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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to metal ion
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Accession:GO:0071248 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
Synonyms:exact_synonym: cellular response to metal
 narrow_synonym: cellular response to heavy metal

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cellular response to metal ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule ISO titanium oxide particles RGD PMID:19653805 RGD:4892213 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Fstl3 follistatin like 3 ISO potassium RGD PMID:14692692 RGD:1302294 NCBI chrNW_004936588:250,359...255,922
Ensembl chrNW_004936588:250,249...256,902 		JBrowse link
G Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936490:17,312,390...17,314,423
Ensembl chrNW_004936490:17,312,390...17,314,409 		JBrowse link
G Hsd17b2 hydroxysteroid 17-beta dehydrogenase 2 ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936475:29,426,922...29,494,215
Ensembl chrNW_004936475:29,426,883...29,494,225 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 ISO lanthanum RGD PMID:28722058 RGD:13439714 NCBI chrNW_004936475:19,771,384...19,785,034
Ensembl chrNW_004936475:19,769,488...19,785,311 		JBrowse link
G Serpine1 serpin family E member 1 ISO barium RGD PMID:21596853 RGD:8547918 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO uranium RGD PMID:16476458 RGD:7243141 NCBI chrNW_004936597:1,667,700...1,684,533
Ensembl chrNW_004936597:1,667,569...1,684,539 		JBrowse link
G Star steroidogenic acute regulatory protein ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936710:1,523,289...1,530,181
Ensembl chrNW_004936710:1,523,355...1,529,672 		JBrowse link
cellular detoxification of cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,628,649...1,635,599
Ensembl chrNW_004936569:1,625,374...1,635,694 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Slc39a8 solute carrier family 39 member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:961,376...1,036,801
Ensembl chrNW_004936520:962,756...1,037,274 		JBrowse link
cellular response to aluminum ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 ISO RGD PMID:22138567 RGD:6483058 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151 		JBrowse link
cellular response to cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:17584760 RGD:8655656 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (PMID:15219627) MGI PMID:15219627 NCBI chrNW_004936539:8,321,432...8,323,909 JBrowse link
G Daxx death domain associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,546,091...25,550,390
Ensembl chrNW_004936476:25,546,036...25,550,392 		JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ISO RGD PMID:24361405 RGD:9685430 NCBI chrNW_004936470:26,994,549...27,099,758
Ensembl chrNW_004936470:26,994,215...27,100,999 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:15219627) MGI PMID:15219627 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349 		JBrowse link
G Gsn gelsolin ISO RGD PMID:16280379 RGD:1599859 NCBI chrNW_004936487:9,749,755...9,802,787
Ensembl chrNW_004936487:9,764,944...9,802,841 		JBrowse link
G Hesx1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15219627) Ensembl
MGI		 PMID:15219627 GO_REF:0000107 NCBI chrNW_004936473:7,545,982...7,572,222
Ensembl chrNW_004936473:7,545,839...7,548,013 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16183037) Ensembl
MGI		 PMID:16183037 GO_REF:0000107 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311 		JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9736451 RGD:10059378 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:21195169 RGD:11040689 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904 		JBrowse link
G LOC101969421 cytochrome P450 1A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16183037) Ensembl
MGI		 PMID:16183037 GO_REF:0000107 NCBI chrNW_004936471:33,704,616...33,709,455
Ensembl chrNW_004936471:33,703,792...33,709,484 		JBrowse link
G LOC101974890 metallothionein-1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,878,179...8,879,082
Ensembl chrNW_004936475:8,877,691...8,879,155 		JBrowse link
G LOC101975171 metallothionein-2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,897,736...8,899,499
Ensembl chrNW_004936475:8,897,578...8,899,690 		JBrowse link
G LOC101975452 metallothionein-2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:8,893,781...8,894,960
Ensembl chrNW_004936475:8,893,805...8,894,960 		JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:17719163 RGD:4835171 NCBI chrNW_004936471:33,367,810...33,380,764
Ensembl chrNW_004936471:33,367,810...33,380,764 		JBrowse link
G Mt3 metallothionein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,864,512...8,866,516
Ensembl chrNW_004936475:8,864,675...8,866,506 		JBrowse link
G Mt4 metallothionein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,842,863...8,845,105
Ensembl chrNW_004936475:8,809,813...8,845,137 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO RGD PMID:12499121 RGD:2317151 NCBI chrNW_004936602:3,411,106...3,418,826
Ensembl chrNW_004936602:3,413,282...3,418,831 		JBrowse link
G Sod1 superoxide dismutase 1 ISO RGD PMID:17584760 RGD:8655656 NCBI chrNW_004936500:10,345,154...10,352,873
Ensembl chrNW_004936500:10,345,154...10,352,867 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15219627) MGI PMID:15219627 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:17719163 RGD:4835171 NCBI chrNW_004936710:1,523,289...1,530,181
Ensembl chrNW_004936710:1,523,355...1,529,672 		JBrowse link
G Sumo1 small ubiquitin like modifier 1 involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004936726:1,402,977...1,413,974
Ensembl chrNW_004936726:1,399,050...1,429,205 		JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO RGD PMID:21467746 RGD:13830870 NCBI chrNW_004936520:555,878...588,052
Ensembl chrNW_004936520:556,231...588,752 		JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO RGD PMID:21467746 RGD:13830870 NCBI chrNW_004936478:18,981,457...19,003,924
Ensembl chrNW_004936478:18,985,711...19,002,056 		JBrowse link
cellular response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24037327)
(PMID:20935152)		 MGI
Ensembl		 PMID:20935152 PMID:24037327 GO_REF:0000107 NCBI chrNW_004936548:4,983,461...5,110,693
Ensembl chrNW_004936548:4,987,847...5,108,104 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G Adcy8 adenylate cyclase 8 involved_in ISO PMID:19158400
PMID:20410303		 RGD
UniProt		 PMID:19158400 PMID:19305019 PMID:20410303 RGD:13800545 RGD:7241269 RGD:7242424 NCBI chrNW_004936470:17,831,644...18,047,868
Ensembl chrNW_004936470:17,831,639...18,047,868 		JBrowse link
G Add1 adducin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:20,695,109...20,766,053
Ensembl chrNW_004936477:20,691,951...20,766,152 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within ISO (PMID:24191038) MGI PMID:24191038 NCBI chrNW_004936469:8,653,031...9,209,840 JBrowse link
G Ago2 argonaute RISC catalytic component 2 ISO RGD PMID:28404816 RGD:401900713 NCBI chrNW_004936470:10,641,109...10,690,587
Ensembl chrNW_004936470:10,628,128...10,680,106 		JBrowse link
G Akap5 A-kinase anchoring protein 5 acts_upstream_of_or_within ISO (PMID:23259949) MGI PMID:23259949 NCBI chrNW_004936495:8,173,521...8,179,249
Ensembl chrNW_004936495:8,176,249...8,177,556 		JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,232,183...3,241,307
Ensembl chrNW_004936677:3,232,183...3,241,253 		JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:25,477,094...25,502,823
Ensembl chrNW_004936472:25,477,010...25,502,840 		JBrowse link
G Asph aspartate beta-hydroxylase involved_in ISO (PMID:21062895) UniProt PMID:21062895 NCBI chrNW_004936496:11,604,992...11,815,680
Ensembl chrNW_004936496:11,604,680...11,816,852 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664 		JBrowse link
G Cacybp calcyclin binding protein ISO RGD PMID:11927578 RGD:625428 NCBI chrNW_004936481:13,198,744...13,203,518 JBrowse link
G Capn3 calpain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:5,667,839...5,711,822
Ensembl chrNW_004936471:5,668,169...5,711,075 		JBrowse link
G Carf calcium responsive transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,958,561...2,010,972
Ensembl chrNW_004936726:1,922,060...2,010,981 		JBrowse link
G Chp2 calcineurin like EF-hand protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,374,323...8,377,195
Ensembl chrNW_004936501:8,374,323...8,377,155 		JBrowse link
G Clic4 chloride intracellular channel 4 involved_in ISO (PMID:17636002) UniProt PMID:17636002 NCBI chrNW_004936474:9,664,872...9,711,036 JBrowse link
G Cpne2 copine 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:9,237,845...9,262,588
Ensembl chrNW_004936475:9,226,572...9,262,856 		JBrowse link
G Cpne3 copine 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936544:1,094,257...1,147,964
Ensembl chrNW_004936544:1,104,791...1,147,320 		JBrowse link
G Cpne5 copine 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:22,584,837...22,673,143
Ensembl chrNW_004936476:22,584,131...22,673,264 		JBrowse link
G Cpne6 copine 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936722:454,818...462,324
Ensembl chrNW_004936722:454,775...462,990 		JBrowse link
G Cpne7 copine 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936641:413,331...426,514
Ensembl chrNW_004936641:413,759...426,507 		JBrowse link
G Cpne8 copine 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936607:1,912,138...2,107,040
Ensembl chrNW_004936607:1,912,205...2,105,532 		JBrowse link
G Cpne9 copine family member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936602:3,439,172...3,462,951
Ensembl chrNW_004936602:3,438,888...3,463,510 		JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in ISO (PMID:15976007) UniProt PMID:15976007 NCBI chrNW_004936549:64,866...78,272
Ensembl chrNW_004936549:64,866...78,272 		JBrowse link
G Crp C-reactive protein ISO RGD PMID:22090504 RGD:6904210 NCBI chrNW_004936740:885,855...888,854
Ensembl chrNW_004936740:883,272...890,606 		JBrowse link
G Dpep1 dipeptidase 1 involved_in ISO (PMID:11139399), (PMID:17615681) UniProt PMID:11139399 PMID:17615681 NCBI chrNW_004936641:379,112...384,711
Ensembl chrNW_004936641:379,083...391,918 		JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) UniProt PMID:15254234 NCBI chrNW_004936703:5,744...45,636 JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:1852000 RGD:8662267 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772 		JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:19188248 RGD:10401231 NCBI chrNW_004936501:7,160,134...7,205,231
Ensembl chrNW_004936501:7,160,134...7,207,377 		JBrowse link
G Endog endonuclease G ISO RGD PMID:12582256 RGD:9685368 NCBI chrNW_004936487:16,282,115...16,285,486
Ensembl chrNW_004936487:16,282,398...16,285,418 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19365557) Ensembl
MGI		 PMID:19365557 GO_REF:0000107 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122 		JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19303854) Ensembl
MGI		 PMID:19303854 GO_REF:0000107 NCBI chrNW_004936706:1,900,954...1,907,567
Ensembl chrNW_004936706:1,900,931...1,906,772 		JBrowse link
G Fus FUS RNA binding protein ISO RGD PMID:19103256 RGD:9685716 NCBI chrNW_004936501:13,529,732...13,541,102
Ensembl chrNW_004936501:13,529,803...13,540,764 		JBrowse link
G Hpca hippocalcin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,786,171...15,794,830
Ensembl chrNW_004936474:15,785,879...15,798,740 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:9058202 RGD:11354978 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717 		JBrowse link
G Inhbb inhibin subunit beta B ISO RGD PMID:1634019 RGD:9743923 NCBI chrNW_004936469:50,186,036...50,191,455
Ensembl chrNW_004936469:50,186,036...50,191,461 		JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,489,127...16,594,712
Ensembl chrNW_004936483:16,489,133...16,594,783 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,840,113...4,848,881
Ensembl chrNW_004936471:4,840,152...4,848,881 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,378,046...3,477,177
Ensembl chrNW_004936526:3,376,786...3,477,554 		JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,006,506...3,023,355
Ensembl chrNW_004936661:3,006,505...3,022,823 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:19303854) MGI PMID:19303854 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19303854) Ensembl
MGI		 PMID:19303854 GO_REF:0000107 NCBI chrNW_004936659:1,890,786...1,892,619
Ensembl chrNW_004936659:1,891,080...1,892,123 		JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 ISO RGD PMID:8978827 RGD:150527856 NCBI chrNW_004936514:4,827,156...4,902,271
Ensembl chrNW_004936514:4,827,127...4,900,707 		JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:8790430 GO_REF:0000107 RGD:9693720 NCBI chrNW_004936557:2,133,596...2,493,170
Ensembl chrNW_004936557:2,133,564...2,493,155 		JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:23259949) MGI PMID:23259949 NCBI chrNW_004936514:10,735,247...10,787,682
Ensembl chrNW_004936514:10,735,809...10,787,678 		JBrowse link
G Kcnq3 potassium voltage-gated channel subfamily Q member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23259949) Ensembl
MGI		 PMID:23259949 GO_REF:0000107 NCBI chrNW_004936470:16,712,508...17,009,648
Ensembl chrNW_004936470:16,712,703...17,009,397 		JBrowse link
G Krt10 keratin 10 acts_upstream_of_or_within ISO (PMID:19303854) MGI PMID:19303854 NCBI chrNW_004936490:15,783,636...15,788,605
Ensembl chrNW_004936490:15,783,618...15,788,634 		JBrowse link
G Lgmn legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:772,764...792,792
Ensembl chrNW_004936733:772,708...792,995 		JBrowse link
G LOC101972766 tubulin alpha-1A chain involved_in ISO (PMID:27793670) MGI PMID:27793670 NCBI chrNW_004936512:6,959,656...6,964,299
Ensembl chrNW_004936512:6,958,985...6,964,299 		JBrowse link
G LOC101976824 nuclear factor of activated T cells 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23259949) Ensembl
MGI		 PMID:23259949 GO_REF:0000107 NCBI chrNW_004936514:3,453,475...3,579,292
Ensembl chrNW_004936514:3,467,178...3,578,882 		JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,600,344...4,608,793
Ensembl chrNW_004936588:4,600,344...4,608,787 		JBrowse link
G Mef2a myocyte enhancer factor 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:3,837,891...3,982,334
Ensembl chrNW_004936483:3,834,700...3,919,766 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:15998798) UniProt PMID:15998798 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661 		JBrowse link
G Micu1 mitochondrial calcium uptake 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:6,400,849...6,576,304
Ensembl chrNW_004936521:6,400,804...6,577,134 		JBrowse link
G Micu2 mitochondrial calcium uptake 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936720:372,497...480,234
Ensembl chrNW_004936720:372,458...480,597 		JBrowse link
G Micu3 mitochondrial calcium uptake family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936573:6,081,811...6,178,812
Ensembl chrNW_004936573:6,081,808...6,174,523 		JBrowse link
G Mylk myosin light chain kinase acts_upstream_of_or_within ISO (PMID:18524939) MGI PMID:18524939 NCBI chrNW_004936725:1,418,930...1,594,697
Ensembl chrNW_004936725:1,424,130...1,592,840 		JBrowse link
G Ncstn nicastrin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24889619) Ensembl
MGI		 PMID:24889619 GO_REF:0000107 NCBI chrNW_004936740:285,789...301,918
Ensembl chrNW_004936740:285,657...302,111 		JBrowse link
G Neurod2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,801,636...14,803,437
Ensembl chrNW_004936490:14,802,275...14,803,423 		JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (PMID:23259949) MGI PMID:23259949 NCBI chrNW_004936616:484,062...584,950
Ensembl chrNW_004936616:484,045...587,891 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:23219532) MGI PMID:23219532 NCBI chrNW_004936475:18,462,424...18,557,832
Ensembl chrNW_004936475:18,462,298...18,555,220 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:21767260 RGD:7349319 NCBI chrNW_004936473:27,364,404...27,387,337
Ensembl chrNW_004936473:27,364,389...27,387,412 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Ppif peptidylprolyl isomerase F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:404,574...411,381
Ensembl chrNW_004936521:404,544...411,539 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:18322138 RGD:8693423 NCBI chrNW_004936647:1,031,118...1,055,961
Ensembl chrNW_004936647:1,031,119...1,055,149 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879 		JBrowse link
G Rasgrp2 RAS guanyl releasing protein 2 involved_in ISO (PMID:24958846) UniProt PMID:24958846 NCBI chrNW_004936599:4,567,385...4,579,607 JBrowse link
G Rbm12 RNA binding motif protein 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:5,165,772...5,200,638
Ensembl chrNW_004936561:5,195,727...5,200,446
Ensembl chrNW_004936561:5,195,727...5,200,446 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,883,526...27,963,994
Ensembl chrNW_004936473:27,883,526...27,963,994 		JBrowse link
G Slc25a23 solute carrier family 25 member 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23344948) Ensembl
MGI		 PMID:23344948 GO_REF:0000107 NCBI chrNW_004936588:3,792,760...3,804,788
Ensembl chrNW_004936588:3,792,778...3,808,593 		JBrowse link
G Slc25a24 solute carrier family 25 member 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936731:173,366...224,156
Ensembl chrNW_004936731:173,337...224,239 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630 		JBrowse link
G Syt1 synaptotagmin 1 involved_in ISO PMID:12526776 ParkinsonsUK-UCL PMID:12526776 RGD:10047386 NCBI chrNW_004936698:65,210...575,538
Ensembl chrNW_004936698:377,179...575,802 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) UniProt PMID:8636221 NCBI chrNW_004936483:1,814,870...2,045,802
Ensembl chrNW_004936483:1,814,894...2,030,946 		JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:21,960...76,895
Ensembl chrNW_004936500:21,942...77,260 		JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in ISO PMID:24803536 UniProt PMID:24803536 RGD:12910999 NCBI chrNW_004936606:933,637...1,069,885
Ensembl chrNW_004936606:934,337...1,067,275 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
cellular response to cobalt ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:23814049 RGD:11341692 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:15519734 RGD:8662904 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:10559391 RGD:2313660 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Serpinf1 serpin family F member 1 ISO RGD PMID:21922517 RGD:8554899 NCBI chrNW_004936538:7,885,816...7,898,308
Ensembl chrNW_004936538:7,885,475...7,899,113 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:4,518,525...4,540,109
Ensembl chrNW_004936606:4,518,584...4,540,114 		JBrowse link
cellular response to copper ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401 		JBrowse link
G Aqp2 aquaporin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,628,677...7,633,344
Ensembl chrNW_004936512:7,628,495...7,634,107 		JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:20671235 PMID:23174565 RGD:11341702 RGD:11341707 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:24614235 RGD:11341682 NCBI chrNW_004936565:4,694,294...4,763,661
Ensembl chrNW_004936565:4,694,281...4,763,773 		JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936542:2,514,297...2,539,088
Ensembl chrNW_004936542:2,514,300...2,539,135 		JBrowse link
G Becn1 beclin 1 ISO RGD PMID:22540380 RGD:11561917 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151 		JBrowse link
G Daxx death domain associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,546,091...25,550,390
Ensembl chrNW_004936476:25,546,036...25,550,392 		JBrowse link
G Eln elastin ISO RGD PMID:18847363 RGD:9585685 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:24599699 RGD:11352816 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332 		JBrowse link
G LOC101969421 cytochrome P450 1A2 ISO RGD PMID:24599699 RGD:11352816 NCBI chrNW_004936471:33,704,616...33,709,455
Ensembl chrNW_004936471:33,703,792...33,709,484 		JBrowse link
G LOC101974890 metallothionein-1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,878,179...8,879,082
Ensembl chrNW_004936475:8,877,691...8,879,155 		JBrowse link
G LOC101975171 metallothionein-2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,897,736...8,899,499
Ensembl chrNW_004936475:8,897,578...8,899,690 		JBrowse link
G LOC101975452 metallothionein-2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,893,781...8,894,960
Ensembl chrNW_004936475:8,893,805...8,894,960 		JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:22540380 RGD:11561917 NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699 		JBrowse link
G Mt3 metallothionein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,864,512...8,866,516
Ensembl chrNW_004936475:8,864,675...8,866,506 		JBrowse link
G Mt4 metallothionein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,842,863...8,845,105
Ensembl chrNW_004936475:8,809,813...8,845,137 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO (PMID:24462598) MGI PMID:24462598 NCBI chrNW_004936490:13,265,269...13,279,164
Ensembl chrNW_004936490:13,266,347...13,279,206 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24462598) Ensembl
MGI		 PMID:24462598 GO_REF:0000107 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G Prnp prion protein (Kanno blood group) acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16254249) MGI
Ensembl		 PMID:16254249 GO_REF:0000107 NCBI chrNW_004936485:14,104,829...14,118,614
Ensembl chrNW_004936485:14,104,831...14,118,629 		JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
G Txnrd1 thioredoxin reductase 1 ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936492:10,185,096...10,244,466
Ensembl chrNW_004936492:10,187,206...10,225,989 		JBrowse link
cellular response to iron ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:19679821 PMID:23174565 RGD:11341702 RGD:11341808 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G B2m beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778 		JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023 		JBrowse link
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580 		JBrowse link
G LOC101970831 serotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394 		JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:17663481 RGD:5688717 NCBI chrNW_004936512:8,590,302...8,622,121
Ensembl chrNW_004936512:8,586,262...8,623,597 		JBrowse link
G Slc25a39 solute carrier family 25 member 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:769,056...770,682
Ensembl chrNW_004936541:769,064...770,686 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (PMID:20808827) UniProt PMID:20808827 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317 		JBrowse link
G Tfr2 transferrin receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:667,570...681,872
Ensembl chrNW_004936543:668,157...682,174 		JBrowse link
cellular response to iron(II) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:19608791 RGD:10045561 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
cellular response to iron(III) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9531620) Ensembl
MGI		 PMID:9531620 GO_REF:0000107 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778 		JBrowse link
G Ccnb1 cyclin B1 ISO ferric ammonium citrate RGD PMID:18254965 RGD:2316320 NCBI chrNW_004936480:400,287...407,677
Ensembl chrNW_004936480:399,224...407,704 		JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:16135072 PMID:17469137 RGD:12904039 RGD:12904046 NCBI chrNW_004936471:36,547,552...36,601,327
Ensembl chrNW_004936471:36,547,500...36,600,636 		JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793 		JBrowse link
cellular response to lead ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO lead, gallium RGD PMID:16566714 RGD:4144781 NCBI chrNW_004936559:226,481...237,258
Ensembl chrNW_004936559:226,424...241,684 		JBrowse link
G Anxa5 annexin A5 ISO RGD PMID:11578147 RGD:10053705 NCBI chrNW_004936662:926,302...959,964
Ensembl chrNW_004936662:925,940...939,451 		JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:24316150 RGD:11341684 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:17439918 RGD:11344879 NCBI chrNW_004936578:98,489...113,125
Ensembl chrNW_004936578:98,273...113,153 		JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:22764079 RGD:9588241 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:16566714 RGD:4144781 NCBI chrNW_004936542:4,037,888...4,046,089
Ensembl chrNW_004936542:4,037,201...4,050,810 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:33576715 RGD:155582212 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:25193092 RGD:13207490 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ucp2 uncoupling protein 2 ISO RGD PMID:33576715 RGD:155582212 NCBI chrNW_004936498:3,059,700...3,066,112
Ensembl chrNW_004936498:3,059,297...3,066,197 		JBrowse link
cellular response to lithium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy7 adenylate cyclase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,368,069...3,393,306
Ensembl chrNW_004936475:3,340,800...3,394,698 		JBrowse link
G Calr calreticulin ISO RGD PMID:16236328 RGD:2326183 NCBI chrNW_004936659:1,994,695...1,999,070
Ensembl chrNW_004936659:1,994,648...1,999,430 		JBrowse link
G Cdh1 cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203 		JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19056892) MGI
Ensembl		 PMID:19056892 GO_REF:0000107 NCBI chrNW_004936587:4,573,166...4,578,480
Ensembl chrNW_004936587:4,572,728...4,578,461 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha acts_upstream_of_or_within ISO (PMID:15673614) MGI PMID:15673614 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:12610652 RGD:10395276 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Fabp4 fatty acid binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15673614) Ensembl
MGI		 PMID:15673614 GO_REF:0000107 NCBI chrNW_004936656:2,722,970...2,727,383
Ensembl chrNW_004936656:2,722,713...2,729,046 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:20530871) MGI PMID:20530871 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15673614) Ensembl
MGI		 PMID:15673614 GO_REF:0000107 NCBI chrNW_004936706:266,462...277,256
Ensembl chrNW_004936706:269,126...277,256 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:18932008 RGD:10045540 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881 		JBrowse link
G Lig4 DNA ligase 4 ISO RGD PMID:19285016 RGD:2317095 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933 		JBrowse link
G LOC101958062 glutathione S-transferase A4 ISO RGD PMID:18082333 RGD:2293846 NCBI chrNW_004936476:7,873,218...7,888,301
Ensembl chrNW_004936476:7,873,194...7,889,048 		JBrowse link
G Myog myogenin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15673614) Ensembl
MGI		 PMID:15673614 GO_REF:0000107 NCBI chrNW_004936567:1,507,042...1,509,814
Ensembl chrNW_004936567:1,507,042...1,509,815 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:20530871) MGI PMID:20530871 NCBI chrNW_004936475:18,462,424...18,557,832
Ensembl chrNW_004936475:18,462,298...18,555,220 		JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20530871) Ensembl
MGI		 PMID:20530871 GO_REF:0000107 NCBI chrNW_004936722:178,866...187,847
Ensembl chrNW_004936722:179,200...187,800 		JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:21994254 RGD:5508722 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Nts neurotensin ISO RGD PMID:7898306 RGD:9743905 NCBI chrNW_004936507:3,318,982...3,329,248
Ensembl chrNW_004936507:3,318,915...3,329,342 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma acts_upstream_of_or_within ISO (PMID:15673614) MGI PMID:15673614 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17284610) Ensembl
MGI		 PMID:17284610 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Slc13a2 solute carrier family 13 member 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:4,685,538...4,708,049
Ensembl chrNW_004936538:4,685,538...4,708,251 		JBrowse link
G Slc13a5 solute carrier family 13 member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:1,288,637...1,316,884
Ensembl chrNW_004936677:1,288,456...1,318,221 		JBrowse link
G Slc18a1 solute carrier family 18 member A1 ISO RGD PMID:11080216 RGD:5131196 NCBI chrNW_004936555:4,249,821...4,271,379
Ensembl chrNW_004936555:4,249,821...4,271,379 		JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:19840776 RGD:2317083 NCBI chrNW_004936568:974,575...1,065,800
Ensembl chrNW_004936568:974,767...1,065,804 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO RGD PMID:19285016 RGD:2317095 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226 		JBrowse link
cellular response to magnesium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 involved_in ISO (PMID:23903368) UniProt PMID:23903368 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding ISO RGD PMID:30950934 RGD:153350153 NCBI chrNW_004936543:105,983...113,475
Ensembl chrNW_004936543:105,956...114,190 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:3,555,835...3,581,651
Ensembl chrNW_004936626:3,555,762...3,581,659 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19154422 RGD:2326036 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ISO RGD PMID:21030597 RGD:7244391 NCBI chrNW_004936572:3,396,329...3,425,848
Ensembl chrNW_004936572:3,421,557...3,425,276 		JBrowse link
G LOC101959799 potassium voltage-gated channel subfamily A member 1 involved_in ISO (PMID:23903368) UniProt PMID:23903368 NCBI chrNW_004937109:142,711...144,257
Ensembl chrNW_004937109:142,711...144,198 		JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:15919495 RGD:7794721 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:20350433 RGD:4892212 NCBI chrNW_004936504:10,960,069...11,056,834
Ensembl chrNW_004936504:10,959,192...11,056,856 		JBrowse link
G Slc41a1 solute carrier family 41 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,640,197...6,662,128
Ensembl chrNW_004936557:6,640,813...6,662,699 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23973266) Ensembl
MGI		 PMID:23973266 GO_REF:0000107 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
cellular response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 ISO RGD PMID:1569388 RGD:13831122 NCBI chrNW_004936474:16,135,076...16,138,930
Ensembl chrNW_004936474:16,135,644...16,145,518 		JBrowse link
G App amyloid beta precursor protein ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:3,968,216...3,980,821
Ensembl chrNW_004936474:3,968,506...3,980,815 		JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:24614235 RGD:11341682 NCBI chrNW_004936565:4,694,294...4,763,661
Ensembl chrNW_004936565:4,694,281...4,763,773 		JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936542:2,514,297...2,539,088
Ensembl chrNW_004936542:2,514,300...2,539,135 		JBrowse link
G Dbh dopamine beta-hydroxylase ISO RGD PMID:19276553 RGD:5129515 NCBI chrNW_004936669:3,302,014...3,326,233
Ensembl chrNW_004936669:3,301,802...3,320,643 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 involved_in ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936646:1,665,019...1,669,212 JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936541:4,613,197...4,705,911
Ensembl chrNW_004936541:4,617,555...4,705,866 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936669:814,330...838,881
Ensembl chrNW_004936669:814,330...839,208 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936587:3,406,055...3,806,956
Ensembl chrNW_004936587:3,405,698...3,804,664 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936492:10,513,908...10,528,281
Ensembl chrNW_004936492:10,513,908...10,528,285 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717 		JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:16568477 PMID:17469137 RGD:12904039 RGD:12904041 NCBI chrNW_004936471:36,547,552...36,601,327
Ensembl chrNW_004936471:36,547,500...36,600,636 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:28232070 RGD:12910738 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
cellular response to mercury ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401 		JBrowse link
G Aqp2 aquaporin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,628,677...7,633,344
Ensembl chrNW_004936512:7,628,495...7,634,107 		JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:11768240 RGD:729934 NCBI chrNW_004936586:1,708,803...1,773,372
Ensembl chrNW_004936586:1,708,684...1,773,383 		JBrowse link
G Nox1 NADPH oxidase 1 ISO RGD PMID:28935286 RGD:329961577 NCBI chrNW_004936584:6,023,960...6,040,041
Ensembl chrNW_004936584:6,024,008...6,039,866 		JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:28935286 RGD:329961577 NCBI chrNW_004936736:230,465...394,859
Ensembl chrNW_004936736:230,476...396,708 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15635608) Ensembl
MGI		 PMID:15635608 GO_REF:0000107 NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721 		JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO RGD PMID:24212999 RGD:13830869 NCBI chrNW_004936520:555,878...588,052
Ensembl chrNW_004936520:556,231...588,752 		JBrowse link
cellular response to potassium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20935152) MGI
Ensembl		 PMID:20935152 GO_REF:0000107 NCBI chrNW_004936548:4,983,461...5,110,693
Ensembl chrNW_004936548:4,987,847...5,108,104 		JBrowse link
G Acta1 actin alpha 1, skeletal muscle ISO RGD PMID:17146758 RGD:1598717 NCBI chrNW_004936484:20,236,320...20,239,385
Ensembl chrNW_004936484:20,236,320...20,239,430 		JBrowse link
G Bdnf brain derived neurotrophic factor ISO RGD PMID:25424568 RGD:11060597 NCBI chrNW_004936540:5,530,081...5,582,765
Ensembl chrNW_004936540:5,529,942...5,585,014 		JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) UniProt PMID:19342457 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:64,866...78,272
Ensembl chrNW_004936549:64,866...78,272 		JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (PMID:26609151) ARUK-UCL PMID:26609151 NCBI chrNW_004936498:11,549,526...13,519,638
Ensembl chrNW_004936498:11,549,386...12,875,986 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:487,918...513,843
Ensembl chrNW_004936595:485,554...513,815 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:15028757 RGD:1300188 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:17298175 RGD:10045993 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:24478344 RGD:10402566 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Kcnj10 potassium inwardly rectifying channel subfamily J member 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:555,948...589,219
Ensembl chrNW_004936740:555,998...586,353 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:14593183 RGD:12790707 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
G Mylk myosin light chain kinase acts_upstream_of_or_within ISO (PMID:18524939) MGI PMID:18524939 NCBI chrNW_004936725:1,418,930...1,594,697
Ensembl chrNW_004936725:1,424,130...1,592,840 		JBrowse link
G Nek7 NIMA related kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,685,619...5,815,094
Ensembl chrNW_004936567:5,685,125...5,808,499 		JBrowse link
G Nptx1 neuronal pentraxin 1 ISO RGD PMID:22279230 RGD:6903322 NCBI chrNW_004936594:4,373,500...4,384,394
Ensembl chrNW_004936594:4,373,473...4,384,461 		JBrowse link
G Nrg1 neuregulin 1 ISO RGD PMID:26043693 RGD:405650602 NCBI chrNW_004936766:1,104,841...1,306,368
Ensembl chrNW_004936766:1,104,728...1,305,972 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:17870059 RGD:10059655 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:21596853 RGD:8547918 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (PMID:11940530) ARUK-UCL PMID:11940530 NCBI chrNW_004936504:1,378,812...1,465,463
Ensembl chrNW_004936504:1,378,810...1,465,623 		JBrowse link
G Sod1 superoxide dismutase 1 ISO RGD PMID:17403136 RGD:8657024 NCBI chrNW_004936500:10,345,154...10,352,873
Ensembl chrNW_004936500:10,345,154...10,352,867 		JBrowse link
G Stk39 serine/threonine kinase 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:11,274,398...11,516,244
Ensembl chrNW_004936469:11,274,409...11,516,752 		JBrowse link
cellular response to zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23716681) Ensembl
MGI		 PMID:23716681 GO_REF:0000107 NCBI chrNW_004936631:3,721,307...3,785,346
Ensembl chrNW_004936631:3,721,313...3,780,892 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:12183328) MGI PMID:12183328 NCBI chrNW_004936471:39,791,633...40,193,049
Ensembl chrNW_004936471:39,791,613...40,187,923 		JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma2 ISO RGD PMID:20371809 RGD:402464051 NCBI chrNW_004936515:1,609,370...1,670,412
Ensembl chrNW_004936515:1,607,722...1,671,336 		JBrowse link
G Glra1 glycine receptor alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:10,816,712...10,896,958
Ensembl chrNW_004936515:10,817,422...10,896,958 		JBrowse link
G Glra2 glycine receptor alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:4,014,897...4,202,625
Ensembl chrNW_004936470:4,014,885...4,202,633 		JBrowse link
G Glra3 glycine receptor alpha 3 involved_in ISO PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chrNW_004936516:5,692,535...5,855,694
Ensembl chrNW_004936516:5,693,894...5,855,755 		JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO (PMID:26375174)
(PMID:23133519)		 MGI PMID:23133519 PMID:26375174 NCBI chrNW_004936469:55,973,001...55,974,070
Ensembl chrNW_004936469:55,972,948...56,169,227 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19240037 RGD:2326029 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,581,409...3,609,714
Ensembl chrNW_004936558:3,579,341...3,609,789 		JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 ISO RGD PMID:9437008 RGD:61647 NCBI chrNW_004936493:5,767,779...5,772,043
Ensembl chrNW_004936493:5,770,103...5,772,326 		JBrowse link
G LOC101974890 metallothionein-1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,878,179...8,879,082
Ensembl chrNW_004936475:8,877,691...8,879,155 		JBrowse link
G LOC101975171 metallothionein-2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,897,736...8,899,499
Ensembl chrNW_004936475:8,897,578...8,899,690 		JBrowse link
G LOC101975452 metallothionein-2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,893,781...8,894,960
Ensembl chrNW_004936475:8,893,805...8,894,960 		JBrowse link
G Mt3 metallothionein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,864,512...8,866,516
Ensembl chrNW_004936475:8,864,675...8,866,506 		JBrowse link
G Mt4 metallothionein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,842,863...8,845,105
Ensembl chrNW_004936475:8,809,813...8,845,137 		JBrowse link
G Mtf1 metal regulatory transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,981,483...20,027,541
Ensembl chrNW_004936474:19,981,466...20,027,536 		JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in ISO PMID:8551329 UniProt PMID:8551329 RGD:61682 NCBI chrNW_004936558:3,062,279...3,077,493
Ensembl chrNW_004936558:3,059,886...3,077,451 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:23582235 RGD:10414068 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642 		JBrowse link
G Tspo translocator protein ISO RGD PMID:18709649 RGD:2317141 NCBI chrNW_004936718:992,301...995,172
Ensembl chrNW_004936718:992,301...995,995 		JBrowse link
G Znf658 zinc finger protein 658 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:1,494,915...1,509,548
Ensembl chrNW_004936487:1,492,904...1,507,449 		JBrowse link
response to manganese-induced endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936712:413,602...454,443
Ensembl chrNW_004936712:414,446...454,449 		JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936495:10,746,687...10,769,304
Ensembl chrNW_004936495:10,745,923...10,773,199 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17413
    response to stimulus 8600
      response to chemical 4611
        response to metal ion 491
          cellular response to metal ion 236
            cellular response to aluminum ion 1
            cellular response to cadmium ion + 28
            cellular response to calcium ion + 81
            cellular response to cesium ion 0
            cellular response to cobalt ion 6
            cellular response to copper ion + 23
            cellular response to iron ion + 14
            cellular response to lead ion 9
            cellular response to lithium ion 25
            cellular response to magnesium ion 10
            cellular response to manganese ion + 21
            cellular response to mercury ion 7
            cellular response to nickel ion 0
            cellular response to platinum ion 0
            cellular response to potassium ion + 21
            cellular response to selenium ion 0
            cellular response to silver ion 0
            cellular response to tellurium ion 0
            cellular response to zinc ion 20
paths to the root