ONTOLOGY REPORT - ANNOTATIONS
Term: dendritic spine morphogenesis
Accession: GO:0060997
browse the term
Definition: The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
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Cdc42
cell division cycle 42
involved_in
ISS ISO
GO_REF:0000024 (PMID:25851601)
UniProt RGD
PMID:25851601
GO_REF:0000024
NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
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Ctnnd2
catenin delta 2
involved_in
ISO IEA
(PMID:25807484) GO_REF:0000107
RGD Ensembl
PMID:25807484
GO_REF:0000107
NCBI chr 2:82,879,469...83,727,409
Ensembl chr 2:81,167,117...82,015,764
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Dip2a
disco-interacting protein 2 homolog A
involved_in
ISO
(PMID:31600191)
RGD
PMID:31600191
NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217
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Dlg4
discs large MAGUK scaffold protein 4
involved_in
IMP ISO IEA
PMID:21525273 (PMID:20952458) GO_REF:0000107
RGD Ensembl
PMID:20952458 PMID:21525273
GO_REF:0000107, RGD:8554095
NCBI chr10:55,239,397...55,267,780
Ensembl chr10:54,739,470...54,767,153
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Dock10
dedicator of cytokinesis 10
involved_in
ISO IBA
(PMID:25851601) GO_REF:0000033
RGD GO_Central
PMID:25851601
GO_REF:0000033
NCBI chr 9:89,291,936...89,549,871
Ensembl chr 9:81,843,604...82,101,525
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Dvl1
dishevelled segment polarity protein 1
involved_in
IGI
PMID:21670302
ParkinsonsUK-UCL
PMID:21670302
RGD:10449514
NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:166,456,686...166,468,664
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Epha5
EPH receptor A5
involved_in
IDA
PMID:20824214
UniProt
PMID:20824214
RGD:8554330
NCBI chr14:24,007,400...24,374,854
Ensembl chr14:23,653,393...24,017,317
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Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:14691139) (PMID:17310244)
UniProt RGD
PMID:14691139 PMID:17310244
GO_REF:0000024
NCBI chr 8:111,386,432...111,823,759
Ensembl chr 8:102,507,549...102,944,839
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Ephb2
Eph receptor B2
acts_upstream_of_or_within involved_in
ISO
(PMID:17310244) (PMID:14691139)
RGD
PMID:14691139 PMID:17310244
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059
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Ephb3
Eph receptor B3
involved_in
ISO
(PMID:14691139)
RGD
PMID:14691139
NCBI chr11:93,345,098...93,363,775
Ensembl chr11:79,840,668...79,859,370
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Hdac6
histone deacetylase 6
acts_upstream_of_or_within
ISO
(PMID:24113571)
RGD
PMID:24113571
NCBI chr X:17,222,538...17,244,373
Ensembl chr X:14,551,044...14,572,441
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Myo5b
myosin Vb
IMP
RGD
PMID:18984164
RGD:11533643
NCBI chr18:70,313,717...70,613,918
Ensembl chr18:68,038,759...68,338,745
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Pak3
p21 (RAC1) activated kinase 3
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25851601) GO_REF:0000107
UniProt RGD Ensembl
PMID:25851601
GO_REF:0000024 GO_REF:0000107
NCBI chr X:111,912,967...112,171,037
Ensembl chr X:107,260,898...107,368,314
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Prmt3
protein arginine methyltransferase 3
IMP
RGD
PMID:20647003
RGD:9491824
NCBI chr 1:99,492,712...99,581,774
Ensembl chr 1:99,492,724...99,579,435
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Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:18082964), (PMID:21411674)
RGD
PMID:18082964 PMID:21411674
NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
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Septin7
septin 7
acts_upstream_of_or_within
ISO
(PMID:24113571)
RGD
PMID:24113571
NCBI chr 8:31,995,597...32,059,069
Ensembl chr 8:23,716,030...23,783,243
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Shank1
SH3 and multiple ankyrin repeat domains 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18272690)
BHF-UCL RGD
PMID:18272690
GO_REF:0000024
NCBI chr 1:103,944,416...103,993,887
Ensembl chr 1:94,808,276...94,855,824
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Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 (PMID:21167025), (PMID:21423165), (PMID:21558424) MGI:5056336 (PMID:21558424) GO_REF:0000107
BHF-UCL RGD Ensembl
PMID:21167025 PMID:21423165 PMID:21558424
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
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Wasl
WASP like actin nucleation promoting factor
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:25851601) GO_REF:0000024
Ensembl RGD UniProt
PMID:25851601
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:54,049,081...54,097,653
Ensembl chr 4:53,083,536...53,132,022
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Wnt7a
Wnt family member 7A
involved_in
ISO
(PMID:21670302) UniProtKB:Q9WVB9 (PMID:21670302)
RGD
PMID:21670302
NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
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Zfp365
zinc finger protein 365
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25983680) GO_REF:0000107
UniProt RGD Ensembl
PMID:25983680
GO_REF:0000024 GO_REF:0000107
NCBI chr20:20,665,122...20,688,607
Ensembl chr20:20,666,240...20,691,238
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Dnm3
dynamin 3
IDA
RGD
PMID:17880892
RGD:8553820
NCBI chr13:76,892,381...77,371,346
Ensembl chr13:74,359,213...74,838,108
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Dtnbp1
dystrobrevin binding protein 1
IMP IDA
RGD
PMID:20531346 PMID:20531346
RGD:11251757 , RGD:11251757
NCBI chr17:19,891,313...19,982,770
Ensembl chr17:19,685,215...19,776,661
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Efna1
ephrin A1
involved_in
ISS ISO
GO_REF:0000024 (PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024
NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866
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Ngef
neuronal guanine nucleotide exchange factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024
NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914
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Nlgn1
neuroligin 1
involved_in
ISO IEA ISS
UniProtKB:Q99K10 (PMID:23143522) GO_REF:0000107 GO_REF:0000024
RGD Ensembl BHF-UCL
PMID:23143522
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464
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Nlgn3
neuroligin 3
involved_in
ISO
(PMID:21808020)
RGD
PMID:21808020
NCBI chr X:70,469,251...70,497,380
Ensembl chr X:66,429,458...66,451,876
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Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:16675393)
RGD
PMID:16675393
NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
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Twf1
twinfilin actin-binding protein 1
IMP
RGD
PMID:33963280
RGD:596938166
NCBI chr 7:127,595,210...127,607,821
Ensembl chr 7:125,716,015...125,727,894
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Ube3a
ubiquitin protein ligase E3A
IMP
RGD
PMID:25867122
RGD:11079590
NCBI chr 1:119,204,244...119,297,097
Ensembl chr 1:110,070,480...110,157,250
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Actr2
actin related protein 2
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr14:98,500,119...98,535,092
Ensembl chr14:94,296,443...94,340,524
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Actr3
actin related protein 3
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr13:39,353,413...39,396,509
Ensembl chr13:36,800,093...36,844,124
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Afdn
afadin, adherens junction formation factor
IMP
RGD
PMID:22948147
RGD:13838731
NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:53,905,373...54,034,216
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Baiap2
BAR/IMD domain containing adaptor protein 2
IMP
RGD
PMID:15673667
RGD:9684988
NCBI chr10:105,721,371...105,788,549
Ensembl chr10:105,223,090...105,290,134
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Camk2b
calcium/calmodulin-dependent protein kinase II beta
involved_in
IMP
PMID:12873385
UniProt
PMID:12873385
RGD:8553829
NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994
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Caprin1
cell cycle associated protein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20516077)
UniProt Ensembl RGD
PMID:20516077
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:90,153,620...90,230,502
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Caprin2
caprin family member 2
involved_in
ISO
(PMID:20516077)
RGD
PMID:20516077
NCBI chr 4:183,537,935...183,592,162
Ensembl chr 4:181,806,575...181,860,830
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Cask
calcium/calmodulin dependent serine protein kinase
IMP
RGD
PMID:18606847
RGD:11576294
NCBI chr X:11,572,328...11,915,831
Ensembl chr X:8,899,833...9,238,694
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Cux2
cut-like homeobox 2
involved_in
ISO
(PMID:20510857)
RGD
PMID:20510857
NCBI chr12:40,168,402...40,368,303
Ensembl chr12:34,520,959...34,705,806
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Dbn1
drebrin 1
involved_in
IMP IEA ISS IBA ISO
GO_REF:0000107 GO_REF:0000024 GO_REF:0000033 (PMID:25865831)
Ensembl UniProt GO_Central RGD
PMID:25865831 PMID:19174472
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:10398809
NCBI chr17:9,155,729...9,170,121
Ensembl chr17:9,150,659...9,164,984
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Dbnl
drebrin-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:84,880,085...84,895,122
Ensembl chr14:80,666,124...80,681,155
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Dhx36
DEAH-box helicase 36
involved_in
IMP
PMID:23651854
UniProt
PMID:23651854
RGD:13792545
NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572
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Dnm1l
dynamin 1-like
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:98,084,049...98,135,663
Ensembl chr11:84,581,216...84,631,482
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Eef2k
eukaryotic elongation factor-2 kinase
IMP
RGD
PMID:20427644
RGD:10401235
NCBI chr 1:184,824,420...184,888,048
Ensembl chr 1:175,393,154...175,455,164
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Ephb2
Eph receptor B2
IMP
RGD
PMID:21364901
RGD:127285794
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059
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Gprasp3
G protein-coupled receptor associated sorting protein family member 3
involved_in
ISO
(PMID:21199326)
RGD
PMID:21199326
NCBI chr X:103,639,366...103,644,561
Ensembl chr X:98,817,593...98,854,545
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Il1rapl1
interleukin 1 receptor accessory protein-like 1
involved_in
ISO
(PMID:21940441)
RGD
PMID:21940441
NCBI chr X:51,371,969...52,876,726
Ensembl chr X:51,378,215...52,876,772
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Itpka
inositol-trisphosphate 3-kinase A
acts_upstream_of_or_within
IMP
PMID:19890013
MGI
PMID:19890013
RGD:8553536
NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
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Kalrn
kalirin, RhoGEF kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4358076 (PMID:19625617)
Ensembl RGD
PMID:19625617
GO_REF:0000107
NCBI chr11:79,703,345...80,309,210
Ensembl chr11:66,198,173...66,797,610
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Lrp8
LDL receptor related protein 8
involved_in
ISO
(PMID:21852430)
RGD
PMID:21852430
NCBI chr 5:127,792,236...127,864,207
Ensembl chr 5:122,563,453...122,631,352
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Mapre3
microtubule-associated protein, RP/EB family, member 3
IDA
RGD
PMID:31092585
RGD:597538596
NCBI chr 6:31,233,736...31,278,626
Ensembl chr 6:25,513,800...25,558,881
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Marcks
myristoylated alanine rich protein kinase C substrate
IMP
RGD
PMID:16202710
RGD:9685333
NCBI chr20:42,240,185...42,245,882
Ensembl chr20:40,685,315...40,691,012
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Mfn1
mitofusin 1
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 2:117,240,525...117,288,017
Ensembl chr 2:115,313,401...115,359,640
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Mfn2
mitofusin 2
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342
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Opa1
OPA1, mitochondrial dynamin like GTPase
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109
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Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in
ISO
(PMID:23483716)
RGD
PMID:23483716
NCBI chr10:60,031,441...60,090,259
Ensembl chr10:59,534,117...59,591,808
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Pak3
p21 (RAC1) activated kinase 3
IMP
RGD
PMID:18481281
RGD:7775053
NCBI chr X:111,912,967...112,171,037
Ensembl chr X:107,260,898...107,368,314
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Ptprd
protein tyrosine phosphatase, receptor type, D
involved_in
ISO
(PMID:21940441)
RGD
PMID:21940441
NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:90,048,966...92,369,396
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Reln
reelin
involved_in
IEA ISO
GO_REF:0000107 (PMID:21664258), (PMID:21852430)
Ensembl RGD
PMID:21664258 PMID:21852430
GO_REF:0000107
NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211
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Slc30a1
solute carrier family 30 member 1
IMP
RGD
PMID:25319628
RGD:11057402
NCBI chr13:106,022,019...106,025,892
Ensembl chr13:103,491,037...103,494,910
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Srcin1
SRC kinase signaling inhibitor 1
IDA
RGD
PMID:31092585
RGD:597538596
NCBI chr10:82,502,911...82,569,882
Ensembl chr10:82,504,393...82,571,040
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Stau2
staufen double-stranded RNA binding protein 2
IMP
RGD
PMID:16418534
RGD:10043163
NCBI chr 5:7,623,528...7,868,206
Ensembl chr 5:2,840,765...3,084,929
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Tiam1
TIAM Rac1 associated GEF 1
IMP
RGD
PMID:16474385
RGD:10043325
NCBI chr11:42,517,527...42,866,280
Ensembl chr11:29,031,348...29,159,901
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Abi2
abl-interactor 2
involved_in
ISO
(PMID:15572692)
RGD
PMID:15572692
NCBI chr 9:69,321,072...69,490,630
Ensembl chr 9:61,827,139...61,905,699
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Abi3bp
ABI family member 3 binding protein
involved_in
IMP
PMID:22485184
ARUK-UCL
PMID:22485184
RGD:42721990
NCBI chr11:57,381,282...57,597,989
Ensembl chr11:43,913,043...44,128,929
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Adam10
ADAM metallopeptidase domain 10
IMP
RGD
PMID:22328515
RGD:13703034
NCBI chr 8:80,226,862...80,358,728
Ensembl chr 8:71,345,837...71,477,889
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Arc
activity-regulated cytoskeleton-associated protein
involved_in
IGI
PMID:15537891
ARUK-UCL
PMID:15537891
RGD:13210528
NCBI chr 7:108,444,959...108,448,413
Ensembl chr 7:106,555,785...106,559,378
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Arhgap33
Rho GTPase activating protein 33
IMP
RGD
PMID:24003235
RGD:13508596
NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678
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Arhgap44
Rho GTPase activating protein 44
involved_in
IBA ISO
GO_REF:0000033 (PMID:24352656)
GO_Central RGD
PMID:24352656
GO_REF:0000033
NCBI chr10:50,154,724...50,322,027
Ensembl chr10:49,655,584...49,824,297
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Cdk5
cyclin-dependent kinase 5
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:17143272) GO_REF:0000107
UniProt RGD Ensembl
PMID:17143272
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112
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Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024
NCBI chr10:65,981,692...65,985,831
Ensembl chr10:65,483,941...65,488,456
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Cfl1
cofilin 1
involved_in
ISO ISS
(PMID:24464040) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:24464040
GO_REF:0000024
NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587
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Dnm3
dynamin 3
IMP
RGD
PMID:15741233
RGD:8554738
NCBI chr13:76,892,381...77,371,346
Ensembl chr13:74,359,213...74,838,108
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Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024
NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139
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Kif1a
kinesin family member 1A
involved_in
IMP
PMID:30021165
UniProt
PMID:30021165
RGD:14995321
NCBI chr 9:101,010,447...101,094,891
Ensembl chr 9:93,563,045...93,647,480
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Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO ISS
(PMID:21168496) UniProtKB:P23528 (PMID:24464040) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:21168496 PMID:24464040
GO_REF:0000024
NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:122,826,696...122,987,703
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Lzts3
leucine zipper tumor suppressor family member 3
involved_in
IMP IBA
PMID:27252646 GO_REF:0000033
GO_Central
PMID:27252646
GO_REF:0000033, RGD:13210540
NCBI chr 3:138,303,378...138,313,645
Ensembl chr 3:117,851,702...117,860,081
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Nlgn3
neuroligin 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:21808020)
BHF-UCL RGD
PMID:21808020 PMID:21808020
GO_REF:0000024, RGD:8553412
NCBI chr X:70,469,251...70,497,380
Ensembl chr X:66,429,458...66,451,876
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Pdlim5
PDZ and LIM domain 5
involved_in
IDA
PMID:19900557
UniProt
PMID:19900557
RGD:8554803
NCBI chr 2:233,625,478...233,793,582
Ensembl chr 2:230,952,248...231,120,275
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Ppfia2
PTPRF interacting protein alpha 2
involved_in
ISO
(PMID:30021165)
RGD
PMID:30021165
NCBI chr 7:43,652,258...44,126,555
Ensembl chr 7:41,765,575...42,239,599
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Ppp1r9a
protein phosphatase 1, regulatory subunit 9A
IMP
RGD
PMID:15473970
RGD:10043779
NCBI chr 4:33,936,949...34,258,927
Ensembl chr 4:33,024,450...33,286,907
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Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:21795692)
Ensembl RGD
PMID:21795692 PMID:21795692
GO_REF:0000107, RGD:7349315
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
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Sipa1l1
signal-induced proliferation-associated 1 like 1
involved_in
IDA
PMID:11502259
UniProt
PMID:11502259
RGD:8554032
NCBI chr 6:107,570,569...107,849,613
Ensembl chr 6:101,839,404...102,116,950
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Srcin1
SRC kinase signaling inhibitor 1
involved_in
ISO IBA IEA ISS
(PMID:19146815) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:19146815
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:82,502,911...82,569,882
Ensembl chr10:82,504,393...82,571,040
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Tanc2
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
involved_in
IMP IBA
PMID:30021165 GO_REF:0000033
GO_Central
PMID:30021165
GO_REF:0000033, RGD:14995321
NCBI chr10:91,052,860...91,373,291
Ensembl chr10:90,553,002...90,868,756
G
Zdhhc15
zinc finger DHHC-type palmitoyltransferase 15
involved_in
IMP
PMID:31189538
UniProt
PMID:31189538
RGD:25671406
NCBI chr X:69,568,086...69,701,756
Ensembl chr X:69,574,124...69,701,756
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all