Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:antifungal innate immune response
go back to main search page
Accession:GO:0061760 term browser browse the term
Definition:An defense response against a fungus mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.


show annotations for term's descendants           Sort by:
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22265677)		 UniProt
Ensembl
RGD		 PMID:22265677 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:237,501,181...237,510,821
Ensembl chr 2:234,840,858...234,850,523 		JBrowse link
G Card9 caspase recruitment domain family, member 9 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22265677), (PMID:24470469), (PMID:25621893), (PMID:26679537), (PMID:29080677), (PMID:32358020), (PMID:33548172)
(PMID:24231284), (PMID:25057046), (PMID:25702837), (PMID:26488816), (PMID:26679537), (PMID:26961233), (PMID:29080677), (PMID:33548172), (PMID:33558980)		 UniProt
Ensembl
RGD		 PMID:22265677 PMID:24231284 PMID:24470469 PMID:25057046 PMID:25621893 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 3:29,569,907...29,578,402
Ensembl chr 3:9,171,815...9,180,237 		JBrowse link
G Clec4a C-type lectin domain family 4, member A involved_in IBA
ISO		 GO_REF:0000033
(PMID:22041900), (PMID:32358020)		 GO_Central
RGD		 PMID:22041900 PMID:32358020 GO_REF:0000033 NCBI chr 4:158,026,138...158,119,904
Ensembl chr 4:156,414,688...156,432,402 		JBrowse link
G Clec4a1 C-type lectin domain family 4, member A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,845,811...157,857,926
Ensembl chr 4:156,173,894...156,186,008 		JBrowse link
G Clec4a2 C-type lectin domain family 4, member A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:156,262,438...156,321,695
Ensembl chr 4:156,262,692...156,321,392 		JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,885,899...157,896,728
Ensembl chr 4:156,214,718...156,224,817 		JBrowse link
G Clec4b2 C-type lectin domain family 4, member B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:158,148,434...158,171,933
Ensembl chr 4:156,462,742...156,486,240 		JBrowse link
G Clec4d C-type lectin domain family 4, member D involved_in ISO
IBA
ISS		 (PMID:23911656)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23911656 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:158,275,287...158,286,978
Ensembl chr 4:156,589,792...156,598,848 		JBrowse link
G Clec4e C-type lectin domain family 4, member E involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:18490740)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:18490740 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:158,292,624...158,298,607
Ensembl chr 4:156,607,614...156,612,767 		JBrowse link
G Clec6a-ps1 C-type lectin domain family 6, member A, pseudogene 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000107		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:158,225,100...158,244,722
Ensembl chr 4:156,539,408...156,558,605
Ensembl chr 4:156,539,408...156,558,605 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:17159984), (PMID:19136564), (PMID:32358020) RGD PMID:17159984 PMID:19136564 PMID:32358020 NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29326275)		 UniProt
RGD		 PMID:29326275 GO_REF:0000024 NCBI chr 8:128,661,294...128,679,048
Ensembl chr 8:119,782,595...119,800,014 		JBrowse link
G Defb4 defensin beta 4 involved_in ISO (PMID:30050988) RGD PMID:30050988 NCBI chr16:77,352,911...77,356,104
Ensembl chr16:70,650,472...70,653,665 		JBrowse link
G Defb44 defensin beta 44 involved_in ISO (PMID:34481960) RGD PMID:34481960 NCBI chr15:37,311,888...37,313,579
Ensembl chr15:37,312,308...37,313,370 		JBrowse link
G Defb5 defensin beta 5 involved_in ISO (PMID:30050988) RGD PMID:30050988 NCBI chr16:77,315,424...77,317,828
Ensembl chr16:70,613,146...70,615,467 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (PMID:22041900) RGD PMID:22041900 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:78,853,450...78,856,652
Ensembl chr 4:77,522,535...77,525,556 		JBrowse link
negative regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO
IEA		 (PMID:18212107)
GO_REF:0000107		 RGD
Ensembl		 PMID:18212107 GO_REF:0000107 NCBI chr  X:157,317,993...157,326,640
Ensembl chr  X:152,165,535...152,175,362 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:33093067)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:33093067 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:60,643,611...60,805,137
Ensembl chr 7:58,756,872...58,848,721 		JBrowse link
positive regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g5 phospholipase A2, group V involved_in ISS
ISO		 GO_REF:0000024
(PMID:19342668)		 UniProt
RGD		 PMID:19342668 GO_REF:0000024 NCBI chr 5:156,324,628...156,393,065
Ensembl chr 5:151,041,340...151,062,658 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO
IEA		 (PMID:30911105)
GO_REF:0000107		 RGD
Ensembl		 PMID:30911105 GO_REF:0000107 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:26488816) RGD PMID:26488816 NCBI chr 5:146,516,349...146,545,015
Ensembl chr 5:141,231,523...141,259,915 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    response to stimulus 11067
      immune response 2236
        innate immune response 1025
          antifungal innate immune response 22
            negative regulation of antifungal innate immune response 2
            positive regulation of antifungal innate immune response 3
            regulation of antifungal innate immune response + 5
Path 2
Term Annotations click to browse term
  biological_process 20558
    response to stimulus 11067
      response to biotic stimulus 1943
        response to external biotic stimulus 1894
          response to other organism 1890
            defense response to other organism 1336
              defense response to symbiont 1112
                innate immune response 1025
                  antifungal innate immune response 22
                    negative regulation of antifungal innate immune response 2
                    positive regulation of antifungal innate immune response 3
                    regulation of antifungal innate immune response + 5
paths to the root