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ONTOLOGY REPORT - ANNOTATIONS

Term:left/right pattern formation
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Accession:GO:0060972 term browser browse the term
Definition:The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.

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left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046 		JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within ISO (PMID:23742838) MGI PMID:23742838 NCBI chr 5:3,196,257...3,236,912 JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 5:3,196,267...3,230,902 JBrowse link
G DMRT2 doublesex and mab-3 related transcription factor 2 NOT|acts_upstream_of_or_within ISO (PMID:21203428) MGI PMID:21203428 NCBI chr12:78,461,974...78,472,868
Ensembl chr12:78,461,987...78,468,684 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:94,612,383...94,633,729
Ensembl chr 9:94,612,460...94,633,537 		JBrowse link
G FOXJ1 forkhead box J1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:45,536,973...45,544,331
Ensembl chr16:45,539,510...45,544,299 		JBrowse link
G IFT57 intraflagellar transport 57 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:72,560,168...72,629,066
Ensembl chr22:72,560,221...72,632,158 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:32203821), (PMID:32966817) Ensembl
MGI		 PMID:32203821 PMID:32966817 GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G MOSMO modulator of smoothened acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:19,679,299...19,760,484
Ensembl chr 5:19,679,317...19,758,166 		JBrowse link
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:59,685,437...59,899,458
Ensembl chr25:59,685,531...59,898,677 		JBrowse link
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:20080492) MGI PMID:20080492 NCBI chr21:10,850,618...11,030,099 JBrowse link
G SNAI1 snail family transcriptional repressor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:13,988,059...13,993,780
Ensembl chr 2:13,988,024...13,993,746 		JBrowse link
G ZIC3 Zic family member 3 involved_in ISO (PMID:23184148)
(PMID:23303524) 		MGI PMID:23184148 PMID:23303524 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chr21:10,850,618...11,030,099 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chr 7:36,369,226...36,445,713
Ensembl chr 7:36,369,524...36,443,612 		JBrowse link
G TMEM107 transmembrane protein 107 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:7,554,771...7,558,413
Ensembl chr16:7,555,009...7,557,085 		JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:72,004,705...72,063,438 JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DNAAF19 dynein axonemal assembly factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,648,881...11,652,815
Ensembl chr 6:11,649,331...11,652,567 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:56,928,164...56,935,675
Ensembl chr23:56,928,676...56,931,785 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:119,635,697...119,639,415
Ensembl chr 7:119,634,741...119,638,546 		JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G MMP21 matrix metallopeptidase 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:118,387,926...118,400,048
Ensembl chr 9:118,389,666...118,398,807 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:10,349,063...10,360,292
Ensembl chr 6:10,349,069...10,360,250 		JBrowse link
G TBXT T-box transcription factor T acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:93,854,086...93,864,910
Ensembl chr13:93,855,534...93,864,507 		JBrowse link
G TBXT T-box transcription factor T acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr13:93,855,534...93,864,507 JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,648,881...11,652,815
Ensembl chr 6:11,649,331...11,652,567 		JBrowse link
G NODAL nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,852,567...60,863,225
Ensembl chr 9:60,853,763...60,862,839 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SMAD2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:33,017,138...33,105,320
Ensembl chr18:33,017,492...33,104,606 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:24585447) MGI PMID:24585447 NCBI chr 3:78,631,556...78,637,422
Ensembl chr 3:78,631,530...78,636,548 		JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAH11 dynein axonemal heavy chain 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:36,350,606...36,722,018
Ensembl chr21:36,350,707...36,720,511 		JBrowse link
G ZIC3 Zic family member 3 involved_in ISO (PMID:11959836) UniProt PMID:11959836 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:43,139,396...43,281,024
Ensembl chr10:43,139,528...43,281,177 		JBrowse link
G ACVR1C activin A receptor type 1C NOT|acts_upstream_of_or_within ISO (PMID:15485907) MGI PMID:15485907 NCBI chr10:42,935,085...43,030,581
Ensembl chr10:42,942,284...42,994,488 		JBrowse link
G ACVR2A activin A receptor type 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:33,223,902...33,311,257
Ensembl chr10:33,224,099...33,307,720 		JBrowse link
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:9242489)
(PMID:16991118) 		MGI PMID:9242489 PMID:16991118 NCBI chr15:923,222...962,438 JBrowse link
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr15:933,070...939,419 JBrowse link
G ALG5 ALG5 dolichyl-phosphate beta-glucosyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:15,468,291...15,519,137
Ensembl chr 3:15,468,208...15,518,941 		JBrowse link
G ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:40,631,235...40,695,920
Ensembl chr12:40,631,467...40,697,393 		JBrowse link
G AP1B1 adaptor related protein complex 1 subunit beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:12,195,981...12,259,289
Ensembl chr19:12,195,755...12,259,272 		JBrowse link
G ARL13B ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chr22:86,648,924...86,722,006
Ensembl chr22:86,651,076...86,721,948 		JBrowse link
G BICC1 BicC family RNA binding protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:72,469,498...72,789,106
Ensembl chr 9:72,469,323...72,789,167 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:34,625,701...34,761,873
Ensembl chr27:34,625,105...34,761,745 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:28182636) MGI PMID:28182636 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC40 coiled-coil domain containing 40 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr16:72,004,705...72,063,438 JBrowse link
G CEP290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr11:83,420,911...83,515,466
Ensembl chr11:83,412,379...83,514,596 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:30,690,451...30,731,711
Ensembl chr18:30,691,006...30,725,354 		JBrowse link
G CIROZ ciliated left-right organizer protein containing ZP-N domains acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr20:120,776,751...120,836,716
Ensembl chr20:120,804,759...120,835,451 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046 		JBrowse link
G DAAM2 dishevelled associated activator of morphogenesis 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:32,252,891...32,367,575
Ensembl chr17:32,255,661...32,301,176 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:11,648,881...11,652,815
Ensembl chr 6:11,649,331...11,652,567 		JBrowse link
G DAW1 dynein assembly factor with WD repeats 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:113,890,514...113,948,610
Ensembl chr10:113,890,976...113,948,761 		JBrowse link
G DISP1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:12421714) 		MGI PMID:12421714 PMID:15755804 NCBI chr25:6,559,866...6,759,092
Ensembl chr25:6,559,862...6,575,625 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:12730124) MGI PMID:12730124 NCBI chr13:97,928,480...97,936,594
Ensembl chr13:97,928,634...97,936,589 		JBrowse link
G DNAAF19 dynein axonemal assembly factor 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G DNAAF3 dynein axonemal assembly factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:47,753,085...47,762,340
Ensembl chr 6:47,753,062...47,762,238 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in
acts_upstream_of_or_within 		ISO (PMID:23872636)
(PMID:25807483) 		UniProt
MGI		 PMID:23872636 PMID:25807483 NCBI chr26:27,946,092...28,024,495 JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr26:27,960,224...28,013,105 JBrowse link
G DNAH11 dynein axonemal heavy chain 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:36,350,606...36,722,018
Ensembl chr21:36,350,707...36,720,511 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:13,401,980...13,718,900
Ensembl chr 4:13,401,092...13,652,755 		JBrowse link
G DNAI1 dynein axonemal intermediate chain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:46,058,280...46,155,989
Ensembl chr12:46,090,829...46,128,839 		JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:47,318,477...47,348,767
Ensembl chr16:47,319,138...47,348,839 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:94,612,383...94,633,729
Ensembl chr 9:94,612,460...94,633,537 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr14:81,188,261...81,245,064 JBrowse link
G DRC4 dynein regulatory complex subunit 4 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chr 5:75,353,493...75,370,012
Ensembl chr 5:75,354,117...75,371,796 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:94,484,090...94,849,960
Ensembl chr 1:94,484,512...94,849,581 		JBrowse link
G DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:63,441,948...63,481,460
Ensembl chr14:63,440,155...63,481,479 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:94,797,157...94,803,725
Ensembl chr 9:94,798,088...94,803,629 		JBrowse link
G FOXF1 forkhead box F1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
G FOXH1 forkhead box H1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:138,685,137...138,688,451
Ensembl chr 8:138,685,626...138,687,144 		JBrowse link
G FOXJ1 forkhead box J1 involved_in
acts_upstream_of_or_within 		IEA Ensembl GO_REF:0000107 NCBI chr16:45,536,973...45,544,331
Ensembl chr16:45,539,510...45,544,299 		JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:1,419,432...1,523,342
Ensembl chr 5:1,415,664...1,521,843 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chr14:80,130,436...80,171,259 JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:80,138,354...80,171,200 JBrowse link
G IFT52 intraflagellar transport 52 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:20,154,246...20,211,754
Ensembl chr 2:20,152,036...20,211,682 		JBrowse link
G IFT74 intraflagellar transport 74 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:10804177) 		MGI PMID:10804177 PMID:15755804 NCBI chr 3:435,649...546,661
Ensembl chr 3:436,207...546,583 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:10220415) 		MGI PMID:10220415 PMID:15755804 NCBI chr23:35,496,770...35,554,536
Ensembl chr23:35,514,130...35,551,472 		JBrowse link
G LOC103247122 cryptic protein involved_in IEA TreeGrafter GO_REF:0000118
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:35,182,276...35,196,167
Ensembl chr16:35,182,568...35,199,858 		JBrowse link
G MMP21 matrix metallopeptidase 21 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr 9:118,387,926...118,400,048
Ensembl chr 9:118,389,666...118,398,807 		JBrowse link
G NEK8 NIMA related kinase 8 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr16:22,495,745...22,506,782 JBrowse link
G NEK8 NIMA related kinase 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr16:22,501,834...22,507,358 JBrowse link
G NKX3-2 NK3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:36,641,837...36,647,917
Ensembl chr27:36,641,932...36,644,353 		JBrowse link
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:59,685,437...59,899,458
Ensembl chr25:59,685,531...59,898,677 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:60,852,567...60,863,225
Ensembl chr 9:60,853,763...60,862,839 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G NOTCH2 notch receptor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:13,712,140...13,871,777
Ensembl chr20:13,712,292...13,871,784 		JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within ISO (PMID:17884984), (PMID:22357932)
(PMID:20350929) 		MGI PMID:17884984 PMID:20350929 PMID:22357932 NCBI chr14:33,962,173...33,975,040 JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:33,962,632...33,974,573 JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
G ODAD2 outer dynein arm docking complex subunit 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:27,369,965...27,563,798
Ensembl chr 9:27,369,971...27,550,110 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:10,349,063...10,360,292
Ensembl chr 6:10,349,069...10,360,250 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:86,907,173...87,367,935
Ensembl chr12:87,042,557...87,367,033 		JBrowse link
G PCSK6 proprotein convertase subtilisin/kexin type 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr29:19,758,198...19,949,875
Ensembl chr29:19,754,625...19,949,382 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:34715025) Ensembl
UniProt		 PMID:34715025 GO_REF:0000107 NCBI chr12:2,669,623...2,674,929
Ensembl chr12:2,670,241...2,675,646 		JBrowse link
G PIERCE2 piercer of microtubule wall 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,023,735...28,029,095
Ensembl chr26:28,023,603...28,028,929 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:9708732) BHF-UCL
Ensembl		 PMID:9708732 GO_REF:0000107 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr21:10,850,618...11,030,099 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within ISO (PMID:12062060) MGI PMID:12062060 NCBI chr 7:36,369,226...36,445,713
Ensembl chr 7:36,369,524...36,443,612 		JBrowse link
G PSKH1 protein serine kinase H1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:59,510,587...59,543,560
Ensembl chr 5:59,512,617...59,543,497 		JBrowse link
G RFX3 regulatory factor X3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:76,039,729...76,344,936
Ensembl chr12:76,096,465...76,338,204 		JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:8,516,589...8,522,224
Ensembl chr13:8,518,101...8,522,091 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092 		JBrowse link
G RTTN rotatin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:9,574,647...9,770,940
Ensembl chr18:9,575,159...9,772,596 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr20:85,600,171...85,662,732
Ensembl chr20:85,604,539...85,662,333 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:95,532,228...95,660,594
Ensembl chr 9:95,532,242...95,657,290 		JBrowse link
G TBC1D32 TBC1 domain family member 32 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr13:52,518,428...52,742,961 JBrowse link
G TBC1D32 TBC1 domain family member 32 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr13:52,519,851...52,668,754 JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:16556915) MGI PMID:16556915 NCBI chr19:5,980,114...5,986,313
Ensembl chr19:5,980,587...5,987,244 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:16705179) MGI PMID:16705179 NCBI chr18:62,691,705...62,698,265 JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr18:62,690,118...62,698,565 JBrowse link
G TMEM107 transmembrane protein 107 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:7,554,771...7,558,413
Ensembl chr16:7,555,009...7,557,085 		JBrowse link
G TMEM67 transmembrane protein 67 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr 8:88,726,783...88,818,111
Ensembl chr 8:88,726,837...88,792,049 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:1,664,316...1,675,006
Ensembl chr25:1,666,053...1,719,881 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:16496285)
(PMID:15384171) 		Ensembl
MGI		 PMID:15384171 PMID:16496285 GO_REF:0000107 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:72,004,705...72,063,438 JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:36,369,226...36,445,713
Ensembl chr 7:36,369,524...36,443,612 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:72,004,705...72,063,438 JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIMAP3 ciliary microtubule associated protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:22,250,933...22,269,420
Ensembl chr20:22,249,682...22,256,695 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046 		JBrowse link
G INVS inversin acts_upstream_of_or_within ISO (PMID:9192865) MGI PMID:9192865 NCBI chr12:39,138,586...39,333,758
Ensembl chr12:39,139,505...39,333,661 		JBrowse link
G LOC103228067 intraflagellar transport protein 122 homolog involved_in ISO (PMID:21209331) CACAO PMID:21209331 NCBI chr22:51,528,383...51,616,757
Ensembl chr22:51,528,254...51,616,682 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:75,391,833...75,399,003
Ensembl chr23:75,391,847...75,395,205 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:21131974) UniProt PMID:21131974 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr16:72,004,705...72,063,438 JBrowse link
G CFAP45 cilia and flagella associated protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:4,036,029...4,078,608
Ensembl chr20:4,050,311...4,078,587 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 acts_upstream_of_or_within ISO (PMID:33347437) MGI PMID:33347437 NCBI chr18:30,690,451...30,731,711
Ensembl chr18:30,691,006...30,725,354 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr 8:127,010,303...127,103,343
Ensembl chr 8:127,008,619...127,103,300 		JBrowse link
G DNAH11 dynein axonemal heavy chain 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:36,350,606...36,722,018
Ensembl chr21:36,350,707...36,720,511 		JBrowse link
G INVS inversin acts_upstream_of_or_within ISO (PMID:10549278) MGI PMID:10549278 NCBI chr12:39,138,586...39,333,758
Ensembl chr12:39,139,505...39,333,661 		JBrowse link
G LOC103215146 centriole and centriolar satellite protein OFD1 pseudogene involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:36,086,540...36,090,236 JBrowse link
G MEGF8 multiple EGF like domains 8 NOT|acts_upstream_of_or_within ISO (PMID:18043505) MGI PMID:18043505 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:10,349,063...10,360,292
Ensembl chr 6:10,349,069...10,360,250 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within 		ISO (PMID:27486780) GO_Central
MGI		 PMID:27486780 NCBI chr16:64,297,983...64,333,421 JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 Ensembl chr16:64,323,294...64,333,138 JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:12,222,396...12,256,802
Ensembl chr  X:12,222,760...12,256,557 		JBrowse link
G RFX3 regulatory factor X3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:76,039,729...76,344,936
Ensembl chr12:76,096,465...76,338,204 		JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CFAP45 cilia and flagella associated protein 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:4,036,029...4,078,608
Ensembl chr20:4,050,311...4,078,587 		JBrowse link
G CFAP52 cilia and flagella associated protein 52 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:8,937,515...9,000,363
Ensembl chr16:8,938,143...9,001,677 		JBrowse link
G CIROZ ciliated left-right organizer protein containing ZP-N domains involved_in ISO (PMID:39753129) UniProt PMID:39753129 NCBI chr20:120,776,751...120,836,716
Ensembl chr20:120,804,759...120,835,451 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:26,665,286...26,674,345
Ensembl chr24:26,665,106...26,674,063 		JBrowse link
G ENKUR enkurin, TRPC channel interacting protein acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr 9:24,710,588...24,740,173
Ensembl chr 9:24,707,109...24,740,516 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,669,623...2,674,929
Ensembl chr12:2,670,241...2,675,646 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLNR apelin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:16,007,092...16,011,868
Ensembl chr 1:16,008,300...16,009,601 		JBrowse link
G ARL13B ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:22554696) MGI PMID:22554696 NCBI chr22:86,648,924...86,722,006
Ensembl chr22:86,651,076...86,721,948 		JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:71,687,282...71,730,684
Ensembl chr24:71,687,238...71,730,696 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:65,282,311...65,436,007
Ensembl chr 1:65,282,318...65,435,834 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 Ensembl chr16:72,004,705...72,063,438 JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046 		JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within ISO (PMID:23742838) MGI PMID:23742838 NCBI chr 5:3,196,257...3,236,912 JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 5:3,196,267...3,230,902 JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr13:97,928,480...97,936,594
Ensembl chr13:97,928,634...97,936,589 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DNAAF19 dynein axonemal assembly factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:130,105,032...130,118,978
Ensembl chr20:130,104,639...130,117,139 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:6,599,056...6,608,613
Ensembl chr16:6,599,579...6,608,544 		JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,274,705...10,315,715
Ensembl chr12:10,275,064...10,315,040 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:94,797,157...94,803,725
Ensembl chr 9:94,798,088...94,803,629 		JBrowse link
G FOLR1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:63,405,513...63,413,372
Ensembl chr 1:63,406,597...63,413,352 		JBrowse link
G FOXH1 forkhead box H1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:138,685,137...138,688,451
Ensembl chr 8:138,685,626...138,687,144 		JBrowse link
G GATA4 GATA binding protein 4 involved_in ISO (PMID:15310850) BHF-UCL PMID:15310850 NCBI chr 8:7,348,145...7,432,574
Ensembl chr 8:7,349,660...7,400,562 		JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (PMID:9486664) MGI PMID:9486664 NCBI chr13:52,397,291...52,410,341
Ensembl chr13:52,396,109...52,410,339 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:56,928,164...56,935,675
Ensembl chr23:56,928,676...56,931,785 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:119,635,697...119,639,415
Ensembl chr 7:119,634,741...119,638,546 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042) MGI PMID:18930042 NCBI chr14:80,130,436...80,171,259 JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:80,138,354...80,171,200 JBrowse link
G IFT52 intraflagellar transport 52 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:20,154,246...20,211,754
Ensembl chr 2:20,152,036...20,211,682 		JBrowse link
G IFT57 intraflagellar transport 57 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:72,560,168...72,629,066
Ensembl chr22:72,560,221...72,632,158 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585 		JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chr 1:7,004,109...7,152,072
Ensembl chr 1:7,003,784...7,082,720 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10330409) MGI PMID:10330409 NCBI chr23:35,496,770...35,554,536
Ensembl chr23:35,514,130...35,551,472 		JBrowse link
G LBX1 ladybird homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:94,247,931...94,251,092
Ensembl chr 9:94,249,000...94,250,545 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chr11:12,016,542...12,170,496
Ensembl chr11:12,021,560...12,170,663 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:16680724) UniProt PMID:16680724 NCBI chr 4:82,702,378...82,887,491
Ensembl chr 4:82,706,738...82,788,152 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:8,286,551...8,288,777
Ensembl chr29:8,286,828...8,287,918 		JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:58,628,381...58,759,692
Ensembl chr18:58,633,926...58,759,609 		JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:75,391,833...75,399,003
Ensembl chr23:75,391,847...75,395,205 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:60,852,567...60,863,225
Ensembl chr 9:60,853,763...60,862,839 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:13,712,140...13,871,777
Ensembl chr20:13,712,292...13,871,784 		JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within ISO (PMID:17884984) MGI PMID:17884984 NCBI chr14:33,962,173...33,975,040 JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:33,962,632...33,974,573 JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
G OVOL2 ovo like zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:47,082,294...47,118,880
Ensembl chr 2:47,082,167...47,117,521 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:36,369,226...36,445,713
Ensembl chr 7:36,369,524...36,443,612 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:11517919) Ensembl
BHF-UCL		 PMID:11517919 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SMAD3 SMAD family member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:16,319,959...16,446,472
Ensembl chr26:16,320,933...16,446,527 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G SOX17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in 		ISO (PMID:17610846)
(PMID:17610846), (PMID:17655922) 		MGI
BHF-UCL		 PMID:17610846 PMID:17655922 NCBI chr 8:50,523,816...50,527,360
Ensembl chr 8:50,524,893...50,527,847 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:28,983,161...28,993,465
Ensembl chr17:28,983,002...28,992,995 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr20:85,600,171...85,662,732
Ensembl chr20:85,604,539...85,662,333 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:95,532,228...95,660,594
Ensembl chr 9:95,532,242...95,657,290 		JBrowse link
G TBX20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:15843409) Ensembl
BHF-UCL		 PMID:15843409 GO_REF:0000107 NCBI chr21:23,166,020...23,222,416
Ensembl chr21:23,166,109...23,224,657 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:109,952,100...109,966,328
Ensembl chr11:109,952,054...109,965,065 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:118,913,145...118,927,335
Ensembl chr11:118,913,078...118,928,281 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,521,066...3,549,301
Ensembl chr20:3,521,060...3,548,718 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:1,664,316...1,675,006
Ensembl chr25:1,666,053...1,719,881 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:16496285)
(PMID:15384171) 		Ensembl
MGI		 PMID:15384171 PMID:16496285 GO_REF:0000107 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
left/right axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:22554696) MGI PMID:22554696 NCBI chr22:86,648,924...86,722,006
Ensembl chr22:86,651,076...86,721,948 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chr13:97,928,480...97,936,594
Ensembl chr13:97,928,634...97,936,589 		JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:10,113,695...10,288,003
Ensembl chr10:10,121,075...10,287,954 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042)
(PMID:22554696) 		MGI PMID:18930042 PMID:22554696 NCBI chr14:80,130,436...80,171,259 JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:80,138,354...80,171,200 JBrowse link
G IFT25 intraflagellar transport 25 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:78,988,285...79,012,815
Ensembl chr20:78,991,285...79,013,157 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:27,026,932...27,060,044
Ensembl chr26:27,027,827...27,059,863 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:13,712,140...13,871,777
Ensembl chr20:13,712,292...13,871,784 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chr21:10,850,618...11,030,099 JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G ZIC3 Zic family member 3 involved_in ISO (PMID:17127413) MGI PMID:17127413 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:32,627,296...32,636,797
Ensembl chr16:32,627,819...32,636,880 		JBrowse link
regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF207 ring finger protein 207 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr20:125,520,902...125,532,165 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19706
    multicellular organismal process 7576
      pattern specification process 507
        regionalization 467
          left/right pattern formation 148
            determination of left/right symmetry + 140
            embryonic heart tube left/right pattern formation 7
            left/right axis specification 14
Path 2
Term Annotations click to browse term
  biological_process 19706
    developmental process 6945
      anatomical structure development 6521
        multicellular organism development 5240
          pattern specification process 507
            regionalization 467
              left/right pattern formation 148
                determination of left/right symmetry + 140
                embryonic heart tube left/right pattern formation 7
                left/right axis specification 14
paths to the root