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ONTOLOGY REPORT - ANNOTATIONS

Term:glycolytic process through fructose-6-phosphate
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Accession:GO:0061615 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a monosaccharide into pyruvate, occurring through a fructose-6-phosphate intermediate, with the concomitant production of ATP and NADH.
Synonyms:exact_synonym: glycolysis through fructose-6-phosphate
 xref: MetaCyc:PWY-5484


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glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 acts_upstream_of_or_within ISO (PMID:19889946) RGD PMID:19889946 NCBI chr13:42,147,473...42,174,699
Ensembl chr13:42,147,478...42,174,699 		JBrowse link
G Pfkl phosphofructokinase, liver type involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:35530161), (PMID:8172601)
GO_REF:0000107
(PMID:8172601), (PMID:9287040) 		RGD
Ensembl		 PMID:8172601 PMID:9287040 PMID:35530161 GO_REF:0000107 NCBI chr20:10,664,285...10,686,324
Ensembl chr20:10,664,272...10,686,315 		JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:25796446)
GO_REF:0000107
GO_REF:0000108
MGI:3759504 (PMID:17595219), (PMID:2521854)
(PMID:19889946) 		RGD
Ensembl
GOC		 PMID:2521854 PMID:17595219 PMID:19889946 PMID:25796446 GO_REF:0000107 GO_REF:0000108 NCBI chr 7:129,221,679...129,259,192
Ensembl chr 7:129,221,653...129,259,192 		JBrowse link
G Pfkp phosphofructokinase, platelet involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:63,729,743...63,794,026
Ensembl chr17:63,729,780...63,794,018 		JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l13 Bcl2-like 13 acts_upstream_of_or_within ISO
IEA 		(PMID:31266807)
GO_REF:0000107 		RGD
Ensembl		 PMID:31266807 GO_REF:0000107 NCBI chr 4:154,056,116...154,112,890
Ensembl chr 4:154,056,127...154,108,985 		JBrowse link
G Eno1 enolase 1 involved_in ISO
IDA 		(PMID:29775581), (PMID:3529090)
PMID:15041191 		RGD PMID:3529090 PMID:29775581 PMID:15041191 RGD:2302788 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336
Ensembl chr 3:160,719,951...160,731,336 		JBrowse link
G Eno2 enolase 2 involved_in IDA PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr 4:159,258,371...159,267,220
Ensembl chr 4:157,572,088...157,580,980 		JBrowse link
G Eno3 enolase 3 involved_in ISO MGI:1196256 (PMID:27760309) RGD PMID:27760309 NCBI chr10:55,370,531...55,375,921
Ensembl chr10:55,366,975...55,375,921 		JBrowse link
G Foxk1 forkhead box K1 acts_upstream_of ISO
IEA 		(PMID:30700909)
GO_REF:0000107 		RGD
Ensembl		 PMID:30700909 GO_REF:0000107 NCBI chr12:12,110,119...12,175,089
Ensembl chr12:12,115,950...12,175,089 		JBrowse link
G Foxk2 forkhead box K2 acts_upstream_of ISO (PMID:30700909) RGD PMID:30700909 NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:10777777), (PMID:12581789), (PMID:28918937) RGD PMID:10777777 PMID:12581789 PMID:28918937 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235 		JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in ISO
IEA 		(PMID:8417789)
GO_REF:0000107 		RGD
Ensembl		 PMID:8417789 GO_REF:0000107 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086 		JBrowse link
G Hk1 hexokinase 1 involved_in ISO
IEA 		(PMID:4275392)
GO_REF:0000107 		RGD
Ensembl		 PMID:4275392 GO_REF:0000107 NCBI chr20:30,230,488...30,332,099
Ensembl chr20:30,230,486...30,332,131 		JBrowse link
G Hk2 hexokinase 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:29298880) 		Ensembl
RGD		 PMID:29298880 GO_REF:0000107 NCBI chr 4:115,234,509...115,283,530
Ensembl chr 4:115,234,509...115,283,530 		JBrowse link
G Pfkl phosphofructokinase, liver type involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:10,664,285...10,686,324
Ensembl chr20:10,664,272...10,686,315 		JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within 		IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
MGI:1196256 (PMID:27760309), (PMID:28049690), (PMID:4275392)
MGI:4356541 (PMID:19696889) 		Ensembl
GO_Central
RGD		 PMID:4275392 PMID:19696889 PMID:27760309 PMID:28049690 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:129,221,679...129,259,192
Ensembl chr 7:129,221,653...129,259,192 		JBrowse link
G Pfkp phosphofructokinase, platelet involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:63,729,743...63,794,026
Ensembl chr17:63,729,780...63,794,018 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) RGD PMID:12189148 NCBI chr 1:240,723,832...240,731,443
Ensembl chr 1:240,723,920...240,738,452 		JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in ISO
IEA 		(PMID:23951293)
GO_REF:0000107 		RGD
Ensembl		 PMID:23951293 GO_REF:0000107 NCBI chr14:80,681,796...80,683,907
Ensembl chr14:80,681,776...80,683,940 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in ISO
IEA 		MGI:3780541 (PMID:30174313)
GO_REF:0000107 		RGD
Ensembl		 PMID:30174313 GO_REF:0000107 NCBI chr  X:71,271,454...71,287,429
Ensembl chr  X:71,271,440...71,287,418 		JBrowse link
G Pgk1l1 phosphoglycerate kinase 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:42,754,605...42,755,929
Ensembl chr 2:42,754,639...42,755,856 		JBrowse link
G Pkm pyruvate kinase M1/2 involved_in ISO (PMID:28630053) RGD PMID:28630053 NCBI chr 8:60,057,629...60,079,600
Ensembl chr 8:60,057,402...60,079,599 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:4275392) RGD PMID:4275392 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in ISO MGI:3780541 (PMID:30174313) RGD PMID:30174313 NCBI chr 4:157,615,283...157,618,813
Ensembl chr 4:157,615,386...157,619,541 		JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO
IEA 		MGI:4356541 (PMID:19696889)
GO_REF:0000107 		RGD
Ensembl		 PMID:19696889 GO_REF:0000107 NCBI chr 7:129,221,679...129,259,192
Ensembl chr 7:129,221,653...129,259,192 		JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 acts_upstream_of_or_within ISO
IEA 		MGI:2148688 (PMID:10915771)
GO_REF:0000107 		RGD
Ensembl		 PMID:10915771 GO_REF:0000107 NCBI chr10:101,243,146...101,247,323
Ensembl chr10:101,235,994...101,247,337 		JBrowse link
G Galt galactose-1-phosphate uridylyltransferase acts_upstream_of_or_within ISO MGI:2180188 (PMID:11286504) RGD PMID:11286504 NCBI chr 5:56,927,039...56,930,284
Ensembl chr 5:56,926,724...56,930,265 		JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within ISO MGI:97592 (PMID:16155866) RGD PMID:16155866 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086 		JBrowse link
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO MGI:97592 (PMID:15331593), (PMID:16155866) RGD PMID:15331593 PMID:16155866 NCBI chr  X:19,508,522...19,562,165
Ensembl chr  X:19,508,546...19,562,182 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in ISO MGI:4950915 (PMID:32192773) RGD PMID:32192773 NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA
ISO 		GO_REF:0000107
MGI:3610390 (PMID:16155866), (PMID:23292513) 		Ensembl
RGD		 PMID:16155866 PMID:23292513 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) acts_upstream_of_or_within ISO
IEA 		(PMID:18698006)
GO_REF:0000107 		RGD
Ensembl		 PMID:18698006 GO_REF:0000107 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117 		JBrowse link
positive regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in IMP PMID:12230553 FlyBase PMID:12230553 RGD:405650381 NCBI chr  X:19,508,522...19,562,165
Ensembl chr  X:19,508,546...19,562,182 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        generation of precursor metabolites and energy 560
          glycolytic process 154
            glycolytic process through fructose-6-phosphate 27
              glycolytic process from fructose through fructose-6-phosphate 0
              glycolytic process from mannose through fructose-6-phosphate 0
              glycolytic process from sucrose through glucose and fructose 0
              glycolytic process through glucose-6-phosphate + 22
              negative regulation of glycolytic process through fructose-6-phosphate 5
              positive regulation of glycolytic process through fructose-6-phosphate 1
              regulation of glycolytic process through fructose-6-phosphate + 5
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        primary metabolic process 10727
          nucleobase-containing compound metabolic process 5900
            nucleobase-containing small molecule metabolic process 730
              nucleoside phosphate metabolic process 699
                nucleotide metabolic process 540
                  purine nucleotide metabolic process 480
                    purine nucleotide catabolic process 204
                      purine ribonucleotide catabolic process 192
                        ADP catabolic process 159
                          glycolytic process 154
                            glycolytic process through fructose-6-phosphate 27
                              glycolytic process from fructose through fructose-6-phosphate 0
                              glycolytic process from mannose through fructose-6-phosphate 0
                              glycolytic process from sucrose through glucose and fructose 0
                              glycolytic process through glucose-6-phosphate + 22
                              negative regulation of glycolytic process through fructose-6-phosphate 5
                              positive regulation of glycolytic process through fructose-6-phosphate 1
                              regulation of glycolytic process through fructose-6-phosphate + 5
paths to the root