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ONTOLOGY REPORT - ANNOTATIONS

Term:ciliary membrane
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Accession:GO:0060170 term browser browse the term
Definition:The portion of the plasma membrane surrounding a cilium.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: cilial membrane;   cilium membrane
 narrow_synonym: flagellar membrane;   flagellum membrane
 alt_id: GO:0020017


show annotations for term's descendants           Sort by:
ciliary membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 located_in IEA
ISO		 GO_REF:0000107
(PMID:28053034)		 Ensembl
RGD		 PMID:28053034 GO_REF:0000107 NCBI chr 6:27,100,089...27,203,686
Ensembl chr 6:27,124,828...27,203,686 		JBrowse link
G Arl13a ARF like GTPase 13A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:97,380,370...97,406,704
Ensembl chr  X:97,380,390...97,406,702 		JBrowse link
G Arl13b ARF like GTPase 13B is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:21976698), (PMID:23817546), (PMID:27727273), (PMID:29038301)		 GO_Central
RGD		 PMID:21976698 PMID:23817546 PMID:27727273 PMID:29038301 GO_REF:0000033 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
G Bbip1 BBSome interacting protein 1 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 1:252,943,589...252,959,512
Ensembl chr 1:252,945,557...252,959,352 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in IEA
ISO		 GO_REF:0000044
(PMID:19081074)		 UniProt
RGD		 PMID:19081074 GO_REF:0000044 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO (PMID:17574030), (PMID:19081074) RGD PMID:17574030 PMID:19081074 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 3:54,410,429...54,431,831
Ensembl chr 3:54,410,775...54,431,829 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396 		JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 8:21,013,865...21,437,934
Ensembl chr 8:21,013,944...21,437,930 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase located_in IDA PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694 		JBrowse link
G Cd24 CD24 molecule located_in ISO (PMID:11978835) RGD PMID:11978835 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 located_in ISO (PMID:22179047) RGD PMID:22179047 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992 		JBrowse link
G Cltb clathrin, light chain B located_in ISO (PMID:20427320) RGD PMID:20427320 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169 		JBrowse link
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in ISO (PMID:28053034) RGD PMID:28053034 NCBI chr  X:149,696,999...149,715,051
Ensembl chr  X:149,696,997...149,715,051 		JBrowse link
G Drd1 dopamine receptor D1 located_in ISO
IEA		 (PMID:20531939)
GO_REF:0000044		 RGD
UniProt		 PMID:20531939 GO_REF:0000044 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd2 dopamine receptor D2 located_in ISO (PMID:20531939) RGD PMID:20531939 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Drd5 dopamine receptor D5 located_in ISO
IEA		 (PMID:20531939)
GO_REF:0000107		 RGD
Ensembl		 PMID:20531939 GO_REF:0000107 NCBI chr14:72,487,950...72,491,050
Ensembl chr14:72,489,347...72,490,774 		JBrowse link
G Efcab7 EF-hand calcium binding domain 7 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:24582806)		 GO_Central
RGD		 PMID:24582806 GO_REF:0000033 NCBI chr 5:114,525,403...114,576,130
Ensembl chr 5:114,525,167...114,576,129 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 located_in ISO (PMID:20427320) RGD PMID:20427320 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G Evc EvC ciliary complex subunit 1 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:24582806)		 GO_Central
RGD		 PMID:24582806 GO_REF:0000033 NCBI chr14:73,456,181...73,498,955
Ensembl chr14:73,456,222...73,498,099 		JBrowse link
G Evc2 EvC ciliary complex subunit 2 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:24582806)		 GO_Central
RGD		 PMID:24582806 GO_REF:0000033 NCBI chr14:73,366,832...73,454,539
Ensembl chr14:73,367,963...73,454,516 		JBrowse link
G Ffar4 free fatty acid receptor 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:235,873,576...235,891,597
Ensembl chr 1:235,873,576...235,891,597 		JBrowse link
G Gpi glucose-6-phosphate isomerase located_in ISO (PMID:22179047) RGD PMID:22179047 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086 		JBrowse link
G Gpr157 G protein-coupled receptor 157 located_in ISS
ISO		 GO_REF:0000024
(PMID:27142930)		 UniProt
RGD		 PMID:27142930 GO_REF:0000024 NCBI chr 5:160,550,703...160,566,432
Ensembl chr 5:160,550,713...160,566,432 		JBrowse link
G Gpr161 G protein-coupled receptor 161 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:77,578,257...77,623,661
Ensembl chr13:77,577,739...77,619,613 		JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421 		JBrowse link
G Gpr88 G-protein coupled receptor 88 located_in ISS
ISO		 GO_REF:0000024
(PMID:23936473)		 UniProt
RGD		 PMID:23936473 GO_REF:0000024 NCBI chr 2:204,191,443...204,199,576
Ensembl chr 2:204,191,427...204,199,733 		JBrowse link
G Gucy2d guanylate cyclase 2D located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:152,739,775...152,774,474
Ensembl chr 1:152,739,775...152,774,473 		JBrowse link
G Iqce IQ motif containing E located_in ISO (PMID:24582806) RGD PMID:24582806 NCBI chr12:13,943,290...13,982,708
Ensembl chr12:13,943,487...13,982,693 		JBrowse link
G Mchr1 melanin-concentrating hormone receptor 1 located_in ISO (PMID:22139371) RGD PMID:22139371 NCBI chr 7:112,761,554...112,764,746
Ensembl chr 7:112,761,554...112,764,032 		JBrowse link
G Micall1 MICAL-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:110,676,706...110,707,171
Ensembl chr 7:110,676,775...110,707,177 		JBrowse link
G Mosmo modulator of smoothened located_in
is_active_in		 ISO
IBA		 (PMID:29290584)
GO_REF:0000033		 RGD
GO_Central		 PMID:29290584 GO_REF:0000033 NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334 		JBrowse link
G Mxra8 matrix remodeling associated 8 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:166,448,919...166,453,645
Ensembl chr 5:166,449,154...166,453,636 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting located_in ISO (PMID:38247840) RGD PMID:38247840 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:27760766) RGD PMID:27760766 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:243,032,891...243,070,031
Ensembl chr 1:243,032,913...243,070,031 		JBrowse link
G Prom2 prominin 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:114,747,654...114,761,787
Ensembl chr 3:114,747,654...114,761,787 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in IEA
ISO		 GO_REF:0000107
(PMID:29038301)		 Ensembl
RGD		 PMID:29038301 GO_REF:0000107 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha located_in ISO
IEA
ISS		 (PMID:22207244)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22207244 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:158,122,962...158,146,184
Ensembl chr 4:158,122,962...158,146,181 		JBrowse link
G Septin2 septin 2 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20558667)
GO_REF:0000044		 UniProt
RGD		 PMID:20558667 GO_REF:0000024 GO_REF:0000044 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 part_of
located_in		 IDA PMID:18596612 CACAO
BHF-UCL		 PMID:18596612 PMID:18596612 RGD:8554451, RGD:8554451 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 located_in
part_of		 IDA PMID:18596612 BHF-UCL
CACAO		 PMID:18596612 PMID:18596612 RGD:8554451, RGD:8554451 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA
ISO		 GO_REF:0000107
(PMID:22179047)		 Ensembl
RGD		 PMID:22179047 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Sstr3 somatostatin receptor 3 located_in ISO (PMID:22179047) RGD PMID:22179047 NCBI chr 7:110,092,563...110,109,043
Ensembl chr 7:110,092,575...110,099,769 		JBrowse link
G Tas2r108 taste receptor, type 2, member 108 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:69,287,667...69,288,581
Ensembl chr 4:69,287,667...69,288,581 		JBrowse link
G Tmem17 transmembrane protein 17 located_in ISS
ISO		 GO_REF:0000024
(PMID:22179047)		 UniProt
RGD		 PMID:22179047 GO_REF:0000024 NCBI chr14:96,483,648...96,524,238
Ensembl chr14:96,518,793...96,524,233 		JBrowse link
G Tmem231 transmembrane protein 231 located_in
is_active_in		 ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:22179047)
GO_REF:0000033
GO_REF:0000044		 UniProt
RGD
GO_Central		 PMID:22179047 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269 		JBrowse link
G Tmem67 transmembrane protein 67 located_in ISO
IEA		 (PMID:17185389)
GO_REF:0000107		 RGD
Ensembl		 PMID:17185389 GO_REF:0000107 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334 		JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats located_in ISO (PMID:22678063) RGD PMID:22678063 NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
G Txndc15 thioredoxin domain containing 15 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:8,898,074...8,910,538
Ensembl chr17:8,845,084...8,910,539
Ensembl chr 7:8,845,084...8,910,539 		JBrowse link
G Umod uromodulin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302 		JBrowse link
ciliary necklace term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 IDA MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chr 6:27,100,089...27,203,686
Ensembl chr 6:27,124,828...27,203,686 		JBrowse link
G Gnal G protein subunit alpha L IDA MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chr18:60,622,311...60,762,599
Ensembl chr18:60,622,311...60,762,599 		JBrowse link
ciliary pocket membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd1 EH-domain containing 1 located_in ISO
ISS		 (PMID:25686250)
GO_REF:0000024		 RGD
UniProt		 PMID:25686250 GO_REF:0000024 NCBI chr 1:203,579,850...203,602,226
Ensembl chr 1:203,579,869...203,602,212 		JBrowse link
G Ehd3 EH-domain containing 3 located_in ISO
ISS
IEA		 (PMID:25686250)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:25686250 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,640,861...21,665,601
Ensembl chr 6:21,639,290...21,665,236 		JBrowse link
G Snap29 synaptosome associated protein 29 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25686250)		 UniProt
Ensembl
RGD		 PMID:25686250 GO_REF:0000024 GO_REF:0000107 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958 		JBrowse link
non-motile cilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in IDA
ISS
IEA
ISO		 PMID:10377344
GO_REF:0000024
GO_REF:0000107
(PMID:16980309)		 UniProt
Ensembl
RGD		 PMID:16980309 PMID:10377344 GO_REF:0000024 GO_REF:0000107, RGD:632392 NCBI chr  X:149,696,999...149,715,051
Ensembl chr  X:149,696,997...149,715,051 		JBrowse link
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 located_in IDA
ISS
IEA
ISO		 PMID:10377344
GO_REF:0000024
GO_REF:0000107
(PMID:16980309)		 UniProt
Ensembl
RGD		 PMID:16980309 PMID:10377344 GO_REF:0000024 GO_REF:0000107, RGD:632392 NCBI chr 1:159,752,357...159,756,369
Ensembl chr 1:159,752,357...159,756,375 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISS
IDA		 GO_REF:0000024
PMID:10377344		 UniProt PMID:10377344 GO_REF:0000024, RGD:632392 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin-related family member 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:18654668)		 Ensembl
RGD		 PMID:18654668 GO_REF:0000107 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:18654668)		 Ensembl
RGD		 PMID:18654668 GO_REF:0000107 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Gnb1 G protein subunit beta 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124 		JBrowse link
G Gucy2e guanylate cyclase 2E located_in IEA
ISO
IDA		 GO_REF:0000107
(PMID:21598940)
PMID:9153227		 Ensembl
RGD		 PMID:21598940 PMID:9153227 GO_REF:0000107, RGD:1599625 NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067 		JBrowse link
G Pde6a phosphodiesterase 6A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:54,676,863...54,748,640
Ensembl chr18:54,676,863...54,748,816 		JBrowse link
G Pde6b phosphodiesterase 6B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450 		JBrowse link
G Pde6g phosphodiesterase 6G is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:105,721,502...105,726,150
Ensembl chr10:105,721,682...105,726,719 		JBrowse link
G Pde6h phosphodiesterase 6H is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:169,857,793...169,872,969
Ensembl chr 4:169,857,812...169,872,969 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IDA RGD PMID:20089132 RGD:5131540 NCBI chr19:37,835,125...37,901,804
Ensembl chr19:37,835,125...37,905,513 		JBrowse link
G Prcd photoreceptor disc component located_in ISO (PMID:27613864)
(PMID:27509380), (PMID:27613864)		 RGD PMID:27509380 PMID:27613864 NCBI chr10:101,887,192...101,907,647 JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:18654668) RGD PMID:18654668 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Prph peripherin located_in ISO (PMID:10414956) RGD PMID:10414956 NCBI chr 7:130,218,149...130,222,136
Ensembl chr 7:130,218,357...130,222,136 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in ISO (PMID:15790565) RGD PMID:15790565 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rho rhodopsin located_in IDA
IEA
ISO
ISS		 GO_REF:0000107
(PMID:19934218)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19934218 PMID:2209754 GO_REF:0000024 GO_REF:0000107, RGD:6893561 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (PMID:18654668) RGD PMID:18654668 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      membrane 10474
        organelle membrane 3337
          bounding membrane of organelle 1786
            ciliary membrane 74
              ciliary necklace 2
              ciliary pocket membrane 3
              cone photoreceptor disc membrane 0
              non-motile cilium membrane 3
              photoreceptor outer segment membrane 15
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      cell periphery 7083
        plasma membrane 6601
          plasma membrane region 1484
            cell projection membrane 381
              ciliary membrane 74
                ciliary necklace 2
                ciliary pocket membrane 3
                cone photoreceptor disc membrane 0
                non-motile cilium membrane 3
                photoreceptor outer segment membrane 15
paths to the root