Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of glycogen metabolic process
go back to main search page
Accession:GO:0070873 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glycogen.
Synonyms:exact_synonym: regulation of glycogen metabolism


show annotations for term's descendants           Sort by:
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCGR glucagon receptor involved_in ISO (PMID:12552113) UniProt PMID:12552113 NCBI chr 9:455,744...463,070
Ensembl chr 9:344,438...459,925 		JBrowse link
G KHK ketohexokinase acts_upstream_of_or_within ISO (PMID:22371574) MGI PMID:22371574 NCBI chr17:21,079,907...21,092,510
Ensembl chr17:21,079,907...21,092,510 		JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G POMC proopiomelanocortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:19,431,396...19,438,247
Ensembl chr17:19,431,585...19,434,440 		JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in ISO (PMID:30704899) UniProt PMID:30704899 NCBI chr22:4,874,384...4,903,044
Ensembl chr22:4,874,575...4,903,033 		JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:11289049) BHF-UCL PMID:11289049 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007 		JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr18:1,890,689...2,014,836
Ensembl chr18:1,890,792...2,014,839 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363 		JBrowse link
G INSR insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046 		JBrowse link
G MIR15B microRNA mir-15b acts_upstream_of ISO (PMID:26179126) ARUK-UCL PMID:26179126 NCBI chr34:26,460,663...26,460,722
Ensembl chr34:26,460,645...26,460,741 		JBrowse link
G MIR195 microRNA mir-195 acts_upstream_of ISO (PMID:25240198) ARUK-UCL PMID:25240198 NCBI chr 5:32,045,450...32,045,510
Ensembl chr 5:32,045,450...32,045,510 		JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr25:51,145,094...51,181,040
Ensembl chr25:51,144,912...51,177,818 		JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr37:25,405,794...25,414,745
Ensembl chr37:25,406,190...25,414,961 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999 		JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,359,038...113,407,119
Ensembl chr 1:113,359,575...113,407,131 		JBrowse link
G C1QTNF2 C1q and TNF related 2 acts_upstream_of_or_within ISO (PMID:15231994) MGI PMID:15231994 NCBI chr 4:50,352,245...50,372,412
Ensembl chr 4:50,367,910...50,372,597 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) ISO RGD PMID:14640889 RGD:1600636 NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:9,982,245...9,994,327
Ensembl chr10:9,980,080...9,991,934 		JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr23:6,880,996...6,888,863
Ensembl chr23:6,886,885...6,888,711 		JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529
(PMID:24481529) 		BHF-UCL PMID:24481529 RGD:12910990 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332 		JBrowse link
G GCK glucokinase involved_in IEA Ensembl GO_REF:0000107
G IGF1 insulin like growth factor 1 involved_in IEA
ISS 		Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G IGF2 insulin like growth factor 2 acts_upstream_of ISO (PMID:20032056) BHF-UCL PMID:20032056 NCBI chr18:46,294,036...46,311,982
Ensembl chr18:46,294,019...46,311,982 		JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122 		JBrowse link
G INSR insulin receptor acts_upstream_of
involved_in 		ISO (PMID:20032056)
(PMID:17925406) 		BHF-UCL PMID:17925406 PMID:20032056 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046 		JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:39,624,554...39,687,991 JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,197,016...58,229,026
Ensembl chr22:58,223,387...58,227,535 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524 		JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G acts_upstream_of_or_within
involved_in 		ISO (PMID:21471512)
(PMID:31553910) 		MGI
FlyBase		 PMID:21471512 PMID:31553910
G PTH parathyroid hormone involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr21:36,417,062...36,419,967
Ensembl chr21:36,417,058...36,419,967 		JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISO (PMID:11001060) BHF-UCL PMID:11001060 NCBI chr28:8,834,530...9,063,739
Ensembl chr28:8,837,338...9,063,777 		JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY10 adenylate cyclase 10 ISO RGD PMID:22998876 RGD:329412477 NCBI chr 7:30,576,445...30,660,926
Ensembl chr 7:30,577,591...30,660,926 		JBrowse link
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999 		JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in ISO (PMID:33799212) FlyBase PMID:33799212 NCBI chr  X:56,579,538...56,758,293
Ensembl chr  X:56,581,435...56,757,905 		JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in ISO (PMID:36077341) FlyBase PMID:36077341 NCBI chr 2:67,260,532...67,476,596
Ensembl chr 2:67,254,542...67,476,532 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,418,927...17,428,431
Ensembl chr 6:17,418,926...17,428,359 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999 		JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:53,169,836...53,216,817
Ensembl chr14:53,170,954...53,217,169 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IBA 		RGD
GO_Central		 PMID:7720853 PMID:11716774 GO_REF:0000033 RGD:2304267 RGD:2306167 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in ISO
IBA 		RGD
GO_Central		 PMID:11716774 GO_REF:0000033 RGD:2306167 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in ISO
IBA 		RGD
GO_Central		 PMID:11716774 GO_REF:0000033 RGD:2306167 NCBI chr24:44,550,028...44,551,556
Ensembl chr24:44,550,320...44,551,219 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO
IBA 		RGD
GO_Central		 PMID:15752363 GO_REF:0000033 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524 		JBrowse link
G PPP1R3F protein phosphatase 1 regulatory subunit 3F involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:42,362,335...42,378,480
Ensembl chr  X:42,362,370...42,378,012 		JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA 		RGD
InterPro		 PMID:7720853 PMID:11716774 GO_REF:0000002 RGD:2304267 RGD:2306167 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921 		JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr24:44,550,028...44,551,556
Ensembl chr24:44,550,320...44,551,219 		JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22130
    cellular process 21660
      regulation of cellular process 11828
        regulation of metabolic process 6528
          regulation of generation of precursor metabolites and energy 156
            regulation of glycogen metabolic process 46
              negative regulation of glycogen metabolic process + 13
              positive regulation of glycogen metabolic process + 26
              regulation of glycogen biosynthetic process + 35
              regulation of glycogen catabolic process + 13
Path 2
Term Annotations click to browse term
  biological_process 22130
    biological regulation 12559
      regulation of biological process 12177
        regulation of cellular process 11828
          regulation of metabolic process 6528
            regulation of primary metabolic process 5326
              regulation of carbohydrate metabolic process 217
                regulation of polysaccharide metabolic process 56
                  regulation of glycogen metabolic process 46
                    negative regulation of glycogen metabolic process + 13
                    positive regulation of glycogen metabolic process + 26
                    regulation of glycogen biosynthetic process + 35
                    regulation of glycogen catabolic process + 13
paths to the root