Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of glycogen metabolic process
go back to main search page
Accession:GO:0070873 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glycogen.
Synonyms:exact_synonym: regulation of glycogen metabolism


show annotations for term's descendants           Sort by:
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcgr glucagon receptor involved_in IMP (PMID:12552113) UniProt PMID:12552113 NCBI chr11:120,420,011...120,429,815
Ensembl chr11:120,421,525...120,429,812 		JBrowse link
G Khk ketohexokinase involved_in
acts_upstream_of_or_within 		IBA
IMP 		(PMID:22371574) GO_Central
MGI		 PMID:22371574 GO_REF:0000033 NCBI chr 5:31,078,780...31,088,592
Ensembl chr 5:31,078,775...31,088,592 		JBrowse link
G Phlda2 pleckstrin homology like domain, family A, member 2 acts_upstream_of_or_within IDA (PMID:19884348) MGI PMID:19884348 NCBI chr 7:143,055,282...143,056,882
Ensembl chr 7:143,055,282...143,056,887 		JBrowse link
G Pomc pro-opiomelanocortin-alpha acts_upstream_of_or_within IMP (PMID:21184805) MGI PMID:21184805 NCBI chr12:4,004,945...4,010,643
Ensembl chr12:4,004,951...4,010,642 		JBrowse link
G Rubcnl RUN and cysteine rich domain containing beclin 1 interacting protein like involved_in IMP (PMID:30704899) UniProt PMID:30704899 NCBI chr14:75,253,467...75,289,977
Ensembl chr14:75,253,467...75,289,972 		JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1810024B03Rik RIKEN cDNA 1810024B03 gene involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:127,028,204...127,050,200
Ensembl chr 2:127,028,275...127,050,200 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 involved_in ISO RGD
GO_Central		 PMID:8349040 GO_REF:0000096 RGD:1625425 NCBI chr 6:87,019,828...87,069,189
Ensembl chr 6:87,019,828...87,069,179 		JBrowse link
G Grb10 growth factor receptor bound protein 10 involved_in ISO
TAS 		(PMID:15664450) GO_Central
BHF-UCL		 PMID:15664450 GO_REF:0000096 NCBI chr11:11,880,499...11,987,428
Ensembl chr11:11,880,508...11,988,683 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP (PMID:31553910) FlyBase PMID:31553910 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446 		JBrowse link
G Inpp5k inositol polyphosphate 5-phosphatase K involved_in IMP
IBA
ISO 		(PMID:19250614) UniProt
GO_Central		 PMID:19250614 GO_REF:0000033 GO_REF:0000119 NCBI chr11:75,519,893...75,539,691
Ensembl chr11:75,521,814...75,539,697 		JBrowse link
G Insr insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Mir15b microRNA 15b acts_upstream_of ISO (PMID:26179126) ARUK-UCL PMID:26179126 NCBI chr 3:68,917,105...68,917,168
Ensembl chr 3:68,917,105...68,917,168 		JBrowse link
G Mir195a microRNA 195a acts_upstream_of ISO (PMID:25240198) ARUK-UCL PMID:25240198 NCBI chr11:70,125,868...70,125,961
Ensembl chr11:70,125,868...70,125,961 		JBrowse link
G Pask PAS domain containing serine/threonine kinase involved_in ISO
IBA
ISS 		GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr 1:93,237,165...93,271,237
Ensembl chr 1:93,236,492...93,271,204 		JBrowse link
G Prkag3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit acts_upstream_of_or_within IMP (PMID:15857891) MGI PMID:15857891 NCBI chr 1:74,778,062...74,788,623
Ensembl chr 1:74,778,081...74,788,380 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenergic receptor, alpha 1b acts_upstream_of_or_within IMP (PMID:14581480) MGI PMID:14581480 NCBI chr11:43,665,432...43,792,076
Ensembl chr11:43,665,433...43,792,037 		JBrowse link
G Ins1 insulin I involved_in ISO GO_Central GO_REF:0000119 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914 		JBrowse link
G Ins2 insulin II involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO MGI GO_REF:0000008 NCBI chr 8:35,842,847...35,855,293
Ensembl chr 8:35,842,893...35,855,293 		JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G C1qtnf2 C1q and tumor necrosis factor related protein 2 acts_upstream_of_or_within IDA (PMID:15231994) MGI PMID:15231994 NCBI chr11:43,364,984...43,382,485
Ensembl chr11:43,365,103...43,382,352 		JBrowse link
G Cd36 CD36 molecule ISO RGD PMID:14640889 RGD:1600636 NCBI chr 5:17,986,680...18,093,828
Ensembl chr 5:17,986,688...18,093,799 		JBrowse link
G Dyrk2 dual-specificity tyrosine phosphorylation regulated kinase 2 involved_in ISO
ISS 		GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr10:118,691,507...118,725,144
Ensembl chr10:118,691,508...118,706,114 		JBrowse link
G Epm2aip1 EPM2A interacting protein 1 acts_upstream_of_or_within
involved_in 		IMP
IBA 		(PMID:24142699) MGI
GO_Central		 PMID:24142699 GO_REF:0000033 NCBI chr 9:111,100,913...111,108,161
Ensembl chr 9:111,100,997...111,108,161 		JBrowse link
G Esrrb estrogen related receptor, beta involved_in ISO
IDA 		(PMID:24481529) GO_Central
BHF-UCL		 PMID:24481529 GO_REF:0000096 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402 		JBrowse link
G Gck glucokinase involved_in ISO
ISS 		GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr11:5,850,816...5,900,081
Ensembl chr11:5,850,820...5,900,081 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
ISS 		GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Igf2 insulin-like growth factor 2 acts_upstream_of IMP (PMID:20032056) BHF-UCL PMID:20032056 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Ins1 insulin I involved_in ISO GO_Central GO_REF:0000119 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914 		JBrowse link
G Ins2 insulin II involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Insr insulin receptor acts_upstream_of
involved_in 		IMP
ISO 		(PMID:20032056) BHF-UCL
GO_Central		 PMID:20032056 GO_REF:0000119 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 1:82,210,826...82,269,160
Ensembl chr 1:82,210,822...82,269,137 		JBrowse link
G Irs2 insulin receptor substrate 2 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:11,034,681...11,058,929
Ensembl chr 8:11,034,681...11,058,458 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IMP (PMID:31553910) FlyBase PMID:31553910 NCBI chr19:4,242,173...4,245,418
Ensembl chr19:4,242,064...4,245,419 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in IMP (PMID:31553910) FlyBase PMID:31553910 NCBI chr 8:35,842,847...35,855,293
Ensembl chr 8:35,842,893...35,855,293 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in ISO GO_Central GO_REF:0000096 NCBI chr14:55,113,054...55,114,995
Ensembl chr14:55,110,126...55,115,007 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G acts_upstream_of_or_within
involved_in 		IMP
IDA 		(PMID:21471512)
(PMID:31553910) 		MGI
FlyBase		 PMID:21471512 PMID:31553910 NCBI chr13:36,142,816...36,154,371
Ensembl chr13:36,142,822...36,154,371 		JBrowse link
G Pth parathyroid hormone involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:112,984,783...112,987,879
Ensembl chr 7:112,984,787...112,987,777 		JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in IMP (PMID:11001060) BHF-UCL PMID:11001060 NCBI chr19:40,280,484...40,502,399
Ensembl chr19:40,283,197...40,502,223 		JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 involved_in ISO
IEA 		RGD
GO_Central
Ensembl		 PMID:22998876 GO_REF:0000096 GO_REF:0000107 RGD:329412477 NCBI chr 1:165,309,114...165,404,347
Ensembl chr 1:165,312,752...165,404,343 		JBrowse link
G Adra1b adrenergic receptor, alpha 1b acts_upstream_of_or_within IMP (PMID:14581480) MGI PMID:14581480 NCBI chr11:43,665,432...43,792,076
Ensembl chr11:43,665,433...43,792,037 		JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within IMP (PMID:10391216) MGI PMID:10391216 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299 		JBrowse link
G Phka1 phosphorylase kinase alpha 1 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr  X:101,557,581...101,687,907
Ensembl chr  X:101,557,581...101,687,852 		JBrowse link
G Phkb phosphorylase kinase beta involved_in IMP (PMID:36077341) FlyBase PMID:36077341 NCBI chr 8:86,567,489...86,790,883
Ensembl chr 8:86,567,588...86,788,005 		JBrowse link
G Phkg1 phosphorylase kinase gamma 1 involved_in ISO (PMID:25340394) MGI PMID:25340394 NCBI chr 5:129,892,272...129,907,953
Ensembl chr 5:129,892,262...129,927,390 		JBrowse link
G Phkg2 phosphorylase kinase, gamma 2 (testis) involved_in IMP (PMID:34083142) MGI PMID:34083142 NCBI chr 7:127,169,252...127,182,479
Ensembl chr 7:127,172,512...127,182,479 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Inpp5k inositol polyphosphate 5-phosphatase K involved_in IMP (PMID:19250614) UniProt PMID:19250614 NCBI chr11:75,519,893...75,539,691
Ensembl chr11:75,521,814...75,539,697 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO RGD
GO_Central		 PMID:17142137 GO_REF:0000096 RGD:1625611 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO RGD
GO_Central		 PMID:7720853 GO_REF:0000096 RGD:2304267 NCBI chr19:4,242,173...4,245,418
Ensembl chr19:4,242,064...4,245,419 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO RGD
GO_Central		 PMID:7720853 GO_REF:0000096 RGD:2304267 NCBI chr 5:32,616,192...32,651,057
Ensembl chr 5:32,616,187...32,674,777 		JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:14,713,821...14,755,273
Ensembl chr 6:14,713,976...14,755,273 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO
IBA 		RGD
GO_Central		 PMID:7720853 PMID:11716774 GO_REF:0000033 GO_REF:0000096 RGD:2304267 RGD:2306167 NCBI chr 8:35,842,847...35,855,293
Ensembl chr 8:35,842,893...35,855,293 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C involved_in ISO
IBA 		RGD
GO_Central		 PMID:11716774 GO_REF:0000033 GO_REF:0000096 RGD:2306167 NCBI chr19:36,709,131...36,714,004
Ensembl chr19:36,709,131...36,714,053 		JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D involved_in ISO
IBA 		RGD
GO_Central		 PMID:11716774 GO_REF:0000033 GO_REF:0000096 RGD:2306167 NCBI chr 2:178,052,999...178,056,256
Ensembl chr 2:178,052,999...178,056,265 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in ISO
IBA 		RGD
GO_Central		 PMID:15752363 GO_REF:0000033 GO_REF:0000096 RGD:2306166 NCBI chr14:55,113,054...55,114,995
Ensembl chr14:55,110,126...55,115,007 		JBrowse link
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:21668450) MGI
GO_Central		 PMID:21668450 GO_REF:0000033 NCBI chr  X:7,424,815...7,440,541
Ensembl chr  X:7,423,535...7,440,522 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:36,142,816...36,154,371
Ensembl chr13:36,142,822...36,154,371 		JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO
IEA 		RGD
GO_Central
Ensembl		 PMID:7720853 GO_REF:0000096 GO_REF:0000107 RGD:2304267 NCBI chr19:4,242,173...4,245,418
Ensembl chr19:4,242,064...4,245,419 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO RGD
GO_Central		 PMID:7720853 GO_REF:0000096 RGD:2304267 NCBI chr 5:32,616,192...32,651,057
Ensembl chr 5:32,616,187...32,674,777 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO RGD
GO_Central		 PMID:7720853 PMID:11716774 GO_REF:0000096 RGD:2304267 RGD:2306167 NCBI chr 8:35,842,847...35,855,293
Ensembl chr 8:35,842,893...35,855,293 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C involved_in ISO RGD
GO_Central		 PMID:11716774 GO_REF:0000096 RGD:2306167 NCBI chr19:36,709,131...36,714,004
Ensembl chr19:36,709,131...36,714,053 		JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D involved_in ISO RGD
GO_Central		 PMID:11716774 GO_REF:0000096 RGD:2306167 NCBI chr 2:178,052,999...178,056,256
Ensembl chr 2:178,052,999...178,056,265 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in ISO RGD
GO_Central		 PMID:15752363 GO_REF:0000096 RGD:2306166 NCBI chr14:55,113,054...55,114,995
Ensembl chr14:55,110,126...55,115,007 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28626
    cellular process 18393
      regulation of cellular process 12647
        regulation of metabolic process 6959
          regulation of generation of precursor metabolites and energy 168
            regulation of glycogen metabolic process 49
              negative regulation of glycogen metabolic process + 15
              positive regulation of glycogen metabolic process + 28
              regulation of glycogen biosynthetic process + 37
              regulation of glycogen catabolic process + 15
Path 2
Term Annotations click to browse term
  biological_process 28626
    biological regulation 13468
      regulation of biological process 13028
        regulation of cellular process 12647
          regulation of metabolic process 6959
            regulation of primary metabolic process 5767
              regulation of carbohydrate metabolic process 229
                regulation of polysaccharide metabolic process 58
                  regulation of glycogen metabolic process 49
                    negative regulation of glycogen metabolic process + 15
                    positive regulation of glycogen metabolic process + 28
                    regulation of glycogen biosynthetic process + 37
                    regulation of glycogen catabolic process + 15
paths to the root