Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of glycogen metabolic process
go back to main search page
Accession:GO:0070873 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glycogen.
Synonyms:exact_synonym: regulation of glycogen metabolism

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcgr glucagon receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:10,674,854...10,682,619
Ensembl chrNW_004624801:10,678,944...10,682,362 		JBrowse link
G Khk ketohexokinase acts_upstream_of_or_within ISO (PMID:22371574) MGI PMID:22371574 NCBI chrNW_004624738:9,189,343...9,205,209
Ensembl chrNW_004624738:9,189,320...9,202,053 		JBrowse link
G Phlda2 pleckstrin homology like domain family A member 2 acts_upstream_of_or_within ISO (PMID:19884348) MGI PMID:19884348 NCBI chrNW_004624767:15,678,897...15,680,656
Ensembl chrNW_004624767:15,679,481...15,679,876 		JBrowse link
G Pomc proopiomelanocortin acts_upstream_of_or_within ISO (PMID:21184805) MGI PMID:21184805 NCBI chrNW_004624738:7,442,223...7,448,513
Ensembl chrNW_004624738:7,442,292...7,445,020 		JBrowse link
G Rubcnl rubicon like autophagy enhancer involved_in ISO (PMID:30704899) UniProt PMID:30704899 NCBI chrNW_004624748:8,605,272...8,652,785 JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:11289049) BHF-UCL PMID:11289049 NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308 		JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chrNW_004624762:3,943,074...4,016,090
Ensembl chrNW_004624762:3,942,972...4,010,498 		JBrowse link
G Grb10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chrNW_004624740:3,562,758...3,668,761
Ensembl chrNW_004624740:3,628,252...3,668,151 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:4,213,430...4,236,930
Ensembl chrNW_004624786:4,214,916...4,236,563 		JBrowse link
G Insr insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chrNW_004624828:345,135...485,856
Ensembl chrNW_004624828:345,135...486,184 		JBrowse link
G LOC101719511 sperm motility kinase Z-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:4,193,061...4,194,145 JBrowse link
G Pask PAS domain containing serine/threonine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:5,215,626...5,246,540
Ensembl chrNW_004624847:5,216,441...5,238,908 		JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within ISO (PMID:15857891) MGI PMID:15857891 NCBI chrNW_004624823:6,184,970...6,196,535
Ensembl chrNW_004624823:6,184,801...6,192,654 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chrNW_004624733:29,545,870...29,661,954
Ensembl chrNW_004624733:29,545,789...29,662,028 		JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035 		JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B involved_in ISO (PMID:22225877) MGI PMID:22225877 NCBI chrNW_004624839:5,228,674...5,240,808
Ensembl chrNW_004624839:5,228,674...5,240,816 		JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004624925:262,590...322,440
Ensembl chrNW_004624925:273,881...326,984 		JBrowse link
G C1qtnf2 C1q and TNF related 2 acts_upstream_of_or_within ISO (PMID:15231994) MGI PMID:15231994 NCBI chrNW_004624733:29,193,020...29,216,557
Ensembl chrNW_004624733:29,193,290...29,215,675 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) ISO RGD PMID:14640889 RGD:1600636 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in ISO (PMID:11311121) UniProt PMID:11311121 NCBI chrNW_004624802:643,783...660,603
Ensembl chrNW_004624802:650,119...660,005 		JBrowse link
G Epm2aip1 EPM2A interacting protein 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:24142699) MGI
TreeGrafter		 PMID:24142699 GO_REF:0000118 NCBI chrNW_004624788:15,102,663...15,110,354
Ensembl chrNW_004624788:15,108,361...15,110,187 		JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO PMID:24481529
(PMID:24481529) 		BHF-UCL PMID:24481529 RGD:12910990 NCBI chrNW_004624734:25,261,493...25,369,092
Ensembl chrNW_004624734:25,261,493...25,430,045 		JBrowse link
G Gck glucokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:7,844,496...7,885,900
Ensembl chrNW_004624740:7,852,390...7,886,758 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:21076856) UniProt PMID:21076856 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Igf2 insulin like growth factor 2 acts_upstream_of ISO (PMID:20032056) BHF-UCL PMID:20032056 NCBI chrNW_004624767:14,969,977...14,997,577
Ensembl chrNW_004624767:14,969,866...14,979,026 		JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035 		JBrowse link
G Insr insulin receptor involved_in
acts_upstream_of 		ISO (PMID:17925406)
(PMID:20032056) 		BHF-UCL PMID:17925406 PMID:20032056 NCBI chrNW_004624828:345,135...485,856
Ensembl chrNW_004624828:345,135...486,184 		JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004624843:1,113,075...1,178,859
Ensembl chrNW_004624843:1,120,974...1,178,859 		JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004624793:2,615,092...2,636,835
Ensembl chrNW_004624793:2,614,589...2,636,947 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934 		JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chrNW_004624839:5,228,674...5,240,808
Ensembl chrNW_004624839:5,228,674...5,240,816 		JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chrNW_004624820:9,246,477...9,255,803
Ensembl chrNW_004624820:9,248,989...9,252,604 		JBrowse link
G Ppp1r3g protein phosphatase 1 regulatory subunit 3G acts_upstream_of_or_within
involved_in 		ISO (PMID:21471512)
(PMID:31553910) 		MGI
FlyBase		 PMID:21471512 PMID:31553910 NCBI chrNW_004624756:20,168,734...20,171,456
Ensembl chrNW_004624756:20,170,051...20,171,010 		JBrowse link
G Pth parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:5,489,857...5,492,777
Ensembl chrNW_004624766:5,489,800...5,492,871 		JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISO (PMID:11001060) BHF-UCL PMID:11001060 NCBI chrNW_004624737:6,646,837...6,875,408
Ensembl chrNW_004624737:6,647,651...6,786,335 		JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 ISO RGD PMID:22998876 RGD:329412477 NCBI chrNW_004624826:5,844,868...5,897,541
Ensembl chrNW_004624826:5,845,001...5,897,497 		JBrowse link
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chrNW_004624733:29,545,870...29,661,954
Ensembl chrNW_004624733:29,545,789...29,662,028 		JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO (PMID:10391216) MGI PMID:10391216 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 involved_in ISO (PMID:33799212) FlyBase PMID:33799212 NCBI chrNW_004624903:2,859,252...3,068,516
Ensembl chrNW_004624903:2,857,378...3,068,534 		JBrowse link
G Phkb phosphorylase kinase regulatory subunit beta involved_in ISO (PMID:36077341) FlyBase PMID:36077341 NCBI chrNW_004624914:1,013,828...1,235,023
Ensembl chrNW_004624914:1,013,145...1,234,610 		JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO (PMID:34083142)
PMID:6615485 		MGI
FlyBase		 PMID:6615485 PMID:34083142 RGD:405650328 NCBI chrNW_004624782:13,864,002...13,880,568
Ensembl chrNW_004624782:13,871,130...13,881,001 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:8940145) BHF-UCL PMID:8940145 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:19250614) UniProt PMID:19250614 NCBI chrNW_004624786:4,213,430...4,236,930
Ensembl chrNW_004624786:4,214,916...4,236,563 		JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171 		JBrowse link
G Ppp1r3a protein phosphatase 1 regulatory subunit 3A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624827:5,543,497...5,581,779
Ensembl chrNW_004624827:5,543,420...5,581,847 		JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:7720853 PMID:11716774 GO_REF:0000118 RGD:2304267 RGD:2306167 NCBI chrNW_004624839:5,228,674...5,240,808
Ensembl chrNW_004624839:5,228,674...5,240,816 		JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:11716774 GO_REF:0000118 RGD:2306167 NCBI chrNW_004624737:2,896,677...2,901,393
Ensembl chrNW_004624737:2,893,256...2,901,452 		JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:11716774 GO_REF:0000118 RGD:2306167 NCBI chrNW_004624741:26,205,076...26,208,158
Ensembl chrNW_004624741:26,207,096...26,207,827 		JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:15752363 GO_REF:0000118 RGD:2306166 NCBI chrNW_004624820:9,246,477...9,255,803
Ensembl chrNW_004624820:9,248,989...9,252,604 		JBrowse link
G Ppp1r3f protein phosphatase 1 regulatory subunit 3F acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:21668450) MGI
TreeGrafter		 PMID:21668450 GO_REF:0000118 NCBI chrNW_004624893:1,012,976...1,030,380
Ensembl chrNW_004624893:1,013,509...1,030,441 		JBrowse link
G Ppp1r3g protein phosphatase 1 regulatory subunit 3G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:20,168,734...20,171,456
Ensembl chrNW_004624756:20,170,051...20,171,010 		JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171 		JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA 		RGD
InterPro		 PMID:7720853 PMID:11716774 GO_REF:0000002 RGD:2304267 RGD:2306167 NCBI chrNW_004624839:5,228,674...5,240,808
Ensembl chrNW_004624839:5,228,674...5,240,816 		JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004624737:2,896,677...2,901,393
Ensembl chrNW_004624737:2,893,256...2,901,452 		JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004624741:26,205,076...26,208,158
Ensembl chrNW_004624741:26,207,096...26,207,827 		JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chrNW_004624820:9,246,477...9,255,803
Ensembl chrNW_004624820:9,248,989...9,252,604 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17646
    cellular process 17217
      regulation of cellular process 11151
        regulation of metabolic process 5926
          regulation of generation of precursor metabolites and energy 151
            regulation of glycogen metabolic process 45
              negative regulation of glycogen metabolic process + 12
              positive regulation of glycogen metabolic process + 26
              regulation of glycogen biosynthetic process + 34
              regulation of glycogen catabolic process + 13
Path 2
Term Annotations click to browse term
  biological_process 17646
    biological regulation 11836
      regulation of biological process 11481
        regulation of cellular process 11151
          regulation of metabolic process 5926
            regulation of primary metabolic process 4964
              regulation of carbohydrate metabolic process 206
                regulation of polysaccharide metabolic process 53
                  regulation of glycogen metabolic process 45
                    negative regulation of glycogen metabolic process + 12
                    positive regulation of glycogen metabolic process + 26
                    regulation of glycogen biosynthetic process + 34
                    regulation of glycogen catabolic process + 13
paths to the root