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ONTOLOGY REPORT - ANNOTATIONS

Term:chiasma assembly
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Accession:GO:0051026 term browser browse the term
Definition:The cell cycle process in which a connection between chromatids assembles, indicating where an exchange of homologous segments has taken place by the crossing-over of non-sister chromatids.


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chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting DNA helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within
involved_in		 ISO MGI:3050548 (PMID:17784788)
(PMID:24390283)		 RGD PMID:17784788 PMID:24390283 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475 		JBrowse link
G Msh5 mutS homolog 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (PMID:24390283) RGD PMID:24390283 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831 		JBrowse link
G Rnf212b ring finger protein 212B involved_in ISO (PMID:38865271) RGD PMID:38865271 NCBI chr15:28,274,629...28,321,093
Ensembl chr15:28,244,083...28,321,347 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
MGI:109542 (PMID:22164254)		 Ensembl
GO_Central
RGD		 PMID:22164254 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within
involved_in		 ISO MGI:105931 (PMID:22164254)
(PMID:12004129)		 RGD PMID:12004129 PMID:22164254 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (PMID:18316482) RGD PMID:18316482 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:12556476) RGD PMID:12556476 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    reproductive process 1970
      meiotic cell cycle process 247
        chiasma assembly 9
Path 2
Term Annotations click to browse term
  biological_process 20536
    cellular process 19526
      metabolic process 12168
        primary metabolic process 10755
          nucleobase-containing compound metabolic process 5944
            nucleic acid metabolic process 5329
              DNA metabolic process 967
                DNA recombination 339
                  homologous recombination 56
                    reciprocal homologous recombination 55
                      reciprocal meiotic recombination 55
                        chiasma assembly 9
paths to the root