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ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear DNA-directed RNA polymerase complex
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Accession:GO:0055029 term browser browse the term
Definition:A protein complex, located in the nucleus, that possesses DNA-directed RNA polymerase activity.


show annotations for term's descendants           Sort by:
nuclear DNA-directed RNA polymerase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polr1d RNA polymerase I and III subunit D part_of IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr12:13,084,505...13,118,069
Ensembl chr12:13,084,512...13,095,627 		JBrowse link
G Polr2j RNA polymerase II subunit J part_of IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr12:26,179,649...26,185,201
Ensembl chr12:26,179,649...26,185,201 		JBrowse link
G Polr3b RNA polymerase III subunit B part_of IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 7:20,926,866...21,030,133
Ensembl chr 7:20,926,866...21,033,654 		JBrowse link
alpha DNA polymerase:primase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC134479640 DNA primase small subunit part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000117 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000117 Ensembl chr 7:855,315...871,968 JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit part_of IDA
IEA
ISO
IBA
ISS
IC 		GO_REF:0000117
(PMID:10523676), (PMID:8026492), (PMID:9584195)
GO_REF:0000114
GO_REF:0000033
(PMID:2175912), (PMID:22465957), (PMID:26975377), (PMID:8026492)
GO_REF:0000107
GO_REF:0000024 		UniProt
RGD
ComplexPortal
GO_Central
Ensembl		 PMID:2175912 PMID:8026492 PMID:9584195 PMID:10523676 PMID:22465957 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114 GO_REF:0000117, RGD:1580605, RGD:2307013 NCBI chr  X:62,028,475...62,342,455
Ensembl chr  X:62,028,476...62,342,355 		JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit part_of TAS
ISO
IBA
IEA
ISS
IC 		(PMID:10523676), (PMID:8026492), (PMID:9584195)
GO_REF:0000114
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(PMID:22465957), (PMID:26975377), (PMID:8026492) 		RGD
ComplexPortal
GO_Central
Ensembl
UniProt		 PMID:8026492 PMID:9584195 PMID:10523676 PMID:22465957 PMID:26975377 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114, RGD:633584, RGD:2307013 NCBI chr 1:212,656,500...212,680,667
Ensembl chr 1:212,656,501...212,680,542 		JBrowse link
G Prim1 DNA primase subunit 1 part_of ISO
IEA
IBA 		(PMID:26975377), (PMID:8026492)
GO_REF:0000117
GO_REF:0000033
(PMID:10523676), (PMID:8026492) 		RGD
UniProt
GO_Central		 PMID:8026492 PMID:10523676 PMID:26975377 GO_REF:0000033 GO_REF:0000117 NCBI chr 7:1,031,436...1,047,134 JBrowse link
G Prim2 DNA primase subunit 2 part_of ISO
IEA
IBA
ISS 		(PMID:26975377), (PMID:8026492)
GO_REF:0000107
GO_REF:0000033
(PMID:10523676), (PMID:8026492)
GO_REF:0000114
GO_REF:0000117
GO_REF:0000024 		RGD
Ensembl
GO_Central
ComplexPortal
UniProt		 PMID:8026492 PMID:10523676 PMID:26975377 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114 GO_REF:0000117 NCBI chr 9:43,188,350...43,400,482
Ensembl chr 9:43,188,350...43,398,990 		JBrowse link
Cdc73/Paf1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 part_of ISS
IEA
IBA
ISO 		GO_REF:0000024
GO_REF:0000002
GO_REF:0000033
(PMID:16307923), (PMID:18987311), (PMID:20178742) 		UniProt
InterPro
GO_Central
RGD		 PMID:16307923 PMID:18987311 PMID:20178742 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr13:57,897,924...58,000,031
Ensembl chr13:57,883,983...57,999,978 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component part_of
located_in 		ISO
IEA
IBA 		(PMID:16307923), (PMID:20178742)
GO_REF:0000107
UniProtKB:Q8JZM7 (PMID:27749823)
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:16307923 PMID:20178742 PMID:27749823 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:174,571,952...174,601,974
Ensembl chr 1:174,571,928...174,602,130 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component part_of ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000002
(PMID:16307923), (PMID:18987311), (PMID:20178742) 		UniProt
InterPro
RGD		 PMID:16307923 PMID:18987311 PMID:20178742 GO_REF:0000002 GO_REF:0000024 NCBI chr 8:85,080,036...85,104,471
Ensembl chr 8:85,079,996...85,105,094 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component part_of ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
UniProtKB:Q8JZM7 (PMID:27749823)
GO_REF:0000033
(PMID:16307923), (PMID:20178742) 		UniProt
Ensembl
InterPro
RGD
GO_Central		 PMID:16307923 PMID:20178742 PMID:27749823 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:92,811,197...92,816,775
Ensembl chr 1:92,798,237...92,816,779 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 part_of ISO
IEA
IBA 		(PMID:18987311)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:18987311 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:97,957,479...97,973,767
Ensembl chr 2:97,948,443...97,981,092 		JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) part_of ISO
IEA
IBA 		(PMID:20178742)
GO_REF:0000117
GO_REF:0000107
UniProtKB:Q8JZM7 (PMID:27749823)
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:20178742 PMID:27749823 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:127,113,171...127,172,761
Ensembl chr 3:127,113,163...127,172,761 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex part_of ISO
IEA
IBA
ISS 		(PMID:20178742)
GO_REF:0000117
UniProtKB:Q8JZM7 (PMID:27749823)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024 		RGD
UniProt
GO_Central
Ensembl		 PMID:20178742 PMID:27749823 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:63,999,669...64,016,959
Ensembl chr 8:63,999,671...64,016,846 		JBrowse link
core TFIIH complex portion of holo TFIIH complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2h2 general transcription factor IIH subunit 2 part_of ISS
ISO 		GO_REF:0000024
(PMID:27193682) 		UniProt
RGD		 PMID:27193682 GO_REF:0000024 NCBI chr 2:33,358,863...33,386,726
Ensembl chr 2:33,358,869...33,386,688 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO
IEA
ISS 		(PMID:27193682)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:27193682 GO_REF:0000024 GO_REF:0000107 NCBI chr12:37,669,995...37,687,505
Ensembl chr12:37,669,997...37,686,466 		JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr20:3,076,110...3,081,805
Ensembl chr20:3,076,088...3,081,760 		JBrowse link
RNA polymerase I complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC109542.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC120098305 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,257,666...1,258,121
Ensembl chr18:1,530,299...1,541,680 		JBrowse link
G Polr1a RNA polymerase I subunit A part_of IDA
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
GO_REF:0000117
(PMID:15226435), (PMID:9236775)
(PMID:34671025), (PMID:36271492) 		Ensembl
GO_Central
UniProt
RGD		 PMID:9236775 PMID:15226435 PMID:34671025 PMID:36271492 PMID:9422795 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:2312782 NCBI chr 4:105,508,305...105,572,272
Ensembl chr 4:105,508,248...105,574,036 		JBrowse link
G Polr1b RNA polymerase I subunit B part_of IDA
IEA
IBA
ISO 		GO_REF:0000117
GO_REF:0000033
(PMID:9236775)
(PMID:34671025), (PMID:36271492)
GO_REF:0000107 		UniProt
GO_Central
RGD
Ensembl		 PMID:9236775 PMID:34671025 PMID:36271492 PMID:9422795 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:2312782 NCBI chr 3:136,787,130...136,811,608
Ensembl chr 3:136,787,107...136,811,607 		JBrowse link
G Polr1c RNA polymerase I and III subunit C part_of ISO
IEA 		(PMID:34671025), (PMID:36271492)
GO_REF:0000117
GO_REF:0000107
(PMID:7929437) 		RGD
UniProt
Ensembl		 PMID:7929437 PMID:34671025 PMID:36271492 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:22,233,318...22,237,430
Ensembl chr 9:22,233,305...22,237,428 		JBrowse link
G Polr1d RNA polymerase I and III subunit D part_of ISO
IEA 		(PMID:34671025), (PMID:36271492)
GO_REF:0000107
(PMID:15226435) 		RGD
Ensembl		 PMID:15226435 PMID:34671025 PMID:36271492 GO_REF:0000107 NCBI chr12:13,084,505...13,118,069
Ensembl chr12:13,084,512...13,095,627 		JBrowse link
G Polr1e RNA polymerase I subunit E part_of ISO
IEA
IBA 		(PMID:16809778), (PMID:34671025), (PMID:36271492)
GO_REF:0000107
GO_REF:0000033
(PMID:8641287) 		RGD
Ensembl
GO_Central		 PMID:8641287 PMID:16809778 PMID:34671025 PMID:36271492 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:64,075,123...64,090,900
Ensembl chr 5:64,075,122...64,091,039 		JBrowse link
G Polr1f RNA polymerase I subunit F part_of ISO
IBA 		(PMID:34671025), (PMID:36271492)
GO_REF:0000033 		RGD
GO_Central		 PMID:34671025 PMID:36271492 GO_REF:0000033 NCBI chr 6:55,780,706...55,797,935
Ensembl chr 6:55,780,706...55,797,935 		JBrowse link
G Polr1g RNA polymerase I subunit G part_of ISO
IEA
IBA 		(PMID:16809778), (PMID:34671025), (PMID:36271492)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033
(PMID:15226435) 		RGD
UniProt
Ensembl
GO_Central		 PMID:15226435 PMID:16809778 PMID:34671025 PMID:36271492 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:88,135,493...88,138,769
Ensembl chr 1:88,135,493...88,138,769 		JBrowse link
G Polr1h RNA polymerase I subunit H part_of ISO
IBA 		(PMID:34671025), (PMID:36271492)
GO_REF:0000033 		RGD
GO_Central		 PMID:34671025 PMID:36271492 GO_REF:0000033 NCBI chr20:1,600,170...1,604,088
Ensembl chr20:1,595,945...1,604,088 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E part_of IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:34671025), (PMID:36271492) 		Ensembl
GO_Central
RGD		 PMID:34671025 PMID:36271492 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:10,317,332...10,321,280
Ensembl chr 7:10,317,389...10,321,276 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F part_of TAS
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:34671025), (PMID:36271492) 		Ensembl
GO_Central
RGD		 PMID:34671025 PMID:36271492 PMID:10393248 GO_REF:0000033 GO_REF:0000107, RGD:1299534 NCBI chr 7:112,592,977...112,604,681
Ensembl chr 7:112,593,027...112,604,666 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H part_of ISO
IBA 		(PMID:34671025), (PMID:36271492)
GO_REF:0000033 		RGD
GO_Central		 PMID:34671025 PMID:36271492 GO_REF:0000033 NCBI chr11:93,696,423...93,701,902
Ensembl chr10:105,353,444...105,354,241
Ensembl chr11:105,353,444...105,354,241 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K part_of ISO
IBA 		(PMID:34671025), (PMID:36271492)
GO_REF:0000033 		RGD
GO_Central		 PMID:34671025 PMID:36271492 GO_REF:0000033 NCBI chr 7:69,241,233...69,244,579
Ensembl chr 7:69,232,179...69,244,578 		JBrowse link
G Polr2k-ps2 RNA polymerase II, I and III subunit K, pseudogene 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:208,943,604...208,944,098
Ensembl chr 1:218,368,538...218,368,861 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L part_of ISO
IBA 		(PMID:34671025), (PMID:36271492)
GO_REF:0000033 		RGD
GO_Central		 PMID:34671025 PMID:36271492 GO_REF:0000033 NCBI chr 1:205,999,607...206,001,615
Ensembl chr19:8,341,868...8,342,071 		JBrowse link
G Polr2sl1 RNA polymerase II, I and III subunit like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:5,743,067...5,743,270
Ensembl chr 4:6,418,202...6,418,405 		JBrowse link
RNA polymerase II, core complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC109542.1 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000117 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000117
G LOC120098305 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000104 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 NCBI chr18:1,257,666...1,258,121
Ensembl chr18:1,530,299...1,541,680 		JBrowse link
G Myzap myocardial zonula adherens protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:81,036,599...81,123,933
Ensembl chr 8:81,036,601...81,123,810 		JBrowse link
G Polr2a RNA polymerase II subunit A part_of ISO
IBA 		(PMID:9852112)
GO_REF:0000033 		RGD
GO_Central		 PMID:9852112 GO_REF:0000033 NCBI chr10:54,951,162...54,977,179
Ensembl chr10:54,951,162...54,977,179 		JBrowse link
G Polr2b RNA polymerase II subunit B part_of ISO
IEA
IBA 		(PMID:9852112)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9852112 GO_REF:0000033 GO_REF:0000107 NCBI chr14:30,797,228...30,834,916
Ensembl chr14:31,151,390...31,189,222 		JBrowse link
G Polr2c RNA polymerase II subunit C part_of ISO
IEA
IBA 		(PMID:9852112)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9852112 GO_REF:0000033 GO_REF:0000107 NCBI chr19:10,164,148...10,170,930
Ensembl chr19:10,164,145...10,170,971 		JBrowse link
G Polr2d RNA polymerase II subunit D part_of ISO
IEA
IBA 		(PMID:9528765), (PMID:9852112)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9528765 PMID:9852112 GO_REF:0000033 GO_REF:0000107 NCBI chr18:23,692,578...23,699,709
Ensembl chr18:23,692,578...23,699,709 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E part_of ISO
IBA
IEA
ISS 		(PMID:9852112)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024 		RGD
GO_Central
Ensembl
UniProt		 PMID:9852112 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:10,317,332...10,321,280
Ensembl chr 7:10,317,389...10,321,276 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F part_of TAS
IEA
IBA
ISS
ISO 		GO_REF:0000107
GO_REF:0000002
GO_REF:0000033
GO_REF:0000024
(PMID:9852112) 		Ensembl
InterPro
GO_Central
UniProt
RGD		 PMID:9852112 PMID:10393248 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:1299534 NCBI chr 7:112,592,977...112,604,681
Ensembl chr 7:112,593,027...112,604,666 		JBrowse link
G Polr2g RNA polymerase II subunit G part_of ISO
IBA
IEA
ISS 		(PMID:9852112)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024 		RGD
GO_Central
Ensembl
UniProt		 PMID:9852112 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:215,118,278...215,125,389
Ensembl chr 1:215,118,262...215,121,805 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H part_of ISO
IEA
IBA 		(PMID:9852112)
GO_REF:0000104
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:9852112 GO_REF:0000033 GO_REF:0000104 NCBI chr11:93,696,423...93,701,902
Ensembl chr10:105,353,444...105,354,241
Ensembl chr11:105,353,444...105,354,241 		JBrowse link
G Polr2i RNA polymerase II subunit I part_of ISO
IEA
IBA 		(PMID:9852112)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9852112 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:94,610,976...94,612,413
Ensembl chr 1:94,610,942...94,613,000 		JBrowse link
G Polr2j RNA polymerase II subunit J part_of ISO
IEA
IBA 		(PMID:9852112)
GO_REF:0000002
GO_REF:0000117
GO_REF:0000033
(PMID:9099876) 		RGD
InterPro
UniProt
GO_Central		 PMID:9099876 PMID:9852112 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr12:26,179,649...26,185,201
Ensembl chr12:26,179,649...26,185,201 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K part_of ISO
IBA 		(PMID:9852112)
GO_REF:0000033 		RGD
GO_Central		 PMID:9852112 GO_REF:0000033 NCBI chr 7:69,241,233...69,244,579
Ensembl chr 7:69,232,179...69,244,578 		JBrowse link
G Polr2k-ps2 RNA polymerase II, I and III subunit K, pseudogene 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:208,943,604...208,944,098
Ensembl chr 1:218,368,538...218,368,861 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L part_of ISO
IEA
IBA 		(PMID:9852112)
GO_REF:0000117
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:9852112 GO_REF:0000033 GO_REF:0000117 NCBI chr 1:205,999,607...206,001,615
Ensembl chr19:8,341,868...8,342,071 		JBrowse link
G Polr2m RNA polymerase II subunit M part_of ISO
IBA 		UniProtKB:P19387|UniProtKB:P24928|UniProtKB:P30876 (PMID:30190596)
GO_REF:0000033 		RGD
GO_Central		 PMID:30190596 GO_REF:0000033 NCBI chr 8:81,012,770...81,020,201
Ensembl chr 8:81,012,771...81,020,302 		JBrowse link
G Polr2sl1 RNA polymerase II, I and III subunit like 1 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000117 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000117 NCBI chr 4:5,743,067...5,743,270
Ensembl chr 4:6,418,202...6,418,405 		JBrowse link
G Tuft1 tuftelin 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:184,949,437...184,995,321
Ensembl chr 2:184,949,437...184,995,383 		JBrowse link
RNA polymerase II, holoenzyme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000067613 part_of IEA GO_REF:0000117 UniProt GO_REF:0000117
G Gtf2f2 general transcription factor IIF subunit 2 part_of IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr15:57,615,361...57,736,477
Ensembl chr15:57,614,841...57,736,516 		JBrowse link
RNA polymerase III complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC109542.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Crcp CGRP receptor component part_of IEA
IBA
ISO 		GO_REF:0000002
GO_REF:0000107
GO_REF:0000033
(PMID:33335104), (PMID:34675218) 		InterPro
Ensembl
GO_Central
RGD		 PMID:33335104 PMID:34675218 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:32,260,108...32,315,116
Ensembl chr12:32,260,143...32,315,237 		JBrowse link
G LOC120098305 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,257,666...1,258,121
Ensembl chr18:1,530,299...1,541,680 		JBrowse link
G Polr1c RNA polymerase I and III subunit C part_of ISO
IEA 		(PMID:24107381), (PMID:33335104), (PMID:34675218)
GO_REF:0000107 		RGD
Ensembl		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000107 NCBI chr 9:22,233,318...22,237,430
Ensembl chr 9:22,233,305...22,237,428 		JBrowse link
G Polr1d RNA polymerase I and III subunit D part_of ISO
IEA 		(PMID:33335104), (PMID:34675218)
GO_REF:0000107 		RGD
Ensembl		 PMID:33335104 PMID:34675218 GO_REF:0000107 NCBI chr12:13,084,505...13,118,069
Ensembl chr12:13,084,512...13,095,627 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E part_of IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:33335104), (PMID:34675218) 		Ensembl
GO_Central
RGD		 PMID:33335104 PMID:34675218 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:10,317,332...10,321,280
Ensembl chr 7:10,317,389...10,321,276 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F part_of TAS
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:33335104), (PMID:34675218) 		Ensembl
GO_Central
RGD		 PMID:33335104 PMID:34675218 PMID:10393248 GO_REF:0000033 GO_REF:0000107, RGD:1299534 NCBI chr 7:112,592,977...112,604,681
Ensembl chr 7:112,593,027...112,604,666 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H part_of ISO
IBA 		(PMID:33335104), (PMID:34675218)
GO_REF:0000033 		RGD
GO_Central		 PMID:33335104 PMID:34675218 GO_REF:0000033 NCBI chr11:93,696,423...93,701,902
Ensembl chr10:105,353,444...105,354,241
Ensembl chr11:105,353,444...105,354,241 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K part_of ISO
IBA 		(PMID:33335104), (PMID:34675218)
GO_REF:0000033 		RGD
GO_Central		 PMID:33335104 PMID:34675218 GO_REF:0000033 NCBI chr 7:69,241,233...69,244,579
Ensembl chr 7:69,232,179...69,244,578 		JBrowse link
G Polr2k-ps2 RNA polymerase II, I and III subunit K, pseudogene 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:208,943,604...208,944,098
Ensembl chr 1:218,368,538...218,368,861 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L part_of ISO
IBA 		(PMID:33335104), (PMID:34675218)
GO_REF:0000033 		RGD
GO_Central		 PMID:33335104 PMID:34675218 GO_REF:0000033 NCBI chr 1:205,999,607...206,001,615
Ensembl chr19:8,341,868...8,342,071 		JBrowse link
G Polr2sl1 RNA polymerase II, I and III subunit like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:5,743,067...5,743,270
Ensembl chr 4:6,418,202...6,418,405 		JBrowse link
G Polr3a RNA polymerase III subunit A part_of IBA
ISO 		GO_REF:0000033
(PMID:24107381), (PMID:33335104), (PMID:34675218) 		GO_Central
RGD		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000033 NCBI chr16:56,066...95,060
Ensembl chr16:56,066...95,060 		JBrowse link
G Polr3b RNA polymerase III subunit B part_of IBA
ISO 		GO_REF:0000033
(PMID:24107381), (PMID:33335104), (PMID:34675218) 		GO_Central
RGD		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000033 NCBI chr 7:20,926,866...21,030,133
Ensembl chr 7:20,926,866...21,033,654 		JBrowse link
G Polr3c RNA polymerase III subunit C part_of IEA
ISO
IBA 		GO_REF:0000104
GO_REF:0000107
GO_REF:0000002
(PMID:24107381), (PMID:33335104), (PMID:34675218)
GO_REF:0000033 		UniProt
Ensembl
InterPro
RGD
GO_Central		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:186,935,038...186,950,962
Ensembl chr 2:186,935,038...186,950,962 		JBrowse link
G Polr3d RNA polymerase III subunit D part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
(PMID:24107381), (PMID:33335104), (PMID:34675218) 		GO_Central
InterPro
Ensembl
RGD		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr15:51,921,283...51,925,952
Ensembl chr15:51,921,283...51,925,691 		JBrowse link
G Polr3e RNA polymerase III subunit E part_of ISO
IEA
IBA 		(PMID:24107381), (PMID:33335104), (PMID:34675218)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:175,466,091...175,494,679
Ensembl chr 1:184,897,426...184,926,534 		JBrowse link
G Polr3f RNA polymerase III subunit F part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000117
GO_REF:0000104
GO_REF:0000107
GO_REF:0000002
(PMID:24107381), (PMID:33335104), (PMID:34675218) 		GO_Central
UniProt
Ensembl
InterPro
RGD		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:152,361,798...152,378,169
Ensembl chr 3:152,361,798...152,378,168 		JBrowse link
G Polr3g RNA polymerase III subunit G part_of IBA
ISO 		GO_REF:0000033
(PMID:24107381), (PMID:33335104), (PMID:34675218) 		GO_Central
RGD		 PMID:24107381 PMID:33335104 PMID:34675218 GO_REF:0000033 NCBI chr 2:13,680,893...13,721,802
Ensembl chr 2:13,680,895...13,721,802 		JBrowse link
G Polr3gl RNA polymerase III subunit GL part_of ISO
IEA 		(PMID:24107381)
GO_REF:0000104 		RGD
UniProt		 PMID:24107381 GO_REF:0000104 NCBI chr 2:186,800,419...186,818,048
Ensembl chr 2:186,800,351...186,805,197 		JBrowse link
G Polr3h RNA polymerase III subunit H part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:12391170), (PMID:33335104), (PMID:34675218) 		GO_Central
Ensembl
RGD		 PMID:12391170 PMID:33335104 PMID:34675218 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:115,309,571...115,319,881
Ensembl chr 7:115,309,589...115,319,915 		JBrowse link
G Polr3k RNA polymerase III subunit K part_of ISO
IEA
IBA 		(PMID:33335104), (PMID:34675218)
GO_REF:0000117
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:33335104 PMID:34675218 GO_REF:0000033 GO_REF:0000117 NCBI chr 3:189,360,349...189,364,546
Ensembl chr 3:189,360,171...189,366,697 		JBrowse link
G Vkorc1l1 vitamin K epoxide reductase complex, subunit 1-like 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:32,354,078...32,404,327 JBrowse link
transcription factor TFIIA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015889.1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000064241 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033
G ENSRNOG00000067796 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002
G Gtf2a1 general transcription factor 2A subunit 1 part_of IEA
ISO
IBA 		GO_REF:0000002
GO_REF:0000117
GO_REF:0000107
(PMID:7724559), (PMID:8626665)
(PMID:15927180)
GO_REF:0000033 		InterPro
UniProt
Ensembl
RGD
GO_Central		 PMID:7724559 PMID:8626665 PMID:15927180 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:116,219,614...116,252,220
Ensembl chr 6:116,219,614...116,252,220 		JBrowse link
G Gtf2a1l general transcription factor 2A subunit 1 like part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000117
GO_REF:0000002
(PMID:15927180) 		GO_Central
UniProt
InterPro
RGD		 PMID:15927180 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr 6:5,752,814...5,834,797
Ensembl chr 6:11,506,363...11,565,862 		JBrowse link
G Gtf2a2 general transcription factor 2A subunit 2 part_of IEA
ISO
IBA 		GO_REF:0000002
(PMID:7724559), (PMID:7958899), (PMID:7958900), (PMID:8626665)
GO_REF:0000033 		InterPro
RGD
GO_Central		 PMID:7724559 PMID:7958899 PMID:7958900 PMID:8626665 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:79,542,682...79,556,484
Ensembl chr 8:79,547,307...79,565,408 		JBrowse link
G Tbp TATA box binding protein part_of ISO
IEA 		(PMID:7724559)
GO_REF:0000107 		RGD
Ensembl		 PMID:7724559 GO_REF:0000107 NCBI chr 1:65,136,420...65,153,515
Ensembl chr 1:65,136,448...65,190,899 		JBrowse link
G Tbpl1 TATA-box binding protein like 1 part_of ISO (PMID:15927180) RGD PMID:15927180 NCBI chr 1:24,597,028...24,622,445
Ensembl chr 1:24,597,074...24,622,439 		JBrowse link
transcription factor TFIID complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of ISO
IEA 		(PMID:27193682)
GO_REF:0000107 		RGD
Ensembl		 PMID:27193682 GO_REF:0000107 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:88,160,988...88,175,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:24,148,084...24,190,898 		JBrowse link
G Gtf2a1 general transcription factor 2A subunit 1 part_of ISO
IEA 		(PMID:27193682)
GO_REF:0000107 		RGD
Ensembl		 PMID:27193682 GO_REF:0000107 NCBI chr 6:116,219,614...116,252,220
Ensembl chr 6:116,219,614...116,252,220 		JBrowse link
G Gtf2a2 general transcription factor 2A subunit 2 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 8:79,542,682...79,556,484
Ensembl chr 8:79,547,307...79,565,408 		JBrowse link
G Gtf2b general transcription factor IIB part_of ISO
IEA 		(PMID:27193682)
GO_REF:0000107 		RGD
Ensembl		 PMID:27193682 GO_REF:0000107 NCBI chr 2:234,427,734...234,446,043
Ensembl chr 2:234,427,637...234,446,049 		JBrowse link
G Gtf2e1 general transcription factor IIE subunit 1 part_of ISO
IEA 		(PMID:27193682)
GO_REF:0000107 		RGD
Ensembl		 PMID:27193682 GO_REF:0000107 NCBI chr11:76,687,382...76,720,253
Ensembl chr11:76,687,772...76,720,784 		JBrowse link
G Gtf2e2 general transcription factor IIE subunit 2 part_of ISO
IEA 		(PMID:27193682)
GO_REF:0000107 		RGD
Ensembl		 PMID:27193682 GO_REF:0000107 NCBI chr16:65,102,386...65,152,563
Ensembl chr16:65,102,390...65,161,394 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 part_of ISO
IEA 		(PMID:27193682)
GO_REF:0000107 		RGD
Ensembl		 PMID:27193682 GO_REF:0000107 NCBI chr 9:1,931,033...1,940,197
Ensembl chr 9:1,930,055...1,940,197 		JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 2:33,358,863...33,386,726
Ensembl chr 2:33,358,869...33,386,688 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO
IEA 		(PMID:27193682)
GO_REF:0000107 		RGD
Ensembl		 PMID:27193682 GO_REF:0000107 NCBI chr12:37,669,995...37,687,505
Ensembl chr12:37,669,997...37,686,466 		JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr20:3,076,110...3,081,805
Ensembl chr20:3,076,088...3,081,760 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 1:49,061,904...49,068,612
Ensembl chr 1:49,061,959...49,070,039 		JBrowse link
G Slc25a2 solute carrier family 25 member 2 part_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr18:29,704,182...29,707,563
Ensembl chr18:29,703,871...29,708,827 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 part_of ISO
IEA
IBA 		(PMID:14580349), (PMID:23332750), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:8625415)
GO_REF:0000104
GO_REF:0000002
GO_REF:0000033 		RGD
UniProt
InterPro
GO_Central		 PMID:8625415 PMID:14580349 PMID:23332750 PMID:24927529 PMID:25412659 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr  X:70,680,901...70,756,535
Ensembl chr  X:70,680,906...70,756,735 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 part_of ISO
IEA 		(PMID:14580349), (PMID:15099517), (PMID:23332750), (PMID:29111974), (PMID:7729427), (PMID:7923369)
GO_REF:0000107 		RGD
Ensembl		 PMID:7729427 PMID:7923369 PMID:14580349 PMID:15099517 PMID:23332750 More... GO_REF:0000107 NCBI chr 1:169,506,940...169,508,234
Ensembl chr 1:169,506,940...169,508,208 		JBrowse link
G Taf11 TATA-box binding protein associated factor 11 part_of IEA
IBA
ISO 		GO_REF:0000002
GO_REF:0000033
(PMID:14580349), (PMID:23332750), (PMID:29111974), (PMID:7729427), (PMID:8670810) 		InterPro
GO_Central
RGD		 PMID:7729427 PMID:8670810 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000002 GO_REF:0000033 NCBI chr20:5,957,540...5,965,354
Ensembl chr20:5,957,540...5,963,636 		JBrowse link
G Taf11l1 TATA-box binding protein associated factor 11 like 1 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr10:74,278,561...74,281,058
Ensembl chr10:74,277,657...74,281,166 		JBrowse link
G Taf12 TATA-box binding protein associated factor 12 part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:14580349), (PMID:23332750), (PMID:29111974) 		GO_Central
Ensembl
InterPro
RGD		 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:149,756,826...149,772,886
Ensembl chr 5:149,753,105...149,774,315 		JBrowse link
G Taf13 TATA-box binding protein associated factor 13 part_of IBA
ISO 		GO_REF:0000033
(PMID:23332750), (PMID:29111974), (PMID:7729427) 		GO_Central
RGD		 PMID:7729427 PMID:23332750 PMID:29111974 GO_REF:0000033 NCBI chr 2:198,893,332...198,903,994
Ensembl chr 2:198,893,351...198,904,769 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 part_of ISO
IEA
IBA 		(PMID:10409744), (PMID:14580349), (PMID:23332750), (PMID:27007846), (PMID:29111974), (PMID:9774672)
GO_REF:0000117
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
InterPro
Ensembl
GO_Central		 PMID:9774672 PMID:10409744 PMID:14580349 PMID:23332750 PMID:27007846 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:88,312,374...88,369,399
Ensembl chr 7:88,312,374...88,369,377 		JBrowse link
G Taf3 TATA-box binding protein associated factor 3 part_of ISO (PMID:11438666), (PMID:23332750), (PMID:29111974) RGD PMID:11438666 PMID:23332750 PMID:29111974 NCBI chr17:73,365,162...73,518,053 JBrowse link
G Taf4 TATA-box binding protein associated factor 4 part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:14580349), (PMID:23332750), (PMID:29111974) 		GO_Central
Ensembl
InterPro
RGD		 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:187,395,632...187,461,042
Ensembl chr 3:187,395,632...187,461,123 		JBrowse link
G Taf4b TATA-box binding protein associated factor 4b part_of ISO
IEA
IBA 		(PMID:29111974)
GO_REF:0000002
GO_REF:0000033 		RGD
InterPro
GO_Central		 PMID:29111974 GO_REF:0000002 GO_REF:0000033 NCBI chr18:6,227,299...6,360,970
Ensembl chr18:6,227,345...6,356,275 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:14580349), (PMID:23332750), (PMID:29111974), (PMID:9045704) 		GO_Central
Ensembl
RGD		 PMID:9045704 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:255,899,774...255,915,259
Ensembl chr 1:255,899,770...255,915,268 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 part_of ISO
IEA
IBA 		(PMID:8262073)
GO_REF:0000002
(PMID:14580349), (PMID:23332750), (PMID:27007846), (PMID:29111974)
GO_REF:0000033
GO_REF:0000107 		RGD
InterPro
GO_Central
Ensembl		 PMID:8262073 PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:22,169,570...22,178,031
Ensembl chr12:22,168,718...22,177,938 		JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:215,101,266...215,113,888
Ensembl chr 1:215,101,268...215,113,752 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000002
(PMID:14580349), (PMID:23332750), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:7824954)
(PMID:10438527), (PMID:28893950) 		GO_Central
InterPro
RGD		 PMID:7824954 PMID:10438527 PMID:14580349 PMID:23332750 PMID:24927529 More... GO_REF:0000002 GO_REF:0000033 NCBI chr18:29,704,182...29,713,382
Ensembl chr18:29,705,920...29,712,712 		JBrowse link
G Taf7l TATA-box binding protein associated factor 7-like part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:101,953,508...101,968,336
Ensembl chr  X:101,953,508...101,968,407 		JBrowse link
G Taf7l-ps1 TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:53,649,301...53,650,443
Ensembl chr 7:53,649,301...53,650,443 		JBrowse link
G Taf8 TATA-box binding protein associated factor 8 part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:14580349), (PMID:23332750), (PMID:27007846), (PMID:29111974) 		GO_Central
Ensembl
InterPro
RGD		 PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:20,989,554...21,009,541
Ensembl chr 9:20,989,465...21,009,983 		JBrowse link
G Taf8l1 TATA-box binding protein associated factor 8 like 1 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000107
GO_REF:0000002 		GO_Central
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:105,026,631...105,029,768
Ensembl chr 6:105,027,041...105,027,967 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 part_of ISO
IBA 		(PMID:14580349), (PMID:15899866), (PMID:23332750), (PMID:29111974)
GO_REF:0000033 		RGD
GO_Central		 PMID:14580349 PMID:15899866 PMID:23332750 PMID:29111974 GO_REF:0000033 NCBI chr 2:33,528,388...33,532,395
Ensembl chr 2:33,531,368...33,536,078 		JBrowse link
G Taf9b TATA-box binding protein associated factor 9b part_of ISO
IBA 		(PMID:15899866), (PMID:29111974)
GO_REF:0000033 		RGD
GO_Central		 PMID:15899866 PMID:29111974 GO_REF:0000033 NCBI chr  X:75,354,823...75,366,166
Ensembl chr  X:75,354,825...75,366,414 		JBrowse link
G Tbp TATA box binding protein part_of IDA
IEA
ISO 		GO_REF:0000107
(PMID:14580349), (PMID:23332750), (PMID:27007846), (PMID:27193682), (PMID:29111974), (PMID:7729427)
(PMID:28893950) 		Ensembl
RGD		 PMID:7729427 PMID:14580349 PMID:23332750 PMID:27007846 PMID:27193682 More... GO_REF:0000107, RGD:2306552 NCBI chr 1:65,136,420...65,153,515
Ensembl chr 1:65,136,448...65,190,899 		JBrowse link
G Tcea1 transcription elongation factor A1 part_of ISO
IBA 		(PMID:27193682)
GO_REF:0000033 		RGD
GO_Central		 PMID:27193682 GO_REF:0000033 NCBI chr 5:19,414,351...19,466,629
Ensembl chr15:12,831,339...12,834,156
Ensembl chr 5:12,831,339...12,834,156 		JBrowse link
transcription factor TFIIE complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2e1 general transcription factor IIE subunit 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:76,687,382...76,720,253
Ensembl chr11:76,687,772...76,720,784 		JBrowse link
G Gtf2e2 general transcription factor IIE subunit 2 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000104
GO_REF:0000002 		GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr16:65,102,386...65,152,563
Ensembl chr16:65,102,390...65,161,394 		JBrowse link
transcription factor TFIIF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000067613 part_of IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033
G Gtf2f1 general transcription factor IIF subunit 1 part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:11183778) 		GO_Central
Ensembl
RGD		 PMID:11183778 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:1,931,033...1,940,197
Ensembl chr 9:1,930,055...1,940,197 		JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 part_of IEA
ISO
IBA 		GO_REF:0000002
(PMID:11183778)
GO_REF:0000033 		InterPro
RGD
GO_Central		 PMID:11183778 GO_REF:0000002 GO_REF:0000033 NCBI chr15:57,615,361...57,736,477
Ensembl chr15:57,614,841...57,736,516 		JBrowse link
transcription factor TFIIH holo complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of ISS
ISO 		GO_REF:0000024
(PMID:9852112) 		UniProt
RGD		 PMID:9852112 GO_REF:0000024 NCBI chr 2:17,570,449...17,591,078
Ensembl chr 2:17,570,263...17,614,860 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 part_of IDA
IEA
ISO
ISS 		GO_REF:0000107
GO_REF:0000002
(PMID:9852112)
GO_REF:0000024 		Ensembl
InterPro
RGD
UniProt		 PMID:9852112 PMID:7553866 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:9590319 NCBI chr 2:33,574,623...33,599,485
Ensembl chr 2:33,574,623...33,599,485 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of ISO
IEA 		(PMID:9852112)
GO_REF:0000107 		RGD
Ensembl		 PMID:9852112 GO_REF:0000107 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:88,160,988...88,175,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of ISS
IBA
ISO 		GO_REF:0000024
GO_REF:0000033
(PMID:9852112) 		UniProt
GO_Central
RGD		 PMID:9852112 GO_REF:0000024 GO_REF:0000033 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:24,148,084...24,190,898 		JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 IDA RGD PMID:7553866 RGD:9590319 NCBI chr15:57,615,361...57,736,477
Ensembl chr15:57,614,841...57,736,516 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 part_of IDA
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:9852112) 		Ensembl
GO_Central
RGD		 PMID:9852112 PMID:7553866 GO_REF:0000033 GO_REF:0000107, RGD:9590319 NCBI chr 1:106,457,692...106,485,729
Ensembl chr 1:106,457,394...106,485,727 		JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 part_of ISS
IBA
ISO
IEA 		GO_REF:0000024
GO_REF:0000033
(PMID:9852112)
GO_REF:0000104 		UniProt
GO_Central
RGD		 PMID:9852112 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:33,358,863...33,386,726
Ensembl chr 2:33,358,869...33,386,688 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO
IEA
IBA
ISS 		(PMID:9852112)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000104
GO_REF:0000024 		RGD
Ensembl
GO_Central
UniProt		 PMID:9852112 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr12:37,669,995...37,687,505
Ensembl chr12:37,669,997...37,686,466 		JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 part_of ISO (PMID:9852112) RGD PMID:9852112 NCBI chr20:3,076,110...3,081,805
Ensembl chr20:3,076,088...3,081,760 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:49,061,904...49,068,612
Ensembl chr 1:49,061,959...49,070,039 		JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:32,830,827...32,831,042 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase part_of ISO
IEA
IBA 		(PMID:9852112)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
GO_REF:0000033 		RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:9852112 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:97,550,566...97,706,598
Ensembl chr 6:97,550,543...97,706,595 		JBrowse link
transcription factor TFIIK complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of IBA
ISO
IEA 		GO_REF:0000033
(PMID:23393140), (PMID:8692841)
GO_REF:0000002 		GO_Central
RGD
InterPro		 PMID:8692841 PMID:23393140 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:17,570,449...17,591,078
Ensembl chr 2:17,570,263...17,614,860 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 part_of IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000002
GO_REF:0000033
(PMID:23393140), (PMID:8692841) 		Ensembl
InterPro
GO_Central
RGD		 PMID:8692841 PMID:23393140 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:33,574,623...33,599,485
Ensembl chr 2:33,574,623...33,599,485 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase part_of ISO
IEA 		(PMID:8692841)
GO_REF:0000107 		RGD
Ensembl		 PMID:8692841 GO_REF:0000107 NCBI chr 6:97,550,566...97,706,598
Ensembl chr 6:97,550,543...97,706,595 		JBrowse link
transcription factor TFTC complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000068380 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Kat2a lysine acetyltransferase 2A part_of ISO
IEA 		(PMID:10373431)
GO_REF:0000107 		RGD
Ensembl		 PMID:10373431 GO_REF:0000107 NCBI chr10:86,132,535...86,140,877
Ensembl chr10:86,132,535...86,140,485 		JBrowse link
G Slc25a2 solute carrier family 25 member 2 part_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr18:29,704,182...29,707,563
Ensembl chr18:29,703,871...29,708,827 		JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component part_of ISO
IEA 		(PMID:10373431)
GO_REF:0000107 		RGD
Ensembl		 PMID:10373431 GO_REF:0000107 NCBI chr 9:23,375,889...23,704,229
Ensembl chr 9:23,376,136...23,704,466 		JBrowse link
G Tada3 transcriptional adaptor 3 part_of ISO
IEA 		(PMID:10373431)
GO_REF:0000107 		RGD
Ensembl		 PMID:10373431 GO_REF:0000107 NCBI chr 4:148,065,859...148,077,347
Ensembl chr 4:148,065,877...148,077,320 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 part_of ISO
IEA 		(PMID:10373431), (PMID:9603525)
GO_REF:0000107 		RGD
Ensembl		 PMID:9603525 PMID:10373431 GO_REF:0000107 NCBI chr 1:169,506,940...169,508,234
Ensembl chr 1:169,506,940...169,508,208 		JBrowse link
G Taf12 TATA-box binding protein associated factor 12 part_of ISO
IEA 		(PMID:9603525)
GO_REF:0000107 		RGD
Ensembl		 PMID:9603525 GO_REF:0000107 NCBI chr 5:149,756,826...149,772,886
Ensembl chr 5:149,753,105...149,774,315 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 part_of ISO
IEA 		(PMID:10373431)
GO_REF:0000107 		RGD
Ensembl		 PMID:10373431 GO_REF:0000107 NCBI chr 7:88,312,374...88,369,399
Ensembl chr 7:88,312,374...88,369,377 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 part_of ISO
IEA 		(PMID:10373431), (PMID:9603525)
GO_REF:0000107 		RGD
Ensembl		 PMID:9603525 PMID:10373431 GO_REF:0000107 NCBI chr 3:187,395,632...187,461,042
Ensembl chr 3:187,395,632...187,461,123 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 part_of ISO
IEA 		(PMID:10373431), (PMID:9603525)
GO_REF:0000107 		RGD
Ensembl		 PMID:9603525 PMID:10373431 GO_REF:0000107 NCBI chr 1:255,899,774...255,915,259
Ensembl chr 1:255,899,770...255,915,268 		JBrowse link
G Taf5l1 TATA-box binding protein associated factor 5 like 1 part_of ISO
IBA 		(PMID:10373431)
GO_REF:0000033 		RGD
GO_Central		 PMID:10373431 GO_REF:0000033 NCBI chr19:68,889,153...68,908,480
Ensembl chr19:68,889,158...68,908,466 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 part_of ISO
IEA 		(PMID:9603525)
GO_REF:0000107 		RGD
Ensembl		 PMID:9603525 GO_REF:0000107 NCBI chr12:22,169,570...22,178,031
Ensembl chr12:22,168,718...22,177,938 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 part_of ISO (PMID:9603525) RGD PMID:9603525 NCBI chr18:29,704,182...29,713,382
Ensembl chr18:29,705,920...29,712,712 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 part_of ISO
IBA 		(PMID:15899866)
GO_REF:0000033 		RGD
GO_Central		 PMID:15899866 GO_REF:0000033 NCBI chr 2:33,528,388...33,532,395
Ensembl chr 2:33,531,368...33,536,078 		JBrowse link
G Taf9b TATA-box binding protein associated factor 9b part_of ISO (PMID:15899866) RGD PMID:15899866 NCBI chr  X:75,354,823...75,366,166
Ensembl chr  X:75,354,825...75,366,414 		JBrowse link
G Trrap transformation/transcription domain-associated protein part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr12:14,851,758...14,941,444
Ensembl chr12:14,851,758...14,941,407 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21544
    protein-containing complex 6918
      nuclear protein-containing complex 1363
        nuclear DNA-directed RNA polymerase complex 104
          RNA polymerase I complex 17
          RNA polymerase II, core complex 19
          RNA polymerase II, holoenzyme + 79
          RNA polymerase III complex 23
          RNA polymerase IV complex 0
          RNA polymerase V complex 0
          alpha DNA polymerase:primase complex 5
Path 2
Term Annotations click to browse term
  cellular_component 21544
    protein-containing complex 6918
      catalytic complex 2002
        transferase complex 1048
          transferase complex, transferring phosphorus-containing groups 294
            RNA polymerase complex 111
              DNA-directed RNA polymerase complex 109
                nuclear DNA-directed RNA polymerase complex 104
                  RNA polymerase I complex 17
                  RNA polymerase II, core complex 19
                  RNA polymerase II, holoenzyme + 79
                  RNA polymerase III complex 23
                  RNA polymerase IV complex 0
                  RNA polymerase V complex 0
                  alpha DNA polymerase:primase complex 5
paths to the root