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ONTOLOGY REPORT - ANNOTATIONS

Term:quaternary ammonium group binding
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Accession:GO:0050997 term browser browse the term
Definition:Binding to a quaternary ammonium group, including glycine betaine, choline, carnitine and proline. A quaternary ammonium group is any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.
Synonyms:exact_synonym: quaternary amine binding


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quaternary ammonium group binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm3 cholinergic receptor, muscarinic 3 enables IDA 4-DAMP methiodide CHEBI:73340 RGD PMID:8075871 RGD:2303390 NCBI chr17:60,005,137...60,467,250
Ensembl chr17:60,005,202...60,467,278 		JBrowse link
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit IDA CHEBI:18723,CHEBI:3385 RGD PMID:15016836 RGD:2303194 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601 		JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit IDA CHEBI:18723,CHEBI:3385 RGD PMID:15016836 RGD:2303194 NCBI chr 3:168,136,246...168,157,839
Ensembl chr 3:168,136,266...168,156,957 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit IDA CHEBI:18723,CHEBI:3385 RGD PMID:15016836 RGD:2303194 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
phosphatidylcholine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 enables ISO (PMID:24097981) RGD PMID:24097981 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170 		JBrowse link
G Aldob aldolase, fructose-bisphosphate B IPI RGD PMID:9448062 RGD:2302096 NCBI chr 5:63,889,045...63,902,086
Ensembl chr 5:63,889,046...63,902,116 		JBrowse link
G Anxa13 annexin A13 NOT|enables ISO (PMID:15813707) RGD PMID:15813707 NCBI chr 7:89,884,356...89,936,907
Ensembl chr 7:89,884,356...89,936,907 		JBrowse link
G Apoa2 apolipoprotein A2 enables ISO (PMID:17264082) RGD PMID:17264082 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoa4 apolipoprotein A4 enables IEA
ISO		 GO_REF:0000107
(PMID:11940599), (PMID:1935934)		 Ensembl
RGD		 PMID:1935934 PMID:11940599 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Apoa5 apolipoprotein A5 enables ISO
IEA		 (PMID:16806135)
GO_REF:0000107		 RGD
Ensembl		 PMID:16806135 GO_REF:0000107 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816 		JBrowse link
G Chmp2a charged multivesicular body protein 2A enables ISO (PMID:18687924) RGD PMID:18687924 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp3 charged multivesicular body protein 3 enables ISO (PMID:18687924) RGD PMID:18687924 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959 		JBrowse link
G Esyt1 extended synaptotagmin 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:928,848...946,199
Ensembl chr 7:928,848...946,199 		JBrowse link
G Esyt2 extended synaptotagmin 2 enables ISO
IBA		 (PMID:24847877)
GO_REF:0000033		 RGD
GO_Central		 PMID:24847877 GO_REF:0000033 NCBI chr 6:137,219,653...137,312,590
Ensembl chr 6:137,219,707...137,312,590 		JBrowse link
G Esyt3 extended synaptotagmin 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:99,870,418...99,917,298
Ensembl chr 8:99,871,149...99,917,232 		JBrowse link
G Gpr119 G protein-coupled receptor 119 enables IBA
ISO		 GO_REF:0000033
(PMID:15607732)		 GO_Central
RGD		 PMID:15607732 GO_REF:0000033 NCBI chr  X:127,852,145...127,858,198
Ensembl chr  X:127,852,145...127,858,198 		JBrowse link
G Gpr12 G protein-coupled receptor 12 enables ISO (PMID:12574419) RGD PMID:12574419 NCBI chr12:8,522,709...8,525,875
Ensembl chr12:8,522,953...8,527,973 		JBrowse link
G Ighm immunoglobulin heavy constant epsilon enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 6:132,329,269...133,053,426 JBrowse link
G Jchain joining chain of multimeric IgA and IgM contributes_to ISO (PMID:21786026) RGD PMID:21786026 NCBI chr14:19,538,927...19,547,023
Ensembl chr14:19,538,952...19,546,298 		JBrowse link
G Nf1 neurofibromin 1 enables ISO
ISS		 (PMID:17187824)
GO_REF:0000024		 RGD
UniProt		 PMID:17187824 GO_REF:0000024 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Pctp phosphatidylcholine transfer protein enables ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:12055623)		 UniProt
GO_Central
RGD		 PMID:12055623 GO_REF:0000024 GO_REF:0000033 NCBI chr10:74,808,887...74,856,260
Ensembl chr10:74,808,887...74,849,867 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline enables IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:9224626 GO_REF:0000033, RGD:10449001 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935 		JBrowse link
G Pitpna phosphatidylinositol transfer protein, alpha enables IDA
ISO
IBA
IEA		 PMID:16274224
(PMID:8049244)
GO_REF:0000033
GO_REF:0000107
(PMID:14962392), (PMID:15522822), (PMID:16274224), (PMID:22822086)		 RGD
GO_Central
Ensembl		 PMID:8049244 PMID:14962392 PMID:15522822 PMID:16274224 PMID:22822086 More... GO_REF:0000033 GO_REF:0000107, RGD:13210550 NCBI chr10:60,430,712...60,473,564
Ensembl chr10:60,430,748...60,471,342 		JBrowse link
G Pitpnb phosphatidylinositol transfer protein, beta enables IDA
IBA
IEA
ISO		 PMID:16274224
GO_REF:0000033
GO_REF:0000107
(PMID:16274224)		 GO_Central
Ensembl
RGD		 PMID:16274224 PMID:16274224 GO_REF:0000033 GO_REF:0000107, RGD:13210550 NCBI chr12:45,249,308...45,298,388
Ensembl chr12:45,249,333...45,298,314 		JBrowse link
G Pitpnm1 phosphatidylinositol transfer protein, membrane-associated 1 enables ISO
IBA
IEA		 (PMID:22822086)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:22822086 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:201,394,099...201,407,523
Ensembl chr 1:201,394,149...201,407,522 		JBrowse link
G Pitpnm2 phosphatidylinositol transfer protein, membrane-associated 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:32,347,455...32,479,103
Ensembl chr12:32,380,805...32,479,102 		JBrowse link
G Pltp phospholipid transfer protein enables ISO (PMID:9132017) RGD PMID:9132017 NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 enables ISO
IEA		 (PMID:23908768)
GO_REF:0000107		 RGD
Ensembl		 PMID:23908768 GO_REF:0000107 NCBI chr 3:104,168,549...104,230,107
Ensembl chr 3:104,170,013...104,230,056 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rs1 retinoschisin 1 NOT|enables ISO (PMID:17325137) RGD PMID:17325137 NCBI chr  X:33,962,440...33,992,203
Ensembl chr  X:33,963,657...33,992,115 		JBrowse link
G Scarb2 scavenger receptor class B, member 2 enables IEA
ISO		 GO_REF:0000107
(PMID:29199275)		 Ensembl
RGD		 PMID:29199275 GO_REF:0000107 NCBI chr14:15,558,271...15,609,813
Ensembl chr14:15,558,236...15,609,813 		JBrowse link
G Serpina5 serpin family A member 5 enables ISO (PMID:9556620) RGD PMID:9556620 NCBI chr 6:123,009,224...123,028,412
Ensembl chr 6:123,023,306...123,028,407 		JBrowse link
G Sestd1 SEC14 and spectrin domain containing 1 NOT|enables ISO (PMID:20164195) RGD PMID:20164195 NCBI chr 3:62,123,590...62,220,759
Ensembl chr 3:62,129,887...62,220,546 		JBrowse link
G Vdac1 voltage-dependent anion channel 1 enables ISO (PMID:31015432) RGD PMID:31015432 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640 		JBrowse link
G Vdac2 voltage-dependent anion channel 2 enables ISS
ISO		 GO_REF:0000024
(PMID:31015432)		 UniProt
RGD		 PMID:31015432 GO_REF:0000024 NCBI chr15:2,462,877...2,476,802
Ensembl chr15:2,463,056...2,476,553 		JBrowse link
thiamine pyrophosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:72,355,201...72,406,725
Ensembl chr17:72,355,201...72,406,723 		JBrowse link
G Hacl1 2-hydroxyacyl-CoA lyase 1 enables IDA
IBA
IEA
ISO		 PMID:10468558
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:10468558), (PMID:21708296)		 GO_Central
Ensembl
InterPro
RGD		 PMID:10468558 PMID:21708296 PMID:10468558 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:708588 NCBI chr16:6,826,881...6,863,027
Ensembl chr16:6,824,906...6,863,027 		JBrowse link
G Ilvbl ilvB acetolactate synthase like enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924 		JBrowse link
G Ogdh oxoglutarate dehydrogenase enables ISO
IEA
ISS		 (PMID:24495017)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024		 RGD
Ensembl
InterPro
UniProt		 PMID:24495017 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
G Ogdhl oxoglutarate dehydrogenase L enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:7,578,343...7,604,385
Ensembl chr16:7,578,367...7,604,386 		JBrowse link
G Tkt transketolase enables IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16116031 GO_REF:0000033, RGD:1580394 NCBI chr16:5,723,764...5,748,702
Ensembl chr16:5,723,762...5,748,698 		JBrowse link
G Tktl1 transketolase-like 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:151,954,261...151,987,208
Ensembl chr  X:151,954,175...151,987,208 		JBrowse link
G Tktl2 transketolase-like 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:23,202,460...23,209,741
Ensembl chr16:23,202,453...23,209,742 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21086
    binding 18096
      small molecule binding 6428
        quaternary ammonium group binding 44
          hydroxyectoine binding 0
          phosphatidylcholine binding 32
          thiamine pyrophosphate binding 8
paths to the root