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ONTOLOGY REPORT - ANNOTATIONS


Term:detection of stimulus involved in sensory perception of pain
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Accession:GO:0062149 term browser browse the term
Definition:The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal.



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detection of chemical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within
involved_in
ISO
IDA
MGI:2429689|MGI:2451051 (PMID:11754838), (PMID:12060708)
PMID:11120882
RGD PMID:11754838 PMID:12060708 PMID:11120882 RGD:596936209 NCBI chr 4:10,760,509...10,764,987
Ensembl chr 4:10,760,597...10,764,643
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 acts_upstream_of_or_within ISO MGI:3624810|MGI:3692770 (PMID:16564016), (PMID:16630838), (PMID:18272293), (PMID:18297068), (PMID:18398506) RGD PMID:16564016 PMID:16630838 PMID:18272293 PMID:18297068 PMID:18398506 NCBI chr 5:9,163,060...9,217,325
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO MGI:1934023 (PMID:18272293), (PMID:18297068) RGD PMID:18272293 PMID:18297068 NCBI chr10:58,349,936...58,375,021
Ensembl chr10:57,851,428...57,876,513
JBrowse link
detection of mechanical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1 NOT|involved_in ISO (PMID:22634729) RGD PMID:22634729 NCBI chr 1:209,180,755...209,329,413
Ensembl chr 1:199,751,439...199,900,069
JBrowse link
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO MGI:2429689|MGI:2451051 (PMID:11754838), (PMID:12060708) RGD PMID:11754838 PMID:12060708 NCBI chr 4:10,760,509...10,764,987
Ensembl chr 4:10,760,597...10,764,643
JBrowse link
G Bace1 beta-secretase 1 IMP RGD PMID:28012171 RGD:13782150 NCBI chr 8:55,038,842...55,061,138
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IMP RGD PMID:22187436 RGD:13514092 NCBI chr 7:131,663,810...131,676,085
Ensembl chr 7:129,783,674...129,797,074
JBrowse link
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit IMP RGD PMID:15652389 RGD:150530460 NCBI chr 8:64,265,879...64,294,233
Ensembl chr 8:55,369,794...55,398,146
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 4:152,060,781...152,073,628
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:27760212 PMID:28108674 RGD:12910551, RGD:13463594 NCBI chr13:42,630,383...42,634,288
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1930480 (PMID:16190898)
Ensembl
RGD
PMID:16190898 GO_REF:0000107 NCBI chr20:44,322,635...44,514,498
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A NOT|acts_upstream_of_or_within ISO MGI:1928285 (PMID:16190898) RGD PMID:16190898 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO (PMID:16190898) RGD PMID:16190898 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D NOT|acts_upstream_of_or_within ISO MGI:1928298 (PMID:16190898) RGD PMID:16190898 NCBI chr 1:105,443,317...105,483,400
Ensembl chr 1:96,308,365...96,344,793
JBrowse link
G Grm8 glutamate metabotropic receptor 8 IDA RGD PMID:18533199 RGD:6771181 NCBI chr 4:56,771,247...57,696,951
Ensembl chr 4:55,805,955...56,730,831
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:20531396 RGD:7257680 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IDA RGD PMID:21843960 RGD:6482179 NCBI chr 1:243,049,064...243,173,636
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Il18 interleukin 18 IDA RGD PMID:19853379 RGD:2315887 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:18234883 RGD:2303705 NCBI chr 2:48,253,412...48,354,509
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:23473320)
UniProt
RGD
PMID:23473320 GO_REF:0000024 NCBI chr 4:161,150,378...161,160,051
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Mir15b microRNA 15b IDA RGD PMID:28012171 RGD:13782150 NCBI chr 2:155,555,178...155,555,275
Ensembl chr 2:153,245,200...153,245,297
JBrowse link
G Mir338 microRNA 338 IMP RGD PMID:28108674 RGD:13463594 NCBI chr10:105,297,923...105,297,988 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:20351485 RGD:5684352 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:21238854 RGD:9835398 NCBI chr 7:45,531,480...45,611,492
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Phf24 PHD finger protein 24 acts_upstream_of_or_within ISO MGI:5706936 (PMID:25242222) RGD PMID:25242222 NCBI chr 5:57,143,428...57,171,054
Ensembl chr 5:57,142,632...57,168,497
JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in IEA
ISO
GO_REF:0000107
MGI:5608917 (PMID:31534133)
Ensembl
RGD
PMID:31534133 GO_REF:0000107 NCBI chr 8:128,374,441...128,444,718
Ensembl chr 8:119,496,769...119,567,044
JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27281198)
UniProt
Ensembl
RGD
PMID:27281198 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:71,360,840...71,479,870
Ensembl chr 3:50,952,791...51,071,699
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tmem120a transmembrane protein 120A involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:32084332)
UniProt
Ensembl
RGD
PMID:32084332 GO_REF:0000024 GO_REF:0000107 NCBI chr12:26,578,859...26,587,524
Ensembl chr12:20,942,439...20,990,316
JBrowse link
G Tnf tumor necrosis factor IMP RGD PMID:16675114 RGD:7387300 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 acts_upstream_of_or_within ISO MGI:3624810 (PMID:16630838) RGD PMID:16630838 NCBI chr 5:9,163,060...9,217,325
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
detection of temperature stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IMP RGD PMID:20065990 RGD:5129094 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Ano1 anoctamin 1 involved_in ISO UniProtKB:Q704Y3 (PMID:22634729) RGD PMID:22634729 NCBI chr 1:209,180,755...209,329,413
Ensembl chr 1:199,751,439...199,900,069
JBrowse link
G Arrb2 arrestin, beta 2 IMP RGD PMID:21926413 RGD:5509871 NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,146,818...55,154,850
JBrowse link
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO MGI:2451051 (PMID:12060708) RGD PMID:12060708 NCBI chr 4:10,760,509...10,764,987
Ensembl chr 4:10,760,597...10,764,643
JBrowse link
G Calca calcitonin-related polypeptide alpha acts_upstream_of_or_within ISO (PMID:16118273) RGD PMID:16118273 NCBI chr 1:178,312,636...178,317,588
Ensembl chr 1:168,878,214...168,883,105
JBrowse link
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO MGI:2178542 (PMID:20561508) RGD PMID:20561508 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 4:152,060,781...152,073,628
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr13:42,630,383...42,634,288
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of_or_within ISO MGI:3707421 (PMID:20561508) RGD PMID:20561508 NCBI chr19:69,911,548...70,120,970
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19025592)
UniProt
RGD
PMID:19025592 GO_REF:0000024 NCBI chr 8:111,386,432...111,823,759
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:20531396 RGD:7257680 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Lxn latexin acts_upstream_of_or_within ISO MGI:3622076 (PMID:16469302) RGD PMID:16469302 NCBI chr 2:154,037,604...154,043,473
Ensembl chr 2:151,727,102...151,733,460
JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:19805319)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19805319 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:144,279,096...144,323,572
Ensembl chr 3:144,279,096...144,323,572
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574037 (PMID:15741322)
Ensembl
RGD
PMID:15741322 GO_REF:0000107 NCBI chr16:18,080,003...18,087,449
Ensembl chr16:18,046,013...18,053,459
JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO MGI:2448078 (PMID:20561508) RGD PMID:20561508 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:20351485 RGD:5684352 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:15733655 RGD:9743979 NCBI chr 3:187,983,778...188,033,934
Ensembl chr 3:167,606,215...167,656,377
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:17179954 RGD:9835416 NCBI chr 7:45,531,480...45,611,492
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Prdm12 PR/SET domain 12 acts_upstream_of_or_within ISO (PMID:26005867) RGD PMID:26005867 NCBI chr 3:35,322,962...35,341,878
Ensembl chr 3:14,928,628...14,943,331
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO MGI:2180183|MGI:4430300 (PMID:19931571), (PMID:25101983) RGD PMID:19931571 PMID:25101983 NCBI chr 8:128,228,424...128,340,749
Ensembl chr 8:119,350,724...119,462,614
JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in IEA
ISO
GO_REF:0000107
MGI:3818305|MGI:5608917 (PMID:25101983), (PMID:25959819), (PMID:31534133)
Ensembl
RGD
PMID:25101983 PMID:25959819 PMID:31534133 GO_REF:0000107 NCBI chr 8:128,374,441...128,444,718
Ensembl chr 8:119,496,769...119,567,044
JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 involved_in IEA
ISO
GO_REF:0000107
MGI:3053097 (PMID:25101983)
Ensembl
RGD
PMID:25101983 GO_REF:0000107 NCBI chr 3:71,553,185...71,701,377
Ensembl chr 3:51,145,146...51,293,516
JBrowse link
G Scrn3 secernin 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:58,188,820...58,213,623
Ensembl chr 3:58,188,889...58,213,623
JBrowse link
G Tac1 tachykinin, precursor 1 involved_in ISO (PMID:17655832) RGD PMID:17655832 NCBI chr 4:36,645,344...36,653,548
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Tac4 tachykinin precursor 4 involved_in IDA
ISO
PMID:17655832
(PMID:17655832)
RGD PMID:17655832 PMID:17655832 RGD:14695074 NCBI chr10:80,207,824...80,216,156
Ensembl chr10:80,207,610...80,216,156
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 involved_in ISO UniProtKB:Q8BHY3 (PMID:22634729) RGD PMID:22634729 NCBI chr10:58,349,936...58,375,021
Ensembl chr10:57,851,428...57,876,513
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    response to stimulus 11014
      detection of stimulus 1617
        detection of stimulus involved in sensory perception 1515
          detection of stimulus involved in sensory perception of pain 46
            detection of chemical stimulus involved in sensory perception of pain 3
            detection of electrical stimulus involved in sensory perception of pain 0
            detection of mechanical stimulus involved in sensory perception of pain 28
            detection of temperature stimulus involved in sensory perception of pain 27
Path 2
Term Annotations click to browse term
  biological_process 20536
    multicellular organismal process 8969
      system process 3558
        nervous system process 2761
          sensory perception 2084
            sensory perception of pain 108
              detection of stimulus involved in sensory perception of pain 46
                detection of chemical stimulus involved in sensory perception of pain 3
                detection of electrical stimulus involved in sensory perception of pain 0
                detection of mechanical stimulus involved in sensory perception of pain 28
                detection of temperature stimulus involved in sensory perception of pain 27
paths to the root