ONTOLOGY REPORT - ANNOTATIONS
Term: retina development in camera-type eye
Accession: GO:0060041
browse the term
Definition: The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.
Synonyms: exact_synonym: retina development in camera-style eye
related_synonym: retinal development
alt_id: GO:0002073
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ACHE
acetylcholinesterase (Yt blood group)
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15579149)
Ensembl MGI
PMID:15579149
GO_REF:0000107
NCBI chr 7:92,915,065...92,922,079
Ensembl chr 7:106,311,944...106,318,184
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ACTB
actin beta
ISO
RGD
PMID:22916200
RGD:9587758
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AHI1
Abelson helper integration site 1
acts_upstream_of_or_within
ISO
(PMID:20592197)
MGI
PMID:20592197
NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232
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ALMS1
ALMS1 centrosome and basal body associated protein
acts_upstream_of_or_within
ISO
(PMID:31302159)
MGI
PMID:31302159
NCBI chr2A:73,438,657...73,671,313
Ensembl chr2A:74,926,650...75,152,139
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APC
APC regulator of WNT signaling pathway
acts_upstream_of_or_within
ISO
(PMID:10982921)
MGI
PMID:10982921
NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709
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ARSG
arylsulfatase G
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:26975023)
MGI Ensembl
PMID:26975023
GO_REF:0000107
NCBI chr17:62,195,977...62,379,362
Ensembl chr17:67,588,347...67,768,454
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BAX
BCL2 associated X, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9699561)
Ensembl MGI
PMID:9699561
GO_REF:0000107
NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
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BBS1
Bardet-Biedl syndrome 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:31302159)
MGI Ensembl
PMID:31302159
GO_REF:0000107
NCBI chr11:61,868,257...61,892,473
Ensembl chr11:65,192,355...65,216,274
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BBS10
Bardet-Biedl syndrome 10
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:31302159), (PMID:36125046), (PMID:36700052)
MGI Ensembl
PMID:31302159 PMID:36125046 PMID:36700052
GO_REF:0000107
NCBI chr12:73,862,775...73,867,377
Ensembl chr12:76,713,028...76,716,956
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BMP4
bone morphogenetic protein 4
ISO
RGD
PMID:17069773
RGD:2289001
NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
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BMPR1B
bone morphogenetic protein receptor type 1B
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12654290)
Ensembl MGI
PMID:12654290
GO_REF:0000107
NCBI chr 4:87,125,911...87,523,084
Ensembl chr 4:98,088,072...98,195,848
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BMPR2
bone morphogenetic protein receptor type 2
ISO
RGD
PMID:10482474
RGD:5129487
NCBI chr2B:89,631,622...89,823,438
Ensembl chr2B:207,780,741...207,961,072
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C3
complement C3
acts_upstream_of_or_within
ISO
(PMID:28057640)
MGI
PMID:28057640
NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
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CACNA1F
calcium voltage-gated channel subunit alpha1 F
acts_upstream_of_or_within
ISO
(PMID:21052544)
MGI
PMID:21052544
NCBI chr X:41,504,804...41,533,501
Ensembl chr X:49,356,994...49,385,678
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CALB1
calbindin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
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CEP290
centrosomal protein 290
acts_upstream_of_or_within
ISO
(PMID:21052544), (PMID:31302159)
MGI
PMID:21052544 PMID:31302159
NCBI chr12:85,589,911...85,683,365
Ensembl chr12:88,896,146...88,988,044
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CFD
complement factor D
acts_upstream_of_or_within
ISO
(PMID:28057640)
MGI
PMID:28057640
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CFH
complement factor H
acts_upstream_of_or_within acts_upstream_of_or_within_positive_effect
ISO
(PMID:17921253), (PMID:28057640) (PMID:30705315) (PMID:28057640)
MGI
PMID:17921253 PMID:28057640 PMID:30705315
NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
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CHD7
chromodomain helicase DNA binding protein 7
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186
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CLCN2
chloride voltage-gated channel 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 3:181,383,608...181,399,200
Ensembl chr 3:189,862,489...189,881,049
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CLN8
CLN8 transmembrane ER and ERGIC protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15565184) (PMID:21052544)
Ensembl MGI
PMID:15565184 PMID:21052544
GO_REF:0000107
NCBI chr 8:5,587,875...5,606,883
Ensembl chr 8:1,658,694...1,700,754
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CNGA3
cyclic nucleotide gated channel subunit alpha 3
acts_upstream_of_or_within
ISO
(PMID:21124780)
MGI
PMID:21124780
NCBI chr2A:100,911,053...100,962,278
Ensembl chr2A:99,259,808...99,308,517
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CRB1
crumbs cell polarity complex component 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22447858), (PMID:25147295)
Ensembl MGI
PMID:22447858 PMID:25147295
GO_REF:0000107
NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867
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CRX
cone-rod homeobox
acts_upstream_of_or_within
ISO
(PMID:21052544)
MGI
PMID:21052544
NCBI chr19:44,828,119...44,856,284
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DCLK1
doublecortin like kinase 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr13:16,988,340...17,342,911
Ensembl chr13:35,425,382...35,768,935
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DCX
doublecortin
involved_in
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chr X:100,411,871...100,529,833
Ensembl chr X:110,875,032...110,988,582
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DLL1
delta like canonical Notch ligand 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
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DRAM2
DNA damage regulated autophagy modulator 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:37691820)
MGI Ensembl
PMID:37691820
GO_REF:0000107
NCBI chr 1:113,763,013...113,786,070
Ensembl chr 1:126,569,722...126,583,883
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DRD4
dopamine receptor D4
ISO
RGD
PMID:18778704
RGD:7175073
NCBI chr11:640,401...646,775
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DTNBP1
dystrobrevin binding protein 1
ISO
RGD
PMID:23954924
RGD:11251759
NCBI chr 6:15,377,263...15,523,317
Ensembl chr 6:15,741,698...15,887,256
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ELP6
elongator acetyltransferase complex subunit 6
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:27715390)
MGI Ensembl
PMID:27715390
GO_REF:0000107
NCBI chr 3:47,392,777...47,415,830
Ensembl chr 3:48,496,874...48,515,090
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GDNF
glial cell derived neurotrophic factor
ISO
RGD
PMID:16650834
RGD:2324945
NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
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GNAT1
G protein subunit alpha transducin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544) (PMID:21124780)
Ensembl MGI
PMID:21052544 PMID:21124780
GO_REF:0000107
NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
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GNB1
G protein subunit beta 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 1:490,415...596,826
Ensembl chr 1:1,647,340...1,701,614
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GRM6
glutamate metabotropic receptor 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 5:174,142,754...174,156,294
Ensembl chr 5:181,434,031...181,447,341
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GRN
granulin precursor
acts_upstream_of_or_within
ISO
(PMID:28728022)
MGI
PMID:28728022
NCBI chr17:13,046,329...13,054,236
Ensembl chr17:13,211,784...13,219,609
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HPCA
hippocalcin
ISO
RGD
PMID:7789406
RGD:9686441
NCBI chr 1:32,176,465...32,185,133
Ensembl chr 1:33,363,673...33,371,524
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HPS1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1
acts_upstream_of_or_within
ISO
(PMID:21052544)
MGI
PMID:21052544
NCBI chr10:95,030,626...95,061,415
Ensembl chr10:98,526,113...98,552,922
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IL4
interleukin 4
ISO
RGD
PMID:23070471
RGD:7829830
NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581
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IMPDH1
inosine monophosphate dehydrogenase 1
ISO
RGD
PMID:18295529
RGD:5144133
NCBI chr 7:120,382,719...120,400,417
Ensembl chr 7:133,036,328...133,053,580
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IMPDH2
inosine monophosphate dehydrogenase 2
ISO
RGD
PMID:18295529
RGD:5144133
NCBI chr 3:48,948,965...48,954,276
Ensembl chr 3:50,030,303...50,035,676
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JMJD6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15345036)
Ensembl MGI
PMID:15345036
GO_REF:0000107
NCBI chr17:70,789,922...70,803,791
Ensembl chr17:76,356,142...76,370,117
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LAMA1
laminin subunit alpha 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr18:7,159,568...7,335,363
Ensembl chr18:9,482,895...9,656,800
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LAMB2
laminin subunit beta 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19907020)
Ensembl MGI
PMID:19907020
GO_REF:0000107
NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074
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LAMC3
laminin subunit gamma 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19907020)
Ensembl MGI
PMID:19907020
GO_REF:0000107
NCBI chr 9:102,131,594...102,213,829
Ensembl chr 9:130,777,182...130,861,292
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LARGE1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:16111892)
MGI
PMID:16111892
NCBI chr22:14,077,463...14,929,250
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LHX1
LIM homeobox 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
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LHX2
LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19146846)
Ensembl MGI
PMID:19146846
GO_REF:0000107
NCBI chr 9:95,132,445...95,154,130
Ensembl chr 9:123,655,845...123,676,796
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LIF
LIF interleukin 6 family cytokine
ISO
RGD
PMID:16643897
RGD:2326157
NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608
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LPCAT1
lysophosphatidylcholine acyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
Ensembl chr 5:1,503,853...1,544,741
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MAX
MYC associated factor X
ISO
RGD
PMID:14603520
RGD:2316820
NCBI chr14:45,588,366...45,683,828
Ensembl chr14:64,535,120...64,562,671
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MDM1
Mdm1 nuclear protein
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:21052544)
MGI TreeGrafter
PMID:21052544
GO_REF:0000118
NCBI chr12:65,803,548...65,841,404
Ensembl chr12:68,588,541...68,626,326
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MERTK
MER proto-oncogene, tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr2A:89,977,226...90,109,970
Ensembl chr2A:113,056,852...113,162,052
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MFRP
membrane frizzled-related protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr11:114,179,998...114,187,716
Ensembl chr11:118,107,317...118,115,050
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MFSD8
major facilitator superfamily domain containing 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:27654426)
MGI Ensembl
PMID:27654426
GO_REF:0000107
NCBI chr 4:120,087,477...120,137,550
Ensembl chr 4:131,391,361...131,439,590
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MUSK
muscle associated receptor tyrosine kinase
ISO
RGD
PMID:16899069
RGD:2317091
NCBI chr 9:81,814,766...81,947,341
Ensembl chr 9:109,980,748...110,107,480
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MYH10
myosin heavy chain 10
acts_upstream_of_or_within
ISO
(PMID:11283949), (PMID:9356462)
MGI
PMID:9356462 PMID:11283949
NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192
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NAGLU
N-acetyl-alpha-glucosaminidase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:26607664)
Ensembl MGI
PMID:26607664
GO_REF:0000107
NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
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NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9071226)
Ensembl MGI
PMID:9071226
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
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NECTIN1
nectin cell adhesion molecule 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15728677)
Ensembl MGI
PMID:15728677
GO_REF:0000107
NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090
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NEUROD4
neuronal differentiation 4
ISO
RGD
PMID:15345241
RGD:2311603
NCBI chr12:33,719,986...33,730,012
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NFIA
nuclear factor I A
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:31128945)
Ensembl MGI
PMID:31128945
GO_REF:0000107
NCBI chr 1:60,331,945...60,713,729
Ensembl chr 1:61,938,945...62,526,753
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NFIB
nuclear factor I B
acts_upstream_of_or_within
ISO
(PMID:31128945)
MGI
PMID:31128945
NCBI chr 9:13,923,516...14,376,264
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NFIX
nuclear factor I X
acts_upstream_of_or_within
ISO
(PMID:31128945)
MGI
PMID:31128945
NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406
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NOS3
nitric oxide synthase 3
ISO
RGD
PMID:16639026
RGD:7771562
NCBI chr 7:142,577,334...142,600,702
Ensembl chr 7:154,730,009...154,755,233
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NPHP1
nephrocystin 1
involved_in
ISO
(PMID:19208653)
UniProt
PMID:19208653
NCBI chr2A:91,520,612...91,602,187
Ensembl chr2A:111,625,267...111,706,205
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NPHP4
nephrocystin 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 1:4,620,593...4,756,363
Ensembl chr 1:5,878,739...6,012,864
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NR2E1
nuclear receptor subfamily 2 group E member 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11997145) (PMID:16702404)
Ensembl MGI
PMID:11997145 PMID:16702404
GO_REF:0000107
NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436
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NR2E3
nuclear receptor subfamily 2 group E member 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12407160) (PMID:21052544)
Ensembl MGI
PMID:12407160 PMID:21052544
GO_REF:0000107
NCBI chr15:50,759,707...50,767,703
Ensembl chr15:69,525,351...69,533,034
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NR4A2
nuclear receptor subfamily 4 group A member 2
ISO
RGD
PMID:22714110
RGD:124713571
NCBI chr2B:43,584,835...43,593,118
Ensembl chr2B:160,826,091...160,837,162
G
NTRK2
neurotrophic receptor tyrosine kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25542970)
Ensembl MGI
PMID:25542970
GO_REF:0000107
NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
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OPA1
OPA1 mitochondrial dynamin like GTPase
ISO
RGD
PMID:15505078
RGD:1547836
NCBI chr 3:190,890,242...190,995,133
Ensembl chr 3:201,207,607...201,312,358
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OPN4
opsin 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21124780)
Ensembl MGI
PMID:21124780
GO_REF:0000107
NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143
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PAX4
paired box 4
ISO
RGD
PMID:19012751
RGD:2311636
NCBI chr 7:119,605,924...119,613,579
Ensembl chr 7:132,260,859...132,268,516
G
PAX6
paired box 6
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19146846)
RGD MGI Ensembl
PMID:19012751 PMID:19146846
GO_REF:0000107 RGD:2311636
NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474
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PDE6A
phosphodiesterase 6A
acts_upstream_of_or_within
ISO
(PMID:21052544)
MGI
PMID:21052544
NCBI chr 5:145,283,505...145,369,596
Ensembl chr 5:151,294,041...151,375,832
G
PDE6B
phosphodiesterase 6B
acts_upstream_of_or_within
ISO
(PMID:21052544)
MGI
PMID:21052544
Ensembl chr 4:646,516...701,680
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PDGFB
platelet derived growth factor subunit B
acts_upstream_of_or_within
ISO
(PMID:25224828)
MGI
PMID:25224828
NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
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PFDN5
prefoldin subunit 5
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:21052544)
MGI Ensembl
PMID:21052544
GO_REF:0000107
NCBI chr12:35,454,680...35,458,667
Ensembl chr12:36,235,552...36,239,706
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POU4F2
POU class 4 homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9630743) (PMID:8637595)
Ensembl MGI
PMID:8637595 PMID:9630743
GO_REF:0000107
NCBI chr 4:138,969,157...138,972,730
Ensembl chr 4:150,626,392...150,629,961
G
PRPH2
peripherin 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15964665) (PMID:28053051) (PMID:21052544)
Ensembl MGI
PMID:15964665 PMID:21052544 PMID:28053051
GO_REF:0000107
NCBI chr 6:42,284,818...42,316,150
Ensembl chr 6:43,582,317...43,608,011
G
PTN
pleiotrophin
ISO
RGD
PMID:8453763 PMID:16914133
RGD:9831439 RGD:9831456
NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
G
RBP4
retinol binding protein 4
acts_upstream_of_or_within
ISO
(PMID:11562477)
MGI
PMID:11562477
NCBI chr10:90,337,879...90,347,530
Ensembl chr10:93,848,166...93,857,887
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RD3
RD3 regulator of GUCY2D
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl TreeGrafter MGI
PMID:21052544
GO_REF:0000107 GO_REF:0000118
NCBI chr 1:187,044,054...187,060,441
Ensembl chr 1:191,907,989...191,924,365
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RET
ret proto-oncogene
ISO
RGD
PMID:16650834
RGD:2324945
NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331
G
RHO
rhodopsin
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
G
RNPEP
arginyl aminopeptidase
ISO
RGD
PMID:15500823
RGD:2325937
NCBI chr 1:177,579,349...177,602,865
Ensembl chr 1:181,880,404...181,903,906
G
ROM1
retinal outer segment membrane protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:28053051)
Ensembl MGI
PMID:28053051
GO_REF:0000107
NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278
G
RORB
RAR related orphan receptor B
involved_in
ISO
(PMID:23652001)
UniProt
PMID:23652001
NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030
G
RP1
RP1 axonemal microtubule associated
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl TreeGrafter MGI
PMID:21052544
GO_REF:0000107 GO_REF:0000118
NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879 Ensembl chr 8:48,419,033...48,583,879
G
RPGRIP1
RPGR interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr14:2,105,703...2,169,362
Ensembl chr14:20,185,236...20,247,064
G
RPL24
ribosomal protein L24
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10049578), (PMID:9331275)
Ensembl MGI
PMID:9331275 PMID:10049578
GO_REF:0000107
NCBI chr 3:98,769,830...98,775,532
Ensembl chr 3:105,449,515...105,455,135
G
RRM1
ribonucleotide reductase catalytic subunit M1
ISO
RGD
PMID:2647502
RGD:5133699
NCBI chr11:3,956,528...3,999,205
Ensembl chr11:4,068,119...4,110,474
G
SCAPER
S-phase cyclin A associated protein in the ER
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:28794130)
MGI Ensembl
PMID:28794130
GO_REF:0000107
NCBI chr15:55,263,970...55,830,877
Ensembl chr15:74,855,612...75,377,042
G
SERPINF1
serpin family F member 1
ISO
RGD
PMID:21738387
RGD:8655555
NCBI chr17:1,745,597...1,761,399
Ensembl chr17:1,638,556...1,653,568
G
SKI
SKI proto-oncogene
acts_upstream_of_or_within
ISO
(PMID:17003410)
MGI
PMID:17003410
NCBI chr 1:944,428...1,029,695
Ensembl chr 1:2,091,620...2,174,080
G
SLC1A1
solute carrier family 1 member 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:4,323,124...4,420,193
Ensembl chr 9:4,511,491...4,608,337
G
SLC38A8
solute carrier family 38 member 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:37862028)
MGI Ensembl
PMID:37862028
GO_REF:0000107
NCBI chr16:64,676,787...64,709,083
Ensembl chr16:84,020,458...84,053,458
G
SLC4A5
solute carrier family 4 member 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21705333)
Ensembl MGI
PMID:21705333
GO_REF:0000107
NCBI chr2A:74,288,481...74,428,014
Ensembl chr2A:75,798,510...75,888,448
G
SOX8
SRY-box transcription factor 8
acts_upstream_of_or_within
ISO
(PMID:19490914)
MGI
PMID:19490914
G
SOX9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:19490914)
MGI
PMID:19490914
NCBI chr17:66,028,737...66,034,122
G
TBC1D32
TBC1 domain family member 32
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20159594)
Ensembl MGI
PMID:20159594
GO_REF:0000107
NCBI chr 6:118,884,928...119,139,138
Ensembl chr 6:123,022,008...123,273,810
G
TCIRG1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20711468)
Ensembl MGI
PMID:20711468
GO_REF:0000107
NCBI chr11:63,120,913...63,132,831
Ensembl chr11:66,429,435...66,441,327
G
TENT2
terminal nucleotidyltransferase 2
ISO
RGD
PMID:23700402
RGD:11041783
NCBI chr 5:35,622,645...35,696,451
Ensembl chr 5:35,893,841...35,966,932
G
TGIF1
TGFB induced factor homeobox 1
acts_upstream_of_or_within
ISO
(PMID:18973577)
MGI
PMID:18973577
NCBI chr18:10,819,015...10,830,282
Ensembl chr18:13,128,359...13,139,145
G
TGIF2
TGFB induced factor homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18926818)
Ensembl MGI
PMID:18926818
GO_REF:0000107
NCBI chr20:32,906,641...32,927,119
Ensembl chr20:34,028,415...34,046,354
G
TTLL5
tubulin tyrosine ligase like 5
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24791901)
MGI Ensembl
PMID:24791901
GO_REF:0000107
NCBI chr14:56,216,214...56,513,718
Ensembl chr14:75,058,897...75,356,494
G
TUB
TUB bipartite transcription factor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr11:8,135,981...8,223,414
Ensembl chr11:7,882,680...7,969,434
G
TULP1
TUB like protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 6:35,058,422...35,073,472
Ensembl chr 6:36,151,747...36,166,160
G
UCHL3
ubiquitin C-terminal hydrolase L3
acts_upstream_of_or_within
ISO
(PMID:21052544)
MGI
PMID:21052544
NCBI chr13:56,776,436...56,832,539
Ensembl chr13:75,549,647...75,878,673
G
USH2A
usherin
ISO
RGD
PMID:12160733
RGD:634438
NCBI chr 1:191,193,130...191,994,664
Ensembl chr 1:196,048,086...196,850,216
G
VAX2
ventral anterior homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10595508)
Ensembl MGI
PMID:10595508
GO_REF:0000107
NCBI chr2A:70,964,829...70,997,702
Ensembl chr2A:72,078,829...72,111,463
G
XRN2
5'-3' exoribonuclease 2
ISO
RGD
PMID:23700402
RGD:11041783
NCBI chr20:21,260,871...21,347,430
Ensembl chr20:21,222,138...21,308,561
G
ZNF513
zinc finger protein 513
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2A:27,381,102...27,384,980
Ensembl chr2A:27,469,512...27,473,068
G
BARHL2
BarH like homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14998930)
Ensembl MGI
PMID:14998930
GO_REF:0000107
NCBI chr 1:93,373,317...93,378,667
Ensembl chr 1:92,121,017...92,126,036
G
BHLHE22
basic helix-loop-helix family member e22
acts_upstream_of_or_within
ISO
(PMID:17092954)
MGI
PMID:17092954
NCBI chr 8:61,119,561...61,122,827
G
FOXN4
forkhead box N4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15363391)
Ensembl MGI
PMID:15363391
GO_REF:0000107
NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025
G
GDF11
growth differentiation factor 11
involved_in acts_upstream_of
IEA ISO
(PMID:15976303)
Ensembl MGI
PMID:15976303
GO_REF:0000107
NCBI chr12:33,154,530...33,168,427
Ensembl chr12:33,879,180...33,893,252
G
HES1
hes family bHLH transcription factor 1
involved_in acts_upstream_of
IEA ISO
(PMID:16038893)
Ensembl MGI
PMID:16038893
GO_REF:0000107
NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
G
IKZF1
IKAROS family zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:25654255)
MGI
PMID:25654255
NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245
G
NEUROD1
neuronal differentiation 1
involved_in
ISO
(PMID:11861467)
UniProt
PMID:11861467
NCBI chr2B:68,939,341...68,943,516
G
NEUROD4
neuronal differentiation 4
involved_in
ISO
(PMID:11861467)
UniProt
PMID:11861467
NCBI chr12:33,719,986...33,730,012
G
PTF1A
pancreas associated transcription factor 1a
acts_upstream_of_or_within involved_in
ISO
(PMID:17301087) (PMID:17075007)
MGI UniProt
PMID:17075007 PMID:17301087
NCBI chr10:23,356,165...23,359,579
G
RORB
RAR related orphan receptor B
involved_in
ISO
(PMID:23652001)
UniProt
PMID:23652001
NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030
G
TGIF1
TGFB induced factor homeobox 1
acts_upstream_of
ISO
(PMID:18973577)
MGI
PMID:18973577
NCBI chr18:10,819,015...10,830,282
Ensembl chr18:13,128,359...13,139,145
G
TGIF2
TGFB induced factor homeobox 2
involved_in acts_upstream_of
IEA ISO
(PMID:18926818)
Ensembl MGI
PMID:18926818
GO_REF:0000107
NCBI chr20:32,906,641...32,927,119
Ensembl chr20:34,028,415...34,046,354
G
PROM1
prominin 1
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr 4:10,405,299...10,519,518
Ensembl chr 4:15,702,159...15,815,454
G
ROM1
retinal outer segment membrane protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20300562)
Ensembl MGI
PMID:20300562
GO_REF:0000107
NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278
G
SDK2
sidekick cell adhesion molecule 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:67,261,847...67,577,568
Ensembl chr17:72,823,709...73,133,952
G
SLC4A7
solute carrier family 4 member 7
acts_upstream_of_or_within
ISO
(PMID:12808454)
MGI
PMID:12808454
NCBI chr 3:27,261,155...27,373,223
Ensembl chr 3:27,591,639...27,670,815
G
TTC8
tetratricopeptide repeat domain 8
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21646512)
Ensembl MGI
PMID:21646512
GO_REF:0000107
NCBI chr14:69,446,355...69,502,351
Ensembl chr14:88,802,812...88,857,055
G
IHH
Indian hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18582859)
Ensembl MGI
PMID:18582859
GO_REF:0000107
NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506
G
BBS10
Bardet-Biedl syndrome 10
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:36125046)
MGI Ensembl
PMID:36125046
GO_REF:0000107
NCBI chr12:73,862,775...73,867,377
Ensembl chr12:76,713,028...76,716,956
G
GNAT2
G protein subunit alpha transducin 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23580486) (PMID:29518352)
Ensembl MGI
PMID:23580486 PMID:29518352
GO_REF:0000107
NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
G
NAGLU
N-acetyl-alpha-glucosaminidase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:26607664)
Ensembl MGI
PMID:26607664
GO_REF:0000107
NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9071226)
Ensembl MGI
PMID:9071226
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
CDON
cell adhesion associated, oncogene regulated
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19754878)
Ensembl MGI
PMID:19754878
GO_REF:0000107
NCBI chr11:120,772,160...120,877,529
Ensembl chr11:124,685,084...124,786,091
G
HIPK1
homeodomain interacting protein kinase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:88,579,603...88,627,988
Ensembl chr 1:123,633,134...123,677,714
G
HIPK2
homeodomain interacting protein kinase 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:131,506,711...131,722,943
G
LHX1
LIM homeobox 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
G
LRP6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
(PMID:19653321)
MGI
PMID:19653321
NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973
G
PROX1
prospero homeobox 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
G
RBP4
retinol binding protein 4
involved_in
ISO
(PMID:10469643)
BHF-UCL
PMID:10469643
NCBI chr10:90,337,879...90,347,530
Ensembl chr10:93,848,166...93,857,887
G
CASZ1
castor zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:25654255)
MGI
PMID:25654255
NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091
G
GDF11
growth differentiation factor 11
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15976303)
Ensembl MGI
PMID:15976303
GO_REF:0000107
NCBI chr12:33,154,530...33,168,427
Ensembl chr12:33,879,180...33,893,252
G
HES1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16038893)
Ensembl MGI
PMID:16038893
GO_REF:0000107
NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
G
POU4F2
POU class 4 homeobox 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:138,969,157...138,972,730
Ensembl chr 4:150,626,392...150,629,961
G
CASZ1
castor zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:25654255)
MGI
PMID:25654255
NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091
G
ACTL6A
actin like 6A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:176,595,149...176,620,556
Ensembl chr 3:184,765,523...184,790,983
G
ATOH7
atonal bHLH transcription factor 7
acts_upstream_of_or_within
ISO
(PMID:21441919)
MGI
PMID:21441919
NCBI chr10:64,714,546...64,716,341
G
ATP2B1
ATPase plasma membrane Ca2+ transporting 1
ISO
RGD
PMID:16079002
RGD:2317729
NCBI chr12:87,107,900...87,229,514
Ensembl chr12:90,427,560...90,495,320
G
ATP2B2
ATPase plasma membrane Ca2+ transporting 2
ISO
RGD
PMID:16079002
RGD:2317729
NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006
G
ATP2B3
ATPase plasma membrane Ca2+ transporting 3
ISO
RGD
PMID:16079002
RGD:2317729
NCBI chr X:143,068,171...143,133,479
Ensembl chr X:152,955,109...153,019,445
G
ATP2B4
ATPase plasma membrane Ca2+ transporting 4
ISO
RGD
PMID:16079002
RGD:2317729
NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882
G
BSG
basigin (Ok blood group)
involved_in
ISO
(PMID:10967074), (PMID:11273674), (PMID:11853760)
UniProt
PMID:10967074 PMID:11273674 PMID:11853760
Ensembl chr19:539,815...551,456
G
CASP2
caspase 2
ISO
RGD
PMID:9809666
RGD:4107085
NCBI chr 7:135,283,072...135,307,855
Ensembl chr 7:147,773,749...147,792,958
G
FOS
Fos proto-oncogene, AP-1 transcription factor subunit
ISO
RGD
PMID:20589906
RGD:405650605
NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766
G
GPM6A
glycoprotein M6A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:167,826,285...168,194,244
Ensembl chr 4:180,059,938...180,428,459
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15716406)
Ensembl MGI
PMID:15716406
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
OPTN
optineurin
ISO
RGD
PMID:17687037
RGD:7800681
NCBI chr10:13,104,335...13,142,725
Ensembl chr10:13,077,345...13,115,773
G
PER1
period circadian regulator 1
ISO
RGD
PMID:20589906
RGD:405650605
NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
G
PER2
period circadian regulator 2
ISO
RGD
PMID:20589906
RGD:405650605
NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
G
PSEN1
presenilin 1
ISO
RGD
PMID:12401445
RGD:729595
NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
G
RAB11FIP4
RAB11 family interacting protein 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:25,265,176...25,411,124
Ensembl chr17:26,006,251...26,146,947
G
RPE65
retinoid isomerohydrolase RPE65
ISO
RGD
PMID:2631392
RGD:9585660
NCBI chr 1:67,666,784...67,687,891
Ensembl chr 1:69,623,775...69,644,904
G
SLC17A6
solute carrier family 17 member 6
ISO
RGD
PMID:18482716
RGD:9999162
NCBI chr11:22,350,537...22,392,009
Ensembl chr11:22,258,011...22,301,944
G
SLC17A7
solute carrier family 17 member 7
ISO
RGD
PMID:18482716
RGD:9999162
NCBI chr19:46,443,076...46,455,195
Ensembl chr19:55,365,811...55,377,438
G
SLC17A8
solute carrier family 17 member 8
ISO
RGD
PMID:18482716
RGD:9999162
NCBI chr12:97,935,177...98,001,240
Ensembl chr12:101,342,113...101,405,844
G
SMARCA4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952
G
SMARCD3
SWI/SNF related BAF chromatin remodeling complex subunit D3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:142,825,864...142,864,159
Ensembl chr 7:154,977,858...155,013,681
G
TGFB2
transforming growth factor beta 2
involved_in
ISO
(PMID:9217007)
BHF-UCL
PMID:9217007
NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041
G
DLX1
distal-less homeobox 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909
G
DLX2
distal-less homeobox 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079
G
TGIF1
TGFB induced factor homeobox 1
acts_upstream_of_or_within
ISO
(PMID:18973577)
MGI
PMID:18973577
NCBI chr18:10,819,015...10,830,282
Ensembl chr18:13,128,359...13,139,145
G
TGIF2
TGFB induced factor homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18926818)
Ensembl MGI
PMID:18926818
GO_REF:0000107
NCBI chr20:32,906,641...32,927,119
Ensembl chr20:34,028,415...34,046,354
G
CRB1
crumbs cell polarity complex component 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15316081), (PMID:16885194)
Ensembl MGI
PMID:15316081 PMID:16885194
GO_REF:0000107
NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867
G
DSCAM
DS cell adhesion molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18216855)
Ensembl MGI
PMID:18216855
GO_REF:0000107
NCBI chr21:26,366,295...27,192,617
Ensembl chr21:39,699,077...40,524,164
G
GRK1
G protein-coupled receptor kinase 1
acts_upstream_of_or_within
ISO
(PMID:10097103)
MGI
PMID:10097103
NCBI chr13:94,816,045...94,838,509
Ensembl chr13:113,867,002...113,885,610
G
DLL4
delta like canonical Notch ligand 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:19,871,584...19,881,817
Ensembl chr15:38,121,574...38,129,471
G
PTF1A
pancreas associated transcription factor 1a
involved_in
ISO
(PMID:17075007)
UniProt
PMID:17075007
NCBI chr10:23,356,165...23,359,579
G
SIX3
SIX homeobox 3
involved_in
ISO
(PMID:20890044)
UniProt
PMID:20890044
NCBI chr2A:45,038,634...45,072,867
G
CELF4
CUGBP Elav-like family member 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23932931)
Ensembl MGI
PMID:23932931
GO_REF:0000107
NCBI chr18:30,495,149...30,818,358
Ensembl chr18:34,068,123...34,374,372
G
ARL6
ARF like GTPase 6
acts_upstream_of_or_within
ISO
(PMID:22139371) (PMID:20333246)
MGI
PMID:20333246 PMID:22139371
NCBI chr 3:94,832,577...94,870,531
Ensembl chr 3:101,519,718...101,556,419
G
CALB1
calbindin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:86,747,702...86,771,995
Ensembl chr 8:88,699,532...88,723,814
G
CRB1
crumbs cell polarity complex component 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17234588)
Ensembl MGI
PMID:17234588
GO_REF:0000107
NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867
G
FAT3
FAT atypical cadherin 3
acts_upstream_of_or_within
ISO
(PMID:21903076)
MGI
PMID:21903076
NCBI chr11:87,242,937...87,921,955
G
FJX1
four-jointed box kinase 1
acts_upstream_of_or_within
ISO
(PMID:21903076)
MGI
PMID:21903076
NCBI chr11:35,588,579...35,592,107
G
FOXN4
forkhead box N4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025
G
HIPK1
homeodomain interacting protein kinase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:88,579,603...88,627,988
Ensembl chr 1:123,633,134...123,677,714
G
HIPK2
homeodomain interacting protein kinase 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:131,506,711...131,722,943
G
IRX6
iroquois homeobox 6
acts_upstream_of_or_within
ISO
(PMID:23172916)
MGI
PMID:23172916
NCBI chr16:35,556,558...35,563,568
Ensembl chr16:54,662,732...54,669,745
G
LARGE1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:16111892)
MGI
PMID:16111892
NCBI chr22:14,077,463...14,929,250
G
LHX1
LIM homeobox 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
G
MEGF11
multiple EGF like domains 11
involved_in
ISO
(PMID:22407321)
UniProt
PMID:22407321
NCBI chr15:44,836,750...45,208,674
Ensembl chr15:63,116,564...63,204,508
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:29654250)
Ensembl MGI
PMID:29654250
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
PROM1
prominin 1
involved_in
ISO
(PMID:19228982)
UniProt
PMID:19228982
NCBI chr 4:10,405,299...10,519,518
Ensembl chr 4:15,702,159...15,815,454
G
PTF1A
pancreas associated transcription factor 1a
involved_in
ISO
(PMID:17075007)
UniProt
PMID:17075007
NCBI chr10:23,356,165...23,359,579
G
PTPRM
protein tyrosine phosphatase receptor type M
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:5,879,556...6,706,824
Ensembl chr18:8,206,677...9,030,286
G
RDH13
retinol dehydrogenase 13
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22605914)
Ensembl MGI
PMID:22605914
GO_REF:0000107
NCBI chr19:52,081,674...52,107,781
Ensembl chr19:60,776,114...60,794,267
G
RS1
retinoschisin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11983912) (PMID:15326152)
Ensembl MGI
PMID:11983912 PMID:15326152
GO_REF:0000107
NCBI chr X:11,259,222...11,282,289
Ensembl chr X:18,624,687...18,657,315
G
SDK2
sidekick cell adhesion molecule 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:67,261,847...67,577,568
Ensembl chr17:72,823,709...73,133,952
G
SLC1A1
solute carrier family 1 member 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19766171)
Ensembl MGI
PMID:19766171
GO_REF:0000107
NCBI chr 9:4,323,124...4,420,193
Ensembl chr 9:4,511,491...4,608,337
G
TFAP2A
transcription factor AP-2 alpha
involved_in
ISO
(PMID:20607706)
UniProt
PMID:20607706
NCBI chr 6:10,237,834...10,260,843
G
TFAP2B
transcription factor AP-2 beta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:50,376,157...50,406,740
Ensembl chr 6:51,635,899...51,664,691
G
TSPAN12
tetraspanin 12
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:112,790,606...112,861,730
Ensembl chr 7:125,478,472...125,549,091
G
BHLHE22
basic helix-loop-helix family member e22
acts_upstream_of_or_within
ISO
(PMID:17092954)
MGI
PMID:17092954
NCBI chr 8:61,119,561...61,122,827
G
CRB1
crumbs cell polarity complex component 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17234588), (PMID:25147295)
Ensembl MGI
PMID:17234588 PMID:25147295
GO_REF:0000107
NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867
G
DLL1
delta like canonical Notch ligand 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
G
IMPG2
interphotoreceptor matrix proteoglycan 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:32265257)
Ensembl MGI
PMID:32265257
GO_REF:0000107
NCBI chr 3:98,325,379...98,418,344
Ensembl chr 3:105,005,553...105,097,902
G
LRP5
LDL receptor related protein 5
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
G
LRP6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
(PMID:18985738)
MGI
PMID:18985738
NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973
G
MAN2A1
mannosidase alpha class 2A member 1
acts_upstream_of_or_within
ISO
(PMID:20144606)
MGI
PMID:20144606
NCBI chr 5:105,034,104...105,219,011
Ensembl chr 5:110,841,349...111,025,187
G
MFSD2A
MFSD2 lysolipid transporter A, lysophospholipid
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:27008858)
Ensembl ARUK-UCL
PMID:27008858
GO_REF:0000107
NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15716406)
Ensembl MGI
PMID:15716406
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
NECTIN3
nectin cell adhesion molecule 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15728677)
Ensembl MGI
PMID:15728677
GO_REF:0000107
NCBI chr 3:108,223,380...108,354,079
Ensembl chr 3:115,148,481...115,270,507
G
PROM1
prominin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:10,405,299...10,519,518
Ensembl chr 4:15,702,159...15,815,454
G
PTF1A
pancreas associated transcription factor 1a
acts_upstream_of_or_within
ISO
(PMID:17301087)
MGI
PMID:17301087
NCBI chr10:23,356,165...23,359,579
G
ROM1
retinal outer segment membrane protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20300562)
Ensembl MGI
PMID:20300562
GO_REF:0000107
NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278
G
RP1
RP1 axonemal microtubule associated
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879 Ensembl chr 8:48,419,033...48,583,879
G
RPGR
retinitis pigmentosa GTPase regulator
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10725384)
MGI Ensembl
PMID:10725384
GO_REF:0000107
NCBI chr X:30,718,669...30,777,671
G
SOX2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:16651659)
MGI
PMID:16651659
NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662
G
VSX2
visual system homeobox 2
acts_upstream_of_or_within
ISO
(PMID:16854970), (PMID:8630490)
MGI
PMID:8630490 PMID:16854970
NCBI chr14:54,797,734...54,821,081
G
ACVR2B
activin A receptor type 2B
involved_in
ISO
(PMID:19903896)
BHF-UCL
PMID:19903896
NCBI chr 3:38,350,838...38,389,839
Ensembl chr 3:38,633,093...38,662,063
G
ACVRL1
activin A receptor like type 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:36,839,869...36,856,351
Ensembl chr12:37,615,888...37,631,691
G
BMPR2
bone morphogenetic protein receptor type 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2B:89,631,622...89,823,438
Ensembl chr2B:207,780,741...207,961,072
G
CYP1B1
cytochrome P450 family 1 subfamily B member 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19005183)
Ensembl MGI
PMID:19005183
GO_REF:0000107
NCBI chr2A:38,087,863...38,096,529
Ensembl chr2A:38,851,000...38,859,824
G
FZD4
frizzled class receptor 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25083995), (PMID:25414188) (PMID:23217714)
Ensembl MGI
PMID:23217714 PMID:25083995 PMID:25414188
GO_REF:0000107
NCBI chr11:81,973,680...82,007,733
Ensembl chr11:85,611,989...85,616,065
G
HIF1A
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21212189)
Ensembl MGI
PMID:21212189
GO_REF:0000107
NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
G
LARGE1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:16111892)
MGI
PMID:16111892
NCBI chr22:14,077,463...14,929,250
G
LRP5
LDL receptor related protein 5
acts_upstream_of_or_within
ISO
(PMID:22272305) (PMID:25083995)
MGI
PMID:22272305 PMID:25083995
NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23217714) (PMID:15716406), (PMID:18978344), (PMID:28575130), (PMID:29654250) (PMID:25083995), (PMID:25414188) (PMID:15716406), (PMID:29715368)
Ensembl MGI
PMID:15716406 PMID:18978344 PMID:23217714 PMID:25083995 PMID:25414188 PMID:28575130 PMID:29654250 PMID:29715368 More...
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
NRP1
neuropilin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25414188)
Ensembl MGI
PMID:25414188
GO_REF:0000107
NCBI chr10:33,298,918...33,456,466
Ensembl chr10:33,883,173...34,039,648
G
PDGFB
platelet derived growth factor subunit B
acts_upstream_of_or_within
ISO
(PMID:25224828)
MGI
PMID:25224828
NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
G
PDGFRA
platelet derived growth factor receptor alpha
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097
G
PDGFRB
platelet derived growth factor receptor beta
involved_in
ISO
(PMID:11239463) (PMID:14624252)
UniProt
PMID:11239463 PMID:14624252
NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
G
ROM1
retinal outer segment membrane protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20300562)
Ensembl MGI
PMID:20300562
GO_REF:0000107
NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278
G
TGFB1
transforming growth factor beta 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:29715368)
Ensembl MGI
PMID:29715368
GO_REF:0000107
NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
G
VSTM4
V-set and transmembrane domain containing 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:31698979)
Ensembl MGI
PMID:31698979
GO_REF:0000107
NCBI chr10:45,128,625...45,240,558
G
ARHGEF15
Rho guanine nucleotide exchange factor 15
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22535667)
Ensembl MGI
PMID:22535667
GO_REF:0000107
NCBI chr17:43,336,764...43,349,787
Ensembl chr17:48,070,223...48,082,499
G
CLIC4
chloride intracellular channel 4
acts_upstream_of_or_within
ISO
(PMID:19197003)
MGI
PMID:19197003
NCBI chr 1:23,947,030...24,042,139
Ensembl chr 1:24,975,260...25,017,904
G
FZD4
frizzled class receptor 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19837032)
Ensembl TreeGrafter MGI
PMID:19837032
GO_REF:0000107 GO_REF:0000118
NCBI chr11:81,973,680...82,007,733
Ensembl chr11:85,611,989...85,616,065
G
LRP5
LDL receptor related protein 5
acts_upstream_of_or_within
ISO
(PMID:19837032) (PMID:18263894) (PMID:11956231)
RGD MGI
PMID:11956231 PMID:18263894 PMID:19837032 PMID:32833527
RGD:40902996
NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19837032) (PMID:18978344)
Ensembl MGI
PMID:18978344 PMID:19837032
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
NRP1
neuropilin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:33,298,918...33,456,466
Ensembl chr10:33,883,173...34,039,648
G
RHOJ
ras homolog family member J
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22535667)
Ensembl MGI
PMID:22535667
GO_REF:0000107
NCBI chr14:43,783,185...43,872,000
Ensembl chr14:62,039,418...62,126,908
G
SLC4A7
solute carrier family 4 member 7
acts_upstream_of_or_within
ISO
(PMID:12808454)
MGI
PMID:12808454
NCBI chr 3:27,261,155...27,373,223
Ensembl chr 3:27,591,639...27,670,815
G
BHLHE22
basic helix-loop-helix family member e22
acts_upstream_of_or_within
ISO
(PMID:17092954)
MGI
PMID:17092954
NCBI chr 8:61,119,561...61,122,827
G
CABP4
calcium binding protein 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16249514)
Ensembl MGI
PMID:16249514
GO_REF:0000107
NCBI chr11:62,813,477...62,820,425
Ensembl chr11:66,121,992...66,128,758
G
CASZ1
castor zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:24467707)
MGI
PMID:24467707
NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091
G
IKZF1
IKAROS family zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:25654255)
MGI
PMID:25654255
NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245
G
IRX5
iroquois homeobox 5
acts_upstream_of_or_within
ISO
(PMID:18322081)
MGI
PMID:18322081
NCBI chr16:35,164,884...35,168,189
Ensembl chr16:54,272,412...54,275,124
G
IRX6
iroquois homeobox 6
acts_upstream_of_or_within
ISO
(PMID:23172916)
MGI
PMID:23172916
NCBI chr16:35,556,558...35,563,568
Ensembl chr16:54,662,732...54,669,745
G
PRDM1
PR/SET domain 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:28199486)
Ensembl MGI
PMID:28199486
GO_REF:0000107
NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815
G
VSX1
visual system homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18322081) (PMID:14745032) (PMID:15043821)
Ensembl MGI
PMID:14745032 PMID:15043821 PMID:18322081
GO_REF:0000107
NCBI chr20:25,011,149...25,025,545
Ensembl chr20:25,361,216...25,372,705
G
VSX2
visual system homeobox 2
acts_upstream_of_or_within
ISO
(PMID:8630490)
MGI
PMID:8630490
NCBI chr14:54,797,734...54,821,081
G
ZHX2
zinc fingers and homeoboxes 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:119,473,607...119,668,790
Ensembl chr 8:122,401,567...122,404,080
G
COL4A1
collagen type IV alpha 1 chain
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:91,282,617...91,440,187
Ensembl chr13:110,407,009...110,562,529
G
CYP1B1
cytochrome P450 family 1 subfamily B member 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2A:38,087,863...38,096,529
Ensembl chr2A:38,851,000...38,859,824
G
FZD4
frizzled class receptor 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:81,973,680...82,007,733
Ensembl chr11:85,611,989...85,616,065
G
LAMA1
laminin subunit alpha 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr18:7,159,568...7,335,363
Ensembl chr18:9,482,895...9,656,800
G
LRP5
LDL receptor related protein 5
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18978344), (PMID:22394677), (PMID:28575130)
Ensembl MGI
PMID:18978344 PMID:22394677 PMID:28575130
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
AHI1
Abelson helper integration site 1
involved_in
ISO
(PMID:20081859)
CACAO
PMID:20081859
NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232
G
CABP4
calcium binding protein 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16249514)
Ensembl MGI
PMID:16249514
GO_REF:0000107
NCBI chr11:62,813,477...62,820,425
Ensembl chr11:66,121,992...66,128,758
G
CNGA3
cyclic nucleotide gated channel subunit alpha 3
acts_upstream_of_or_within
ISO
(PMID:21052544)
MGI
PMID:21052544
NCBI chr2A:100,911,053...100,962,278
Ensembl chr2A:99,259,808...99,308,517
G
CRB2
crumbs cell polarity complex component 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:94,473,423...94,511,285
Ensembl chr 9:123,011,968...123,032,855
G
DIO3
iodothyronine deiodinase 3
acts_upstream_of_or_within
ISO
(PMID:20203194)
MGI
PMID:20203194
NCBI chr14:82,188,126...82,190,220
G
GNAT2
G protein subunit alpha transducin 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17065522), (PMID:21052544)
Ensembl MGI
PMID:17065522 PMID:21052544
GO_REF:0000107
NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
G
HCN1
hyperpolarization activated cyclic nucleotide gated potassium channel 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr 5:64,673,392...65,116,259
Ensembl chr 5:69,724,767...70,158,761
G
PDE6C
phosphodiesterase 6C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21052544)
Ensembl MGI
PMID:21052544
GO_REF:0000107
NCBI chr10:90,361,003...90,414,169
Ensembl chr10:93,871,704...93,924,654
G
RORB
RAR related orphan receptor B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030
G
RP1
RP1 axonemal microtubule associated
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879 Ensembl chr 8:48,419,033...48,583,879
G
THRB
thyroid hormone receptor beta
involved_in acts_upstream_of
IEA ISO
(PMID:20203194)
Ensembl MGI
PMID:20203194
GO_REF:0000107
NCBI chr 3:24,024,025...24,401,024
Ensembl chr 3:24,346,824...24,564,960
G
THY1
Thy-1 cell surface antigen
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:114,253,535...114,259,495
Ensembl chr11:118,180,717...118,186,901
G
USH1C
USH1 protein network component harmonin
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr11:17,548,501...17,598,923
Ensembl chr11:17,233,854...17,284,256
G
BBS10
Bardet-Biedl syndrome 10
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:36125046)
MGI Ensembl
PMID:36125046
GO_REF:0000107
NCBI chr12:73,862,775...73,867,377
Ensembl chr12:76,713,028...76,716,956
G
GNAT1
G protein subunit alpha transducin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19815523)
Ensembl MGI
PMID:19815523
GO_REF:0000107
NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
G
GNAT2
G protein subunit alpha transducin 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19815523)
Ensembl MGI
PMID:19815523
GO_REF:0000107
NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
G
NOTCH1
notch receptor 1
involved_in acts_upstream_of
IEA ISO
(PMID:16452096)
Ensembl MGI
PMID:16452096
GO_REF:0000107
NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
G
CFH
complement factor H
acts_upstream_of_or_within
ISO
(PMID:23844226), (PMID:25991857)
MGI
PMID:23844226 PMID:25991857
NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
G
CLDN19
claudin 19
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:42,032,999...42,040,006
Ensembl chr 1:43,408,876...43,417,448
G
CLDN3
claudin 3
involved_in
ISO
(PMID:27593915)
ARUK-UCL
PMID:27593915
Ensembl chr 7:80,924,731...80,925,393
G
IHH
Indian hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18582859)
Ensembl MGI
PMID:18582859
GO_REF:0000107
NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506
G
MED1
mediator complex subunit 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118
G
MFSD2A
MFSD2 lysolipid transporter A, lysophospholipid
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:27008858)
Ensembl ARUK-UCL
PMID:27008858
GO_REF:0000107
NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9071226)
Ensembl MGI
PMID:9071226
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
PAX2
paired box 2
involved_in
ISO
(PMID:8951055)
DFLAT
PMID:8951055
NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
G
SLC38A8
solute carrier family 38 member 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:37862028)
MGI Ensembl
PMID:37862028
GO_REF:0000107
NCBI chr16:64,676,787...64,709,083
Ensembl chr16:84,020,458...84,053,458
G
TBC1D32
TBC1 domain family member 32
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20159594)
Ensembl MGI
PMID:20159594
GO_REF:0000107
NCBI chr 6:118,884,928...119,139,138
Ensembl chr 6:123,022,008...123,273,810
G
TMEM135
transmembrane protein 135
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:33064130)
Ensembl MGI
PMID:33064130
GO_REF:0000107
NCBI chr11:82,089,010...82,360,744
Ensembl chr11:85,696,632...85,966,778
G
AHI1
Abelson helper integration site 1
involved_in
ISO
(PMID:20081859)
CACAO
PMID:20081859
NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232
G
ALMS1
ALMS1 centrosome and basal body associated protein
acts_upstream_of_or_within
ISO
(PMID:16000322)
MGI
PMID:16000322
NCBI chr2A:73,438,657...73,671,313
Ensembl chr2A:74,926,650...75,152,139
G
BBS4
Bardet-Biedl syndrome 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15173597)
Ensembl MGI
PMID:15173597
GO_REF:0000107
NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964
G
BHLHE23
basic helix-loop-helix family member e23
acts_upstream_of_or_within
ISO
(PMID:17255172)
MGI
PMID:17255172
NCBI chr20:59,385,608...59,392,078
G
CFH
complement factor H
acts_upstream_of_or_within
ISO
(PMID:17921253)
MGI
PMID:17921253
NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
G
NAGLU
N-acetyl-alpha-glucosaminidase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17712420)
Ensembl MGI
PMID:17712420
GO_REF:0000107
NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
G
NRL
neural retina leucine zipper
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11694879)
Ensembl TreeGrafter MGI
PMID:11694879
GO_REF:0000107 GO_REF:0000118
NCBI chr14:4,858,105...4,891,207
Ensembl chr14:22,982,367...22,998,187
G
NTRK2
neurotrophic receptor tyrosine kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10516311)
Ensembl MGI
PMID:10516311
GO_REF:0000107
NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
G
RORB
RAR related orphan receptor B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030
G
RP1
RP1 axonemal microtubule associated
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879 Ensembl chr 8:48,419,033...48,583,879
G
RPGRIP1
RPGR interacting protein 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr14:2,105,703...2,169,362
Ensembl chr14:20,185,236...20,247,064
G
RPGRIP1L
RPGRIP1 like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174
G
SAMD11
sterile alpha motif domain containing 11
involved_in
ISO
(PMID:33603070)
UniProt
PMID:33603070
G
SAMD7
sterile alpha motif domain containing 7
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:166,914,164...166,952,937
Ensembl chr 3:174,980,176...175,007,421
G
TRPM1
transient receptor potential cation channel subfamily M member 1
acts_upstream_of_or_within
ISO
(PMID:19966281)
MGI
PMID:19966281
NCBI chr15:9,492,500...9,653,644
Ensembl chr15:28,530,878...28,690,947
G
BBS10
Bardet-Biedl syndrome 10
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:36125046)
MGI Ensembl
PMID:36125046
GO_REF:0000107
NCBI chr12:73,862,775...73,867,377
Ensembl chr12:76,713,028...76,716,956
G
CNTF
ciliary neurotrophic factor
involved_in acts_upstream_of
IEA ISO
(PMID:15207851)
Ensembl MGI
PMID:15207851
GO_REF:0000107
NCBI chr11:53,876,081...53,882,870
Ensembl chr11:57,336,792...57,341,121
G
GNAT1
G protein subunit alpha transducin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19815523)
Ensembl MGI
PMID:19815523
GO_REF:0000107
NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
G
GNAT2
G protein subunit alpha transducin 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19815523)
Ensembl MGI
PMID:19815523
GO_REF:0000107
NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
G
NDP
norrin cystine knot growth factor NDP
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9071226)
Ensembl MGI
PMID:9071226
GO_REF:0000107
NCBI chr X:36,399,868...36,424,953
Ensembl chr X:44,224,161...44,249,067
G
PTN
pleiotrophin
ISO
RGD
PMID:16914133
RGD:9831439
NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
G
RORB
RAR related orphan receptor B
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25296752)
Ensembl MGI
PMID:25296752
GO_REF:0000107
NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030
G
SOX8
SRY-box transcription factor 8
acts_upstream_of acts_upstream_of_or_within
ISO
(PMID:19490914)
MGI
PMID:19490914
G
SOX9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:19490914)
MGI
PMID:19490914
NCBI chr17:66,028,737...66,034,122
G
STAT3
signal transducer and activator of transcription 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15207851)
Ensembl MGI
PMID:15207851
GO_REF:0000107
NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067
G
CASZ1
castor zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:25654255)
MGI
PMID:25654255
NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091
G
NAGLU
N-acetyl-alpha-glucosaminidase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:26607664)
Ensembl MGI
PMID:26607664
GO_REF:0000107
NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
G
PTN
pleiotrophin
ISO
RGD
PMID:16914133
RGD:9831439
NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
G
RHO
rhodopsin
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:32960171)
Ensembl MGI
PMID:32960171
GO_REF:0000107
NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
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