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ONTOLOGY REPORT - ANNOTATIONS

Term:left/right pattern formation
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Accession:GO:0060972 term browser browse the term
Definition:The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.


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left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within IMP (PMID:23742838) MGI PMID:23742838 NCBI chr16:3,725,058...3,760,163
Ensembl chr16:3,726,665...3,759,011 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 NOT|acts_upstream_of_or_within IMP (PMID:21203428) MGI PMID:21203428 NCBI chr19:25,649,758...25,656,355
Ensembl chr19:25,649,775...25,656,355 		JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 8:120,301,974...120,325,193
Ensembl chr 8:120,301,974...120,325,193 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within IMP (PMID:20080492) MGI PMID:20080492 NCBI chr19:45,549,018...45,566,728
Ensembl chr19:45,549,054...45,568,202 		JBrowse link
G Foxj1 forkhead box J1 acts_upstream_of_or_within IMP (PMID:10873152) MGI PMID:10873152 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within IMP (PMID:17027958) MGI PMID:17027958 NCBI chr16:49,519,657...49,585,489
Ensembl chr16:49,519,596...49,585,489 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within
involved_in 		IMP
ISO 		(PMID:32203821), (PMID:32966817)
(PMID:24052814) 		MGI
GO_Central
UniProt		 PMID:24052814 PMID:32203821 PMID:32966817 GO_REF:0000119 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within IMP (PMID:34486668) MGI PMID:34486668 NCBI chr 7:120,276,814...120,334,079
Ensembl chr 7:120,276,841...120,334,077 		JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within IMP (PMID:20080492) MGI PMID:20080492 NCBI chr 1:164,135,091...164,264,870
Ensembl chr 1:164,131,690...164,265,294 		JBrowse link
G Pkd1l1 polycystic kidney disease 1 like 1 acts_upstream_of_or_within IMP (PMID:20080492) MGI PMID:20080492 NCBI chr11:8,782,025...8,924,365
Ensembl chr11:8,776,708...8,938,709 		JBrowse link
G Snai1 snail family zinc finger 1 acts_upstream_of_or_within IMP (PMID:16801545) MGI PMID:16801545 NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IMP (PMID:23303524)
(PMID:23184148) 		MGI PMID:23184148 PMID:23303524 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1l1 polycystic kidney disease 1 like 1 involved_in IMP (PMID:21307093) BHF-UCL PMID:21307093 NCBI chr11:8,782,025...8,924,365
Ensembl chr11:8,776,708...8,938,709 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in IMP (PMID:21307093) BHF-UCL PMID:21307093 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within IMP (PMID:31887266) MGI PMID:31887266 NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119 		JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:102,772,050...102,776,042
Ensembl chr11:102,772,030...102,776,042 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:120,301,974...120,325,193
Ensembl chr 8:120,301,974...120,325,193 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within ISO
IMP 		(PMID:19218456)
(PMID:18043505) 		MGI PMID:18043505 PMID:19218456 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:82,799,988...82,803,388
Ensembl chr 4:82,799,988...82,803,385 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:15750185) MGI PMID:15750185 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Dand5 DAN domain family member 5, BMP antagonist involved_in IMP
IBA 		(PMID:15466485) BHF-UCL
GO_Central		 PMID:15466485 GO_REF:0000033 NCBI chr 8:85,542,034...85,558,894
Ensembl chr 8:85,542,033...85,559,038 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IMP (PMID:11076684) MGI PMID:11076684 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:9576835) MGI PMID:9576835 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within
involved_in 		IMP
ISO 		(PMID:18043505)
(PMID:19218456) 		MGI
GO_Central		 PMID:18043505 PMID:19218456 GO_REF:0000119 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in ISS
IMP 		(PMID:26437028) UniProt PMID:26437028 GO_REF:0000024 NCBI chr 7:133,275,999...133,281,790
Ensembl chr 7:133,275,999...133,281,790 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IMP (PMID:25192045) MGI PMID:25192045 NCBI chr 9:21,901,167...21,914,268
Ensembl chr 9:21,901,167...21,913,930 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in TAS (PMID:15466160) BHF-UCL PMID:15466160 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G T brachyury, T-box transcription factor T acts_upstream_of_or_within IMP (PMID:10349618) MGI PMID:10349618 NCBI chr17:8,653,255...8,661,328
Ensembl chr17:8,653,255...8,661,328 		JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephronophthisis 3 (adolescent) involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP (PMID:15475956) BHF-UCL PMID:15475956 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Dand5 DAN domain family member 5, BMP antagonist involved_in IMP (PMID:15466485) BHF-UCL PMID:15466485 NCBI chr 8:85,542,034...85,558,894
Ensembl chr 8:85,542,033...85,559,038 		JBrowse link
G Nodal nodal growth differentiation factor involved_in IMP (PMID:17507406) BHF-UCL PMID:17507406 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Shh sonic hedgehog involved_in IMP (PMID:11517919) BHF-UCL PMID:11517919 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad2 SMAD family member 2 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (PMID:11517919) BHF-UCL PMID:11517919 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Zic2 zinc finger protein of the cerebellum 2 acts_upstream_of_or_within IMP (PMID:24585447) MGI PMID:24585447 NCBI chr14:122,712,796...122,717,740
Ensembl chr14:122,712,847...122,717,264 		JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within IMP (PMID:18414654) MGI PMID:18414654 NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IMP (PMID:11959836) UniProt PMID:11959836 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 acts_upstream_of_or_within IMP (PMID:15531373) MGI PMID:15531373 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Acvr1c activin A receptor, type IC NOT|acts_upstream_of_or_within IMP (PMID:15485907) MGI PMID:15485907 NCBI chr 2:58,157,465...58,247,909
Ensembl chr 2:58,157,465...58,247,907 		JBrowse link
G Acvr2a activin receptor IIA acts_upstream_of_or_within IGI (PMID:16991118) MGI PMID:16991118 NCBI chr 2:48,704,121...48,793,276
Ensembl chr 2:48,704,121...48,793,281 		JBrowse link
G Acvr2b activin receptor IIB acts_upstream_of_or_within IGI
IMP 		(PMID:16991118)
(PMID:9242489) 		MGI PMID:9242489 PMID:16991118 NCBI chr 9:119,231,081...119,271,214
Ensembl chr 9:119,231,184...119,264,061 		JBrowse link
G Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase acts_upstream_of_or_within IMP (PMID:15755804) MGI PMID:15755804 NCBI chr 3:54,642,960...54,657,216
Ensembl chr 3:54,642,960...54,658,739 		JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 4:47,015,365...47,057,339
Ensembl chr 4:47,015,669...47,057,427 		JBrowse link
G Ap1b1 adaptor protein complex AP-1, beta 1 subunit acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr11:4,897,320...4,992,731
Ensembl chr11:4,936,824...4,992,791 		JBrowse link
G Arl13b ADP-ribosylation factor-like 13B acts_upstream_of_or_within IMP (PMID:15755804) MGI PMID:15755804 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Bicc1 BicC family RNA binding protein 1 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr10:70,758,660...70,995,581
Ensembl chr10:70,758,662...70,995,530 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within IMP (PMID:24947469)
(PMID:25807483) 		MGI PMID:24947469 PMID:25807483 NCBI chr 5:43,819,715...43,898,317
Ensembl chr 5:43,819,688...43,898,314 		JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,772,050...102,776,042
Ensembl chr11:102,772,030...102,776,042 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within IMP (PMID:25807483)
(PMID:28289722) 		MGI PMID:25807483 PMID:28289722 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 acts_upstream_of_or_within IGI (PMID:28182636) MGI PMID:28182636 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 acts_upstream_of_or_within
involved_in 		ISS
ISO 		UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr18:74,416,171...74,493,055
Ensembl chr18:74,416,161...74,493,057 		JBrowse link
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within
involved_in 		IMP
IBA 		(PMID:10521397)
(PMID:25807483) 		MGI
GO_Central		 PMID:10521397 PMID:25807483 GO_REF:0000033 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Ciroz ciliated left-right organizer protein containing ZP-N domains acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 4:148,727,774...148,761,562
Ensembl chr 4:148,727,774...148,760,753 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP (PMID:15750185) UniProt PMID:15750185 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cripto cripto, EGF-CFC family member involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:110,768,676...110,775,226
Ensembl chr 9:110,768,671...110,775,226 		JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 acts_upstream_of_or_within IMP (PMID:24091014) MGI PMID:24091014 NCBI chr17:49,763,050...49,871,517
Ensembl chr17:49,763,050...49,871,371 		JBrowse link
G Dand5 DAN domain family member 5, BMP antagonist acts_upstream_of_or_within
involved_in 		IGI
ISS
IMP 		(PMID:15466485) MGI
BHF-UCL		 PMID:15466485 GO_REF:0000024 NCBI chr 8:85,542,034...85,558,894
Ensembl chr 8:85,542,033...85,559,038 		JBrowse link
G Daw1 dynein assembly factor with WDR repeat domains 1 acts_upstream_of_or_within IMP (PMID:25807483)
(PMID:28289722) 		MGI PMID:25807483 PMID:28289722 NCBI chr 1:83,136,610...83,188,298
Ensembl chr 1:83,137,473...83,188,295 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within IMP (PMID:15755804)
(PMID:12421714) 		MGI PMID:12421714 PMID:15755804 NCBI chr 1:182,867,828...183,010,257
Ensembl chr 1:182,867,830...183,003,086 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within IMP (PMID:12730124) MGI PMID:12730124 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dnaaf3 dynein, axonemal assembly factor 3 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 7:4,525,932...4,535,487
Ensembl chr 7:4,525,932...4,535,452 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 acts_upstream_of_or_within
involved_in 		IMP
IBA
ISO 		(PMID:25807483)
(PMID:23872636) 		MGI
GO_Central
UniProt		 PMID:23872636 PMID:25807483 GO_REF:0000033 GO_REF:0000119 NCBI chr 9:72,863,574...72,880,971
Ensembl chr 9:72,866,067...72,880,346 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within IMP
ISO 		(PMID:9353118)
(PMID:10556073)
(PMID:27340223)
(PMID:25807483) 		MGI
GO_Central		 PMID:9353118 PMID:10556073 PMID:25807483 PMID:27340223 GO_REF:0000119 MGI:48750 NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778 		JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 acts_upstream_of_or_within IMP
ISO 		(PMID:11912187)
(PMID:25807483)
(PMID:28289722) 		MGI
GO_Central		 PMID:11912187 PMID:25807483 PMID:28289722 GO_REF:0000119 NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198 		JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 acts_upstream_of_or_within IMP
ISO 		(PMID:25807483) MGI
GO_Central		 PMID:25807483 GO_REF:0000119 NCBI chr 4:41,569,731...41,638,158
Ensembl chr 4:41,569,775...41,638,158 		JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:114,614,634...114,648,715
Ensembl chr11:114,618,234...114,648,715 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr19:45,549,018...45,566,728
Ensembl chr19:45,549,054...45,568,202 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 5:30,486,328...30,524,039
Ensembl chr 5:30,486,386...30,524,039 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IMP (PMID:16229832), (PMID:25807483)
(PMID:15755804), (PMID:16061793) 		MGI PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 NCBI chr 9:6,928,550...7,177,619
Ensembl chr 9:6,928,503...7,184,446 		JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 acts_upstream_of_or_within IMP (PMID:15371312) MGI PMID:15371312 NCBI chr17:84,933,903...84,962,996
Ensembl chr17:84,933,924...84,963,016 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15329346) MGI PMID:15329346 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:10411502) MGI PMID:10411502 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP (PMID:11493558) MGI PMID:11493558 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within IMP (PMID:12642485) MGI PMID:12642485 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Foxj1 forkhead box J1 acts_upstream_of_or_within
involved_in 		IMP
ISS
ISO 		(PMID:25807483) MGI
UniProt
GO_Central		 PMID:25807483 GO_REF:0000024 GO_REF:0000119 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225 		JBrowse link
G Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:25,427,732...25,470,916
Ensembl chr 5:25,426,902...25,470,916 		JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within IMP (PMID:27472056) MGI PMID:27472056 NCBI chr 8:124,245,630...124,263,394
Ensembl chr 8:124,245,573...124,263,389 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:15755804) MGI PMID:15755804 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within IMP (PMID:15930098) MGI PMID:15930098 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Ift74 intraflagellar transport 74 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 4:94,491,503...94,581,470
Ensembl chr 4:94,502,728...94,581,466 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:15755804)
(PMID:10804177) 		MGI PMID:10804177 PMID:15755804 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within IMP (PMID:15755804)
(PMID:10220415) 		MGI PMID:10220415 PMID:15755804 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Lefty1 left right determination factor 1 involved_in IDA (PMID:9708732) BHF-UCL PMID:9708732 NCBI chr 1:180,762,587...180,765,966
Ensembl chr 1:180,762,587...180,765,965 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (PMID:19776033)
(PMID:21045211) 		MGI PMID:19776033 PMID:21045211 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629 		JBrowse link
G Mmp21 matrix metallopeptidase 21 acts_upstream_of_or_within
involved_in 		IMP
ISS
ISO 		(PMID:25807483)
(PMID:26437028) 		MGI
UniProt
GO_Central		 PMID:25807483 PMID:26437028 GO_REF:0000024 GO_REF:0000119 NCBI chr 7:133,275,999...133,281,790
Ensembl chr 7:133,275,999...133,281,790 		JBrowse link
G Nat8f5 N-acetyltransferase 8 (GCN5-related) family member 5 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 6:85,794,200...85,797,954
Ensembl chr 6:85,794,200...85,797,954 		JBrowse link
G Nek8 NIMA (never in mitosis gene a)-related expressed kinase 8 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr11:78,056,932...78,067,501
Ensembl chr11:78,056,932...78,067,501 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within IMP (PMID:15329346) MGI PMID:15329346 NCBI chr 5:41,918,826...41,921,563
Ensembl chr 5:41,918,826...41,921,844 		JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 1:164,135,091...164,264,870
Ensembl chr 1:164,131,690...164,265,294 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in 		IMP
TAS
IGI
IDA 		(PMID:11311163)
(PMID:9354794)
(PMID:15466485)
(PMID:16496285)
(PMID:12231623)
(PMID:12642485), (PMID:12654299)
(PMID:28182636) 		MGI
BHF-UCL		 PMID:9354794 PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 More... NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (PMID:7789282)
(PMID:12730124) 		MGI PMID:7789282 PMID:12730124 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 acts_upstream_of_or_within IMP (PMID:12730124) MGI PMID:12730124 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within IMP (PMID:20350929)
(PMID:17884984), (PMID:22357932) 		MGI PMID:17884984 PMID:20350929 PMID:22357932 NCBI chr 6:85,400,851...85,405,859
Ensembl chr 6:85,400,868...85,405,859 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in IMP
IBA
ISO 		(PMID:18371931) BHF-UCL
GO_Central		 PMID:18371931 GO_REF:0000033 GO_REF:0000119 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 acts_upstream_of_or_within IMP
ISO 		(PMID:25807483)
(PMID:23849778) 		MGI
GO_Central		 PMID:23849778 PMID:25807483 GO_REF:0000119 NCBI chr18:7,088,233...7,298,272
Ensembl chr18:7,088,209...7,297,936 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IMP
ISO 		(PMID:31383820)
(PMID:25807483) 		MGI
GO_Central		 PMID:25807483 PMID:31383820 GO_REF:0000119 NCBI chr 9:21,901,167...21,914,268
Ensembl chr 9:21,901,167...21,913,930 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 acts_upstream_of_or_within IGI (PMID:10809672) MGI PMID:10809672 NCBI chr 7:65,511,884...65,700,134
Ensembl chr 7:65,511,482...65,700,134 		JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in 		IMP (PMID:27305836)
(PMID:34715025) 		MGI
UniProt		 PMID:27305836 PMID:34715025 NCBI chr 2:28,352,013...28,356,336
Ensembl chr 2:28,352,013...28,356,344 		JBrowse link
G Pierce2 piercer of microtubule wall 2 involved_in IMP (PMID:34715025) UniProt PMID:34715025 NCBI chr 9:72,886,999...72,892,658
Ensembl chr 9:72,886,964...72,892,674 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within
involved_in 		IMP (PMID:10572050)
(PMID:9708732)
(PMID:11493526), (PMID:24091014)
(PMID:10499586)
(PMID:12397115)
(PMID:10498698) 		MGI
BHF-UCL		 PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 More... NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Pkd1l1 polycystic kidney disease 1 like 1 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr11:8,782,025...8,924,365
Ensembl chr11:8,776,708...8,938,709 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within IMP (PMID:12062060) MGI PMID:12062060 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Pskh1 protein serine kinase H1 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 8:106,627,106...106,658,434
Ensembl chr 8:106,627,073...106,658,410 		JBrowse link
G Rfx3 regulatory factor X, 3 (influences HLA class II expression) acts_upstream_of_or_within IMP (PMID:15121860) MGI PMID:15121860 NCBI chr19:27,739,121...27,995,287
Ensembl chr19:27,739,121...27,988,566 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within IMP (PMID:17531978) MGI PMID:17531978 NCBI chr 9:86,897,590...86,902,494
Ensembl chr 9:86,897,590...86,901,970 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17553904) MGI PMID:17553904 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rttn rotatin acts_upstream_of_or_within IMP (PMID:11900971) MGI PMID:11900971 NCBI chr18:88,989,860...89,149,140
Ensembl chr18:88,989,914...89,149,140 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:10385121), (PMID:10411502), (PMID:10500184) MGI PMID:10385121 PMID:10411502 PMID:10500184 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:12421714)
(PMID:15755804) 		MGI PMID:12421714 PMID:15755804 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Stil Scl/Tal1 interrupting locus acts_upstream_of_or_within IMP (PMID:10385121) MGI PMID:10385121 NCBI chr 4:114,857,287...114,900,404
Ensembl chr 4:114,857,356...114,900,393 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IMP (PMID:16155214) MGI PMID:16155214 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr10:55,890,389...56,106,495
Ensembl chr10:55,890,389...56,104,785 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:16556915) MGI PMID:16556915 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within IMP (PMID:16705179) MGI PMID:16705179 NCBI chr17:71,151,200...71,160,527
Ensembl chr17:71,151,200...71,160,541 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within IMP (PMID:31887266) MGI PMID:31887266 NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119 		JBrowse link
G Tmem67 transmembrane protein 67 acts_upstream_of_or_within IMP (PMID:25807483) MGI PMID:25807483 NCBI chr 4:12,039,355...12,090,020
Ensembl chr 4:12,039,363...12,090,020 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IMP (PMID:16291790) MGI PMID:16291790 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:24091014) MGI PMID:24091014 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 acts_upstream_of_or_within
involved_in 		IGI
ISO
IMP 		(PMID:16496285)
(PMID:15384171) 		MGI
GO_Central		 PMID:15384171 PMID:16496285 GO_REF:0000119 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:120,301,974...120,325,193
Ensembl chr 8:120,301,974...120,325,193 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:120,301,974...120,325,193
Ensembl chr 8:120,301,974...120,325,193 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephronophthisis 3 (adolescent) involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cimap3 ciliary microtubule associated protein 3 acts_upstream_of_or_within IMP (PMID:20643351) MGI PMID:20643351 NCBI chr 3:105,904,273...105,921,962
Ensembl chr 3:105,904,273...105,921,962 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP (PMID:15475956) BHF-UCL PMID:15475956 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (PMID:21209331) CACAO PMID:21209331 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Invs inversin acts_upstream_of_or_within IMP (PMID:9192865) MGI PMID:9192865 NCBI chr 4:48,279,707...48,431,956
Ensembl chr 4:48,279,760...48,431,954 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (PMID:24052814) UniProt PMID:24052814 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:9192865) MGI PMID:9192865 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in IMP (PMID:17234970) BHF-UCL PMID:17234970 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISS
IBA
ISO 		UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO
IBA
IMP 		(PMID:21131974) GO_Central
UniProt		 PMID:21131974 GO_REF:0000033 GO_REF:0000119 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 acts_upstream_of_or_within IMP (PMID:33139725) MGI PMID:33139725 NCBI chr 1:172,348,697...172,373,437
Ensembl chr 1:172,348,368...172,373,437 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 acts_upstream_of_or_within
involved_in 		IMP
ISS 		(PMID:33347437) MGI
UniProt		 PMID:33347437 GO_REF:0000024 NCBI chr18:74,416,171...74,493,055
Ensembl chr18:74,416,161...74,493,057 		JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 acts_upstream_of_or_within
involved_in 		IMP
ISO 		(PMID:27353389) MGI
GO_Central		 PMID:27353389 GO_REF:0000119 NCBI chr15:66,251,707...66,372,769
Ensembl chr15:66,251,707...66,372,759 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within IMP (PMID:10549278), (PMID:22102620) MGI PMID:10549278 PMID:22102620 NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778 		JBrowse link
G Invs inversin acts_upstream_of_or_within IMP (PMID:10549278) MGI PMID:10549278 NCBI chr 4:48,279,707...48,431,956
Ensembl chr 4:48,279,760...48,431,954 		JBrowse link
G Megf8 multiple EGF-like-domains 8 NOT|acts_upstream_of_or_within IMP (PMID:18043505) MGI PMID:18043505 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IMP (PMID:31383820) MGI PMID:31383820 NCBI chr 9:21,901,167...21,914,268
Ensembl chr 9:21,901,167...21,913,930 		JBrowse link
G Odad4 outer dynein arm complex subunit 4 acts_upstream_of_or_within
involved_in 		IMP
ISO 		(PMID:27486780) MGI
GO_Central		 PMID:27486780 NCBI chr11:100,436,434...100,463,392
Ensembl chr11:100,436,433...100,463,394 		JBrowse link
G Ofd1 OFD1, centriole and centriolar satellite protein involved_in IMP (PMID:16311594) UniProt PMID:16311594 NCBI chr  X:165,171,503...165,223,704
Ensembl chr  X:165,173,029...165,223,700 		JBrowse link
G Rfx3 regulatory factor X, 3 (influences HLA class II expression) involved_in IMP (PMID:15121860) UniProt PMID:15121860 NCBI chr19:27,739,121...27,995,287
Ensembl chr19:27,739,121...27,988,566 		JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within IMP (PMID:29317443) MGI PMID:29317443 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:172,348,697...172,373,437
Ensembl chr 1:172,348,368...172,373,437 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,815,632...67,856,494
Ensembl chr11:67,815,632...67,856,477 		JBrowse link
G Cirop ciliated left-right organizer metallopeptidase involved_in ISS UniProt GO_REF:0000024 NCBI chr14:54,928,502...54,936,602
Ensembl chr14:54,930,055...54,936,290 		JBrowse link
G Ciroz ciliated left-right organizer protein containing ZP-N domains involved_in ISO (PMID:39753129) UniProt PMID:39753129 NCBI chr 4:148,727,774...148,761,562
Ensembl chr 4:148,727,774...148,760,753 		JBrowse link
G Dnaaf2 dynein, axonemal assembly factor 2 acts_upstream_of_or_within IMP (PMID:23525783)
(PMID:31107948) 		MGI PMID:23525783 PMID:31107948 NCBI chr12:69,235,861...69,245,203
Ensembl chr12:69,235,861...69,245,203 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein acts_upstream_of_or_within
involved_in 		IMP
ISO 		(PMID:29257953) MGI
GO_Central		 PMID:29257953 NCBI chr 2:21,185,542...21,210,176
Ensembl chr 2:21,185,542...21,210,176 		JBrowse link
G Pierce1 piercer of microtubule wall 1 involved_in IMP (PMID:27305836) UniProt PMID:27305836 NCBI chr 2:28,352,013...28,356,336
Ensembl chr 2:28,352,013...28,356,344 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 involved_in TAS (PMID:20299672) DFLAT PMID:20299672 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Aplnr apelin receptor involved_in IMP (PMID:23603510) BHF-UCL PMID:23603510 NCBI chr 2:84,966,704...84,970,267
Ensembl chr 2:84,966,569...84,970,267 		JBrowse link
G Arl13b ADP-ribosylation factor-like 13B acts_upstream_of_or_within IMP (PMID:22554696) MGI PMID:22554696 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in IMP (PMID:32179481) UniProt PMID:32179481 NCBI chr12:103,287,401...103,322,260
Ensembl chr12:103,287,401...103,322,260 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (PMID:19004860) MGI PMID:19004860 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:102,772,050...102,776,042
Ensembl chr11:102,772,030...102,776,042 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO
IBA 		GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within IMP (PMID:10521397) MGI PMID:10521397 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:15750185) MGI PMID:15750185 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within IMP (PMID:23742838) MGI PMID:23742838 NCBI chr16:3,725,058...3,760,163
Ensembl chr16:3,726,665...3,759,011 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:120,301,974...120,325,193
Ensembl chr 8:120,301,974...120,325,193 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IGI (PMID:22841628) BHF-UCL PMID:22841628 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in IGI (PMID:22841628) BHF-UCL PMID:22841628 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Eng endoglin involved_in IMP (PMID:10348742), (PMID:19703439) BHF-UCL PMID:10348742 PMID:19703439 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:10411502) MGI PMID:10411502 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Folr1 folate receptor alpha involved_in IMP (PMID:17286298) BHF-UCL PMID:17286298 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
G Foxh1 forkhead box H1 involved_in IMP (PMID:15363409) BHF-UCL PMID:15363409 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Foxn4 forkhead box N4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:114,392,225...114,412,486
Ensembl chr 5:114,392,225...114,411,868 		JBrowse link
G Gata4 GATA binding protein 4 involved_in IMP (PMID:15310850) BHF-UCL PMID:15310850 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (PMID:9486664) MGI PMID:9486664 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IMP (PMID:9500551) MGI PMID:9500551 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:9171826) MGI PMID:9171826 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP (PMID:14659802) MGI PMID:14659802 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:18930042) MGI PMID:18930042 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within IMP (PMID:15930098) MGI PMID:15930098 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within IMP (PMID:17027958) MGI PMID:17027958 NCBI chr16:49,519,657...49,585,489
Ensembl chr16:49,519,596...49,585,489 		JBrowse link
G Ihh Indian hedgehog involved_in IMP (PMID:11517919) BHF-UCL PMID:11517919 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Kdm2a lysine (K)-specific demethylase 2A acts_upstream_of_or_within IMP (PMID:25463925) MGI PMID:25463925 NCBI chr19:4,366,172...4,448,749
Ensembl chr19:4,364,447...4,448,313 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within IMP (PMID:10330409) MGI PMID:10330409 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within IMP (PMID:12522123) MGI PMID:12522123 NCBI chr19:45,221,123...45,225,280
Ensembl chr19:45,221,123...45,224,251 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in IMP (PMID:16680724) UniProt PMID:16680724 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IMP (PMID:10393122) BHF-UCL PMID:10393122 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within IMP (PMID:16000382) MGI PMID:16000382 NCBI chr18:10,725,523...10,822,969
Ensembl chr18:10,725,548...10,818,704 		JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:111,825,032...112,012,311
Ensembl chr 7:111,825,063...112,012,313 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:16510504)
(PMID:7628699), (PMID:9192865) 		MGI PMID:7628699 PMID:9192865 PMID:16510504 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IGI (PMID:16496285) MGI PMID:16496285 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Notch1 notch 1 involved_in IGI (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 involved_in IGI (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within IMP (PMID:17884984) MGI PMID:17884984 NCBI chr 6:85,400,851...85,405,859
Ensembl chr 6:85,400,868...85,405,859 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within IMP (PMID:17573777) MGI PMID:17573777 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:10557208) MGI PMID:10557208 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in TAS (PMID:15466160) BHF-UCL PMID:15466160 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Setdb2 SET domain, bifurcated 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:59,639,458...59,678,329
Ensembl chr14:59,639,458...59,678,333 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within
involved_in 		IMP (PMID:10411502), (PMID:10500184)
(PMID:11517919) 		MGI
BHF-UCL		 PMID:10411502 PMID:10500184 PMID:11517919 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within IGI (PMID:15183723) MGI PMID:15183723 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (PMID:11517919) BHF-UCL PMID:11517919 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 acts_upstream_of_or_within
involved_in 		IMP (PMID:17610846)
(PMID:17610846), (PMID:17655922) 		MGI
BHF-UCL		 PMID:17610846 PMID:17655922 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:15929941) MGI PMID:15929941 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Stil Scl/Tal1 interrupting locus acts_upstream_of_or_within IMP (PMID:10385121) MGI PMID:10385121 NCBI chr 4:114,857,287...114,900,404
Ensembl chr 4:114,857,356...114,900,393 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IMP (PMID:16155214) MGI PMID:16155214 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
G Tbx2 T-box 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx20 T-box 20 acts_upstream_of_or_within
involved_in 		IMP
IBA 		(PMID:15843407)
(PMID:15843409)
(PMID:15901664) 		MGI
GO_Central
BHF-UCL		 PMID:15843407 PMID:15843409 PMID:15901664 GO_REF:0000033 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:18723448)
(PMID:17460765) 		MGI PMID:17460765 PMID:18723448 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (PMID:17050629) BHF-UCL PMID:17050629 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within IMP (PMID:20178780) MGI PMID:20178780 NCBI chr 5:124,678,835...124,688,566
Ensembl chr 5:124,678,758...124,688,569 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 involved_in IMP (PMID:11440971) UniProt PMID:11440971 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IMP (PMID:16291790) MGI PMID:16291790 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 acts_upstream_of_or_within
involved_in 		IGI
ISO
IMP 		(PMID:16496285)
(PMID:15384171) 		MGI
GO_Central		 PMID:15384171 PMID:16496285 GO_REF:0000119 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
left/right axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor-like 13B acts_upstream_of_or_within IMP (PMID:22554696) MGI PMID:22554696 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP (PMID:15475956) BHF-UCL PMID:15475956 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within IMP (PMID:20678497) MGI PMID:20678497 NCBI chr 1:119,472,762...119,576,826
Ensembl chr 1:119,472,767...119,576,730 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:18930042)
(PMID:22554696) 		MGI PMID:18930042 PMID:22554696 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ift25 intraflagellar transport 25 acts_upstream_of_or_within IMP (PMID:22595669) MGI PMID:22595669 NCBI chr 4:107,110,889...107,137,135
Ensembl chr 4:107,110,790...107,137,135 		JBrowse link
G Mns1 meiosis-specific nuclear structural protein 1 acts_upstream_of_or_within IMP (PMID:22396656) MGI PMID:22396656 NCBI chr 9:72,345,276...72,366,036
Ensembl chr 9:72,345,293...72,369,307 		JBrowse link
G Notch1 notch 1 involved_in IGI (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 involved_in IGI (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in IMP (PMID:15475956) BHF-UCL PMID:15475956 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Pkd1l1 polycystic kidney disease 1 like 1 involved_in IMP (PMID:21307093) BHF-UCL PMID:21307093 NCBI chr11:8,782,025...8,924,365
Ensembl chr11:8,776,708...8,938,709 		JBrowse link
G Setdb2 SET domain, bifurcated 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:59,639,458...59,678,329
Ensembl chr14:59,639,458...59,678,333 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:9636176) MGI PMID:9636176 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IMP (PMID:17127413) MGI PMID:17127413 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box 2 involved_in IMP (PMID:15042700) BHF-UCL PMID:15042700 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf207 ring finger protein 207 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:152,391,475...152,403,686
Ensembl chr 4:152,391,476...152,403,450 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28626
    multicellular organismal process 9119
      pattern specification process 508
        regionalization 460
          left/right pattern formation 147
            determination of left/right symmetry + 139
            embryonic heart tube left/right pattern formation 7
            left/right axis specification 14
Path 2
Term Annotations click to browse term
  biological_process 28626
    developmental process 7547
      anatomical structure development 7011
        multicellular organism development 5580
          pattern specification process 508
            regionalization 460
              left/right pattern formation 147
                determination of left/right symmetry + 139
                embryonic heart tube left/right pattern formation 7
                left/right axis specification 14
paths to the root