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ONTOLOGY REPORT - ANNOTATIONS

Term:left/right pattern formation
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Accession:GO:0060972 term browser browse the term
Definition:The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.

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left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within ISO (PMID:23742838) MGI PMID:23742838 NCBI chrNW_004624824:1,299,426...1,352,019
Ensembl chrNW_004624824:1,300,137...1,351,129 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 NOT|acts_upstream_of_or_within ISO (PMID:21203428) MGI PMID:21203428 NCBI chrNW_004624736:5,721,984...5,730,558
Ensembl chrNW_004624736:5,722,404...5,730,633 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944400) BHF-UCL PMID:19944400 NCBI chrNW_004624746:3,412,888...3,441,710 JBrowse link
G Dpcd deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within ISO (PMID:20080492) MGI PMID:20080492 NCBI chrNW_004624831:1,087,270...1,107,197
Ensembl chrNW_004624831:1,087,292...1,107,197 		JBrowse link
G Foxj1 forkhead box J1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO (PMID:17027958) MGI PMID:17027958 NCBI chrNW_004624731:41,321,574...41,390,133
Ensembl chrNW_004624731:41,322,033...41,388,570 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within 		ISS
ISO 		(PMID:32203821), (PMID:32966817) CAFA
MGI		 PMID:32203821 PMID:32966817 GO_REF:0000024 NCBI chrNW_004624907:397,008...438,091
Ensembl chrNW_004624907:397,008...438,091 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) MGI PMID:34486668 NCBI chrNW_004624782:7,455,770...7,513,931 JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:20080492) MGI PMID:20080492 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:20080492) MGI PMID:20080492 NCBI chrNW_004624740:5,619,253...5,703,032 JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO (PMID:16801545) MGI PMID:16801545 NCBI chrNW_004624790:5,509,541...5,515,240
Ensembl chrNW_004624790:5,509,311...5,515,266 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:23184148)
(PMID:23303524) 		MGI PMID:23184148 PMID:23303524 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chrNW_004624740:5,619,253...5,703,032 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO (PMID:31887266) MGI PMID:31887266 NCBI chrNW_004624786:10,742,842...10,745,381
Ensembl chrNW_004624786:10,741,929...10,745,359 		JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944405) BHF-UCL PMID:19944405 NCBI chrNW_004624746:3,412,888...3,441,710 JBrowse link
G Dnaaf19 dynein axonemal assembly factor 19 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chrNW_004624795:404,102...407,025
Ensembl chrNW_004624795:404,068...406,979 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within 		ISS
ISO 		(PMID:18043505) UniProt
MGI		 PMID:18043505 GO_REF:0000024 NCBI chrNW_004624907:397,008...438,091
Ensembl chrNW_004624907:397,008...438,091 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) BHF-UCL PMID:9354794 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (PMID:15750185) MGI PMID:15750185 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in ISO (PMID:15466485) BHF-UCL PMID:15466485 NCBI chrNW_004624901:534,828...538,923
Ensembl chrNW_004624901:535,137...538,384 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (PMID:11076684) MGI PMID:11076684 NCBI chrNW_004624733:34,731,671...34,733,759
Ensembl chrNW_004624733:34,731,671...34,733,759 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (PMID:9576835) MGI PMID:9576835 NCBI chrNW_004624769:5,035,669...5,038,333
Ensembl chrNW_004624769:5,033,932...5,038,343 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within 		ISS
ISO 		(PMID:18043505) UniProt
MGI		 PMID:18043505 GO_REF:0000024 NCBI chrNW_004624907:397,008...438,091
Ensembl chrNW_004624907:397,008...438,091 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in ISO (PMID:26437028) UniProt PMID:26437028 NCBI chrNW_004624737:21,395,963...21,402,925
Ensembl chrNW_004624737:21,385,497...21,402,897 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (PMID:25192045) MGI PMID:25192045 NCBI chrNW_004624828:3,207,935...3,218,795
Ensembl chrNW_004624828:3,208,153...3,218,637 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO (PMID:10349618) MGI PMID:10349618 NCBI chrNW_004624785:13,058,520...13,066,607
Ensembl chrNW_004624785:13,058,444...13,066,719 		JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in ISO (PMID:15466485) BHF-UCL PMID:15466485 NCBI chrNW_004624901:534,828...538,923
Ensembl chrNW_004624901:535,137...538,384 		JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:17507406) BHF-UCL PMID:17507406 NCBI chrNW_004624754:4,557,407...4,564,580
Ensembl chrNW_004624754:4,557,952...4,564,644 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:11,380,656...11,460,566
Ensembl chrNW_004624778:11,384,769...11,501,078 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921 		JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:24585447) MGI PMID:24585447 NCBI chrNW_004624793:11,162,835...11,167,497
Ensembl chrNW_004624793:11,163,916...11,167,457 		JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein axonemal heavy chain 11 acts_upstream_of_or_within ISO (PMID:18414654) MGI PMID:18414654 NCBI chrNW_004624739:8,810,127...9,136,044
Ensembl chrNW_004624739:8,811,082...9,135,815 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:11959836) UniProt PMID:11959836 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:7,929,997...8,004,235
Ensembl chrNW_004624732:7,929,583...8,005,072 		JBrowse link
G Acvr1c activin A receptor type 1C NOT|acts_upstream_of_or_within ISO (PMID:15485907) MGI PMID:15485907 NCBI chrNW_004624732:8,130,970...8,247,528
Ensembl chrNW_004624732:8,130,962...8,247,289 		JBrowse link
G Acvr2a activin A receptor type 2A acts_upstream_of_or_within ISO (PMID:16991118) MGI PMID:16991118 NCBI chrNW_004624866:539,967...619,575
Ensembl chrNW_004624866:539,894...620,302 		JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:16991118)
(PMID:9242489) 		MGI PMID:9242489 PMID:16991118 NCBI chrNW_004624731:2,557,993...2,600,250
Ensembl chrNW_004624731:2,566,063...2,600,035 		JBrowse link
G Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624776:230,565...280,584
Ensembl chrNW_004624776:231,610...280,488 		JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624825:2,157,158...2,214,115
Ensembl chrNW_004624825:2,157,158...2,212,971 		JBrowse link
G Ap1b1 adaptor related protein complex 1 subunit beta 1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624747:5,703,647...5,755,344
Ensembl chrNW_004624747:5,704,477...5,755,321 		JBrowse link
G Arl13b ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chrNW_004624789:6,710,858...6,783,097
Ensembl chrNW_004624789:6,710,681...6,783,667 		JBrowse link
G Bicc1 BicC family RNA binding protein 1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624791:4,732,581...5,057,912 JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO (PMID:24947469)
(PMID:25807483) 		MGI PMID:24947469 PMID:25807483 NCBI chrNW_004624755:16,252,488...16,361,794
Ensembl chrNW_004624755:16,252,582...16,355,053 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:28182636) MGI PMID:28182636 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624837:7,054,659...7,138,840
Ensembl chrNW_004624837:7,054,813...7,138,097 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 involved_in ISO (PMID:26531781) UniProt PMID:26531781 NCBI chrNW_004624778:13,841,227...13,891,946
Ensembl chrNW_004624778:13,839,310...13,891,714 		JBrowse link
G Ciroz ciliated left-right organizer protein containing ZP-N domains acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624818:1,799,997...1,826,300
Ensembl chrNW_004624818:1,809,875...1,826,350 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15750185) UniProt PMID:15750185 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 acts_upstream_of_or_within ISO (PMID:24091014) MGI PMID:24091014 NCBI chrNW_004624754:18,525,285...18,633,823
Ensembl chrNW_004624754:18,526,332...18,587,557 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (PMID:15466485) MGI PMID:15466485 NCBI chrNW_004624901:534,828...538,923
Ensembl chrNW_004624901:535,137...538,384 		JBrowse link
G Daw1 dynein assembly factor with WD repeats 1 acts_upstream_of_or_within ISO (PMID:28289722)
(PMID:25807483) 		MGI PMID:25807483 PMID:28289722 NCBI chrNW_004624843:2,058,443...2,105,646
Ensembl chrNW_004624843:2,058,330...2,108,045 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:12421714) 		MGI PMID:12421714 PMID:15755804 NCBI chrNW_004624835:5,316,620...5,468,179
Ensembl chrNW_004624835:5,316,585...5,468,156 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:12730124) MGI PMID:12730124 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404 		JBrowse link
G Dnaaf19 dynein axonemal assembly factor 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:404,102...407,025
Ensembl chrNW_004624795:404,068...406,979 		JBrowse link
G Dnaaf3 dynein axonemal assembly factor 3 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624832:2,081,239...2,087,833
Ensembl chrNW_004624832:2,082,494...2,087,537 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:25807483) MGI
TreeGrafter		 PMID:25807483 GO_REF:0000118 NCBI chrNW_004624731:6,215,798...6,270,210
Ensembl chrNW_004624731:6,215,737...6,241,793 		JBrowse link
G Dnah11 dynein axonemal heavy chain 11 acts_upstream_of_or_within ISO (PMID:12142464), (PMID:18022865), (PMID:22184204), (PMID:22499950)
(PMID:25807483)
(PMID:10556073)
(PMID:9353118)
(PMID:27340223) 		SYSCILIA_CCNET
MGI		 PMID:9353118 PMID:10556073 PMID:12142464 PMID:18022865 PMID:22184204 More... MGI:48750 NCBI chrNW_004624739:8,810,127...9,136,044
Ensembl chrNW_004624739:8,811,082...9,135,815 		JBrowse link
G Dnah5 dynein axonemal heavy chain 5 acts_upstream_of_or_within ISO (PMID:11788826), (PMID:17515466), (PMID:22499950)
(PMID:25807483)
(PMID:11912187)
(PMID:28289722) 		SYSCILIA_CCNET
MGI		 PMID:11788826 PMID:11912187 PMID:17515466 PMID:22499950 PMID:25807483 More... NCBI chrNW_004624751:10,799,102...11,110,180
Ensembl chrNW_004624751:10,799,892...11,050,403 		JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 acts_upstream_of_or_within ISO (PMID:11231901), (PMID:17515466), (PMID:22499950)
(PMID:25807483) 		SYSCILIA_CCNET
MGI		 PMID:11231901 PMID:17515466 PMID:22499950 PMID:25807483 NCBI chrNW_004624736:38,858,918...38,922,092
Ensembl chrNW_004624736:38,859,050...38,922,097 		JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 acts_upstream_of_or_within ISO (PMID:18950741) SYSCILIA_CCNET PMID:18950741 NCBI chrNW_004624801:4,252,779...4,284,432
Ensembl chrNW_004624801:4,252,814...4,280,227 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624831:1,087,270...1,107,197
Ensembl chrNW_004624831:1,087,292...1,107,197 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624738:8,540,863...8,599,386
Ensembl chrNW_004624738:8,541,063...8,599,491 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO (PMID:16229832), (PMID:25807483)
(PMID:15755804), (PMID:16061793) 		MGI PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 NCBI chrNW_004624918:1,730,675...2,071,231
Ensembl chrNW_004624918:1,730,708...2,071,072 		JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 acts_upstream_of_or_within ISO (PMID:15371312) MGI PMID:15371312 NCBI chrNW_004624738:25,245,792...25,298,397
Ensembl chrNW_004624738:25,245,890...25,283,706 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:10411502) MGI PMID:10411502 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11493558) MGI PMID:11493558 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO (PMID:12642485) MGI PMID:12642485 NCBI chrNW_004624735:12,384,728...12,388,234
Ensembl chrNW_004624735:12,386,281...12,387,774 		JBrowse link
G Foxj1 forkhead box J1 involved_in
acts_upstream_of_or_within 		IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486 		JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chrNW_004624746:29,776...44,825
Ensembl chrNW_004624746:29,776...44,741 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624913:616,283...712,040
Ensembl chrNW_004624913:621,203...711,493 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chrNW_004624738:9,510,452...9,546,985
Ensembl chrNW_004624738:9,510,512...9,545,933 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (PMID:15930098) MGI PMID:15930098 NCBI chrNW_004624790:10,674,002...10,726,292
Ensembl chrNW_004624790:10,678,911...10,726,265 		JBrowse link
G Ift74 intraflagellar transport 74 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624736:31,188,963...31,308,872
Ensembl chrNW_004624736:31,188,987...31,306,815 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:10804177)
(PMID:15755804) 		MGI PMID:10804177 PMID:15755804 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:10220415) 		MGI PMID:10220415 PMID:15755804 NCBI chrNW_004624733:39,354,360...39,406,574
Ensembl chrNW_004624733:39,354,232...39,407,121 		JBrowse link
G Megf8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624907:397,008...438,091
Ensembl chrNW_004624907:397,008...438,091 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO (PMID:21045211)
(PMID:19776033) 		MGI PMID:19776033 PMID:21045211 NCBI chrNW_004624871:50,688...63,772
Ensembl chrNW_004624871:51,122...63,742 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in
acts_upstream_of_or_within 		ISO (PMID:26429889), (PMID:26437028)
(PMID:26437028)
(PMID:25807483) 		UniProt
MGI		 PMID:25807483 PMID:26429889 PMID:26437028 NCBI chrNW_004624737:21,395,963...21,402,925
Ensembl chrNW_004624737:21,385,497...21,402,897 		JBrowse link
G Nek8 NIMA related kinase 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:1,303,283...1,314,188
Ensembl chrNW_004624786:1,303,308...1,314,188 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO (PMID:15329346) MGI PMID:15329346 NCBI chrNW_004624755:18,070,706...18,073,847
Ensembl chrNW_004624755:18,070,740...18,072,883 		JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:28182636)
(PMID:12231623)
(PMID:16496285)
(PMID:15466485)
(PMID:11311163)
(PMID:12642485), (PMID:12654299) 		MGI PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 PMID:15466485 More... NCBI chrNW_004624754:4,557,407...4,564,580
Ensembl chrNW_004624754:4,557,952...4,564,644 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:12730124)
(PMID:7789282) 		MGI PMID:7789282 PMID:12730124 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO (PMID:12730124) MGI PMID:12730124 NCBI chrNW_004624772:15,572,350...15,726,312
Ensembl chrNW_004624772:15,571,998...15,726,426 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO (PMID:17884984), (PMID:22357932)
(PMID:20350929) 		MGI PMID:17884984 PMID:20350929 PMID:22357932 NCBI chrNW_004624762:430,981...439,422 JBrowse link
G Nphp3 nephrocystin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 acts_upstream_of_or_within ISO (PMID:23849778)
(PMID:25807483) 		SYSCILIA_CCNET
MGI		 PMID:23849778 PMID:25807483 NCBI chrNW_004624805:6,192,843...6,365,982
Ensembl chrNW_004624805:6,193,217...6,362,776 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (PMID:25192045)
(PMID:31383820)
(PMID:25807483) 		SYSCILIA_CCNET
MGI		 PMID:25192045 PMID:25807483 PMID:31383820 NCBI chrNW_004624828:3,207,935...3,218,795
Ensembl chrNW_004624828:3,208,153...3,218,637 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624811:3,453,218...3,862,970 JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 acts_upstream_of_or_within ISO (PMID:10809672) MGI PMID:10809672 NCBI chrNW_004624768:3,336,374...3,517,697
Ensembl chrNW_004624768:3,331,207...3,516,394 		JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:34715025) Ensembl
UniProt		 PMID:34715025 GO_REF:0000107 NCBI chrNW_004624760:3,095,656...3,112,545
Ensembl chrNW_004624760:3,109,127...3,112,526 		JBrowse link
G Pierce2 piercer of microtubule wall 2 involved_in ISO (PMID:34715025) UniProt PMID:34715025 NCBI chrNW_004624853:138,153...139,077 JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within
involved_in 		ISO (PMID:11493526), (PMID:24091014)
(PMID:9708732)
(PMID:12397115)
(PMID:10498698)
(PMID:10572050)
(PMID:10499586) 		MGI
BHF-UCL		 PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 More... NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624740:5,619,253...5,703,032 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within ISO (PMID:12062060) MGI PMID:12062060 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793 		JBrowse link
G Pskh1 protein serine kinase H1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:18,450,197...18,485,102
Ensembl chrNW_004624746:18,450,195...18,468,080 		JBrowse link
G Rfx3 regulatory factor X3 acts_upstream_of_or_within ISO (PMID:15121860) MGI PMID:15121860 NCBI chrNW_004624736:8,001,078...8,301,856
Ensembl chrNW_004624736:8,003,234...8,161,150 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO (PMID:17531978) MGI PMID:17531978 NCBI chrNW_004624799:10,750,928...10,755,797 JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17553904) MGI PMID:17553904 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115 		JBrowse link
G Rttn rotatin acts_upstream_of_or_within ISO (PMID:11900971) MGI PMID:11900971 NCBI chrNW_004624806:11,058,138...11,266,639
Ensembl chrNW_004624806:11,058,880...11,266,289 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10385121), (PMID:10411502), (PMID:10500184) MGI PMID:10385121 PMID:10411502 PMID:10500184 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:12421714)
(PMID:15755804) 		MGI PMID:12421714 PMID:15755804 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921 		JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004624859:5,510,442...5,572,122
Ensembl chrNW_004624859:5,510,384...5,572,228 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:16155214) MGI PMID:16155214 NCBI chrNW_004624831:1,882,114...2,012,341
Ensembl chrNW_004624831:1,882,077...2,012,341 		JBrowse link
G Tbc1d32 TBC1 domain family member 32 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624798:9,444,536...9,609,957
Ensembl chrNW_004624798:9,444,919...9,609,134 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:16556915) MGI PMID:16556915 NCBI chrNW_004624747:386,763...395,515
Ensembl chrNW_004624747:388,904...395,098 		JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:16705179) MGI PMID:16705179 NCBI chrNW_004624770:13,506,501...13,515,388
Ensembl chrNW_004624770:13,508,409...13,516,457 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO (PMID:31887266) MGI PMID:31887266 NCBI chrNW_004624786:10,742,842...10,745,381
Ensembl chrNW_004624786:10,741,929...10,745,359 		JBrowse link
G Tmem67 transmembrane protein 67 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004624763:1,219,779...1,281,297
Ensembl chrNW_004624763:1,219,827...1,264,071 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:16291790) MGI PMID:16291790 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:24091014) MGI PMID:24091014 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within 		ISO (PMID:9354794)
(PMID:15384171)
(PMID:16496285) 		BHF-UCL
MGI		 PMID:9354794 PMID:15384171 PMID:16496285 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944405) BHF-UCL PMID:19944405 NCBI chrNW_004624746:3,412,888...3,441,710 JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) BHF-UCL PMID:21719175 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) BHF-UCL PMID:9354794 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944405) BHF-UCL PMID:19944405 NCBI chrNW_004624746:3,412,888...3,441,710 JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) BHF-UCL PMID:9354794 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) BHF-UCL PMID:18371931 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cimap3 ciliary microtubule associated protein 3 acts_upstream_of_or_within ISO (PMID:20643351) MGI PMID:20643351 NCBI chrNW_004624772:7,080,535...7,096,603
Ensembl chrNW_004624772:7,091,047...7,097,970 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (PMID:21209331) CACAO PMID:21209331 NCBI chrNW_004624872:462,778...520,217
Ensembl chrNW_004624872:462,916...520,323 		JBrowse link
G Invs inversin acts_upstream_of_or_within ISO (PMID:9192865) MGI PMID:9192865 NCBI chrNW_004624825:701,335...866,598
Ensembl chrNW_004624825:702,347...866,353 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in ISS CAFA GO_REF:0000024 NCBI chrNW_004624907:397,008...438,091
Ensembl chrNW_004624907:397,008...438,091 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:16,881,189...16,884,245
Ensembl chrNW_004624733:16,881,191...16,884,210 		JBrowse link
G Pitx2 paired like homeodomain 2 involved_in ISO (PMID:17234970) BHF-UCL PMID:17234970 NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 acts_upstream_of_or_within ISO (PMID:33139725) MGI PMID:33139725 NCBI chrNW_004624794:1,344,107...1,380,069
Ensembl chrNW_004624794:1,352,445...1,379,961 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 acts_upstream_of_or_within ISO (PMID:33347437) MGI PMID:33347437 NCBI chrNW_004624778:13,841,227...13,891,946
Ensembl chrNW_004624778:13,839,310...13,891,714 		JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within 		ISO (PMID:23122589)
(PMID:27353389) 		BHF-UCL
MGI		 PMID:23122589 PMID:27353389 NCBI chrNW_004624735:23,269,253...23,355,832
Ensembl chrNW_004624735:23,269,414...23,355,968 		JBrowse link
G Dnah11 dynein axonemal heavy chain 11 acts_upstream_of_or_within ISO (PMID:10549278), (PMID:22102620) MGI PMID:10549278 PMID:22102620 NCBI chrNW_004624739:8,810,127...9,136,044
Ensembl chrNW_004624739:8,811,082...9,135,815 		JBrowse link
G Invs inversin acts_upstream_of_or_within ISO (PMID:10549278) MGI PMID:10549278 NCBI chrNW_004624825:701,335...866,598
Ensembl chrNW_004624825:702,347...866,353 		JBrowse link
G Megf8 multiple EGF like domains 8 NOT|acts_upstream_of_or_within ISO (PMID:18043505) MGI PMID:18043505 NCBI chrNW_004624907:397,008...438,091
Ensembl chrNW_004624907:397,008...438,091 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (PMID:31383820) MGI PMID:31383820 NCBI chrNW_004624828:3,207,935...3,218,795
Ensembl chrNW_004624828:3,208,153...3,218,637 		JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within 		ISO (PMID:27486780) GO_Central
MGI		 PMID:27486780 NCBI chrNW_004624795:1,861,985...1,876,766
Ensembl chrNW_004624795:1,861,991...1,876,737 		JBrowse link
G Ofd1 OFD1 centriole and centriolar satellite protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:376,447...417,066
Ensembl chrNW_004624882:376,556...416,509 		JBrowse link
G Rfx3 regulatory factor X3 involved_in ISO (PMID:15121860) UniProt PMID:15121860 NCBI chrNW_004624736:8,001,078...8,301,856
Ensembl chrNW_004624736:8,003,234...8,161,150 		JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 involved_in ISO (PMID:33139725) GO_Central PMID:33139725 NCBI chrNW_004624794:1,344,107...1,380,069
Ensembl chrNW_004624794:1,352,445...1,379,961 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:11,992,545...12,050,112
Ensembl chrNW_004624786:11,992,553...12,050,220 		JBrowse link
G Ciroz ciliated left-right organizer protein containing ZP-N domains involved_in ISO (PMID:39753129) UniProt PMID:39753129 NCBI chrNW_004624818:1,799,997...1,826,300
Ensembl chrNW_004624818:1,809,875...1,826,350 		JBrowse link
G Dnaaf2 dynein axonemal assembly factor 2 acts_upstream_of_or_within ISO (PMID:31107948)
(PMID:23525783) 		MGI PMID:23525783 PMID:31107948 NCBI chrNW_004624731:19,069,162...19,077,501
Ensembl chrNW_004624731:19,069,203...19,077,505 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein involved_in
acts_upstream_of_or_within 		ISO (PMID:29257953) GO_Central
MGI		 PMID:29257953 NCBI chrNW_004624796:3,961,148...3,980,197
Ensembl chrNW_004624796:3,961,538...3,980,952 		JBrowse link
G Pierce1 piercer of microtubule wall 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:3,095,656...3,112,545
Ensembl chrNW_004624760:3,109,127...3,112,526 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor involved_in ISO (PMID:23603510) BHF-UCL PMID:23603510 NCBI chrNW_004624864:3,308,548...3,311,431
Ensembl chrNW_004624864:3,308,794...3,309,939 		JBrowse link
G Arl13b ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:22554696) MGI PMID:22554696 NCBI chrNW_004624789:6,710,858...6,783,097
Ensembl chrNW_004624789:6,710,681...6,783,667 		JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 involved_in ISO (PMID:32179481) UniProt PMID:32179481 NCBI chrNW_004624734:10,317,932...10,352,300
Ensembl chrNW_004624734:10,316,299...10,352,515 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004624817:2,880,775...3,060,399
Ensembl chrNW_004624817:2,880,976...3,042,004 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (PMID:15750185) MGI PMID:15750185 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within ISO (PMID:23742838) MGI PMID:23742838 NCBI chrNW_004624824:1,299,426...1,352,019
Ensembl chrNW_004624824:1,300,137...1,351,129 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944400), (PMID:19944405) BHF-UCL PMID:19944400 PMID:19944405 NCBI chrNW_004624746:3,412,888...3,441,710 JBrowse link
G Dnaaf19 dynein axonemal assembly factor 19 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chrNW_004624795:404,102...407,025
Ensembl chrNW_004624795:404,068...406,979 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:22841628) BHF-UCL PMID:22841628 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in ISO (PMID:22841628) BHF-UCL PMID:22841628 NCBI chrNW_004624786:9,843,580...9,851,538
Ensembl chrNW_004624786:9,844,157...9,851,301 		JBrowse link
G Eng endoglin involved_in ISO (PMID:10348742), (PMID:19703439) BHF-UCL PMID:10348742 PMID:19703439 NCBI chrNW_004624760:7,703,979...7,735,636
Ensembl chrNW_004624760:7,703,820...7,734,457 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:10411502) MGI PMID:10411502 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO (PMID:17286298) BHF-UCL PMID:17286298 NCBI chrNW_004624817:4,830,164...4,850,565
Ensembl chrNW_004624817:4,820,163...4,851,339 		JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (PMID:15363409) BHF-UCL PMID:15363409 NCBI chrNW_004624735:12,384,728...12,388,234
Ensembl chrNW_004624735:12,386,281...12,387,774 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (PMID:15310850) BHF-UCL PMID:15310850 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
G Gja1 gap junction protein alpha 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (PMID:9500551) MGI PMID:9500551 NCBI chrNW_004624733:34,731,671...34,733,759
Ensembl chrNW_004624733:34,731,671...34,733,759 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (PMID:9171826) MGI PMID:9171826 NCBI chrNW_004624769:5,035,669...5,038,333
Ensembl chrNW_004624769:5,033,932...5,038,343 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO (PMID:14659802) MGI PMID:14659802 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042) MGI PMID:18930042 NCBI chrNW_004624738:9,510,452...9,546,985
Ensembl chrNW_004624738:9,510,512...9,545,933 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (PMID:15930098) MGI PMID:15930098 NCBI chrNW_004624790:10,674,002...10,726,292
Ensembl chrNW_004624790:10,678,911...10,726,265 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO (PMID:17027958) MGI PMID:17027958 NCBI chrNW_004624731:41,321,574...41,390,133
Ensembl chrNW_004624731:41,322,033...41,388,570 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,959,329...5,965,584
Ensembl chrNW_004624823:5,959,448...5,964,769 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chrNW_004624767:19,247,009...19,365,520
Ensembl chrNW_004624767:19,248,430...19,364,793 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10330409) MGI PMID:10330409 NCBI chrNW_004624733:39,354,360...39,406,574
Ensembl chrNW_004624733:39,354,232...39,407,121 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within ISO (PMID:12522123) MGI PMID:12522123 NCBI chrNW_004624831:777,873...780,481
Ensembl chrNW_004624831:778,866...780,365 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chrNW_004624752:25,605,444...25,756,573
Ensembl chrNW_004624752:25,605,302...25,751,893 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:16680724) UniProt PMID:16680724 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:16000382) MGI PMID:16000382 NCBI chrNW_004624770:9,936,202...10,051,018
Ensembl chrNW_004624770:9,941,706...10,051,024 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:16,881,189...16,884,245
Ensembl chrNW_004624733:16,881,191...16,884,210 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:16496285) MGI PMID:16496285 NCBI chrNW_004624754:4,557,407...4,564,580
Ensembl chrNW_004624754:4,557,952...4,564,644 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G Notch2 notch receptor 2 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004624772:15,572,350...15,726,312
Ensembl chrNW_004624772:15,571,998...15,726,426 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO (PMID:17884984) MGI PMID:17884984 NCBI chrNW_004624762:430,981...439,422 JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931), (PMID:20007846) BHF-UCL PMID:18371931 PMID:20007846 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within ISO (PMID:17573777) MGI PMID:17573777 NCBI chrNW_004624741:18,994,689...19,012,381
Ensembl chrNW_004624741:18,995,246...19,012,910 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) BHF-UCL PMID:21719175 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:10557208) MGI PMID:10557208 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in 		ISO (PMID:10411502), (PMID:10500184)
(PMID:11517919) 		MGI
BHF-UCL		 PMID:10411502 PMID:10500184 PMID:11517919 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (PMID:15183723) MGI PMID:15183723 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in 		ISO (PMID:17610846)
(PMID:17610846), (PMID:17655922) 		MGI
BHF-UCL		 PMID:17610846 PMID:17655922 NCBI chrNW_004624735:1,276,382...1,278,584
Ensembl chrNW_004624735:1,276,302...1,279,181 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:15929941) MGI PMID:15929941 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004624859:5,510,442...5,572,122
Ensembl chrNW_004624859:5,510,384...5,572,228 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:16155214) MGI PMID:16155214 NCBI chrNW_004624831:1,882,114...2,012,341
Ensembl chrNW_004624831:1,882,077...2,012,341 		JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in 		ISO (PMID:15901664)
(PMID:15843409)
(PMID:15843407) 		MGI
BHF-UCL		 PMID:15843407 PMID:15843409 PMID:15901664 NCBI chrNW_004624740:25,645,526...25,698,235
Ensembl chrNW_004624740:25,645,895...25,697,132 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO (PMID:17460765)
(PMID:18723448) 		MGI PMID:17460765 PMID:18723448 NCBI chrNW_004624747:18,128,003...18,142,366
Ensembl chrNW_004624747:18,128,028...18,142,451 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (PMID:17050629) BHF-UCL PMID:17050629 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:20178780) MGI PMID:20178780 NCBI chrNW_004624747:23,389,262...23,399,962
Ensembl chrNW_004624747:23,389,262...23,399,955 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:16291790) MGI PMID:16291790 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within 		ISO (PMID:9354794)
(PMID:16496285)
(PMID:15384171) 		BHF-UCL
MGI		 PMID:9354794 PMID:15384171 PMID:16496285 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
left/right axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:22554696) MGI PMID:22554696 NCBI chrNW_004624789:6,710,858...6,783,097
Ensembl chrNW_004624789:6,710,681...6,783,667 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:24,908,711...25,088,246
Ensembl chrNW_004624732:24,908,723...25,088,244 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042)
(PMID:22554696) 		MGI PMID:18930042 PMID:22554696 NCBI chrNW_004624738:9,510,452...9,546,985
Ensembl chrNW_004624738:9,510,512...9,545,933 		JBrowse link
G Ift25 intraflagellar transport 25 acts_upstream_of_or_within ISO (PMID:22595669) MGI PMID:22595669 NCBI chrNW_004624934:533,112...567,896
Ensembl chrNW_004624934:543,847...568,122 		JBrowse link
G Mns1 meiosis specific nuclear structural 1 acts_upstream_of_or_within ISO (PMID:22396656) MGI PMID:22396656 NCBI chrNW_004624781:15,292,047...15,337,466
Ensembl chrNW_004624781:15,291,416...15,328,173 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G Notch2 notch receptor 2 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004624772:15,572,350...15,726,312
Ensembl chrNW_004624772:15,571,998...15,726,426 		JBrowse link
G Pitx2 paired like homeodomain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chrNW_004624740:5,619,253...5,703,032 JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:9636176) MGI PMID:9636176 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:17127413) MGI PMID:17127413 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 involved_in ISO (PMID:15042700) BHF-UCL PMID:15042700 NCBI chrNW_004624871:2,428,757...2,437,447
Ensembl chrNW_004624871:2,429,407...2,437,447 		JBrowse link
regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf207 ring finger protein 207 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:5,176,316...5,183,610
Ensembl chrNW_004624818:5,178,299...5,183,610 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17646
    multicellular organismal process 7727
      pattern specification process 471
        regionalization 433
          left/right pattern formation 134
            determination of left/right symmetry + 126
            embryonic heart tube left/right pattern formation 7
            left/right axis specification 13
Path 2
Term Annotations click to browse term
  biological_process 17646
    developmental process 6435
      anatomical structure development 6017
        multicellular organism development 4847
          pattern specification process 471
            regionalization 433
              left/right pattern formation 134
                determination of left/right symmetry + 126
                embryonic heart tube left/right pattern formation 7
                left/right axis specification 13
paths to the root