Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:left/right pattern formation
go back to main search page
Accession:GO:0060972 term browser browse the term
Definition:The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within ISO (PMID:23742838) MGI PMID:23742838 NCBI chrNW_004955442:13,843,952...13,890,082
Ensembl chrNW_004955442:13,842,784...13,885,860 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 NOT|acts_upstream_of_or_within ISO (PMID:21203428) MGI PMID:21203428 NCBI chrNW_004955434:5,528,625...5,535,783 JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944400) BHF-UCL PMID:19944400 NCBI chrNW_004955564:132,497...149,399
Ensembl chrNW_004955564:132,760...149,399 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within ISO (PMID:20080492) MGI PMID:20080492 NCBI chrNW_004955485:8,670,261...8,691,545
Ensembl chrNW_004955485:8,670,261...8,691,541 		JBrowse link
G Foxj1 forkhead box J1 acts_upstream_of_or_within ISO (PMID:10873152) MGI PMID:10873152 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO (PMID:17027958) MGI PMID:17027958 NCBI chrNW_004955427:8,814,298...8,871,671
Ensembl chrNW_004955427:8,814,298...8,871,720 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within 		ISO (PMID:23063620)
(PMID:24052814)
(PMID:32203821), (PMID:32966817) 		UniProt
MGI		 PMID:23063620 PMID:24052814 PMID:32203821 PMID:32966817 NCBI chrNW_004955555:549,921...591,978
Ensembl chrNW_004955555:548,416...591,978 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) MGI PMID:34486668 NCBI chrNW_004955493:760,729...771,996 JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:20080492) MGI PMID:20080492 NCBI chrNW_004955462:7,879,754...8,073,207
Ensembl chrNW_004955462:7,880,157...8,073,186 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:20080492) MGI PMID:20080492 NCBI chrNW_004955456:5,497,126...5,582,342 JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO (PMID:16801545) MGI PMID:16801545 NCBI chrNW_004955445:8,232,084...8,237,893
Ensembl chrNW_004955445:8,231,924...8,237,996 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:23303524)
(PMID:23184148) 		MGI PMID:23184148 PMID:23303524 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chrNW_004955456:5,497,126...5,582,342 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO (PMID:31887266) MGI PMID:31887266 NCBI chrNW_004955467:8,777,078...8,779,164
Ensembl chrNW_004955467:8,777,071...8,779,164 		JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955506:2,783,837...2,840,248
Ensembl chrNW_004955506:2,784,548...2,838,026 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944405) BHF-UCL PMID:19944405 NCBI chrNW_004955564:132,497...149,399
Ensembl chrNW_004955564:132,760...149,399 		JBrowse link
G Dnaaf19 dynein axonemal assembly factor 19 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chrNW_004955451:17,690,148...17,693,285
Ensembl chrNW_004955451:17,690,368...17,693,285 		JBrowse link
G Megf8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (PMID:18043505) MGI PMID:18043505 NCBI chrNW_004955555:549,921...591,978
Ensembl chrNW_004955555:548,416...591,978 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) BHF-UCL PMID:9354794 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (PMID:15750185) MGI PMID:15750185 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in ISO (PMID:15466485) BHF-UCL PMID:15466485 NCBI chrNW_004955415:32,012,637...32,015,965
Ensembl chrNW_004955415:32,012,637...32,015,965 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (PMID:11076684) MGI PMID:11076684 NCBI chrNW_004955408:8,848,723...8,851,804
Ensembl chrNW_004955408:8,848,559...8,851,994 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (PMID:9576835) MGI PMID:9576835 NCBI chrNW_004955403:33,478,034...33,481,613
Ensembl chrNW_004955403:33,478,924...33,481,608 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within 		ISO (PMID:23063620)
(PMID:18043505) 		UniProt
MGI		 PMID:18043505 PMID:23063620 NCBI chrNW_004955555:549,921...591,978
Ensembl chrNW_004955555:548,416...591,978 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in ISO (PMID:26437028) UniProt PMID:26437028 NCBI chrNW_004955477:3,650,874...3,658,059
Ensembl chrNW_004955477:3,650,874...3,658,059 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (PMID:25192045) MGI PMID:25192045 NCBI chrNW_004955495:2,318,840...2,330,966
Ensembl chrNW_004955495:2,318,471...2,330,508 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO (PMID:10349618) MGI PMID:10349618 NCBI chrNW_004955439:15,675,680...15,683,542
Ensembl chrNW_004955439:15,676,095...15,683,554 		JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chrNW_004955501:5,799,879...5,837,022
Ensembl chrNW_004955501:5,799,879...5,837,022 		JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in ISO (PMID:15466485) BHF-UCL PMID:15466485 NCBI chrNW_004955415:32,012,637...32,015,965
Ensembl chrNW_004955415:32,012,637...32,015,965 		JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:17507406) BHF-UCL PMID:17507406 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smad2 SMAD family member 2 involved_in ISO (PMID:17239842) BHF-UCL PMID:17239842 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:24585447) MGI PMID:24585447 NCBI chrNW_004955404:10,731,987...10,735,599 JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein axonemal heavy chain 11 acts_upstream_of_or_within ISO (PMID:18414654) MGI PMID:18414654 NCBI chrNW_004955410:24,045,333...24,352,626
Ensembl chrNW_004955410:24,044,886...24,352,626 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:11959836) UniProt PMID:11959836 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO (PMID:15531373) MGI PMID:15531373 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694 		JBrowse link
G Acvr1c activin A receptor type 1C NOT|acts_upstream_of_or_within ISO (PMID:15485907) MGI PMID:15485907 NCBI chrNW_004955449:15,814,230...15,864,747
Ensembl chrNW_004955449:15,813,856...15,858,537 		JBrowse link
G Acvr2a activin A receptor type 2A acts_upstream_of_or_within ISO (PMID:16991118) MGI PMID:16991118 NCBI chrNW_004955440:13,849,926...13,931,374
Ensembl chrNW_004955440:13,849,926...13,931,374 		JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:16991118)
(PMID:9242489) 		MGI PMID:9242489 PMID:16991118 NCBI chrNW_004955427:25,438,652...25,467,360
Ensembl chrNW_004955427:25,438,652...25,467,360 		JBrowse link
G Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chrNW_004955431:9,059,074...9,097,597
Ensembl chrNW_004955431:9,059,098...9,097,510 		JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955419:26,801,924...26,852,116
Ensembl chrNW_004955419:26,801,925...26,851,627 		JBrowse link
G Ap1b1 adaptor related protein complex 1 subunit beta 1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955455:3,632,053...3,686,007
Ensembl chrNW_004955455:3,632,053...3,686,046 		JBrowse link
G Arl13b ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chrNW_004955407:3,402,214...3,477,839
Ensembl chrNW_004955407:3,402,908...3,460,105 		JBrowse link
G Bicc1 BicC family RNA binding protein 1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955425:12,237,611...12,522,321
Ensembl chrNW_004955425:12,333,747...12,519,872 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO (PMID:24947469)
(PMID:25807483) 		MGI PMID:24947469 PMID:25807483 NCBI chrNW_004955480:8,404,239...8,514,792
Ensembl chrNW_004955480:8,400,284...8,514,736 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:25807483)
(PMID:28289722) 		MGI PMID:25807483 PMID:28289722 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:28182636) MGI PMID:28182636 NCBI chrNW_004955506:2,783,837...2,840,248
Ensembl chrNW_004955506:2,784,548...2,838,026 		JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955405:25,533,037...25,607,021
Ensembl chrNW_004955405:25,533,525...25,606,212 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 involved_in ISO (PMID:26531781) UniProt PMID:26531781 NCBI chrNW_004955402:35,295,007...35,318,800
Ensembl chrNW_004955402:35,295,007...35,318,799 		JBrowse link
G Ciroz ciliated left-right organizer protein containing ZP-N domains acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955486:2,691,850...2,717,340
Ensembl chrNW_004955486:2,674,528...2,717,568 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15750185) UniProt PMID:15750185 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677 		JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 acts_upstream_of_or_within ISO (PMID:24091014) MGI PMID:24091014 NCBI chrNW_004955437:6,728,703...6,839,903
Ensembl chrNW_004955437:6,728,523...6,839,903 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (PMID:15466485) MGI PMID:15466485 NCBI chrNW_004955415:32,012,637...32,015,965
Ensembl chrNW_004955415:32,012,637...32,015,965 		JBrowse link
G Daw1 dynein assembly factor with WD repeats 1 acts_upstream_of_or_within ISO (PMID:25807483)
(PMID:28289722) 		MGI PMID:25807483 PMID:28289722 NCBI chrNW_004955453:6,736,998...6,788,214
Ensembl chrNW_004955453:6,735,718...6,789,124 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:12421714) 		MGI PMID:12421714 PMID:15755804 NCBI chrNW_004955520:1,591,831...1,711,871
Ensembl chrNW_004955520:1,591,737...1,712,449 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:12730124) MGI PMID:12730124 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604 		JBrowse link
G Dnaaf3 dynein axonemal assembly factor 3 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955567:1,030,467...1,036,562
Ensembl chrNW_004955567:1,030,691...1,036,283 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in
acts_upstream_of_or_within 		ISO (PMID:23872636)
(PMID:25807483) 		UniProt
MGI		 PMID:23872636 PMID:25807483 NCBI chrNW_004955409:498,450...523,067 JBrowse link
G Dnah11 dynein axonemal heavy chain 11 acts_upstream_of_or_within ISO (PMID:12142464), (PMID:18022865), (PMID:22184204), (PMID:22499950)
(PMID:25807483)
(PMID:10556073)
(PMID:27340223)
(PMID:9353118) 		SYSCILIA_CCNET
MGI		 PMID:9353118 PMID:10556073 PMID:12142464 PMID:18022865 PMID:22184204 More... MGI:48750 NCBI chrNW_004955410:24,045,333...24,352,626
Ensembl chrNW_004955410:24,044,886...24,352,626 		JBrowse link
G Dnah5 dynein axonemal heavy chain 5 acts_upstream_of_or_within ISO (PMID:11788826), (PMID:17515466), (PMID:22499950)
(PMID:11912187)
(PMID:25807483)
(PMID:28289722) 		SYSCILIA_CCNET
MGI		 PMID:11788826 PMID:11912187 PMID:17515466 PMID:22499950 PMID:25807483 More... NCBI chrNW_004955426:3,105,631...3,406,587
Ensembl chrNW_004955426:3,106,410...3,353,502 		JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 acts_upstream_of_or_within ISO (PMID:11231901), (PMID:17515466), (PMID:22499950)
(PMID:25807483) 		SYSCILIA_CCNET
MGI		 PMID:11231901 PMID:17515466 PMID:22499950 PMID:25807483 NCBI chrNW_004955472:1,599,265...1,668,214
Ensembl chrNW_004955472:1,599,493...1,668,024 		JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 acts_upstream_of_or_within ISO (PMID:18950741) SYSCILIA_CCNET PMID:18950741 NCBI chrNW_004955553:1,188,279...1,212,053
Ensembl chrNW_004955553:1,188,279...1,212,053 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004955485:8,670,261...8,691,545
Ensembl chrNW_004955485:8,670,261...8,691,541 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955469:8,416,934...8,479,961
Ensembl chrNW_004955469:8,417,017...8,479,802 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO (PMID:15755804), (PMID:16061793)
(PMID:16229832), (PMID:25807483) 		MGI PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 NCBI chrNW_004955412:6,267,726...6,518,888
Ensembl chrNW_004955412:6,268,214...6,518,468 		JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 acts_upstream_of_or_within ISO (PMID:15371312) MGI PMID:15371312 NCBI chrNW_004955441:10,928,577...10,961,194
Ensembl chrNW_004955441:10,928,343...10,961,194 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO (PMID:15329346) MGI PMID:15329346 NCBI chrNW_004955446:18,163,117...18,244,840
Ensembl chrNW_004955446:18,163,117...18,245,199 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:10411502) MGI PMID:10411502 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11493558) MGI PMID:11493558 NCBI chrNW_004955541:1,341,715...1,345,397
Ensembl chrNW_004955541:1,317,114...1,346,590 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO (PMID:12642485) MGI PMID:12642485 NCBI chrNW_004955454:3,094,015...3,096,060
Ensembl chrNW_004955454:3,094,033...3,095,512 		JBrowse link
G Foxj1 forkhead box J1 involved_in
acts_upstream_of_or_within 		ISO (PMID:31630787)
(PMID:25807483) 		UniProt
MGI		 PMID:25807483 PMID:31630787 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302 		JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chrNW_004955541:3,477,067...3,494,991
Ensembl chrNW_004955541:3,476,451...3,496,572 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955442:15,625,429...15,719,006
Ensembl chrNW_004955442:15,630,501...15,718,484 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chrNW_004955469:9,418,599...9,455,026
Ensembl chrNW_004955469:9,418,609...9,455,026 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (PMID:15930098) MGI PMID:15930098 NCBI chrNW_004955445:13,542,726...13,580,204
Ensembl chrNW_004955445:13,543,804...13,580,204 		JBrowse link
G Ift74 intraflagellar transport 74 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955472:7,779,705...7,872,423
Ensembl chrNW_004955472:7,775,981...7,872,423 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:10804177)
(PMID:15755804) 		MGI PMID:10804177 PMID:15755804 NCBI chrNW_004955497:1,338,959...1,454,788
Ensembl chrNW_004955497:1,338,904...1,455,122 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10220415)
(PMID:15755804) 		MGI PMID:10220415 PMID:15755804 NCBI chrNW_004955408:4,072,823...4,115,975
Ensembl chrNW_004955408:4,069,639...4,115,998 		JBrowse link
G Megf8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955555:549,921...591,978
Ensembl chrNW_004955555:548,416...591,978 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO (PMID:19776033)
(PMID:21045211) 		MGI PMID:19776033 PMID:21045211 NCBI chrNW_004955451:4,805,542...4,818,233
Ensembl chrNW_004955451:4,804,838...4,821,556 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in
acts_upstream_of_or_within 		ISO (PMID:26429889), (PMID:26437028)
(PMID:26437028)
(PMID:25807483) 		UniProt
MGI		 PMID:25807483 PMID:26429889 PMID:26437028 NCBI chrNW_004955477:3,650,874...3,658,059
Ensembl chrNW_004955477:3,650,874...3,658,059 		JBrowse link
G Nek8 NIMA related kinase 8 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955481:4,417,773...4,427,885
Ensembl chrNW_004955481:4,417,773...4,427,885 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO (PMID:15329346) MGI PMID:15329346 NCBI chrNW_004955480:10,212,929...10,215,814
Ensembl chrNW_004955480:10,213,761...10,216,860 		JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004955462:7,879,754...8,073,207
Ensembl chrNW_004955462:7,880,157...8,073,186 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:28182636)
(PMID:11311163)
(PMID:12231623)
(PMID:16496285)
(PMID:15466485)
(PMID:12642485), (PMID:12654299) 		MGI PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 PMID:15466485 More... NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:7789282)
(PMID:12730124) 		MGI PMID:7789282 PMID:12730124 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO (PMID:12730124) MGI PMID:12730124 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO (PMID:17884984), (PMID:22357932)
(PMID:20350929) 		MGI PMID:17884984 PMID:20350929 PMID:22357932 NCBI chrNW_004955424:12,424,984...12,431,562 JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) BHF-UCL PMID:18371931 NCBI chrNW_004955501:5,799,879...5,837,022
Ensembl chrNW_004955501:5,799,879...5,837,022 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 acts_upstream_of_or_within ISO (PMID:23849778)
(PMID:25807483) 		SYSCILIA_CCNET
MGI		 PMID:23849778 PMID:25807483 NCBI chrNW_004955462:1,709,493...1,885,094
Ensembl chrNW_004955462:1,709,493...1,884,900 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (PMID:25192045)
(PMID:25807483)
(PMID:31383820) 		SYSCILIA_CCNET
MGI		 PMID:25192045 PMID:25807483 PMID:31383820 NCBI chrNW_004955495:2,318,840...2,330,966
Ensembl chrNW_004955495:2,318,471...2,330,508 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955512:2,914,834...3,333,440
Ensembl chrNW_004955512:2,917,243...3,333,688 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 acts_upstream_of_or_within ISO (PMID:10809672) MGI PMID:10809672 NCBI chrNW_004955416:28,184,768...28,314,697
Ensembl chrNW_004955416:28,184,768...28,314,759 		JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:27305836)
(PMID:34715025) 		MGI
UniProt		 PMID:27305836 PMID:34715025 NCBI chrNW_004955513:4,047,764...4,055,692
Ensembl chrNW_004955513:4,052,413...4,055,691 		JBrowse link
G Pierce2 piercer of microtubule wall 2 involved_in ISO (PMID:34715025) UniProt PMID:34715025 NCBI chrNW_004955409:523,414...530,630
Ensembl chrNW_004955409:523,414...526,391 		JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within
involved_in 		ISO (PMID:11493526), (PMID:24091014)
(PMID:9708732)
(PMID:12397115)
(PMID:10498698)
(PMID:10572050)
(PMID:10499586) 		MGI
BHF-UCL		 PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 More... NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955456:5,497,126...5,582,342 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within ISO (PMID:12062060) MGI PMID:12062060 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817 		JBrowse link
G Pskh1 protein serine kinase H1 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955484:8,784,128...8,813,669
Ensembl chrNW_004955484:8,784,128...8,814,475 		JBrowse link
G Rfx3 regulatory factor X3 acts_upstream_of_or_within ISO (PMID:15121860) MGI PMID:15121860 NCBI chrNW_004955434:7,635,363...7,910,056
Ensembl chrNW_004955434:7,610,422...7,881,304 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO (PMID:17531978) MGI PMID:17531978 NCBI chrNW_004955411:11,418,744...11,422,766 JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17553904) MGI PMID:17553904 NCBI chrNW_004955433:11,321,504...11,423,981
Ensembl chrNW_004955433:11,322,590...11,424,569 		JBrowse link
G Rttn rotatin acts_upstream_of_or_within ISO (PMID:11900971) MGI PMID:11900971 NCBI chrNW_004955402:53,600,985...53,753,218
Ensembl chrNW_004955402:53,600,985...53,753,459 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10385121), (PMID:10411502), (PMID:10500184) MGI PMID:10385121 PMID:10411502 PMID:10500184 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:12421714)
(PMID:15755804) 		MGI PMID:12421714 PMID:15755804 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004955464:11,213,265...11,288,648
Ensembl chrNW_004955464:11,228,667...11,289,648 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:16155214) MGI PMID:16155214 NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677 		JBrowse link
G Tbc1d32 TBC1 domain family member 32 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955436:3,385,216...3,542,497
Ensembl chrNW_004955436:3,386,180...3,540,933 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:16556915) MGI PMID:16556915 NCBI chrNW_004955442:18,320,674...18,327,062
Ensembl chrNW_004955442:18,319,762...18,325,337 		JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:16705179) MGI PMID:16705179 NCBI chrNW_004955402:7,130,809...7,138,945
Ensembl chrNW_004955402:7,129,484...7,138,340 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO (PMID:31887266) MGI PMID:31887266 NCBI chrNW_004955467:8,777,078...8,779,164
Ensembl chrNW_004955467:8,777,071...8,779,164 		JBrowse link
G Tmem67 transmembrane protein 67 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chrNW_004955417:10,097,488...10,137,959
Ensembl chrNW_004955417:10,097,472...10,138,644 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:16291790) MGI PMID:16291790 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:24091014) MGI PMID:24091014 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684 		JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within 		ISO (PMID:9354794)
(PMID:16496285)
(PMID:15384171) 		BHF-UCL
MGI		 PMID:9354794 PMID:15384171 PMID:16496285 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955506:2,783,837...2,840,248
Ensembl chrNW_004955506:2,784,548...2,838,026 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944405) BHF-UCL PMID:19944405 NCBI chrNW_004955564:132,497...149,399
Ensembl chrNW_004955564:132,760...149,399 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chrNW_004955501:5,799,879...5,837,022
Ensembl chrNW_004955501:5,799,879...5,837,022 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) BHF-UCL PMID:21719175 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) BHF-UCL PMID:9354794 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955506:2,783,837...2,840,248
Ensembl chrNW_004955506:2,784,548...2,838,026 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944405) BHF-UCL PMID:19944405 NCBI chrNW_004955564:132,497...149,399
Ensembl chrNW_004955564:132,760...149,399 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chrNW_004955501:5,799,879...5,837,022
Ensembl chrNW_004955501:5,799,879...5,837,022 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) BHF-UCL PMID:9354794 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) BHF-UCL PMID:18371931 NCBI chrNW_004955501:5,799,879...5,837,022
Ensembl chrNW_004955501:5,799,879...5,837,022 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cimap3 ciliary microtubule associated protein 3 acts_upstream_of_or_within ISO (PMID:20643351) MGI PMID:20643351 NCBI chrNW_004955435:14,888,554...14,898,274
Ensembl chrNW_004955435:14,892,459...14,898,092 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (PMID:21209331) CACAO PMID:21209331 NCBI chrNW_004955429:17,795,757...17,858,609
Ensembl chrNW_004955429:17,794,879...17,858,609 		JBrowse link
G Invs inversin acts_upstream_of_or_within ISO (PMID:9192865) MGI PMID:9192865 NCBI chrNW_004955419:25,445,404...25,584,244
Ensembl chrNW_004955419:25,444,582...25,581,201 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in ISO (PMID:24052814) UniProt PMID:24052814 NCBI chrNW_004955555:549,921...591,978
Ensembl chrNW_004955555:548,416...591,978 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO (PMID:9192865) MGI PMID:9192865 NCBI chrNW_004955408:25,833,649...25,836,673
Ensembl chrNW_004955408:25,832,683...25,836,840 		JBrowse link
G Pitx2 paired like homeodomain 2 involved_in ISO (PMID:17234970) BHF-UCL PMID:17234970 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310 		JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:21131972) UniProt PMID:21131972 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:21131974) UniProt PMID:21131974 NCBI chrNW_004955506:2,783,837...2,840,248
Ensembl chrNW_004955506:2,784,548...2,838,026 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 acts_upstream_of_or_within ISO (PMID:33139725) MGI PMID:33139725 NCBI chrNW_004955468:11,672,332...11,711,395
Ensembl chrNW_004955468:11,672,462...11,699,245 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 acts_upstream_of_or_within ISO (PMID:33347437) MGI PMID:33347437 NCBI chrNW_004955402:35,295,007...35,318,800
Ensembl chrNW_004955402:35,295,007...35,318,799 		JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within 		ISO (PMID:23122589)
(PMID:27353389) 		BHF-UCL
MGI		 PMID:23122589 PMID:27353389 NCBI chrNW_004955461:7,204,165...7,311,524
Ensembl chrNW_004955461:7,204,339...7,312,241 		JBrowse link
G Dnah11 dynein axonemal heavy chain 11 acts_upstream_of_or_within ISO (PMID:10549278), (PMID:22102620) MGI PMID:10549278 PMID:22102620 NCBI chrNW_004955410:24,045,333...24,352,626
Ensembl chrNW_004955410:24,044,886...24,352,626 		JBrowse link
G Invs inversin acts_upstream_of_or_within ISO (PMID:10549278) MGI PMID:10549278 NCBI chrNW_004955419:25,445,404...25,584,244
Ensembl chrNW_004955419:25,444,582...25,581,201 		JBrowse link
G Megf8 multiple EGF like domains 8 NOT|acts_upstream_of_or_within ISO (PMID:18043505) MGI PMID:18043505 NCBI chrNW_004955555:549,921...591,978
Ensembl chrNW_004955555:548,416...591,978 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (PMID:31383820) MGI PMID:31383820 NCBI chrNW_004955495:2,318,840...2,330,966
Ensembl chrNW_004955495:2,318,471...2,330,508 		JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within 		ISO (PMID:27486780) GO_Central
MGI		 PMID:27486780 NCBI chrNW_004955451:16,098,495...16,112,985
Ensembl chrNW_004955451:16,098,586...16,112,630 		JBrowse link
G Ofd1 OFD1 centriole and centriolar satellite protein involved_in ISO (PMID:16311594) UniProt PMID:16311594 NCBI chrNW_004955519:4,433,747...4,470,842
Ensembl chrNW_004955519:4,433,855...4,471,070 		JBrowse link
G Rfx3 regulatory factor X3 involved_in ISO (PMID:15121860) UniProt PMID:15121860 NCBI chrNW_004955434:7,635,363...7,910,056
Ensembl chrNW_004955434:7,610,422...7,881,304 		JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:29317443) MGI PMID:29317443 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 involved_in ISO (PMID:33139725) GO_Central PMID:33139725 NCBI chrNW_004955468:11,672,332...11,711,395
Ensembl chrNW_004955468:11,672,462...11,699,245 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 involved_in ISO (PMID:33139725) GO_Central PMID:33139725 NCBI chrNW_004955467:7,461,258...7,524,178
Ensembl chrNW_004955467:7,459,322...7,524,522 		JBrowse link
G Ciroz ciliated left-right organizer protein containing ZP-N domains involved_in ISO (PMID:39753129) UniProt PMID:39753129 NCBI chrNW_004955486:2,691,850...2,717,340
Ensembl chrNW_004955486:2,674,528...2,717,568 		JBrowse link
G Dnaaf2 dynein axonemal assembly factor 2 acts_upstream_of_or_within ISO (PMID:31107948)
(PMID:23525783) 		MGI PMID:23525783 PMID:31107948 NCBI chrNW_004955409:13,019,941...13,028,378
Ensembl chrNW_004955409:13,020,313...13,027,849 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein involved_in
acts_upstream_of_or_within 		ISO (PMID:29257953) GO_Central
MGI		 PMID:29257953 NCBI chrNW_004955429:4,182,507...4,203,275
Ensembl chrNW_004955429:4,182,715...4,204,077 		JBrowse link
G Pierce1 piercer of microtubule wall 1 involved_in ISO (PMID:27305836) UniProt PMID:27305836 NCBI chrNW_004955513:4,047,764...4,055,692
Ensembl chrNW_004955513:4,052,413...4,055,691 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor involved_in ISO (PMID:23603510) BHF-UCL PMID:23603510 NCBI chrNW_004955511:2,321,445...2,324,417
Ensembl chrNW_004955511:2,322,920...2,324,068 		JBrowse link
G Arl13b ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:22554696) MGI PMID:22554696 NCBI chrNW_004955407:3,402,214...3,477,839
Ensembl chrNW_004955407:3,402,908...3,460,105 		JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 involved_in ISO (PMID:32179481) UniProt PMID:32179481 NCBI chrNW_004955438:16,005,570...16,041,668
Ensembl chrNW_004955438:16,005,570...16,042,115 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004955414:17,444,299...17,557,912
Ensembl chrNW_004955414:17,444,515...17,558,245 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004955506:2,783,837...2,840,248
Ensembl chrNW_004955506:2,784,548...2,838,026 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (PMID:15750185) MGI PMID:15750185 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within ISO (PMID:23742838) MGI PMID:23742838 NCBI chrNW_004955442:13,843,952...13,890,082
Ensembl chrNW_004955442:13,842,784...13,885,860 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944400), (PMID:19944405) BHF-UCL PMID:19944400 PMID:19944405 NCBI chrNW_004955564:132,497...149,399
Ensembl chrNW_004955564:132,760...149,399 		JBrowse link
G Dnaaf19 dynein axonemal assembly factor 19 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chrNW_004955451:17,690,148...17,693,285
Ensembl chrNW_004955451:17,690,368...17,693,285 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:22841628) BHF-UCL PMID:22841628 NCBI chrNW_004955486:9,464,390...9,469,984
Ensembl chrNW_004955486:9,464,313...9,469,984 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in ISO (PMID:22841628) BHF-UCL PMID:22841628 NCBI chrNW_004955467:9,675,912...9,683,996
Ensembl chrNW_004955467:9,675,912...9,683,996 		JBrowse link
G Eng endoglin involved_in ISO (PMID:10348742), (PMID:19703439) BHF-UCL PMID:10348742 PMID:19703439 NCBI chrNW_004955419:818,797...853,319
Ensembl chrNW_004955419:818,932...852,694 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:10411502) MGI PMID:10411502 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO (PMID:17286298) BHF-UCL PMID:17286298 NCBI chrNW_004955414:19,188,830...19,197,728
Ensembl chrNW_004955414:19,187,388...19,197,728 		JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (PMID:15363409) BHF-UCL PMID:15363409 NCBI chrNW_004955454:3,094,015...3,096,060
Ensembl chrNW_004955454:3,094,033...3,095,512 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (PMID:15310850) BHF-UCL PMID:15310850 NCBI chrNW_004955403:52,958,318...53,029,267
Ensembl chrNW_004955403:52,987,644...53,029,267 		JBrowse link
G Gja1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (PMID:9486664) MGI PMID:9486664 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (PMID:9500551) MGI PMID:9500551 NCBI chrNW_004955408:8,848,723...8,851,804
Ensembl chrNW_004955408:8,848,559...8,851,994 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (PMID:9171826) MGI PMID:9171826 NCBI chrNW_004955403:33,478,034...33,481,613
Ensembl chrNW_004955403:33,478,924...33,481,608 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO (PMID:14659802) MGI PMID:14659802 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042) MGI PMID:18930042 NCBI chrNW_004955469:9,418,599...9,455,026
Ensembl chrNW_004955469:9,418,609...9,455,026 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (PMID:15930098) MGI PMID:15930098 NCBI chrNW_004955445:13,542,726...13,580,204
Ensembl chrNW_004955445:13,543,804...13,580,204 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO (PMID:17027958) MGI PMID:17027958 NCBI chrNW_004955427:8,814,298...8,871,671
Ensembl chrNW_004955427:8,814,298...8,871,720 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10330409) MGI PMID:10330409 NCBI chrNW_004955408:4,072,823...4,115,975
Ensembl chrNW_004955408:4,069,639...4,115,998 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within ISO (PMID:12522123) MGI PMID:12522123 NCBI chrNW_004955485:9,003,329...9,005,987
Ensembl chrNW_004955485:9,003,329...9,005,989 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:16680724) UniProt PMID:16680724 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:16000382) MGI PMID:16000382 NCBI chrNW_004955402:10,392,308...10,502,576
Ensembl chrNW_004955402:10,392,308...10,502,576 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO (PMID:16510504)
(PMID:7628699), (PMID:9192865) 		MGI PMID:7628699 PMID:9192865 PMID:16510504 NCBI chrNW_004955408:25,833,649...25,836,673
Ensembl chrNW_004955408:25,832,683...25,836,840 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:16496285) MGI PMID:16496285 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259 		JBrowse link
G Notch2 notch receptor 2 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO (PMID:17884984) MGI PMID:17884984 NCBI chrNW_004955424:12,424,984...12,431,562 JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931), (PMID:20007846) BHF-UCL PMID:18371931 PMID:20007846 NCBI chrNW_004955501:5,799,879...5,837,022
Ensembl chrNW_004955501:5,799,879...5,837,022 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within ISO (PMID:17573777) MGI PMID:17573777 NCBI chrNW_004955415:26,825,284...26,843,438
Ensembl chrNW_004955415:26,825,284...26,843,438 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) BHF-UCL PMID:21719175 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:10557208) MGI PMID:10557208 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in 		ISO (PMID:10411502), (PMID:10500184)
(PMID:11517919) 		MGI
BHF-UCL		 PMID:10411502 PMID:10500184 PMID:11517919 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (PMID:15183723) MGI PMID:15183723 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in 		ISO (PMID:17610846)
(PMID:17610846), (PMID:17655922) 		MGI
BHF-UCL		 PMID:17610846 PMID:17655922 NCBI chrNW_004955454:13,689,403...13,690,019 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:15929941) MGI PMID:15929941 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057 		JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004955464:11,213,265...11,288,648
Ensembl chrNW_004955464:11,228,667...11,289,648 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:16155214) MGI PMID:16155214 NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677 		JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in 		ISO (PMID:15843407)
(PMID:15843409)
(PMID:15901664) 		MGI
BHF-UCL		 PMID:15843407 PMID:15843409 PMID:15901664 NCBI chrNW_004955460:7,794,313...7,856,906
Ensembl chrNW_004955460:7,794,313...7,856,906 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO (PMID:18723448)
(PMID:17460765) 		MGI PMID:17460765 PMID:18723448 NCBI chrNW_004955455:15,988,153...16,000,156
Ensembl chrNW_004955455:15,988,663...16,000,063 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (PMID:17050629) BHF-UCL PMID:17050629 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:20178780) MGI PMID:20178780 NCBI chrNW_004955482:5,404,739...5,415,243
Ensembl chrNW_004955482:5,404,739...5,415,243 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO (PMID:11440971) UniProt PMID:11440971 NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:16291790) MGI PMID:16291790 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684 		JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within 		ISO (PMID:9354794)
(PMID:16496285)
(PMID:15384171) 		BHF-UCL
MGI		 PMID:9354794 PMID:15384171 PMID:16496285 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
left/right axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ARF like GTPase 13B acts_upstream_of_or_within ISO (PMID:22554696) MGI PMID:22554696 NCBI chrNW_004955407:3,402,214...3,477,839
Ensembl chrNW_004955407:3,402,908...3,460,105 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (PMID:20678497) MGI PMID:20678497 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042)
(PMID:22554696) 		MGI PMID:18930042 PMID:22554696 NCBI chrNW_004955469:9,418,599...9,455,026
Ensembl chrNW_004955469:9,418,609...9,455,026 		JBrowse link
G Ift25 intraflagellar transport 25 acts_upstream_of_or_within ISO (PMID:22595669) MGI PMID:22595669 NCBI chrNW_004955464:5,299,206...5,324,136
Ensembl chrNW_004955464:5,299,534...5,324,136 		JBrowse link
G Mns1 meiosis specific nuclear structural 1 acts_upstream_of_or_within ISO (PMID:22396656) MGI PMID:22396656 NCBI chrNW_004955450:17,819,812...17,852,157
Ensembl chrNW_004955450:17,819,929...17,851,762 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259 		JBrowse link
G Notch2 notch receptor 2 involved_in ISO (PMID:12730124) BHF-UCL PMID:12730124 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173 		JBrowse link
G Pitx2 paired like homeodomain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (PMID:21307093) BHF-UCL PMID:21307093 NCBI chrNW_004955456:5,497,126...5,582,342 JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:9636176) MGI PMID:9636176 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:17127413) MGI PMID:17127413 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 involved_in ISO (PMID:15042700) BHF-UCL PMID:15042700 NCBI chrNW_004955451:2,458,612...2,466,264
Ensembl chrNW_004955451:2,457,568...2,466,639 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12627
    multicellular organismal process 6318
      pattern specification process 451
        regionalization 417
          left/right pattern formation 133
            determination of left/right symmetry + 125
            embryonic heart tube left/right pattern formation 7
            left/right axis specification 13
Path 2
Term Annotations click to browse term
  biological_process 12627
    developmental process 5998
      anatomical structure development 5669
        multicellular organism development 4634
          pattern specification process 451
            regionalization 417
              left/right pattern formation 133
                determination of left/right symmetry + 125
                embryonic heart tube left/right pattern formation 7
                left/right axis specification 13
paths to the root