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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of glycogen metabolic process
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Accession:GO:0070873 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glycogen.
Synonyms:exact_synonym: regulation of glycogen metabolism


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regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCGR glucagon receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,205,023...76,220,171
Ensembl chr17:81,912,135...81,922,906 		JBrowse link
G KHK ketohexokinase acts_upstream_of_or_within ISO (PMID:22371574) MGI PMID:22371574 NCBI chr2A:27,085,758...27,099,768
Ensembl chr2A:27,174,896...27,189,308 		JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 acts_upstream_of_or_within ISO (PMID:19884348) MGI PMID:19884348 NCBI chr11:2,953,864...2,954,923 JBrowse link
G POMC proopiomelanocortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:25,161,668...25,165,600
Ensembl chr2A:25,258,768...25,262,706 		JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in ISO (PMID:30704899) UniProt PMID:30704899 NCBI chr13:26,594,545...26,600,412 JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chr2A:69,363,229...69,430,182
Ensembl chr2A:70,488,763...70,551,141 		JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr 7:51,230,945...51,434,560
Ensembl chr 7:51,474,166...51,666,638 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373 		JBrowse link
G INSR insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889 		JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:128,364,745...128,418,837
Ensembl chr2B:247,162,011...247,214,803 		JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:106,085,299...106,139,298
Ensembl chr2B:224,679,831...224,687,705 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 5:155,307,148...155,363,785
Ensembl chr 5:161,923,895...161,979,461 		JBrowse link
G INS insulin involved_in ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:10,059,531...10,074,820 JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,275,799...37,331,971
Ensembl chr19:45,791,800...45,840,271 		JBrowse link
G C1QTNF2 C1q and TNF related 2 acts_upstream_of_or_within ISO (PMID:15231994) MGI PMID:15231994 NCBI chr 5:155,738,893...155,761,650
Ensembl chr 5:162,433,415...162,456,123 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) ISO RGD PMID:14640889 RGD:1600636 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:21,241,325...21,260,321
Ensembl chr12:21,757,436...21,767,505 		JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:36,894,383...36,899,772
Ensembl chr 3:37,187,354...37,189,177 		JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529
(PMID:24481529) 		BHF-UCL PMID:24481529 RGD:12910990 NCBI chr14:56,868,361...57,060,552
Ensembl chr14:75,839,333...76,266,895 		JBrowse link
G GCK glucokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751 		JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (PMID:21076856) UniProt PMID:21076856 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G IGF2 insulin like growth factor 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr11:2,170,190...2,199,442
Ensembl chr11:2,202,743...2,228,890 		JBrowse link
G INS insulin involved_in ISO (PMID:17925406) BHF-UCL PMID:17925406 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666 		JBrowse link
G INSR insulin receptor involved_in
acts_upstream_of 		IEA
ISO 		(PMID:20032056) Ensembl
BHF-UCL		 PMID:20032056 GO_REF:0000107 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889 		JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:113,973,191...114,041,127
Ensembl chr2B:232,849,239...232,852,967 		JBrowse link
G IRS2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chr13:90,886,095...90,917,724 JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO (PMID:31553910) FlyBase PMID:31553910 NCBI chr 8:10,059,531...10,074,820 JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr14:4,118,827...4,122,294
Ensembl chr14:22,215,635...22,216,794 		JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:31553910) Ensembl
FlyBase		 PMID:31553910 GO_REF:0000107 NCBI chr 6:4,918,313...4,920,187
Ensembl chr 6:5,103,955...5,105,031 		JBrowse link
G PTH parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:13,653,777...13,657,901
Ensembl chr11:13,347,838...13,351,802 		JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISO (PMID:11001060) BHF-UCL PMID:11001060 NCBI chr10:91,922,292...92,172,339
Ensembl chr10:95,432,824...95,559,022 		JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY10 adenylate cyclase 10 ISO RGD PMID:22998876 RGD:329412477 NCBI chr 1:143,239,576...143,404,038
Ensembl chr 1:147,023,671...147,129,705 		JBrowse link
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (PMID:14581480) MGI PMID:14581480 NCBI chr 5:155,307,148...155,363,785
Ensembl chr 5:161,923,895...161,979,461 		JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,816,613...61,949,179
Ensembl chr  X:71,900,762...72,033,055 		JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in ISO (PMID:36077341) FlyBase PMID:36077341 NCBI chr16:27,720,300...27,960,740
Ensembl chr16:46,612,053...46,853,157 		JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,211,929...24,221,756
Ensembl chr16:31,115,033...31,127,216 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr2A:28,758,176...28,809,561
Ensembl chr2A:28,862,083...28,889,401 		JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:105,831,567...105,873,793
Ensembl chr 7:118,529,362...118,571,770 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:7720853 PMID:11716774 GO_REF:0000118 RGD:2304267 RGD:2306167 NCBI chr 8:10,059,531...10,074,820 JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:11716774 GO_REF:0000118 RGD:2306167 NCBI chr10:88,377,396...88,382,205
Ensembl chr10:91,900,112...91,904,764 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr20:56,292,457...56,295,977 JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:15752363 GO_REF:0000118 RGD:2306166 NCBI chr14:4,118,827...4,122,294
Ensembl chr14:22,215,635...22,216,794 		JBrowse link
G PPP1R3F protein phosphatase 1 regulatory subunit 3F acts_upstream_of_or_within ISO (PMID:21668450) MGI PMID:21668450 NCBI chr  X:41,569,825...41,587,523 JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:4,918,313...4,920,187
Ensembl chr 6:5,103,955...5,105,031 		JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr2A:28,758,176...28,809,561
Ensembl chr2A:28,862,083...28,889,401 		JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IEA 		RGD
InterPro		 PMID:7720853 PMID:11716774 GO_REF:0000002 RGD:2304267 RGD:2306167 NCBI chr 8:10,059,531...10,074,820 JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr10:88,377,396...88,382,205
Ensembl chr10:91,900,112...91,904,764 		JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr20:56,292,457...56,295,977 JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr14:4,118,827...4,122,294
Ensembl chr14:22,215,635...22,216,794 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    cellular process 18868
      regulation of cellular process 11120
        regulation of metabolic process 6553
          regulation of generation of precursor metabolites and energy 159
            regulation of glycogen metabolic process 44
              negative regulation of glycogen metabolic process + 11
              positive regulation of glycogen metabolic process + 26
              regulation of glycogen biosynthetic process + 33
              regulation of glycogen catabolic process + 13
Path 2
Term Annotations click to browse term
  biological_process 19315
    biological regulation 11857
      regulation of biological process 11476
        regulation of cellular process 11120
          regulation of metabolic process 6553
            regulation of primary metabolic process 5127
              regulation of carbohydrate metabolic process 211
                regulation of polysaccharide metabolic process 53
                  regulation of glycogen metabolic process 44
                    negative regulation of glycogen metabolic process + 11
                    positive regulation of glycogen metabolic process + 26
                    regulation of glycogen biosynthetic process + 33
                    regulation of glycogen catabolic process + 13
paths to the root