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ONTOLOGY REPORT - ANNOTATIONS

Term:reticulophagy
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Accession:GO:0061709 term browser browse the term
Definition:The selective autohagy process in which parts of the endoplasmic reticulum are loaded into autophagosomes, delivered to the vacuole, and degraded in response to changing cellular conditions.
Synonyms:exact_synonym: ER autophagy;   ER-phagy;   autophagy of the ER;   autophagy of the endoplasmic reticulum;   endoplasmic reticulum autophagy
 related_synonym: ER degradation;   endoplasmic reticulum degradation
 alt_id: GO:1990766


show annotations for term's descendants           Sort by:
reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg2a autophagy related 2A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:212,971,822...212,991,505
Ensembl chr 1:203,542,559...203,562,242 		JBrowse link
G Atg2b autophagy related 2B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:130,286,979...130,357,109
Ensembl chr 6:124,525,523...124,592,015 		JBrowse link
G Atg9a autophagy related 9A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:84,126,071...84,136,723
Ensembl chr 9:76,677,404...76,687,986 		JBrowse link
G Atg9b autophagy related 9B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:11,678,548...11,686,097
Ensembl chr 4:10,786,114...10,793,651 		JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO
IEA		 (PMID:22505714)
GO_REF:0000107		 RGD
Ensembl		 PMID:22505714 GO_REF:0000107 NCBI chr 1:203,137,778...203,154,962
Ensembl chr 1:193,708,167...193,725,359 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO
IEA		 (PMID:32160526)
GO_REF:0000107		 RGD
Ensembl		 PMID:32160526 GO_REF:0000107 NCBI chr 3:138,315,006...138,336,691
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:2176173|MGI:3526069 (PMID:31006538)		 GO_Central
Ensembl
RGD		 PMID:31006538 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:17,948,522...18,012,434
Ensembl chr 5:13,161,648...13,225,560 		JBrowse link
G Retreg1 reticulophagy regulator 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:26040720)
(PMID:34338405)
GO_REF:0000033
GO_REF:0000002
(PMID:26040720), (PMID:31930741)		 GO_Central
RGD
InterPro		 PMID:26040720 PMID:31930741 PMID:34338405 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:78,045,435...78,205,316
Ensembl chr 2:76,335,609...76,493,898 		JBrowse link
G Retreg2 reticulophagy regulator family member 2 acts_upstream_of_or_within ISO
IEA		 (PMID:34338405)
GO_REF:0000107		 RGD
Ensembl		 PMID:34338405 GO_REF:0000107 NCBI chr 9:84,088,935...84,095,072
Ensembl chr 9:76,640,319...76,646,395 		JBrowse link
G Retreg3 reticulophagy regulator family member 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:33826365)
GO_REF:0000107
GO_REF:0000002
(PMID:34338405)		 RGD
Ensembl
InterPro		 PMID:33826365 PMID:34338405 GO_REF:0000002 GO_REF:0000107 NCBI chr10:86,529,048...86,552,873
Ensembl chr10:86,028,774...86,052,692 		JBrowse link
G Snx30 sorting nexin family member 30 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:79,478,804...79,608,118
Ensembl chr 5:74,684,015...74,792,631 		JBrowse link
G Snx7 sorting nexin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:208,528,041...208,612,597
Ensembl chr 2:205,842,837...205,927,763 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:29056340)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:29056340 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,332,119...27,338,335 		JBrowse link
G Tex264 testis expressed 264 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:31006537), (PMID:31006538)
GO_REF:0000107
GO_REF:0000033
(PMID:31006538)		 RGD
Ensembl
GO_Central		 PMID:31006537 PMID:31006538 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:116,174,517...116,201,578
Ensembl chr 8:107,295,806...107,323,232 		JBrowse link
G Uba5 ubiquitin-like modifier activating enzyme 5 involved_in ISO
IEA
ISS		 (PMID:32160526)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:32160526 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:113,544,037...113,559,711
Ensembl chr 8:104,665,046...104,680,894 		JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:32160526)		 UniProt
Ensembl
GO_Central
RGD		 PMID:32160526 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:83,709,329...83,719,762
Ensembl chr13:83,709,330...83,716,076 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISO
IEA
IBA
ISS		 (PMID:32160526)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:32160526 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:32160526)		 UniProt
Ensembl
GO_Central
RGD		 PMID:32160526 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:140,119,722...140,127,866
Ensembl chr 2:137,966,678...137,978,089
Ensembl chr 2:137,966,678...137,978,089 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:51,511,492...51,537,746
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:46,951,038...47,029,844
Ensembl chr10:46,454,030...46,530,407 		JBrowse link
G Ulk3 unc-51 like kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:66,888,820...66,895,380
Ensembl chr 8:57,992,723...57,999,467 		JBrowse link
positive regulation of reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO
ISS
IEA		 (PMID:32851973), (PMID:36543799)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:32851973 PMID:36543799 GO_REF:0000024 GO_REF:0000107 NCBI chr10:82,390,845...82,402,814
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO
IEA		 (PMID:36543799)
GO_REF:0000107		 RGD
Ensembl		 PMID:36543799 GO_REF:0000107 NCBI chr 3:138,315,006...138,336,691
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISO
ISS
IEA		 (PMID:36543799)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:36543799 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
regulation of reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nat8b N-acetyltransferase 8B involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:119,916,909...119,923,544
Ensembl chr 4:118,359,443...118,363,563 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      process utilizing autophagic mechanism 564
        autophagy 564
          macroautophagy 335
            reticulophagy 23
              positive regulation of reticulophagy 3
              regulation of reticulophagy + 4
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        catabolic process 2970
          autophagy 564
            macroautophagy 335
              reticulophagy 23
                positive regulation of reticulophagy 3
                regulation of reticulophagy + 4
paths to the root