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ONTOLOGY REPORT - ANNOTATIONS

Term:face development
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Accession:GO:0060324 term browser browse the term
Definition:The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head.


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face development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO
IEA		 MGI:1857891|MGI:1861722 (PMID:17184764)
GO_REF:0000107		 RGD
Ensembl		 PMID:17184764 GO_REF:0000107 NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 acts_upstream_of_or_within ISO
IEA		 MGI:107928 (PMID:17184764)
GO_REF:0000107		 RGD
Ensembl		 PMID:17184764 GO_REF:0000107 NCBI chr 1:129,392,516...129,436,552
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:33996804) RGD PMID:33996804 NCBI chr19:67,848,836...68,007,491
Ensembl chr19:50,940,299...51,098,962 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO
IEA		 MGI:3055492 (PMID:18443298)
GO_REF:0000107		 RGD
Ensembl		 PMID:18443298 GO_REF:0000107 NCBI chr 8:68,627,739...68,661,232
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:97847 (PMID:18952847) RGD PMID:18952847 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO
IEA		 (PMID:15300250)
GO_REF:0000107		 RGD
Ensembl		 PMID:15300250 GO_REF:0000107 NCBI chr 5:26,609,245...26,792,736
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:3773699 (PMID:18199583)		 Ensembl
RGD		 PMID:18199583 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO
IEA		 MGI:4942413 (PMID:21377456)
GO_REF:0000107		 RGD
Ensembl		 PMID:21377456 GO_REF:0000107 NCBI chr 7:70,280,360...70,415,277
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Hoxb3 homeo box B3 acts_upstream_of_or_within ISO
IEA		 (PMID:21320481)
GO_REF:0000107		 RGD
Ensembl		 PMID:21320481 GO_REF:0000107 NCBI chr10:81,786,001...81,810,655
Ensembl chr10:81,299,357...81,313,107 		JBrowse link
G Itga4 integrin subunit alpha 4 acts_upstream_of_or_within ISO MGI:1857206 (PMID:7539359) RGD PMID:7539359 NCBI chr 3:84,569,487...84,646,276
Ensembl chr 3:64,163,085...64,233,715 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1346867 (PMID:18952847)
GO_REF:0000107		 RGD
Ensembl		 PMID:18952847 GO_REF:0000107 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within ISO
IEA		 MGI:1346866 (PMID:18952847)
GO_REF:0000107		 RGD
Ensembl		 PMID:18952847 GO_REF:0000107 NCBI chr 7:9,241,449...9,264,216
Ensembl chr 7:8,580,905...8,610,243 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1346859 (PMID:18952847)
GO_REF:0000107		 RGD
Ensembl		 PMID:18952847 GO_REF:0000107 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (PMID:18952847) RGD PMID:18952847 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO
IEA		 MGI:3608879 (PMID:18443298)
GO_REF:0000107		 RGD
Ensembl		 PMID:18443298 GO_REF:0000107 NCBI chr 3:144,654,563...144,672,831
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO
IEA		 MGI:88190 (PMID:18952847)
GO_REF:0000107		 RGD
Ensembl		 PMID:18952847 GO_REF:0000107 NCBI chr 4:150,352,158...150,412,813
Ensembl chr 4:148,679,530...148,740,317 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO
IEA		 MGI:97858 (PMID:7607067)
GO_REF:0000107		 RGD
Ensembl		 PMID:7607067 GO_REF:0000107 NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO
IEA		 MGI:97856 (PMID:7607067)
GO_REF:0000107		 RGD
Ensembl		 PMID:7607067 GO_REF:0000107 NCBI chr 7:135,246,427...135,268,889
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Sox3 SRY-box transcription factor 3 involved_in ISO (PMID:17728342) RGD PMID:17728342 NCBI chr  X:144,344,892...144,346,971
Ensembl chr  X:139,309,329...139,310,678 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO
IEA		 MGI:3522206 (PMID:18952847)
GO_REF:0000107		 RGD
Ensembl		 PMID:18952847 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA		 (PMID:19918918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19918918 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zfand5 zinc finger AN1-type containing 5 acts_upstream_of_or_within ISO
IEA		 MGI:3526860 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 1:228,191,064...228,206,947
Ensembl chr 1:218,766,614...218,775,843 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:3698161 (PMID:17127413) RGD PMID:17127413 NCBI chr  X:141,159,623...141,165,587
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
face morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO
IEA		 (PMID:21782149)
GO_REF:0000107		 RGD
Ensembl		 PMID:21782149 GO_REF:0000107 NCBI chr19:67,848,836...68,007,491
Ensembl chr19:50,940,299...51,098,962 		JBrowse link
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:3526852 (PMID:17143286) RGD PMID:17143286 NCBI chr20:20,305,693...20,489,689
Ensembl chr20:20,307,731...20,487,433 		JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within ISO MGI:2179287 (PMID:11773073) RGD PMID:11773073 NCBI chr 5:27,398,933...27,611,519
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G Cdk2ap1 cyclin-dependent kinase 2 associated protein 1 acts_upstream_of_or_within ISO MGI:3512185 (PMID:19229340) RGD PMID:19229340 NCBI chr12:37,910,718...37,919,446
Ensembl chr12:32,249,747...32,258,479 		JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:97009 (PMID:17440987)
GO_REF:0000107		 RGD
Ensembl		 PMID:17440987 GO_REF:0000107 NCBI chr10:80,380,458...80,397,461
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Crebbp CREB binding protein involved_in ISO (PMID:19822209) RGD PMID:19822209 NCBI chr10:11,842,307...11,968,266
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Crispld1 cysteine-rich secretory protein LCCL domain containing 1 involved_in ISO (PMID:21254358) RGD PMID:21254358 NCBI chr 5:6,050,970...6,098,265
Ensembl chr 5:1,274,647...1,314,926 		JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 involved_in ISO
IBA
IEA		 (PMID:21254358)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:21254358 GO_REF:0000033 GO_REF:0000107 NCBI chr19:64,961,764...65,020,099
Ensembl chr19:48,053,287...48,110,465 		JBrowse link
G Csrnp1 cysteine and serine rich nuclear protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3526868 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 8:128,582,364...128,594,163
Ensembl chr 8:119,704,713...119,718,183 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO
IEA		 (PMID:17699607)
GO_REF:0000107		 RGD
Ensembl		 PMID:17699607 GO_REF:0000107 NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO
IEA		 MGI:2180474 (PMID:16330189)
GO_REF:0000107		 RGD
Ensembl		 PMID:16330189 GO_REF:0000107 NCBI chr 4:35,965,579...35,969,973
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:19822209) RGD PMID:19822209 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO MGI:4418468|MGI:98493 (PMID:22921202) RGD PMID:22921202 NCBI chr16:75,787,411...75,868,584
Ensembl chr16:69,084,914...69,163,606 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:1202879 (PMID:17699607)
GO_REF:0000107		 RGD
Ensembl		 PMID:17699607 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191|MGI:4415718 (PMID:19653321), (PMID:19700620) RGD PMID:19653321 PMID:19700620 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within ISO
IEA		 MGI:88467 (PMID:17440987)
GO_REF:0000107		 RGD
Ensembl		 PMID:17440987 GO_REF:0000107 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10742093), (PMID:11332647), (PMID:12651933)
MGI:1933766|MGI:97493 (PMID:16330189), (PMID:20123092)
(PMID:11369996)		 RGD PMID:10742093 PMID:11332647 PMID:11369996 PMID:12651933 PMID:16330189 More... NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IEA		 (PMID:15146186), (PMID:19242925)
GO_REF:0000107		 RGD
Ensembl		 PMID:15146186 PMID:19242925 GO_REF:0000107 NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Nog noggin acts_upstream_of_or_within ISO
IEA		 MGI:1862000 (PMID:16712836)
GO_REF:0000107		 RGD
Ensembl		 PMID:16712836 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Pax9 paired box 9 acts_upstream_of_or_within ISO
IEA		 MGI:97168 (PMID:20123092)
GO_REF:0000107		 RGD
Ensembl		 PMID:20123092 GO_REF:0000107 NCBI chr 6:79,917,466...79,938,551
Ensembl chr 6:74,182,568...74,203,506 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO
IEA		 MGI:1926728 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO
IEA		 MGI:3526857 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 1:194,858,239...194,909,418
Ensembl chr 1:185,428,048...185,479,156 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:4941929|MGI:5645931 (PMID:23913870), (PMID:25190059)		 Ensembl
RGD		 PMID:23913870 PMID:25190059 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO
IEA		 (PMID:11704759)
GO_REF:0000107		 RGD
Ensembl		 PMID:11704759 GO_REF:0000107 NCBI chr12:41,026,079...41,085,577
Ensembl chr12:35,383,144...35,424,925 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
IEA		 (PMID:20512159)
GO_REF:0000107		 RGD
Ensembl		 PMID:20512159 GO_REF:0000107 NCBI chr13:41,908,179...41,981,611
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Rras RAS related involved_in ISO
IEA		 (PMID:24705357)
GO_REF:0000107		 RGD
Ensembl		 PMID:24705357 GO_REF:0000107 NCBI chr 1:104,637,061...104,640,841
Ensembl chr 1:95,500,566...95,504,357 		JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3526869 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 2:154,437,217...155,198,560
Ensembl chr 2:152,126,953...152,888,585 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (PMID:18498113) RGD PMID:18498113 NCBI chr 7:110,056,897...110,059,283
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO
IEA		 MGI:3526851 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr20:29,590,652...29,637,064
Ensembl chr20:29,047,796...29,094,084 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:11731796), (PMID:9284043) RGD PMID:9284043 PMID:11731796 NCBI chr 5:170,995,851...171,064,957
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA		 (PMID:17273977)
GO_REF:0000107		 RGD
Ensembl		 PMID:17273977 GO_REF:0000107 NCBI chr 8:67,444,757...67,464,719
Ensembl chr 8:58,549,736...58,568,860 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179191 (PMID:20501333)		 UniProt
RGD		 PMID:20501333 GO_REF:0000024 NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:96770 (PMID:17699607) RGD PMID:17699607 NCBI chr 1:264,791,335...264,984,225
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (PMID:9811866) RGD PMID:9811866 NCBI chr17:24,230,064...24,253,219
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
IEA		 (PMID:18498113)
GO_REF:0000107		 RGD
Ensembl		 PMID:18498113 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:18498113)
GO_REF:0000107		 RGD
Ensembl		 PMID:18498113 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO
ISS		 (PMID:12651933)
GO_REF:0000024
(PMID:18498113)		 RGD
AgBase		 PMID:12651933 PMID:18498113 GO_REF:0000024 NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO
IEA		 MGI:3526866 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 2:152,063,769...152,090,414
Ensembl chr 2:149,753,682...149,780,327 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:3044412 (PMID:20574024), (PMID:20691403) RGD PMID:20574024 PMID:20691403 NCBI chr 9:99,822,242...99,866,722
Ensembl chr 9:92,374,574...92,419,222 		JBrowse link
G Zfp950 zinc finger protein 950 acts_upstream_of_or_within ISO
IEA		 MGI:3526859 (PMID:17143286)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 1:270,234,263...270,251,254
Ensembl chr 1:260,236,599...260,265,254 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        face development 62
          face morphogenesis 40
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        head development 965
          face development 62
            face morphogenesis 40
paths to the root