ONTOLOGY REPORT - ANNOTATIONS
Term: lung cell differentiation
Accession: GO:0060479
browse the term
Definition: The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate.
Synonyms: exact_synonym: pulmonary cell differentiation
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Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:2148569 (PMID:19805295)
RGD
PMID:19805295
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108067 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
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Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:107516 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3583755 (PMID:22797898)
RGD
PMID:22797898
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
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Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:31837950)
RGD
PMID:31837950
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Ctnnb1
catenin beta 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1858008|MGI:2445707|MGI:2679524 (PMID:16040629)
Ensembl RGD
PMID:16040629
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Dhcr7
7-dehydrocholesterol reductase
acts_upstream_of_or_within
ISO
MGI:2387406 (PMID:15005800)
RGD
PMID:15005800
NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055
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Foxa1
forkhead box A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1347476 (PMID:15668254)
Ensembl RGD
PMID:15668254
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
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Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347472 (PMID:15668254)
RGD
PMID:15668254
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
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Grhl2
grainyhead-like transcription factor 2
involved_in
ISO
(PMID:22955271)
RGD
PMID:22955271
NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
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Ppp3r1
protein phosphatase 3, regulatory subunit B, alpha
acts_upstream_of_or_within
ISO
MGI:3044031 (PMID:16998587)
RGD
PMID:16998587
NCBI chr14:91,556,743...91,606,391
Ensembl chr14:91,604,121...91,606,907
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Pthlh
parathyroid hormone-like hormone
acts_upstream_of_or_within
ISO
MGI:2154515 (PMID:15162506)
RGD
PMID:15162506
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
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Sav1
salvador family WW domain containing protein 1
acts_upstream_of_or_within
ISO
MGI:3790763 (PMID:18369314)
RGD
PMID:18369314
NCBI chr 6:88,478,536...88,500,121
Ensembl chr 6:88,478,539...88,499,968
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:24191021)
RGD
PMID:24191021
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Tmem38b
transmembrane protein 38B
acts_upstream_of_or_within
ISO
MGI:3716065 (PMID:19515693)
RGD
PMID:19515693
NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
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Yap1
Yes1 associated transcriptional regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3053959|MGI:5316446 (PMID:25043473)
Ensembl RGD
PMID:25043473
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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Agr2
anterior gradient 2, protein disulphide isomerase family member
acts_upstream_of_or_within
ISO
(PMID:22675208)
RGD
PMID:22675208
NCBI chr 6:52,708,602...52,729,378
Ensembl chr 6:52,708,602...52,729,371
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Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:17003488)
RGD
PMID:17003488
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
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Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of_or_within
ISO
(PMID:17347682)
RGD
PMID:17347682
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
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Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:9126746)
RGD
PMID:9126746
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
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Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
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Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
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Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
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Foxj1
forkhead box J1
involved_in
ISO IEA
(PMID:20539013) GO_REF:0000107
RGD Ensembl
PMID:20539013
GO_REF:0000107
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
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Tp73
tumor protein p73
involved_in
ISO
(PMID:34077761)
RGD
PMID:34077761
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
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Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1344405|MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
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Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1344405|MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
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Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO
MGI:4999627 (PMID:21408140)
RGD
PMID:21408140
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
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Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
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Klf2
KLF transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:22001906)
RGD
PMID:22001906
NCBI chr16:17,521,107...17,523,739
Ensembl chr16:17,514,552...17,523,944
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Kras
KRAS proto-oncogene, GTPase
acts_upstream_of
ISO
(PMID:24058167)
RGD
PMID:24058167
NCBI chr 4:178,185,418...178,218,484
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Lta4h
leukotriene A4 hydrolase
IEP
RGD
PMID:15805137
RGD:2316585
NCBI chr 7:27,969,796...28,001,600
Ensembl chr 7:27,969,789...28,001,600
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Ncor2
nuclear receptor co-repressor 2
acts_upstream_of_or_within
ISO
MGI:3829987|MGI:98742|MGI:98743 (PMID:22001906)
RGD
PMID:22001906
NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
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Sox9
SRY-box transcription factor 9
acts_upstream_of
ISO
MGI:2385468 (PMID:24058167)
RGD
PMID:24058167
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Thra
thyroid hormone receptor alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1337080|MGI:98743 (PMID:22001906)
Ensembl RGD
PMID:22001906
GO_REF:0000107
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
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Thrb
thyroid hormone receptor beta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1337080|MGI:98742 (PMID:22001906)
Ensembl RGD
PMID:22001906
GO_REF:0000107
NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
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Aimp2
aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3497919 (PMID:12819782)
Ensembl RGD
PMID:12819782
GO_REF:0000107
NCBI chr12:10,701,194...10,710,772
Ensembl chr12:10,701,194...10,710,769
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Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:15531758)
RGD
PMID:15531758
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
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Fndc3b
fibronectin type III domain containing 3B
acts_upstream_of_or_within
ISO
MGI:4822558 (PMID:21704616)
RGD
PMID:21704616
NCBI chr 2:110,311,439...110,617,504
Ensembl chr 2:110,312,694...110,547,830
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Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108067 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
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Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
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Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:107516 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
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Rbbp9
RB binding protein 9, serine hydrolase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:32484881)
Ensembl RGD
PMID:32484881
GO_REF:0000107
NCBI chr 3:131,925,095...131,939,042
Ensembl chr 3:131,925,341...131,932,156
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