Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to pH
go back to main search page
Accession:GO:0071467 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.


show annotations for term's descendants           Sort by:
cellular response to pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic1 acid sensing ion channel subunit 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22760635)		 UniProt
Ensembl
RGD		 PMID:22760635 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:132,677,158...132,707,379
Ensembl chr 7:130,799,917...130,828,541 		JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO (PMID:14699011) RGD PMID:14699011 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gna11 G protein subunit alpha 11 acts_upstream_of_or_within ISO
IEA		 (PMID:22733973)
GO_REF:0000107		 RGD
Ensembl		 PMID:22733973 GO_REF:0000107 NCBI chr 7:8,814,285...8,828,628
Ensembl chr 7:8,162,750...8,179,812 		JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17761367)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17761367 GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,512,659...40,560,483
Ensembl chr17:40,084,617...40,126,939 		JBrowse link
G Gpr68 G protein-coupled receptor 68 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5445001 (PMID:22733973)		 GO_Central
RGD		 PMID:22733973 GO_REF:0000033 NCBI chr 6:125,865,205...125,895,674
Ensembl chr 6:120,135,436...120,166,089 		JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 involved_in ISO (PMID:22020278) RGD PMID:22020278 NCBI chr12:40,001,205...40,030,671
Ensembl chr12:34,335,190...34,370,141 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19478093)		 UniProt
Ensembl
RGD		 PMID:19478093 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,129,311...117,133,162
Ensembl chr 8:108,250,667...108,260,210 		JBrowse link
G Kcnk18 potassium two pore domain channel subfamily K member 18 involved_in ISO
IEA		 (PMID:12754259)
GO_REF:0000107		 RGD
Ensembl		 PMID:12754259 GO_REF:0000107 NCBI chr 1:268,360,738...268,375,012
Ensembl chr 1:258,374,671...258,388,945 		JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 involved_in ISO
IEA		 (PMID:29019981)
GO_REF:0000107		 RGD
Ensembl		 PMID:29019981 GO_REF:0000107 NCBI chr12:6,357,851...6,372,151
Ensembl chr12:1,560,359...1,574,252 		JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in ISO
IEA		 (PMID:28904867)
GO_REF:0000107		 RGD
Ensembl		 PMID:28904867 GO_REF:0000107 NCBI chr 1:252,982,096...253,019,235
Ensembl chr 1:243,032,913...243,070,031 		JBrowse link
cellular response to acidic pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 IDA RGD PMID:12736332 RGD:1298620 NCBI chr10:66,368,308...67,438,237
Ensembl chr10:65,870,594...66,940,424 		JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:126,989,800...127,025,071
Ensembl chr 3:106,536,004...106,571,251 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:26033523 RGD:13204712 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Gpr4 G protein-coupled receptor 4 involved_in ISO (PMID:39753132), (PMID:39799123) RGD PMID:39753132 PMID:39799123 NCBI chr 1:87,993,398...88,004,568
Ensembl chr 1:78,865,409...78,876,599 		JBrowse link
G Gpr65 G-protein coupled receptor 65 involved_in ISO (PMID:15326175), (PMID:20855608), (PMID:33478938), (PMID:39753132) RGD PMID:15326175 PMID:20855608 PMID:33478938 PMID:39753132 NCBI chr 6:117,515,786...117,536,514
Ensembl chr 6:117,515,648...117,536,512 		JBrowse link
G Gpr68 G protein-coupled receptor 68 involved_in ISO (PMID:33478938), (PMID:39753132) RGD PMID:33478938 PMID:39753132 NCBI chr 6:125,865,205...125,895,674
Ensembl chr 6:120,135,436...120,166,089 		JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 IDA RGD PMID:8458414 RGD:7243874 NCBI chr11:45,066,875...45,080,024
Ensembl chr11:31,580,742...31,593,901 		JBrowse link
G Kcnk1 potassium two pore domain channel subfamily K member 1 involved_in IDA PMID:22948150 UniProt PMID:22948150 RGD:408345197 NCBI chr19:70,856,985...70,895,053
Ensembl chr19:53,959,657...53,997,724 		JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 involved_in ISO
IEA		 (PMID:22948150)
GO_REF:0000107		 RGD
Ensembl		 PMID:22948150 GO_REF:0000107 NCBI chr 6:31,483,129...31,519,061
Ensembl chr 6:25,763,228...25,799,153 		JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26919430)		 UniProt
Ensembl
RGD		 PMID:26919430 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:213,547,577...213,558,706
Ensembl chr 1:204,114,572...204,125,925 		JBrowse link
G Kcnk9 potassium two pore domain channel subfamily K member 9 involved_in ISO
IEA		 (PMID:22948150), (PMID:38630723)
GO_REF:0000107		 RGD
Ensembl		 PMID:22948150 PMID:38630723 GO_REF:0000107 NCBI chr 7:106,316,783...106,362,452
Ensembl chr 7:104,437,934...104,473,175 		JBrowse link
G Pkd1l3 polycystin 1 like 3, transient receptor potential channel interacting NOT|involved_in ISO (PMID:20605874)
(PMID:16891422)		 RGD PMID:16891422 PMID:20605874 NCBI chr19:54,494,529...54,559,596
Ensembl chr19:37,585,725...37,650,155 		JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in ISO
IEA		 (PMID:16891422), (PMID:29567962)
GO_REF:0000107		 RGD
Ensembl		 PMID:16891422 PMID:29567962 GO_REF:0000107 NCBI chr 1:252,982,096...253,019,235
Ensembl chr 1:243,032,913...243,070,031 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISO
ISS		 (PMID:20717956)
GO_REF:0000024		 RGD
UniProt		 PMID:20717956 GO_REF:0000024 NCBI chr 7:15,223,613...15,236,754
Ensembl chr 7:14,521,368...14,534,593 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 involved_in ISO (PMID:20717956) RGD PMID:20717956 NCBI chr 4:117,871,301...117,908,819
Ensembl chr 4:117,871,308...117,908,741 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha involved_in ISO
IEA		 (PMID:16423824)
GO_REF:0000107		 RGD
Ensembl		 PMID:16423824 GO_REF:0000107 NCBI chr 4:159,809,187...159,832,409
Ensembl chr 4:158,122,962...158,146,181 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in ISO (PMID:16423824) RGD PMID:16423824 NCBI chr 1:185,861,326...185,915,717
Ensembl chr 1:176,430,103...176,484,451 		JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma involved_in ISO
IEA		 (PMID:16423824)
GO_REF:0000107		 RGD
Ensembl		 PMID:16423824 GO_REF:0000107 NCBI chr 1:185,736,225...185,770,099
Ensembl chr 1:176,304,942...176,338,816 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24840010)		 UniProt
Ensembl
RGD		 PMID:24840010 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:150,859,412...150,913,525
Ensembl chr 5:145,576,334...145,629,624 		JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 involved_in ISO
IDA		 (PMID:11226139) RGD PMID:11226139 PMID:11226139 RGD:11535102 NCBI chr10:58,349,936...58,375,021
Ensembl chr10:57,851,428...57,876,513 		JBrowse link
cellular response to alkaline pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gh1 growth hormone 1 IEP RGD PMID:23639351 RGD:10003149 NCBI chr10:91,727,883...91,729,860
Ensembl chr10:91,228,103...91,230,078 		JBrowse link
G Insrr insulin receptor-related receptor involved_in ISO
IEA		 (PMID:21641549)
GO_REF:0000107		 RGD
Ensembl		 PMID:21641549 GO_REF:0000107 NCBI chr 2:175,553,244...175,572,676
Ensembl chr 2:173,255,414...173,274,800 		JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 involved_in IDA PMID:15677687 UniProt PMID:15677687 RGD:10047327 NCBI chr 1:213,547,577...213,558,706
Ensembl chr 1:204,114,572...204,125,925 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    response to stimulus 11067
      response to abiotic stimulus 1611
        response to pH 58
          cellular response to pH 30
            cellular response to acidic pH + 20
            cellular response to alkaline pH + 3
            cellular response to neutral pH 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      cellular response to stimulus 8963
        cellular response to environmental stimulus 456
          cellular response to abiotic stimulus 456
            cellular response to pH 30
              cellular response to acidic pH + 20
              cellular response to alkaline pH + 3
              cellular response to neutral pH 0
paths to the root