Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:biological process involved in intraspecies interaction between organisms
go back to main search page
Accession:GO:0051703 term browser browse the term
Definition:Any process in which an organism has an effect on an organism of the same species.
Synonyms:exact_synonym: intraspecies interaction between organisms;   intraspecies interaction with other organisms


show annotations for term's descendants           Sort by:
negative regulation of single-species biofilm formation in or on host organism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPIFA1 BPI fold containing family A member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:29,524,619...29,532,996
Ensembl chr20:30,642,191...30,649,515 		JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532 		JBrowse link
social behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:25556659) MGI PMID:25556659 NCBI chr16:69,994,926...70,242,659
Ensembl chr16:89,633,849...89,683,311 		JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:26501181) MGI PMID:26501181 NCBI chr19:38,854,243...38,882,034
Ensembl chr19:47,358,281...47,384,716 		JBrowse link
G ATXN1 ataxin 1 involved_in ISO (PMID:28288114) UniProt PMID:28288114 NCBI chr 6:16,155,049...16,952,827
Ensembl chr 6:16,526,563...16,548,566 		JBrowse link
G ATXN1L ataxin 1 like involved_in ISO (PMID:28288114) UniProt PMID:28288114 NCBI chr16:53,153,416...53,165,311 JBrowse link
G AVP arginine vasopressin ISO RGD PMID:18786571 RGD:2301929 NCBI chr20:3,169,094...3,172,900 JBrowse link
G AVPR1A arginine vasopressin receptor 1A involved_in ISO PMID:12887422 RGD
UniProt		 PMID:12887422 PMID:16154572 RGD:2300378 RGD:8553763 NCBI chr12:25,793,633...25,803,026
Ensembl chr12:26,065,882...26,075,972 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16794820) Ensembl
MGI		 PMID:16794820 GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27042284)
(PMID:24528488)		 Ensembl
MGI		 PMID:24528488 PMID:27042284 GO_REF:0000107 NCBI chr 9:90,296,199...90,499,503
Ensembl chr 9:118,646,433...118,792,727 		JBrowse link
G BRINP3 BMP/retinoic acid inducible neural specific 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27826231) MGI
Ensembl		 PMID:27826231 GO_REF:0000107 NCBI chr 1:165,586,510...165,972,173
Ensembl chr 1:169,873,541...170,258,015 		JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27602517) Ensembl
MGI		 PMID:27602517 GO_REF:0000107 NCBI chr14:2,202,847...2,274,012
Ensembl chr14:20,281,422...20,326,361 		JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12876201) MGI PMID:12876201 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361 		JBrowse link
G CIC capicua transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:39,156,204...39,183,498
Ensembl chr19:47,751,520...47,774,699 		JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12020865) Ensembl
MGI		 PMID:12020865 GO_REF:0000107 NCBI chr 8:5,587,875...5,606,883
Ensembl chr 8:1,658,694...1,700,754 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219 		JBrowse link
G DBH dopamine beta-hydroxylase ISO RGD PMID:15345906 RGD:5130765 NCBI chr 9:104,761,504...104,784,445
Ensembl chr 9:133,371,821...133,393,697 		JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,219,911...7,247,509
Ensembl chr17:7,207,483...7,235,985 		JBrowse link
G DRD1 dopamine receptor D1 ISO negative regulation RGD PMID:21557291 RGD:7248612 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257 		JBrowse link
G DSCAM DS cell adhesion molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:34848499) MGI
Ensembl		 PMID:34848499 GO_REF:0000107 NCBI chr21:26,366,295...27,192,617
Ensembl chr21:39,699,077...40,524,164 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14960015), (PMID:9298901) Ensembl
MGI		 PMID:9298901 PMID:14960015 GO_REF:0000107 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008 		JBrowse link
G EFR3B EFR3 homolog B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:38190534) MGI
Ensembl		 PMID:38190534 GO_REF:0000107 NCBI chr2A:25,035,897...25,159,074
Ensembl chr2A:25,174,016...25,251,617 		JBrowse link
G EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 involved_in ISO (PMID:17029989), (PMID:20347422), (PMID:23172145) UniProt PMID:17029989 PMID:20347422 PMID:23172145 NCBI chr10:66,879,744...66,903,027
Ensembl chr10:69,406,745...69,423,249 		JBrowse link
G EN1 engrailed homeobox 1 involved_in ISO (PMID:17267560) ParkinsonsUK-UCL PMID:17267560 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22411800) Ensembl
MGI		 PMID:22411800 GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:31853066) MGI PMID:31853066 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:17983671) MGI PMID:17983671 NCBI chr15:3,129,481...3,357,495
Ensembl chr15:23,981,359...24,058,357 		JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24952328) Ensembl
RGD
MGI		 PMID:24952328 PMID:33293518 GO_REF:0000107 RGD:158012686 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944 		JBrowse link
G GAREM2 GRB2 associated regulator of MAPK1 subtype 2 acts_upstream_of_or_within ISO (PMID:31718706) MGI PMID:31718706 NCBI chr2A:26,168,328...26,184,967 JBrowse link
G GNB1L G protein subunit beta 1 like acts_upstream_of_or_within ISO (PMID:16684884) MGI PMID:16684884 NCBI chr22:2,542,925...2,616,201
Ensembl chr22:18,222,195...18,289,580 		JBrowse link
G GNG8 G protein subunit gamma 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23836683) Ensembl
MGI		 PMID:23836683 GO_REF:0000107 NCBI chr19:43,626,498...43,637,618
Ensembl chr19:52,155,081...52,156,410 		JBrowse link
G GRID1 glutamate ionotropic receptor delta type subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:82,017,436...82,795,410
Ensembl chr10:85,586,147...86,353,410 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:10481908) MGI PMID:10481908 NCBI chr 9:108,198,350...108,228,887
Ensembl chr 9:137,168,722...137,197,382 		JBrowse link
G GRP gastrin releasing peptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,614,169...52,626,427
Ensembl chr18:55,942,263...55,953,188 		JBrowse link
G GRPR gastrin releasing peptide receptor involved_in ISO
IEA		 RGD
Ensembl		 PMID:17097693 GO_REF:0000107 RGD:1641840 NCBI chr  X:8,744,020...8,775,085
Ensembl chr  X:16,099,778...16,131,069 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:10196365) MGI PMID:10196365 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:9831177 RGD:1626662 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424 		JBrowse link
G KALRN kalirin RhoGEF kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19625617) Ensembl
MGI		 PMID:19625617 GO_REF:0000107 NCBI chr 3:121,138,136...121,828,723
Ensembl chr 3:128,225,413...128,720,441 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:15498462) MGI PMID:15498462 NCBI chr11:2,469,750...2,874,467 JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:31283873) MGI PMID:31283873 Ensembl chr20:61,325,365...61,395,266 JBrowse link
G LOC100994646 neuroligin-4, Y-linked involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:5,756,699...6,018,008 JBrowse link
G MAPK8IP2 mitogen-activated protein kinase 8 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,846,613...30,857,737
Ensembl chr22:49,957,769...49,966,986 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:16199017)
(PMID:18321864)		 RGD
MGI		 PMID:16199017 PMID:18321864 PMID:18614683 PMID:27313794 RGD:11568037 RGD:12789706 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15772095) Ensembl
MGI		 PMID:15772095 GO_REF:0000107 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:23027611 RGD:10041022 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G NEGR1 neuronal growth regulator 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:30932003) MGI
Ensembl		 PMID:30932003 GO_REF:0000107 NCBI chr 1:70,628,093...71,503,114
Ensembl chr 1:72,613,516...73,484,240 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NLGN2 neuroligin 2 involved_in ISO PMID:18550748 BHF-UCL PMID:18550748 RGD:8554527 NCBI chr17:7,438,853...7,454,014 JBrowse link
G NLGN3 neuroligin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17823315) Ensembl
MGI		 PMID:17823315 GO_REF:0000107 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526 		JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:5,756,699...6,018,008 JBrowse link
G NPAS4 neuronal PAS domain protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,778,329...61,784,010
Ensembl chr11:65,103,097...65,108,825 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11997145) Ensembl
MGI		 PMID:11997145 GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:17034946), (PMID:18057082), (PMID:19896112) BHF-UCL PMID:17034946 PMID:18057082 PMID:19896112 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277 		JBrowse link
G NRXN2 neurexin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:59,959,917...60,078,093
Ensembl chr11:63,303,659...63,409,687 		JBrowse link
G NRXN3 neurexin 3 involved_in ISO (PMID:22209245) BHF-UCL PMID:22209245 NCBI chr14:58,729,335...60,444,769
Ensembl chr14:78,002,036...79,619,696 		JBrowse link
G OPRM1 opioid receptor mu 1 ISO RGD PMID:32388931 RGD:401842392 NCBI chr 6:151,827,323...151,937,658
Ensembl chr 6:156,517,661...157,088,251 		JBrowse link
G OXT oxytocin/neurophysin I prepropeptide ISO RGD PMID:17540347 RGD:2304134 NCBI chr20:3,157,246...3,159,013 JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:17383105 RGD:2304140 NCBI chr 3:8,701,344...8,721,706 JBrowse link
G PCM1 pericentriolar material 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25697395) Ensembl
MGI		 PMID:25697395 GO_REF:0000107 NCBI chr 8:17,140,458...17,246,165
Ensembl chr 8:14,093,988...14,199,691 		JBrowse link
G PIANP PILR alpha associated neural protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31511635) MGI
Ensembl		 PMID:31511635 GO_REF:0000107 NCBI chr12:6,824,377...6,832,971
Ensembl chr12:6,742,251...6,748,741 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISO RGD PMID:15345906 RGD:5130765 NCBI chr17:17,618,399...17,620,691
Ensembl chr17:17,835,277...17,837,180 		JBrowse link
G PTCHD1 patched domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:15,929,619...15,991,194
Ensembl chr  X:23,305,555...23,366,273 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393), (PMID:19208814) CACAO PMID:16675393 PMID:19208814 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G RELN reelin ISO RGD PMID:20035841 RGD:2317761 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in ISO (PMID:33495318) UniProt PMID:33495318 NCBI chr17:74,973,420...75,389,339
Ensembl chr17:80,705,544...81,118,708 		JBrowse link
G SHANK1 SH3 and multiple ankyrin repeat domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:47,623,474...47,684,476
Ensembl chr19:56,526,577...56,580,442 		JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:29970986 GO_REF:0000107 RGD:126790534 NCBI chr11:65,570,677...66,268,139
Ensembl chr11:68,860,606...69,437,925 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:17173049), (PMID:21378602)
(PMID:21167025), (PMID:21423165), (PMID:21558424)
(PMID:21558424)
(PMID:31853066)		 BHF-UCL
CACAO
MGI		 PMID:17173049 PMID:21167025 PMID:21378602 PMID:21423165 PMID:21558424 More... NCBI chr22:30,951,866...30,973,608 JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:16684884) MGI PMID:16684884 NCBI chr22:2,521,080...2,541,267 JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:15345906 RGD:5130765 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:29752066) ARUK-UCL
Ensembl		 PMID:29752066 GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578 		JBrowse link
G TSC2 TSC complex subunit 2 ISO RGD PMID:20927644 RGD:11568683 NCBI chr16:615,776...655,411
Ensembl chr16:2,135,696...2,175,569 		JBrowse link
G UCN urocortin ISO negative regulation RGD PMID:16488545 RGD:5507822 NCBI chr2A:27,309,458...27,311,268
Ensembl chr2A:27,397,295...27,397,669 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29391390) MGI PMID:29391390 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15686477) Ensembl
MGI		 PMID:15686477 GO_REF:0000107 NCBI chr 9:47,424,921...47,668,150
Ensembl chr 9:76,032,286...76,269,636 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:37573958) MGI
Ensembl		 PMID:37573958 GO_REF:0000107 NCBI chr 8:95,659,443...96,525,316
Ensembl chr 8:97,860,720...98,698,271 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19380
    biological process involved in intraspecies interaction between organisms 77
      agglutination involved in conjugation with cellular fusion 0
      agglutination involved in conjugation with mutual genetic exchange 0
      flocculation + 0
      olfactory sociosexual communication 0
      pollen tube adhesion 0
      pollen tube reception 0
      single-species biofilm formation + 2
      social behavior + 75
      socially cooperative development + 0
paths to the root