI:3054793 (PMID:15365173), (PMID:15365178) GO_REF:0000107
RGD Ensembl
PMID:15365173 PMID:15365178
GO_REF:0000107
NCBI chr10:56,655,693...56,664,922
Ensembl chr10:56,655,693...56,664,922
G
Grk1
G protein-coupled receptor kinase 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000002 GO_REF:0000107 (PMID:15946941)
UniProt InterPro Ensembl RGD
PMID:15946941
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107
NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
G
Rpl26
ribosomal protein L26
involved_in
ISO
(PMID:16213212)
RGD
PMID:16213212
NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
G
Actr5
actin related protein 5
involved_in
ISO IEA
(PMID:20855601) GO_REF:0000107
RGD Ensembl
PMID:20855601
GO_REF:0000107
NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110
G
Cul4b
cullin 4B
involved_in
ISO
(PMID:22334663)
RGD
PMID:22334663
NCBI chr X:117,287,481...117,326,688
Ensembl chr X:117,287,484...117,326,688
G
Ddb1
damage-specific DNA binding protein 1
involved_in
ISO
(PMID:14751237), (PMID:22334663)
RGD
PMID:14751237 PMID:22334663
NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
G
Ddb2
damage specific DNA binding protein 2
involved_in
ISO IEA
(PMID:14751237), (PMID:22334663) GO_REF:0000107
RGD Ensembl
PMID:14751237 PMID:22334663
GO_REF:0000107
NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631
G
Ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963
G
H2ac25
H2A clustered histone 25
involved_in
ISO
(PMID:22334663)
RGD
PMID:22334663
NCBI chr10:43,733,702...43,735,254
Ensembl chr10:43,733,668...43,744,874
G
Ino80
INO80 complex ATPase subunit
involved_in
ISO IEA
(PMID:20855601) GO_REF:0000107
RGD Ensembl
PMID:20855601
GO_REF:0000107
NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
G
Mc1r
melanocortin 1 receptor
involved_in
ISO IEA
(PMID:18292087) GO_REF:0000107
RGD Ensembl
PMID:18292087
GO_REF:0000107
NCBI chr19:51,452,448...51,455,375
Ensembl chr19:51,453,239...51,454,192
G
Rad23a
RAD23 homolog A, nucleotide excision repair protein
acts_upstream_of_or_within
ISO
(PMID:22431748)
RGD
PMID:22431748
NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695
G
Rad23b
RAD23 homolog B, nucleotide excision repair protein
acts_upstream_of_or_within
ISO
(PMID:22431748)
RGD
PMID:22431748
NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319
G
Sirt1
sirtuin 1
involved_in
ISO IEA
(PMID:20670893) GO_REF:0000107
RGD Ensembl
PMID:20670893
GO_REF:0000107
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
G
Xpa
XPA, DNA damage recognition and repair factor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726
G
Xpc
XPC complex subunit, DNA damage recognition and repair factor
involved_in
ISO IEA
(PMID:8077226) GO_REF:0000107 (PMID:22431748)
RGD Ensembl
PMID:8077226 PMID:22431748
GO_REF:0000107
NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all