Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:copper ion homeostasis
go back to main search page
Accession:GO:0055070 term browser browse the term
Definition:Any process involved in the maintenance of an internal steady state of copper ions within an organism or cell.
Synonyms:broad_synonym: copper homeostasis


show annotations for term's descendants           Sort by:
copper ion homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMMD1 copper metabolism domain containing 1 involved_in IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:61,970,830...62,216,677
Ensembl chr2A:63,121,521...63,349,131 		JBrowse link
G LOC100976808 protein SCO2 homolog, mitochondrial acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:30,769,899...30,772,008
Ensembl chr22:49,879,867...49,880,667 		JBrowse link
G LOC100980340 protoheme IX farnesyltransferase, mitochondrial acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:37,443,319...37,582,436
Ensembl chr17:42,091,452...42,274,762 		JBrowse link
G LOC100988585 transmembrane protein 220 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr17:40,923,397...40,973,382
Ensembl chr17:45,703,642...45,720,520
Ensembl chr17:45,703,642...45,720,520 		JBrowse link
intracellular copper ion homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in ISO PMID:18160489 UniProt PMID:18160489 RGD:42722002 NCBI chr2B:106,467,345...106,476,614
Ensembl chr2B:225,058,771...225,067,626 		JBrowse link
G ANKRD9 ankyrin repeat domain 9 involved_in ISO (PMID:24522796) UniProt PMID:24522796 NCBI chr14:83,122,024...83,128,173 JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:10526140) MGI PMID:10526140 NCBI chr11:124,881,191...124,944,472
Ensembl chr11:128,775,329...128,847,482 		JBrowse link
G APP amyloid beta precursor protein acts_upstream_of_or_within ISO (PMID:15447675)
(PMID:10526140) 		MGI PMID:10526140 PMID:15447675 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G ARF1 ARF GTPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,484,803...203,501,395
Ensembl chr 1:208,695,615...208,712,105 		JBrowse link
G ATOX1 antioxidant 1 copper chaperone acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:147,166,744...147,181,970
Ensembl chr 5:153,169,467...153,184,505 		JBrowse link
G ATP7A ATPase copper transporting alpha involved_in
acts_upstream_of_or_within 		IEA Ensembl GO_REF:0000107 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G ATP7B ATPase copper transporting beta acts_upstream_of_or_within ISO (PMID:10441329)
(PMID:11085952), (PMID:1588441), (PMID:2845190), (PMID:6863890), (PMID:8040371), (PMID:8257436), (PMID:9392450), (PMID:9484715) 		MGI PMID:1588441 PMID:2845190 PMID:6863890 PMID:8040371 PMID:8257436 More... NCBI chr13:33,063,698...33,144,528
Ensembl chr13:51,810,555...51,851,839 		JBrowse link
G CCDC22 CCC complex scaffolding subunit CCDC22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,535,439...41,550,547
Ensembl chr  X:49,387,980...49,402,742 		JBrowse link
G CP ceruloplasmin involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:36261001) Ensembl
MGI		 PMID:36261001 GO_REF:0000107 NCBI chr 3:146,180,527...146,239,833
Ensembl chr 3:153,764,830...153,817,544 		JBrowse link
G LOC100976808 protein SCO2 homolog, mitochondrial involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr22:30,769,899...30,772,008
Ensembl chr22:49,879,867...49,880,667 		JBrowse link
G LOC100978202 ADP-ribosylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:123,707,275...123,709,101
Ensembl chr 1:208,695,615...208,712,105 		JBrowse link
G LOC100988585 transmembrane protein 220 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:25683716)
(PMID:28647369)
(PMID:28973536) 		InterPro
MGI
UniProt		 PMID:25683716 PMID:28647369 PMID:28973536 GO_REF:0000002 GO_REF:0000104 NCBI chr17:40,923,397...40,973,382
Ensembl chr17:45,703,642...45,720,520
Ensembl chr17:45,703,642...45,720,520 		JBrowse link
G LOC100995989 cytochrome c oxidase assembly protein COX19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:1,126,328...1,132,999
Ensembl chr 7:1,337,290...1,345,755 		JBrowse link
G PRND prion like protein doppel acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:4,749,111...4,755,647
Ensembl chr20:4,548,403...4,548,933 		JBrowse link
G SLC30A10 solute carrier family 30 member 10 NOT|involved_in ISO (PMID:25319704) UniProt PMID:25319704 NCBI chr 1:195,480,707...195,528,243
Ensembl chr 1:200,522,554...200,566,228 		JBrowse link
G SLC31A1 solute carrier family 31 member 1 acts_upstream_of_or_within ISO (PMID:24167251) MGI PMID:24167251 NCBI chr 9:84,319,304...84,362,288
Ensembl chr 9:112,691,503...112,734,352 		JBrowse link
G SLC31A2 solute carrier family 31 member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:84,249,284...84,271,596
Ensembl chr 9:112,622,147...112,635,294 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    homeostatic process 1935
      chemical homeostasis 1182
        inorganic ion homeostasis 577
          copper ion homeostasis 20
            intracellular copper ion homeostasis 18
Path 2
Term Annotations click to browse term
  biological_process 19315
    homeostatic process 1935
      chemical homeostasis 1182
        monoatomic ion homeostasis 660
          monoatomic cation homeostasis 646
            copper ion homeostasis 20
              intracellular copper ion homeostasis 18
paths to the root