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ONTOLOGY REPORT - ANNOTATIONS


Term:hepaticobiliary system development
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Accession:GO:0061008 term browser browse the term
Definition:The progression of the hepaticobiliary system over time, from its formation to the mature structure. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.
Synonyms:exact_synonym: hepatobiliary system development



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common bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2149672 (PMID:19619492)
Ensembl
RGD
PMID:19619492 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176 JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (PMID:17580084) RGD PMID:17580084 NCBI chr 1:235,190,455...235,196,042 JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4410614 (PMID:19776033)
Ensembl
RGD
PMID:19776033 GO_REF:0000107 NCBI chr10:73,152,599...73,167,451 JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (PMID:19913509) RGD PMID:19913509 NCBI chr 5:15,016,660...15,022,228 JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,651...116,703,354 JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:104,486,748...104,527,284 JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA
(PMID:19944405)
GO_REF:0000107
RGD
Ensembl
PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314 JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:113,500,708...113,541,179 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:5,541,821...5,585,140 JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,129,627 JBrowse link
gallbladder development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (PMID:17580084) RGD PMID:17580084 NCBI chr 1:235,190,455...235,196,042 JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:19242925) RGD PMID:19242925 NCBI chr 2:57,399,443...57,586,770 JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:2179440 (PMID:19913509) RGD PMID:19913509 NCBI chr 5:15,016,660...15,022,228 JBrowse link
hepatic duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (PMID:17580084) RGD PMID:17580084 NCBI chr 1:235,190,455...235,196,042 JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,695...13,104,095 JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (PMID:17580084) RGD PMID:17580084 NCBI chr 1:235,190,455...235,196,042 JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857856 (PMID:18635606)
Ensembl
RGD
PMID:18635606 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888 JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of ISO MGI:3769504 (PMID:18356246) RGD PMID:18356246 NCBI chr12:42,540,378...42,555,490 JBrowse link
hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IEP RGD PMID:11668598 RGD:2306909 NCBI chr 1:227,287,713...227,306,739 JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:12939595 RGD:4144098 NCBI chr 9:76,063,863...76,186,739 JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:17574236 RGD:2306655 NCBI chr 8:66,991,940...66,998,014 JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23064266)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:48,036,881...48,079,055 JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23064264), (PMID:23064266)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23064264 PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:107,701,985...107,720,538 JBrowse link
G Foxh1 forkhead box H1 IEP RGD PMID:22715131 RGD:155791677 NCBI chr 7:108,387,969...108,391,566 JBrowse link
G Frzb frizzled-related protein acts_upstream_of ISO (PMID:19562671) RGD PMID:19562671 NCBI chr 3:65,332,274...65,365,208 JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,695...13,104,095 JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2448661 (PMID:11027604) RGD PMID:11027604 NCBI chr 1:235,190,455...235,196,042 JBrowse link
G Hnf1b HNF1 homeobox B IEP RGD PMID:18286537 RGD:2312718 NCBI chr10:68,735,894...68,789,888 JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP RGD PMID:19621519 RGD:12904750 NCBI chr 3:152,186,787...152,248,320 JBrowse link
G Itga2 integrin subunit alpha 2 IEP RGD PMID:16458388 RGD:2307397 NCBI chr 2:46,520,345...46,621,487 JBrowse link
G Krt18 keratin 18 IEP RGD PMID:24340101 PMID:28941653 RGD:27226712, RGD:27226713 NCBI chr 7:135,036,168...135,039,844 JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:182,348,572...182,354,521 JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,997,853...33,006,691 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:15232737) RGD PMID:15232737 NCBI chr13:104,196,615...104,251,007 JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 acts_upstream_of_or_within ISO MGI:2387974 (PMID:16138077) RGD PMID:16138077 NCBI chr20:12,740,105...12,763,054 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 acts_upstream_of_or_within ISO MGI:2176946|MGI:3606185 (PMID:18722179) RGD PMID:18722179 NCBI chr 1:160,095,108...160,096,401 JBrowse link
G Wnt1 Wnt family member 1 IMP RGD PMID:20413689 RGD:2326223 NCBI chr 7:131,817,558...131,821,605 JBrowse link
hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta involved_in IDA
ISO
IEA
PMID:10635333
(PMID:10635333)
GO_REF:0000107
RGD
Ensembl
PMID:10635333 PMID:10635333 GO_REF:0000107, RGD:10047310 NCBI chr 3:176,817,005...176,818,436 JBrowse link
G Fgl1 fibrinogen-like 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19880967)
UniProt
Ensembl
RGD
PMID:19880967 GO_REF:0000024 GO_REF:0000107 NCBI chr16:51,120,652...51,150,907 JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:8910279)
UniProt
RGD
PMID:8910279 GO_REF:0000024 NCBI chr 4:5,889,999...5,894,575 JBrowse link
G Mki67 marker of proliferation Ki-67 acts_upstream_of_or_within ISO (PMID:25446530) RGD PMID:25446530 NCBI chr 1:199,926,150...199,952,847 JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3617328 (PMID:25446530)
Ensembl
RGD
PMID:25446530 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088 JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO MGI:2386336 (PMID:10888866) RGD PMID:10888866 NCBI chr13:104,196,615...104,251,007 JBrowse link
G Rps6ka1 ribosomal protein S6 kinase A1 involved_in ISS
ISO
GO_REF:0000024
(PMID:10635333)
UniProt
RGD
PMID:10635333 GO_REF:0000024 NCBI chr 5:151,362,819...151,402,064 JBrowse link
G Tgfa transforming growth factor alpha involved_in IDA
ISO
IEA
PMID:10635333
(PMID:10635333)
GO_REF:0000107
RGD
Ensembl
PMID:10635333 PMID:10635333 GO_REF:0000107, RGD:10047310 NCBI chr 4:120,175,549...120,258,342 JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2176228|MGI:5305733 (PMID:18434600) RGD PMID:18434600 NCBI chr14:1,234,272...1,308,492 JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3617328 (PMID:25446530)
Ensembl
RGD
PMID:25446530 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2177602|MGI:2385468 (PMID:19403103) RGD PMID:19403103 NCBI chr10:98,305,744...98,311,250 JBrowse link
liver development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase IDA RGD PMID:10513626 RGD:2301023 NCBI chr12:31,113,098...31,156,411 JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3692446 (PMID:16121256)
Ensembl
RGD
PMID:16121256 GO_REF:0000107 NCBI chr 2:245,518,693...245,542,864 JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 8:53,979,813...54,008,861 JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 1:50,100,840...50,118,886 JBrowse link
G Aco1 aconitase 1 IEP RGD PMID:755797 RGD:11552585 NCBI chr 5:55,259,841...55,315,872 JBrowse link
G Aco2 aconitase 2 IEP RGD PMID:755797 RGD:11552585 NCBI chr 7:113,385,677...113,428,794 JBrowse link
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857117|MGI:2155977 (PMID:7670465), (PMID:7731963)
Ensembl
RGD
PMID:7670465 PMID:7731963 GO_REF:0000107 NCBI chr 3:152,398,745...152,422,854 JBrowse link
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8408243 RGD:8548535 NCBI chr18:57,912,760...57,914,802 JBrowse link
G Afp alpha-fetoprotein IEP RGD PMID:16822301 RGD:2292045 NCBI chr14:17,573,412...17,591,476 JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:10973493), (PMID:7732381), (PMID:8692887) RGD PMID:7732381 PMID:8692887 PMID:10973493 NCBI chr 6:57,961,423...57,998,901 JBrowse link
G Ak2 adenylate kinase 2 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 5:146,609,469...146,649,008 JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 1:236,151,012...236,178,689 JBrowse link
G Ak4 adenylate kinase 4 IEP RGD PMID:9813319 RGD:632174 NCBI chr 5:121,154,565...121,214,403 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 1:218,000,470...218,152,962 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 8:71,877,850...71,957,107 JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:16291827 RGD:2300311 NCBI chr12:40,610,244...40,643,220 JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 IEP RGD PMID:19150623 RGD:2313411 NCBI chr13:82,038,679...82,055,478 JBrowse link
G Aldob aldolase, fructose-bisphosphate B IEP RGD PMID:8641049 RGD:2313428 NCBI chr 5:63,889,045...63,902,086 JBrowse link
G Ang angiogenin IEP RGD PMID:2440105 RGD:2325721 NCBI chr15:24,312,711...24,323,361 JBrowse link
G Arf6 ARF GTPase 6 acts_upstream_of_or_within ISO MGI:3662650 (PMID:16880525) RGD PMID:16880525 NCBI chr 6:93,589,777...93,590,925 JBrowse link
G Arg1 arginase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 1:22,295,093...22,307,720 JBrowse link
G Asl argininosuccinate lyase IEP
IDA
DNA:increased methylation:5' utr RGD PMID:10473900 PMID:9535537 RGD:1599266, RGD:1599268 NCBI chr12:26,659,664...26,677,136 JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP RGD PMID:237754 RGD:2316008 NCBI chr 4:36,752,061...36,769,970 JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:10473900 PMID:9395312 RGD:1599266, RGD:4139912 NCBI chr 3:14,747,355...14,796,909 JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:2443472 (PMID:17699753)
Ensembl
RGD
PMID:17699753 GO_REF:0000107 NCBI chr 3:79,125,814...79,202,896 JBrowse link
G Atf7 activating transcription factor 7 involved_in ISO MGI:109349 (PMID:17699753) RGD PMID:17699753 NCBI chr 7:133,660,491...133,750,902 JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2176073|MGI:3587769 (PMID:15866887) RGD PMID:15866887 NCBI chr 4:149,390,000...149,597,534 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta IEP RGD PMID:8420961 RGD:13792579 NCBI chr 7:515,454...521,858 JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:25349135 RGD:11341669 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase IEP RGD PMID:7575455 RGD:69770 NCBI chr 5:68,647,166...68,656,137 JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 IEP RGD PMID:2806552 RGD:4105456 NCBI chr11:69,302,534...69,343,173 JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP RGD PMID:14160653 RGD:2303538 NCBI chr 6:25,292,133...25,315,078 JBrowse link
G Cadm1 cell adhesion molecule 1 IMP RGD PMID:17326163 RGD:2289097 NCBI chr 8:47,847,836...48,178,703 JBrowse link
G Cast calpastatin IEP RGD PMID:16871587 RGD:5683869 NCBI chr 2:5,707,633...5,817,213 JBrowse link
G Ccnd1 cyclin D1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:209,518,288...209,527,986 JBrowse link
G Ccnd2 cyclin D2 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 4:161,653,048...161,675,422 JBrowse link
G Ccne1 cyclin E1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:99,918,672...99,927,986 JBrowse link
G Cd2ap CD2-associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:29729186)
Ensembl
RGD
PMID:29729186 GO_REF:0000107 NCBI chr 9:18,086,744...18,182,744 JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:30635284)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30635284 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581 JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B IEP RGD PMID:11042273 RGD:7248763 NCBI chr 5:109,123,308...109,134,906 JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha involved_in
acts_upstream_of_or_within
IEP
ISO
ISS
(PMID:8798745)
MGI:2177068 (PMID:17021047)
GO_REF:0000024
RGD
UniProt
PMID:8798745 PMID:17021047 PMID:16172914 GO_REF:0000024, RGD:1625368 NCBI chr 1:87,759,631...87,762,303 JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IEP RGD PMID:1377818 RGD:69946 NCBI chr 3:176,817,005...176,818,436 JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in IEP PMID:1377818 UniProt PMID:1377818 RGD:69946 NCBI chr 1:87,683,060...87,692,772 JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (PMID:10521397) RGD PMID:10521397 NCBI chr 9:36,742,106...36,751,931 JBrowse link
G Chek1_v2 checkpoint kinase 1, variant 2 IEP RGD PMID:11687578 RGD:70230
G Cit citron rho-interacting serine/threonine kinase IEP RGD PMID:12411428 RGD:628497 NCBI chr12:46,263,881...46,425,642 JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within
involved_in
ISO MGI:2385355 (PMID:17644732)
(PMID:17932483)
RGD PMID:17644732 PMID:17932483 NCBI chr 1:12,312,426...12,314,869 JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in IEA
ISO
GO_REF:0000107
(PMID:7586755)
Ensembl
RGD
PMID:7586755 GO_REF:0000107 NCBI chr14:86,828,137...87,060,682 JBrowse link
G Cp ceruloplasmin IEP RGD PMID:2332446 RGD:728241 NCBI chr 2:104,368,336...104,427,119 JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 9:76,063,863...76,186,739 JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:17236583 RGD:1599633 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:12162855 RGD:727721 NCBI chr 8:66,991,940...66,998,014 JBrowse link
G Cyp2d3 cytochrome P450, family 2, subfamily d, polypeptide 3 IEP RGD PMID:9929501 RGD:2301678 NCBI chr 7:113,917,711...113,922,068 JBrowse link
G Dbp D-box binding PAR bZIP transcription factor IEP RGD PMID:2331750 RGD:727680 NCBI chr 1:96,175,796...96,180,745 JBrowse link
G Ddx39b DExD-box helicase 39B IEP RGD PMID:1618789 RGD:632224 NCBI chr20:3,547,702...3,585,064 JBrowse link
G Dut deoxyuridine triphosphatase IEP RGD PMID:11121581 RGD:5133681 NCBI chr 3:112,498,864...112,509,994 JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:12454858 RGD:2289959 NCBI chr14:95,378,626...95,551,358 JBrowse link
G Elk1 ETS transcription factor ELK1 acts_upstream_of_or_within ISO (PMID:31877385) RGD PMID:31877385 NCBI chr  X:3,692,367...3,709,252 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:10231554 RGD:13204733 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Ephx1 epoxide hydrolase 1 IEP RGD PMID:2469391 RGD:4889418 NCBI chr13:95,246,079...95,275,852 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:12454858 RGD:2289959 NCBI chr10:83,907,491...83,931,365 JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3769404 (PMID:22912762), (PMID:28053990)
Ensembl
RGD
PMID:22912762 PMID:28053990 GO_REF:0000107 NCBI chr 5:166,606,841...166,620,124 JBrowse link
G Foxm1 forkhead box M1 acts_upstream_of_or_within ISO MGI:3522201 (PMID:15531365) RGD PMID:15531365 NCBI chr 4:163,325,628...163,338,100 JBrowse link
G Fpgs folylpolyglutamate synthase IEP RGD PMID:1435744 RGD:2315102 NCBI chr 3:36,370,505...36,391,314 JBrowse link
G Fscn1 fascin actin-bundling protein 1 IEP RGD PMID:18855019 RGD:2317768 NCBI chr12:16,710,601...16,723,734 JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3576383 (PMID:15767668)
Ensembl
RGD
PMID:15767668 GO_REF:0000107 NCBI chr18:2,460,909...2,492,322 JBrowse link
G Gfer growth factor, augmenter of liver regeneration involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,718,489...13,721,782 JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IEP RGD PMID:3996734 RGD:2302171 NCBI chr15:18,596,180...18,608,854 JBrowse link
G H19 H19 imprinted maternally expressed transcript IEP RGD PMID:8981228 RGD:1342456 NCBI chr 1:207,160,175...207,162,851 JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2149672 (PMID:15578515)
Ensembl
RGD
PMID:15578515 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176 JBrowse link
G Hgf hepatocyte growth factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16880525)
Ensembl
RGD
PMID:16880525 GO_REF:0000107 NCBI chr 4:19,628,902...19,700,467 JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2177762|MGI:2448661|MGI:2449914 (PMID:10804184), (PMID:11027604), (PMID:15459110), (PMID:16364283) RGD PMID:10804184 PMID:11027604 PMID:15459110 PMID:16364283 NCBI chr 1:235,190,455...235,196,042 JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO MGI:2182089 (PMID:8557196) RGD PMID:8557196 NCBI chr13:96,280,335...96,285,750 JBrowse link
G Hmbs hydroxymethylbilane synthase IDA RGD PMID:971328 RGD:25394583 NCBI chr 8:53,570,364...53,577,758 JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase IEP RGD PMID:13990 RGD:2326149 NCBI chr 5:153,461,738...153,475,552 JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 2:53,379,457...53,399,807 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:8620869 RGD:2326125 NCBI chr 2:185,875,609...185,903,505 JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384429 (PMID:9566924) RGD PMID:9566924 NCBI chr12:47,299,171...47,333,457 JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO MGI:1857856 (PMID:18635606) RGD PMID:18635606 NCBI chr10:68,735,894...68,789,888 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:20102719 RGD:10042969 NCBI chr14:9,918,630...9,938,072 JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:16488668 RGD:10002779 NCBI chr17:6,269,302...6,280,429 JBrowse link
G Hp haptoglobin IDA RGD PMID:16172914 RGD:1625368 NCBI chr19:54,449,151...54,453,701 JBrowse link
G Hras HRas proto-oncogene, GTPase IEP RGD PMID:2581126 RGD:14694813 NCBI chr 1:205,712,625...205,729,406 JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO MGI:2183607 (PMID:12105862) RGD PMID:12105862 NCBI chr 5:168,084,487...168,097,519 JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (PMID:11773599), (PMID:9176412) RGD PMID:9176412 PMID:11773599 NCBI chr15:31,573,325...31,666,068 JBrowse link
G Igf2r insulin-like growth factor 2 receptor IDA RGD PMID:12127995 RGD:2311626 NCBI chr 1:50,526,878...50,615,265 JBrowse link
G Insr insulin receptor IEP RGD PMID:6364984 RGD:14701029 NCBI chr12:5,991,135...6,129,275 JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO MGI:1856923 (PMID:9376320) RGD PMID:9376320 NCBI chr17:19,983,217...20,163,598 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2149630 (PMID:10352021) RGD PMID:10352021 NCBI chr 5:115,009,900...115,012,993 JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO MGI:1857557 (PMID:7753194) RGD PMID:7753194 NCBI chr19:23,250,627...23,253,802 JBrowse link
G Kras KRAS proto-oncogene, GTPase IEP RGD PMID:1526114 RGD:11060153 NCBI chr 4:179,916,255...179,949,613 JBrowse link
G Lbp lipopolysaccharide binding protein IEP RGD PMID:20978830 RGD:9685195 NCBI chr 3:146,953,889...146,981,032 JBrowse link
G Ldha lactate dehydrogenase A IDA RGD PMID:6849973 RGD:1600284 NCBI chr 1:97,371,823...97,381,247 JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO MGI:2451080 (PMID:24370824), (PMID:25147230) RGD PMID:24370824 PMID:25147230 NCBI chr 1:241,437,524...241,470,936 JBrowse link
G Lipc lipase C, hepatic type IEP RGD PMID:11004003 RGD:2307448 NCBI chr 8:71,509,633...71,635,663 JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISS
ISO
GO_REF:0000024
(PMID:15265030)
HGNC
RGD
PMID:15265030 GO_REF:0000024 NCBI chr 1:86,185,769...86,201,952 JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 acts_upstream_of_or_within ISO MGI:2150656 (PMID:16754854) RGD PMID:16754854 NCBI chr 9:111,698,913...111,855,257 JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,641,851...83,685,560 JBrowse link
G Meg3 maternally expressed 3 acts_upstream_of_or_within ISO MGI:3842511 (PMID:19264764) RGD PMID:19264764 NCBI chr 6:128,491,808...128,524,010 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
MGI:1857655 (PMID:7651534)
GO_REF:0000033
RGD
GO_Central
PMID:7651534 PMID:8506951 GO_REF:0000033, RGD:2317549 NCBI chr 4:46,756,823...46,864,041 JBrowse link
G Mpst mercaptopyruvate sulfurtransferase IDA RGD PMID:6573924 RGD:9685558 NCBI chr 7:111,836,079...111,843,651 JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:3587937 (PMID:17183527) RGD PMID:17183527 NCBI chr10:1,116,315...1,278,106 JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (PMID:19632871) RGD PMID:19632871 NCBI chr10:86,001,545...86,009,049 JBrowse link
G Nat1 N-acetyltransferase 1 IEP RGD PMID:18799802 RGD:2303764 NCBI chr16:22,218,217...22,238,516 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:1857444 (PMID:7926784)
GO_REF:0000024
Ensembl
RGD
HGNC-UCL
PMID:7926784 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837 JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:15226394) RGD PMID:15226394 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO MGI:3617328 (PMID:25446530) RGD PMID:25446530 NCBI chr 2:185,610,594...185,744,088 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO MGI:1857409 (PMID:21289032) RGD PMID:21289032 NCBI chr18:3,379,482...3,425,100 JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 IEP RGD PMID:17341476 RGD:401827282 NCBI chr 3:97,614,616...97,632,053 JBrowse link
G Nts neurotensin IEP RGD PMID:8342998 RGD:9743870 NCBI chr 7:37,564,944...37,574,350 JBrowse link
G Onecut1 one cut homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1891408 (PMID:17936262)
Ensembl
RGD
PMID:17936262 GO_REF:0000107 NCBI chr 8:75,599,432...75,633,598 JBrowse link
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within ISO MGI:1196423 (PMID:17936262) RGD PMID:17936262 NCBI chr18:57,831,647...57,890,884 JBrowse link
G Otc ornithine transcarbamylase IEP RGD PMID:8690412 RGD:4144072 NCBI chr  X:15,126,358...15,202,473 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEP
ISO
PMID:12552133
(PMID:12552133)
RGD PMID:12552133 PMID:12552133 RGD:629554 NCBI chr 5:126,440,102...126,462,507 JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within ISO MGI:2388676 (PMID:19619492) RGD PMID:19619492 NCBI chr12:12,793,957...12,799,156 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha acts_upstream_of_or_within ISO MGI:4845856 (PMID:24691033) RGD PMID:24691033 NCBI chr 2:117,103,643...117,177,411 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:1099818 (PMID:21685914) RGD PMID:21685914 NCBI chr10:13,573,779...13,621,138 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within
ISO (PMID:11891195)
MGI:97603 (PMID:21685914)
RGD PMID:11891195 PMID:21685914 NCBI chr14:5,541,821...5,585,140 JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:7327170 RGD:2303137 NCBI chr 8:68,949,731...68,975,394 JBrowse link
G Ppdpf pancreatic progenitor cell differentiation and proliferation factor acts_upstream_of_or_within ISO (PMID:34031390) RGD PMID:34031390 NCBI chr 3:168,299,309...168,301,040 JBrowse link
G Prkcsh PRKCSH beta subunit of glucosidase II acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2155302 (PMID:21685914)
GO_REF:0000033
RGD
GO_Central
PMID:21685914 GO_REF:0000033 NCBI chr 8:28,810,836...28,822,503 JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa acts_upstream_of_or_within IEP
ISO
MGI:2183063 (PMID:9788960) RGD PMID:9788960 PMID:7660357 RGD:1299299 NCBI chr18:24,038,596...24,049,061 JBrowse link
G Pros1 protein S IEP RGD PMID:7660357 RGD:1299299 NCBI chr11:13,676,310...13,757,858 JBrowse link
G Prox1 prospero homeobox 1 involved_in IEP
ISO
(PMID:11789987) RGD PMID:11789987 PMID:16770575 RGD:5133274 NCBI chr13:104,196,615...104,251,007 JBrowse link
G Psmb9 proteasome 20S subunit beta 9 IEP RGD PMID:24707720 RGD:9854625 NCBI chr20:4,668,952...4,674,421 JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 acts_upstream_of_or_within ISO MGI:3830811 (PMID:18729827) RGD PMID:18729827 NCBI chr 2:30,712,276...30,739,968 JBrowse link
G Ptn pleiotrophin IEP RGD PMID:12057922 RGD:727382 NCBI chr 4:66,260,764...66,342,614 JBrowse link
G Qdpr quinoid dihydropteridine reductase IEP RGD PMID:710385 RGD:5128606 NCBI chr14:65,670,251...65,683,853 JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:15388488 RGD:2314298 NCBI chr10:83,883,490...83,928,932 JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 acts_upstream_of_or_within ISO MGI:3690329 (PMID:17015619) RGD PMID:17015619 NCBI chr 5:13,161,648...13,225,560 JBrowse link
G Rcbtb2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO (PMID:26291700) RGD PMID:26291700 NCBI chr15:48,319,809...48,364,441 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:7603567) RGD PMID:7603567 NCBI chr 1:212,354,336...212,364,815 JBrowse link
G Rgn regucalcin IEP RGD PMID:9546611 PMID:8794449 RGD:9590173, RGD:9590212 NCBI chr  X:1,619,030...1,634,456 JBrowse link
G Rhbdd3 rhomboid domain containing 3 acts_upstream_of_or_within ISO MGI:5516031 (PMID:23610400) RGD PMID:23610400 NCBI chr14:79,994,111...80,000,294 JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:31,865,050...31,957,930 JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (PMID:16174759) RGD PMID:16174759 NCBI chr11:45,325,778...45,560,300 JBrowse link
G Rxra retinoid X receptor alpha IEP RGD PMID:14729401 RGD:1643117 NCBI chr 3:31,387,892...31,474,415 JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (PMID:36301669) RGD PMID:36301669 NCBI chr10:52,243,664...52,256,250 JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator acts_upstream_of_or_within ISO MGI:107877|MGI:5442171 (PMID:21685914) RGD PMID:21685914 NCBI chr20:46,245,101...46,314,055 JBrowse link
G Slc25a4 solute carrier family 25 member 4 IEP RGD PMID:9468308 RGD:9681468 NCBI chr16:46,072,935...46,076,730 JBrowse link
G Slco1b2 solute carrier organic anion transporter family member 1B2 IEP RGD PMID:15288467 RGD:2303131 NCBI chr 4:176,282,577...176,355,557 JBrowse link
G Slco2b1 solute carrier organic anion transporter family, member 2b1 IEP RGD PMID:15345472 RGD:2316987 NCBI chr 1:153,959,288...154,007,294 JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO MGI:2386105|MGI:3611933 (PMID:16287714) RGD PMID:16287714 NCBI chr 8:28,438,370...28,535,071 JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:2177602|MGI:2447406 (PMID:17367743) RGD PMID:17367743 NCBI chr 1:50,043,323...50,050,168 JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:135,419,864...135,450,513 JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150 JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:35,514,914...35,548,898 JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:9199345 RGD:11039429 NCBI chr 6:100,605,165...100,610,192 JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:17565389 RGD:2291935 NCBI chr10:85,704,841...85,775,856 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 acts_upstream_of_or_within ISO MGI:2176946|MGI:3606185 (PMID:18722179) RGD PMID:18722179 NCBI chr 1:160,095,108...160,096,401 JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:12773577) RGD PMID:12773577 NCBI chr14:2,634,294...2,810,269 JBrowse link
G Thra thyroid hormone receptor alpha IEP RGD PMID:17496154 RGD:2314319 NCBI chr10:84,198,141...84,225,659 JBrowse link
G Thra_v1 thyroid hormone receptor alpha, variant 1 IEP RGD PMID:17496154 RGD:2314319
G Thra_v2 thyroid hormone receptor alpha, variant 2 IEP RGD PMID:17496154 RGD:2314319
G Tk1 thymidine kinase 1 IEP RGD PMID:995499 RGD:2317236 NCBI chr10:103,533,449...103,544,818 JBrowse link
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 IEP RGD PMID:16310220 PMID:18938141 RGD:2315453, RGD:2317023 NCBI chr 9:96,249,143...96,256,264 JBrowse link
G Ugt1a2 UDP glucuronosyltransferase 1 family, polypeptide A2 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:96,239,019...96,256,264 JBrowse link
G Ugt1a5 UDP glucuronosyltransferase family 1 member A5 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:96,210,053...96,256,264 JBrowse link
G Ugt1a6 UDP glucuronosyltransferase family 1 member A6 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:96,195,018...96,256,264 JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C involved_in IEP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:18938141 GO_REF:0000033, RGD:2317023 NCBI chr 9:88,739,577...88,808,465 JBrowse link
G Ugt1a8 UDP glucuronosyltransferase family 1 member A8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:88,727,094...88,808,465 JBrowse link
G Upb1 beta-ureidopropionase 1 IDA RGD PMID:6870258 RGD:2317093 NCBI chr20:13,216,693...13,243,016 JBrowse link
G Upf2 UPF2, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO MGI:3790198 (PMID:20657840) RGD PMID:20657840 NCBI chr17:72,224,575...72,335,896 JBrowse link
G Urod uroporphyrinogen decarboxylase IEP RGD PMID:6219675 RGD:4145103 NCBI chr 5:135,701,294...135,705,380 JBrowse link
G Vwf von Willebrand factor acts_upstream_of_or_within ISO MGI:1857656 (PMID:7854452) RGD PMID:7854452 NCBI chr 4:160,042,900...160,177,757 JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA
(PMID:15312687)
GO_REF:0000107
RGD
Ensembl
PMID:15312687 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565 JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:10652269)
UniProt
Ensembl
RGD
PMID:10652269 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707 JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (PMID:23117660) RGD PMID:23117660 NCBI chr 5:139,912,395...139,945,532 JBrowse link
liver morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3714267 (PMID:17339333)
Ensembl
RGD
PMID:17339333 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428 JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2451080 (PMID:24370824)
Ensembl
RGD
PMID:24370824 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936 JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO MGI:3617328 (PMID:25446530) RGD PMID:25446530 NCBI chr 2:185,610,594...185,744,088 JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO MGI:5301343 (PMID:21803851) RGD PMID:21803851 NCBI chr 2:221,988,645...222,072,813 JBrowse link
liver regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8855951 RGD:8548508 NCBI chr18:57,912,760...57,914,802 JBrowse link
G Afp alpha-fetoprotein IEP RGD PMID:2460696 RGD:126848734 NCBI chr14:17,573,412...17,591,476 JBrowse link
G Alas2 5'-aminolevulinate synthase 2 IEP RGD PMID:6895999 RGD:11035238 NCBI chr  X:19,463,146...19,486,526 JBrowse link
G Angpt1 angiopoietin 1 IEP RGD PMID:11549276 RGD:704403 NCBI chr 7:75,415,959...75,668,696 JBrowse link
G Ar androgen receptor IEP RGD PMID:2598758 RGD:407424617 NCBI chr  X:63,104,771...63,273,934 JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 IEP RGD PMID:11032760 RGD:13782137 NCBI chr10:58,079,710...58,111,279 JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19435814)
GO_REF:0000107
RGD
Ensembl
PMID:19435814 GO_REF:0000107 NCBI chr 3:181,546,742...181,562,890 JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:21503946 RGD:11531107 NCBI chr13:23,204,464...23,366,900 JBrowse link
G Car3 carbonic anhydrase 3 IDA RGD PMID:19639563 RGD:408427362 NCBI chr 2:88,491,666...88,501,299 JBrowse link
G Ccnd1 cyclin D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23740243)
Ensembl
RGD
PMID:23740243 GO_REF:0000107 NCBI chr 1:209,518,288...209,527,986 JBrowse link
G Cdk2 cyclin dependent kinase 2 IEP RGD PMID:16534847 PMID:15696186 RGD:2289284, RGD:2301349 NCBI chr 7:1,714,392...1,721,964 JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:9727068)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9727068 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:176,817,005...176,818,436 JBrowse link
G Cftr CF transmembrane conductance regulator IEP RGD PMID:1378998 RGD:11567227 NCBI chr 4:47,422,084...47,694,646 JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:15826721 RGD:11344894 NCBI chr11:87,926,376...87,941,533 JBrowse link
G Cpb2 carboxypeptidase B2 IEP RGD PMID:19386599 RGD:7243112 NCBI chr15:50,557,722...50,606,569 JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP RGD PMID:31953200 RGD:25823179 NCBI chr 1:209,993,881...210,056,329 JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:8573159 RGD:11565141 NCBI chr 3:161,170,295...161,217,073 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:8573159 RGD:11565141 NCBI chr19:9,562,340...9,602,136 JBrowse link
G Csnk2b casein kinase 2 beta IEP RGD PMID:8573159 RGD:11565141 NCBI chr20:3,704,833...3,709,999 JBrowse link
G Egfr epidermal growth factor receptor IEP
IMP
RGD PMID:2401457 PMID:20395437 RGD:10395295, RGD:38599218 NCBI chr14:95,378,626...95,551,358 JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:107940 (PMID:25477280) RGD PMID:25477280 NCBI chr10:86,126,023...86,162,001 JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:1097695 (PMID:25477280) RGD PMID:25477280 NCBI chr 4:76,624,399...76,687,362 JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10632538 RGD:8662889 NCBI chr 1:241,212,155...241,245,774 JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:3817019 RGD:728788 NCBI chr 2:170,672,169...170,679,572 JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:16162160 RGD:10402121 NCBI chr12:12,333,050...12,504,750 JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 IEP RGD PMID:18031378 RGD:2302207 NCBI chr12:12,660,035...12,735,584 JBrowse link
G Gfer growth factor, augmenter of liver regeneration IMP RGD PMID:24880092 RGD:9685725 NCBI chr10:13,718,489...13,721,782 JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,695...13,104,095 JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within IEP
ISO
MGI:1857797 (PMID:23740243) RGD PMID:23740243 PMID:22790641 PMID:22024090 RGD:12832760, RGD:12911223 NCBI chr 7:65,042,237...65,054,888 JBrowse link
G Gli3 GLI family zinc finger 3 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Gucd1 guanylyl cyclase domain containing 1 IEP RGD PMID:24743017 RGD:151665336 NCBI chr20:13,145,617...13,156,330 JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:22364558 RGD:8694419 NCBI chr 1:95,298,332...95,300,271 JBrowse link
G Hfe homeostatic iron regulator IEP RGD PMID:22364558 RGD:8694419 NCBI chr17:41,841,302...41,849,359 JBrowse link
G Hgf hepatocyte growth factor IEP RGD PMID:19638569 RGD:2313572 NCBI chr 4:19,628,902...19,700,467 JBrowse link
G Hmox1 heme oxygenase 1 IMP RGD PMID:24815159 RGD:10755743 NCBI chr19:13,452,365...13,479,823 JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IEP RGD PMID:16081591 RGD:1599972 NCBI chr 1:191,842,688...191,845,919 JBrowse link
G Ihh Indian hedgehog signaling molecule IEP RGD PMID:22024090 RGD:12911223 NCBI chr 9:76,504,315...76,510,532 JBrowse link
G Il10 interleukin 10 IEP RGD PMID:11813605 RGD:11049526 NCBI chr13:45,024,921...45,029,586 JBrowse link
G Il18 interleukin 18 IEP RGD PMID:24412291 RGD:14696652 NCBI chr 8:59,802,072...59,829,275 JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:8910279)
UniProt
RGD
PMID:8910279 GO_REF:0000024 NCBI chr 4:5,889,999...5,894,575 JBrowse link
G Insr insulin receptor IEP RGD PMID:23633480 RGD:9685423 NCBI chr12:5,991,135...6,129,275 JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:142,743,401...143,066,505 JBrowse link
G Klkb1 kallikrein B1 IEP RGD PMID:9869390 RGD:7297052 NCBI chr16:46,958,634...46,982,054 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:3335218 RGD:10059623 NCBI chr 7:95,483,105...95,488,031 JBrowse link
G Ncl nucleolin IEP RGD PMID:7490256 RGD:9686389 NCBI chr 9:94,447,559...94,456,083 JBrowse link
G Nfkbia NFKB inhibitor alpha IEP RGD PMID:24446557 RGD:150429839 NCBI chr 6:78,593,844...78,597,307 JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:14635188 RGD:11534994 NCBI chr10:17,741,512...17,751,626 JBrowse link
G Pcna proliferating cell nuclear antigen IEP RGD PMID:7906221 RGD:10448980 NCBI chr 3:139,951,948...139,955,820 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 IEP RGD PMID:191106 RGD:11554175 NCBI chr14:102,877,553...102,908,696 JBrowse link
G Pou2f1 POU class 2 homeobox 1 IEP RGD PMID:1841628 RGD:9743904 NCBI chr13:80,653,602...80,796,279 JBrowse link
G Prmt1 protein arginine methyltransferase 1 IEP RGD PMID:15837430 RGD:2299961 NCBI chr 1:104,595,339...104,605,552 JBrowse link
G Prmt5 protein arginine methyltransferase 5 IEP RGD PMID:15837430 RGD:2299961 NCBI chr15:31,938,927...31,948,318 JBrowse link
G Ptch1 patched 1 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:1,548,449...1,613,461 JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 IEP RGD PMID:7591957 RGD:1599982 NCBI chr 5:76,703,687...76,822,584 JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IEP RGD PMID:9015365 RGD:10003155 NCBI chr 2:195,896,967...195,974,851 JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IEP RGD PMID:22227930 RGD:9850085 NCBI chr 7:128,875,772...128,898,203 JBrowse link
G Reg1a regenerating family member 1 alpha IEP RGD PMID:19284990 RGD:10044030 NCBI chr 4:112,450,466...112,453,130 JBrowse link
G Rgn regucalcin IEP RGD PMID:7759556 RGD:9590197 NCBI chr  X:1,619,030...1,634,456 JBrowse link
G Rpl10 ribosomal protein L10 IEP RGD PMID:6121318 RGD:11038709 NCBI chr  X:157,205,850...157,208,057 JBrowse link
G Rpl13 ribosomal protein L13 IEP RGD PMID:6121318 RGD:11038709 NCBI chr19:68,062,442...68,065,065 JBrowse link
G Rpl18 ribosomal protein L18 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:105,325,269...105,327,911 JBrowse link
G Rpl19 ribosomal protein L19 IEP RGD PMID:6121318 RGD:11038709 NCBI chr10:83,022,503...83,026,030 JBrowse link
G Rpl30 ribosomal protein L30 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 7:67,533,420...67,536,555 JBrowse link
G Rpl32 ribosomal protein L32 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 4:148,864,048...148,867,612 JBrowse link
G Rpl7 ribosomal protein L7 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 5:8,000,446...8,003,454 JBrowse link
G Rps15 ribosomal protein S15 IEP RGD PMID:2829897 RGD:11040696 NCBI chr 7:9,416,003...9,417,442 JBrowse link
G Rps16 ribosomal protein S16 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:83,643,066...83,646,056 JBrowse link
G Rps24 ribosomal protein S24 IEP RGD PMID:7612009 RGD:11041663 NCBI chr16:95,429...101,146 JBrowse link
G Serpina10 serpin family A member 10 IEP RGD PMID:8670294 RGD:729731 NCBI chr 6:122,756,106...122,764,544 JBrowse link
G Shh sonic hedgehog signaling molecule IEP RGD PMID:22790641 RGD:12832760 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Slc22a4 solute carrier family 22 member 4 IEP RGD PMID:16343078 RGD:2303088 NCBI chr10:38,133,333...38,179,932 JBrowse link
G Slc22a5 solute carrier family 22 member 5 IEP RGD PMID:16343078 RGD:2303088 NCBI chr10:38,008,303...38,035,474 JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:9882595 RGD:151357002 NCBI chr19:66,843,808...66,872,412 JBrowse link
G Slco1a5 solute carrier organic anion transporter family, member 1A5 IEP RGD PMID:16343078 RGD:2303088 NCBI chr 4:175,172,390...175,254,598 JBrowse link
G Slco1a6 solute carrier organic anion transporter family, member 1a6 IEP RGD PMID:16343078 RGD:2303088 NCBI chr 4:175,072,143...175,107,950 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IEP RGD PMID:23633480 RGD:9685423 NCBI chr10:73,335,519...73,342,549 JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:7686911 RGD:729792 NCBI chr 6:100,605,165...100,610,192 JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within ISO MGI:3587954 (PMID:23740243) RGD PMID:23740243 NCBI chr 3:154,822,079...154,904,566 JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:25862490 RGD:11073669 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:9178702 RGD:14995465 NCBI chr20:3,626,685...3,629,303 JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:2707640 RGD:2317422 NCBI chr 9:120,760,057...120,776,149 JBrowse link
G Ucp2 uncoupling protein 2 IEP RGD PMID:19104935 RGD:7204431 NCBI chr 1:164,251,373...164,257,742 JBrowse link
G Vtn vitronectin IDA RGD PMID:10988248 RGD:10003090 NCBI chr10:63,394,732...63,397,812 JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12217600 RGD:727737 NCBI chr 4:160,042,900...160,177,757 JBrowse link
G Wdr35 WD repeat domain 35 IEP RGD PMID:18472094 RGD:11553927 NCBI chr 6:31,771,315...31,831,450 JBrowse link
negative regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frzb frizzled-related protein acts_upstream_of_or_within ISO (PMID:19562671) RGD PMID:19562671 NCBI chr 3:65,332,274...65,365,208 JBrowse link
negative regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A IMP RGD PMID:24190239 RGD:11252157 NCBI chr 5:109,100,763...109,114,448 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP
ISO
ISS
PMID:15467833
(PMID:15467833)
GO_REF:0000024
RGD
UniProt
PMID:15467833 PMID:15467833 GO_REF:0000024, RGD:11059592 NCBI chr 1:90,171,401...90,187,810 JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:19386599 RGD:7243112 NCBI chr15:50,557,722...50,606,569 JBrowse link
G Lims1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO MGI:2385067 (PMID:24058607) RGD PMID:24058607 NCBI chr20:26,851,364...26,961,607 JBrowse link
G Lims2 LIM zinc finger domain containing 2 acts_upstream_of_or_within ISO MGI:1195263 (PMID:24058607) RGD PMID:24058607 NCBI chr18:23,553,937...23,592,137 JBrowse link
G Smo smoothened, frizzled class receptor IMP RGD PMID:22994359 RGD:150521663 NCBI chr 4:59,311,084...59,341,280 JBrowse link
positive regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IMP RGD PMID:19229878 RGD:8885195 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Foxa3 forkhead box A3 IMP RGD PMID:9878541 RGD:2315086 NCBI chr 1:87,790,111...87,800,259 JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (PMID:18593560) RGD PMID:18593560 NCBI chr 1:143,147,671...143,149,189 JBrowse link
positive regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:16033771 RGD:11341689 NCBI chr 9:67,679,502...67,747,226 JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr18:30,937,670...31,023,786 JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr10:17,706,011...17,737,702 JBrowse link
G Hpn hepsin involved_in ISO
ISS
IEA
(PMID:15614436)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15614436 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,337,085...86,352,785 JBrowse link
G Il18 interleukin 18 IDA RGD PMID:24412291 RGD:14696652 NCBI chr 8:59,802,072...59,829,275 JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:142,743,401...143,066,505 JBrowse link
G Mdk midkine involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:15482347)
UniProt
Ensembl
RGD
PMID:15482347 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:77,901,134...77,903,997 JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2176946|MGI:3511276 (PMID:17438330) RGD PMID:17438330 NCBI chr10:83,641,851...83,685,560 JBrowse link
G Ptn pleiotrophin involved_in IDA
IEA
ISO
GO_REF:0000107
(PMID:15482347)
Ensembl
RGD
PMID:15482347 PMID:16226713 GO_REF:0000107, RGD:9834996 NCBI chr 4:66,260,764...66,342,614 JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:23299899)
UniProt
RGD
PMID:23299899 GO_REF:0000024 NCBI chr14:103,450,074...103,497,687 JBrowse link
G Tnf tumor necrosis factor IMP
IDA
with PCB 126 or TCDD RGD PMID:9111198 PMID:17557910 RGD:14995469, RGD:14995481 NCBI chr20:3,626,685...3,629,303 JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:15962316) RGD PMID:15962316 NCBI chr 1:15,528,921...15,543,993 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:23740243) RGD PMID:23740243 NCBI chr10:44,533,734...44,577,919 JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10652269)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10652269 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707 JBrowse link
regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:23740243) RGD PMID:23740243 NCBI chr 7:65,042,237...65,054,888 JBrowse link
G Ifng interferon gamma IDA RGD PMID:15799032 RGD:8142374 NCBI chr 7:55,789,180...55,793,216 JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:17587687 RGD:6484147 NCBI chr15:3,505,485...3,511,987 JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within ISO MGI:3587954 (PMID:23740243) RGD PMID:23740243 NCBI chr 3:154,822,079...154,904,566 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    multicellular organismal process 8969
      multicellular organism development 5329
        system development 4611
          hepaticobiliary system development 291
            common bile duct development + 7
            gallbladder development 3
            liver development + 288
Path 2
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure development 6609
        multicellular organism development 5329
          system development 4611
            hepaticobiliary system development 291
              common bile duct development + 7
              gallbladder development 3
              liver development + 288
paths to the root