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ONTOLOGY REPORT - ANNOTATIONS


Term:synapse organization
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Accession:GO:0050808 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).
Synonyms:exact_synonym: synapse organisation
 related_synonym: synapse development;   synapse morphogenesis;   synapse organization and biogenesis


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synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrl2 adhesion G protein-coupled receptor L2 involved_in ISO (PMID:28972101) SynGO PMID:28972101 NCBI chrNW_004624742:15,590,828...16,129,074
Ensembl chrNW_004624742:15,590,485...15,745,707
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISO (PMID:24739570) SynGO PMID:24739570 NCBI chrNW_004624761:7,219,269...8,101,988
Ensembl chrNW_004624761:7,242,948...7,804,418
JBrowse link
G Ank3 ankyrin 3 acts_upstream_of_or_within ISO (PMID:15479642) MGI PMID:15479642 NCBI chrNW_004624791:3,299,287...3,633,631 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:27734846) SynGO PMID:27734846 NCBI chrNW_004624817:7,913,541...7,937,945
Ensembl chrNW_004624817:7,909,468...7,936,487
JBrowse link
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:7683393) MGI PMID:7683393 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Bsn bassoon presynaptic cytomatrix protein involved_in ISO PMID:23403927 UniProt PMID:23403927 RGD:8554101 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450
JBrowse link
G C1qa complement C1q A chain involved_in ISO (PMID:27033548) ARUK-UCL PMID:27033548 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G Caprin1 cell cycle associated protein 1 acts_upstream_of_or_within ISO (PMID:20861386) MGI PMID:20861386 NCBI chrNW_004624767:13,010,512...13,049,507
Ensembl chrNW_004624767:13,012,149...13,048,808
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105
JBrowse link
G Cbln2 cerebellin 2 precursor involved_in ISO (PMID:29691328) UniProt PMID:29691328 NCBI chrNW_004624806:8,371,966...8,381,908
Ensembl chrNW_004624806:8,371,995...8,380,059
JBrowse link
G Cd2ap CD2 associated protein involved_in ISO (PMID:31412248) SynGO PMID:31412248 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523
JBrowse link
G Chrd chordin involved_in ISO (PMID:17634368) MGI PMID:17634368 NCBI chrNW_004624730:72,201,239...72,209,843
Ensembl chrNW_004624730:72,201,644...72,209,843
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14622577) MGI
Ensembl
PMID:14622577 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Ctnnd2 catenin delta 2 involved_in ISO (PMID:25807484) UniProt PMID:25807484 NCBI chrNW_004624751:8,160,520...9,049,871
Ensembl chrNW_004624751:8,161,442...9,049,685
JBrowse link
G Dact1 dishevelled binding antagonist of beta catenin 1 acts_upstream_of_or_within ISO (PMID:20335472) MGI PMID:20335472 NCBI chrNW_004624884:3,733,648...3,750,207
Ensembl chrNW_004624884:3,739,334...3,948,621
JBrowse link
G Drp2 dystrophin related protein 2 ISO RGD PMID:11083927 RGD:632604 NCBI chrNW_004624902:1,270,925...1,313,122
Ensembl chrNW_004624902:1,270,959...1,313,097
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (PMID:16818724) MGI PMID:16818724 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Elfn1 extracellular leucine rich repeat and fibronectin type III domain containing 1 involved_in ISO (PMID:23042292) UniProt PMID:23042292 NCBI chrNW_004624740:27,088,407...27,141,492
Ensembl chrNW_004624740:27,092,255...27,141,459
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 ISO RGD PMID:12163476 RGD:1299401 NCBI chrNW_004624822:756,532...1,806,129
Ensembl chrNW_004624822:756,550...1,807,175
JBrowse link
G Flna filamin A involved_in ISO (PMID:26972007) SynGO PMID:26972007 NCBI chrNW_004624946:812,278...836,307
Ensembl chrNW_004624946:812,287...837,273
JBrowse link
G Get1 guided entry of tail-anchored proteins factor 1 acts_upstream_of_or_within ISO (PMID:27458190) MGI PMID:27458190 NCBI chrNW_004624745:24,625,206...24,635,129
Ensembl chrNW_004624745:24,627,526...24,635,159
JBrowse link
G Grm5 glutamate metabotropic receptor 5 involved_in ISO (PMID:24012003) ARUK-UCL PMID:24012003 NCBI chrNW_004624845:1,064,866...1,631,722
Ensembl chrNW_004624845:1,079,564...1,627,880
JBrowse link
G Klk8 kallikrein related peptidase 8 acts_upstream_of_or_within ISO (PMID:16537644) MGI PMID:16537644 NCBI chrNW_004624832:3,763,870...3,768,488
Ensembl chrNW_004624832:3,764,322...3,768,609
JBrowse link
G L1cam L1 cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009
JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:17189701) MGI PMID:17189701 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chrNW_004624750:1,190,712...1,524,051
Ensembl chrNW_004624750:1,286,336...1,527,159
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624826:3,541,291...3,689,039
Ensembl chrNW_004624826:3,543,191...3,689,062
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta involved_in ISO (PMID:25915474) ParkinsonsUK-UCL PMID:25915474 NCBI chrNW_004624760:8,701,204...8,772,147
Ensembl chrNW_004624760:8,698,139...8,772,147
JBrowse link
G LOC101715424 tubulin alpha-1B chain-like involved_in ISO (PMID:32184299) MGI PMID:32184299 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO PMID:17889837 UniProt PMID:17889837 RGD:8553452 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within ISO (PMID:16980967) MGI PMID:16980967 NCBI chrNW_004624783:7,934,627...7,937,723
Ensembl chrNW_004624783:7,934,791...8,122,933
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:21788371)
(PMID:19285470), (PMID:21818371)
MGI PMID:19285470 PMID:21788371 PMID:21818371 RGD:8554788 NCBI chrNW_004624749:22,695,726...22,698,161
Ensembl chrNW_004624749:22,695,241...22,698,604
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21788371)
PMID:19285470
MGI
Ensembl
PMID:19285470 PMID:21788371 GO_REF:0000107 RGD:8554788 NCBI chrNW_004624743:31,648,543...31,651,772
Ensembl chrNW_004624743:31,644,209...31,651,688
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO PMID:19285470 MGI PMID:19285470 RGD:8554788 NCBI chrNW_004624749:25,669,342...26,445,401
Ensembl chrNW_004624749:25,669,348...26,444,401
JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:17270732) ParkinsonsUK-UCL PMID:17270732 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:20,951,651...21,760,267
Ensembl chrNW_004624731:20,951,954...21,754,936
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (PMID:15316067) MGI PMID:15316067 NCBI chrNW_004624731:8,114,557...8,280,586
Ensembl chrNW_004624731:8,113,715...8,280,823
JBrowse link
G Nbea neurobeachin involved_in ISO (PMID:22109531) SynGO PMID:22109531 NCBI chrNW_004624776:1,784,253...2,502,324
Ensembl chrNW_004624776:1,784,133...2,502,864
JBrowse link
G Ncam2 neural cell adhesion molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:9,327,125...9,826,922
Ensembl chrNW_004624745:9,327,345...9,822,852
JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within ISO (PMID:15479642) MGI PMID:15479642 NCBI chrNW_004624807:6,097,507...6,260,880
Ensembl chrNW_004624807:6,103,524...6,226,583
JBrowse link
G Nlgn1 neuroligin 1 acts_upstream_of_or_within ISO PMID:15681343
(PMID:21788371)
MGI PMID:15681343 PMID:21788371 RGD:8553420 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO PMID:15681343
PMID:19285470
MGI PMID:15681343 PMID:19285470 RGD:8553420 RGD:8554788 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nlgn3 neuroligin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
PMID:15681343
(PMID:21788371)
Ensembl
MGI
PMID:15681343 PMID:21788371 GO_REF:0000107 RGD:8553420 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Nlgn4x neuroligin 4 X-linked involved_in ISO (PMID:15150161) UniProt PMID:15150161 NCBI chrNW_004624834:3,646,449...4,000,328 JBrowse link
G Nptn neuroplastin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24554721) Ensembl
MGI
PMID:24554721 GO_REF:0000107 NCBI chrNW_004624781:752,048...818,250
Ensembl chrNW_004624781:751,912...819,847
JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in ISO PMID:23403927 UniProt PMID:23403927 RGD:8554101 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:22645310) ParkinsonsUK-UCL PMID:22645310 NCBI chrNW_004624828:2,121,262...2,131,645
Ensembl chrNW_004624828:2,121,329...2,131,645
JBrowse link
G Ppfia1 PTPRF interacting protein alpha 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:16,905,196...17,024,407
Ensembl chrNW_004624767:16,905,115...17,023,118
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624837:627,484...1,116,597
Ensembl chrNW_004624837:629,302...1,111,081
JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:4,941,760...4,964,615
Ensembl chrNW_004624832:4,941,766...4,964,602
JBrowse link
G Ppfia4 PTPRF interacting protein alpha 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:7,757,385...7,807,797
Ensembl chrNW_004624807:7,759,616...7,793,560
JBrowse link
G Prrt1 proline rich transmembrane protein 1 acts_upstream_of_or_within ISO (PMID:29490264) MGI PMID:29490264 NCBI chrNW_004624754:24,165,085...24,168,614
Ensembl chrNW_004624754:24,164,871...24,168,614
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:24012003) ARUK-UCL PMID:24012003 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:16,386,437...16,441,341
Ensembl chrNW_004624754:16,386,296...16,440,681
JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO (PMID:22519304) SynGO PMID:22519304 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614
JBrowse link
G Rab39b RAB39B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624963:51,978...71,781
Ensembl chrNW_004624963:63,187...73,440
JBrowse link
G Sema3e semaphorin 3E involved_in ISO (PMID:22179111) UniProt PMID:22179111 NCBI chrNW_004624739:31,606,128...31,851,624
Ensembl chrNW_004624739:31,608,501...31,716,640
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624832:3,934,525...3,978,607
Ensembl chrNW_004624832:3,938,170...3,976,870
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624767:16,296,053...16,828,714
Ensembl chrNW_004624767:16,380,751...16,823,577
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:9,246,348...9,325,671
Ensembl chrNW_004624736:9,246,262...9,325,485
JBrowse link
G Slc6a1 solute carrier family 6 member 1 acts_upstream_of ISO (PMID:11742587) ARUK-UCL PMID:11742587 NCBI chrNW_004624943:632,534...662,924
Ensembl chrNW_004624943:631,632...662,902
JBrowse link
G Slc8a2 solute carrier family 8 member A2 acts_upstream_of_or_within ISO (PMID:29274751) ARUK-UCL PMID:29274751 NCBI chrNW_004624832:6,333,672...6,359,536
Ensembl chrNW_004624832:6,333,677...6,361,888
JBrowse link
G Slc8a3 solute carrier family 8 member A3 acts_upstream_of_or_within ISO (PMID:29274751) ARUK-UCL PMID:29274751 NCBI chrNW_004624734:30,889,302...31,033,098
Ensembl chrNW_004624734:30,888,952...31,031,975
JBrowse link
G Slc9a6 solute carrier family 9 member A6 acts_upstream_of_or_within ISO (PMID:24035762) MGI PMID:24035762 NCBI chrNW_004624808:11,107,125...11,157,913 JBrowse link
G Snca synuclein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20974939) TreeGrafter
MGI
PMID:20974939 GO_REF:0000118 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320
JBrowse link
G Sncb synuclein beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20974939) TreeGrafter
MGI
PMID:20974939 GO_REF:0000118 NCBI chrNW_004624733:13,506,181...13,513,979
Ensembl chrNW_004624733:13,506,180...13,513,712
JBrowse link
G Sncg synuclein gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20974939) Ensembl
MGI
TreeGrafter
PMID:20974939 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624841:192,396...196,568
Ensembl chrNW_004624841:192,398...196,064
JBrowse link
G Syn1 synapsin I ISO RGD PMID:22045728 RGD:13593565 NCBI chrNW_004624978:110,640...179,910
Ensembl chrNW_004624978:110,506...180,568
JBrowse link
G Tnr tenascin R acts_upstream_of_or_within ISO (PMID:16262627) MGI PMID:16262627 NCBI chrNW_004624771:6,291,202...6,725,737
Ensembl chrNW_004624771:6,519,091...6,717,947
JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO (PMID:16286931) MGI PMID:16286931 NCBI chrNW_004624760:3,479,028...3,536,612
Ensembl chrNW_004624760:3,498,692...3,532,011
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:16818724) MGI PMID:16818724 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:16818724) MGI PMID:16818724 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027
JBrowse link
AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within_positive_effect ISO (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Chrdl1 chordin like 1 involved_in ISO (PMID:30344043) MGI PMID:30344043 NCBI chrNW_004624803:5,011,132...5,144,899
Ensembl chrNW_004624803:5,010,746...5,144,989
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chrNW_004624749:25,669,342...26,445,401
Ensembl chrNW_004624749:25,669,348...26,444,401
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:21940442
(PMID:21940442)
(PMID:12796785)
BHF-UCL
CACAO
PMID:12796785 PMID:21940442 RGD:8553843 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21558424), (PMID:21795692) CACAO PMID:21558424 PMID:21795692 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
complement-mediated synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement C1q A chain involved_in ISO (PMID:18083105) ARUK-UCL PMID:18083105 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G C3 complement C3 involved_in ISO (PMID:18083105) ARUK-UCL PMID:18083105 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (PMID:22632727) ARUK-UCL PMID:22632727 NCBI chrNW_004624782:14,316,505...14,367,841
Ensembl chrNW_004624782:14,318,499...14,367,922
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:30548312) UniProt PMID:30548312 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231
JBrowse link
dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:23365224) MGI PMID:23365224 NCBI chrNW_004624771:3,160,528...3,280,860
Ensembl chrNW_004624771:3,160,224...3,278,787
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:23936366) MGI PMID:23936366 NCBI chrNW_004624767:1,761,983...1,874,534
Ensembl chrNW_004624767:1,761,733...1,874,534
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:31141683) MGI PMID:31141683 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Cttn cortactin acts_upstream_of_or_within ISO (PMID:23365224) MGI PMID:23365224 NCBI chrNW_004624767:16,842,341...16,884,449
Ensembl chrNW_004624767:16,847,459...16,880,183
JBrowse link
G Igf1r insulin like growth factor 1 receptor involved_in ISO PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809
JBrowse link
G Insr insulin receptor involved_in ISO PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chrNW_004624828:345,135...485,856
Ensembl chrNW_004624828:345,135...486,184
JBrowse link
G Itga3 integrin subunit alpha 3 acts_upstream_of_or_within ISO (PMID:23595732) MGI PMID:23595732 NCBI chrNW_004624795:6,062,438...6,092,556
Ensembl chrNW_004624795:6,062,290...6,092,557
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chrNW_004624804:8,655,762...8,664,599
Ensembl chrNW_004624804:8,655,777...8,664,600
JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chrNW_004624735:40,673,156...40,770,693 JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:9,880,773...9,895,270
Ensembl chrNW_004624752:9,880,670...9,895,230
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 acts_upstream_of_or_within ISO (PMID:21068316) MGI PMID:21068316 NCBI chrNW_004624732:6,421,061...6,672,724
Ensembl chrNW_004624732:6,421,066...6,672,213
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31980586) ARUK-UCL PMID:31980586 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231
JBrowse link
dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO (PMID:25851601) UniProt PMID:25851601 NCBI chrNW_004624764:6,874,453...6,891,952 JBrowse link
G Ctnnd2 catenin delta 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:8,160,520...9,049,871
Ensembl chrNW_004624751:8,161,442...9,049,685
JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (PMID:31600191) UniProt PMID:31600191 NCBI chrNW_004624745:31,528,577...31,642,469
Ensembl chrNW_004624745:31,528,642...31,640,306
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:21525273
(PMID:20952458)
BHF-UCL PMID:20952458 PMID:21525273 RGD:8554095 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:417,567...625,324
Ensembl chrNW_004624823:448,189...624,740
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO PMID:21670302 ParkinsonsUK-UCL PMID:21670302 RGD:10449514 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Epha5 EPH receptor A5 involved_in ISO PMID:20824214 UniProt PMID:20824214 RGD:8554330 NCBI chrNW_004624761:3,693,462...4,050,426
Ensembl chrNW_004624761:3,693,540...4,048,953
JBrowse link
G Ephb1 EPH receptor B1 involved_in
acts_upstream_of_or_within
ISO (PMID:14691139)
(PMID:17310244)
UniProt
MGI
PMID:14691139 PMID:17310244 NCBI chrNW_004624730:11,120,018...11,564,972
Ensembl chrNW_004624730:11,119,909...11,565,293
JBrowse link
G Ephb2 EPH receptor B2 involved_in
acts_upstream_of_or_within
ISO (PMID:14691139)
(PMID:17310244)
UniProt
MGI
PMID:14691139 PMID:17310244 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Ephb3 EPH receptor B3 involved_in ISO (PMID:14691139) UniProt PMID:14691139 NCBI chrNW_004624730:71,964,337...71,983,021
Ensembl chrNW_004624730:71,965,108...71,982,593
JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO (PMID:24113571) MGI PMID:24113571 NCBI chrNW_004624893:608,744...627,600
Ensembl chrNW_004624893:608,540...628,580
JBrowse link
G Myo5b myosin VB ISO RGD PMID:18984164 RGD:11533643 NCBI chrNW_004624778:13,352,285...13,740,621
Ensembl chrNW_004624778:13,347,705...13,740,767
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 involved_in ISO (PMID:25851601) UniProt PMID:25851601 NCBI chrNW_004624803:4,386,035...4,700,450
Ensembl chrNW_004624803:4,392,511...4,513,101
JBrowse link
G Prmt3 protein arginine methyltransferase 3 ISO RGD PMID:20647003 RGD:9491824 NCBI chrNW_004624766:11,669,732...11,797,133
Ensembl chrNW_004624766:11,670,108...11,795,272
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964), (PMID:21411674) CACAO PMID:18082964 PMID:21411674 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Septin7 septin 7 acts_upstream_of_or_within ISO (PMID:24113571) MGI PMID:24113571 NCBI chrNW_004624740:25,083,414...25,179,493 JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in ISO (PMID:18272690) BHF-UCL PMID:18272690 NCBI chrNW_004624832:3,934,525...3,978,607
Ensembl chrNW_004624832:3,938,170...3,976,870
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within
involved_in
ISO (PMID:21558424)
(PMID:21167025), (PMID:21423165), (PMID:21558424)
MGI
BHF-UCL
PMID:21167025 PMID:21423165 PMID:21558424 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO (PMID:25851601) UniProt PMID:25851601 NCBI chrNW_004624783:12,239,467...12,322,403
Ensembl chrNW_004624783:12,254,715...12,323,232
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) ParkinsonsUK-UCL PMID:21670302 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
G Znf365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624791:1,330,869...1,355,248
Ensembl chrNW_004624791:1,330,794...1,470,973
JBrowse link
dendritic spine organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ARF GTPase 1 involved_in ISO PMID:23889934 UniProt PMID:23889934 RGD:8553918 NCBI chrNW_004624937:857,795...871,089 JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:31141683) MGI PMID:31141683 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910
JBrowse link
G Lgmn legumain involved_in ISO (PMID:25326800) ARUK-UCL PMID:25326800 NCBI chrNW_004624734:9,207,496...9,240,026
Ensembl chrNW_004624734:9,204,790...9,240,309
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in ISO PMID:21252856 UniProt PMID:21252856 RGD:8554238 NCBI chrNW_004624752:9,880,773...9,895,270
Ensembl chrNW_004624752:9,880,670...9,895,230
JBrowse link
G Rph3a rabphilin 3A involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chrNW_004624747:19,439,365...19,657,865
Ensembl chrNW_004624747:19,441,226...19,495,798
JBrowse link
establishment of synaptic specificity at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chat choline O-acetyltransferase acts_upstream_of_or_within ISO (PMID:12533614) MGI PMID:12533614 NCBI chrNW_004624928:357,812...401,668
Ensembl chrNW_004624928:360,704...399,714
JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO
ISS
RGD
UniProt
PMID:12815704 GO_REF:0000024 RGD:1582330 NCBI chrNW_004624869:1,181,288...1,200,751
Ensembl chrNW_004624869:1,181,354...1,200,664
JBrowse link
G Gphn gephyrin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10531433) MGI
TreeGrafter
PMID:10531433 GO_REF:0000118 NCBI chrNW_004624734:33,871,664...34,483,770
Ensembl chrNW_004624734:33,870,997...34,483,508
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (PMID:24094106) UniProt PMID:24094106 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:31141683)
(PMID:23074245)
MGI PMID:23074245 PMID:31141683 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318
JBrowse link
G Lrrc4 leucine rich repeat containing 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16980967) TreeGrafter
MGI
PMID:16980967 GO_REF:0000118 NCBI chrNW_004624783:7,934,627...7,937,723
Ensembl chrNW_004624783:7,934,791...8,122,933
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:22960622)
(PMID:26440732)
ParkinsonsUK-UCL
ARUK-UCL
PMID:22960622 PMID:26440732 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nptn neuroplastin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24554721) MGI
Ensembl
PMID:24554721 GO_REF:0000107 NCBI chrNW_004624781:752,048...818,250
Ensembl chrNW_004624781:751,912...819,847
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (PMID:29981480) UniProt PMID:29981480 NCBI chrNW_004624752:473,451...498,555
Ensembl chrNW_004624752:469,973...498,729
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:27373832) UniProt PMID:27373832 NCBI chrNW_004624807:4,937,573...5,169,104
Ensembl chrNW_004624807:4,935,472...5,169,050
JBrowse link
excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29752066) ARUK-UCL PMID:29752066 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231
JBrowse link
gamma-aminobutyric acid receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glrb glycine receptor beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19723286) MGI
Ensembl
PMID:19723286 GO_REF:0000107 NCBI chrNW_004624848:1,301,051...1,383,931
Ensembl chrNW_004624848:1,298,174...1,384,513
JBrowse link
G Gphn gephyrin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19723286) TreeGrafter
MGI
PMID:19723286 GO_REF:0000118 NCBI chrNW_004624734:33,871,664...34,483,770
Ensembl chrNW_004624734:33,870,997...34,483,508
JBrowse link
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:4,194,321...4,222,400
Ensembl chrNW_004624731:4,194,321...4,222,105
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Shisa7 shisa family member 7 involved_in ISO (PMID:31601770) UniProt PMID:31601770 NCBI chrNW_004624832:1,898,049...1,909,155
Ensembl chrNW_004624832:1,900,580...1,909,125
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 acts_upstream_of_or_within
involved_in
ISO (PMID:29107521)
(PMID:15620359)
MGI
BHF-UCL
PMID:15620359 PMID:29107521 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:6,273,989...6,276,788
Ensembl chrNW_004624760:6,273,994...6,276,776
JBrowse link
glycine receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9812897) MGI
TreeGrafter
PMID:9812897 GO_REF:0000118 NCBI chrNW_004624734:33,871,664...34,483,770
Ensembl chrNW_004624734:33,870,997...34,483,508
JBrowse link
guanylate kinase-associated protein clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21558424) CACAO PMID:21558424 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor involved_in ISO (PMID:25534236), (PMID:30679375) UniProt PMID:25534236 PMID:30679375 NCBI chrNW_004624790:540,084...555,128
Ensembl chrNW_004624790:538,490...546,586
JBrowse link
G Clstn2 calsyntenin 2 involved_in ISO (PMID:26171716) UniProt PMID:26171716 NCBI chrNW_004624730:16,568,556...17,187,365
Ensembl chrNW_004624730:16,568,556...17,176,251
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (PMID:24094106) UniProt PMID:24094106 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:23074245)
(PMID:31141683)
MGI PMID:23074245 PMID:31141683 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624808:7,577,422...8,091,216
Ensembl chrNW_004624808:7,578,286...8,091,811
JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:27,708,364...27,763,824
Ensembl chrNW_004624733:27,708,271...27,763,523
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha2 involved_in ISO (PMID:27129275) UniProt PMID:27129275 NCBI chrNW_004624761:20,688,819...20,819,487
Ensembl chrNW_004624761:20,688,838...20,819,568
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:28,022,632...28,236,211
Ensembl chrNW_004624733:28,022,635...28,230,865
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 involved_in ISO (PMID:25489750)
(PMID:27129275)
UniProt PMID:25489750 PMID:27129275 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625
JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:27,506,827...27,593,750
Ensembl chrNW_004624733:27,504,660...27,594,039
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in ISO (PMID:30125937) UniProt PMID:30125937 NCBI chrNW_004624908:2,128,764...2,136,385
Ensembl chrNW_004624908:2,131,033...2,134,835
JBrowse link
G Lgi2 leucine rich repeat LGI family member 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:7,317,471...7,344,003
Ensembl chrNW_004624755:7,317,445...7,348,236
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) MGI PMID:23358245 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (PMID:22960622) ParkinsonsUK-UCL PMID:22960622 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in ISO (PMID:18815592) UniProt PMID:18815592 NCBI chrNW_004624767:19,953,746...19,959,472
Ensembl chrNW_004624767:19,954,323...19,959,360
JBrowse link
G Plxnb1 plexin B1 involved_in ISO (PMID:23699507), (PMID:29981480) UniProt PMID:23699507 PMID:29981480 NCBI chrNW_004624730:2,368,329...2,396,284
Ensembl chrNW_004624730:2,371,147...2,391,308
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:27373832) UniProt PMID:27373832 NCBI chrNW_004624807:4,937,573...5,169,104
Ensembl chrNW_004624807:4,935,472...5,169,050
JBrowse link
maintenance of postsynaptic density structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ARF GTPase 6 involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chrNW_004624731:18,880,065...18,883,456
Ensembl chrNW_004624731:18,882,690...18,883,217
JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 involved_in ISO (PMID:31068362) SynGO PMID:31068362 NCBI chrNW_004624764:16,597,719...17,179,729
Ensembl chrNW_004624764:16,600,854...17,179,612
JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISO (PMID:19229292) SynGO PMID:19229292 NCBI chrNW_004624767:2,173,774...2,210,304
Ensembl chrNW_004624767:2,173,272...2,210,279
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:10,087,866...10,185,004
Ensembl chrNW_004624816:10,164,666...10,184,994
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:34613779) SynGO PMID:34613779 NCBI chrNW_004624888:1,537,080...1,825,955
Ensembl chrNW_004624888:1,537,138...1,821,215
JBrowse link
G Psd pleckstrin and Sec7 domain containing involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chrNW_004624831:1,810,372...1,823,708
Ensembl chrNW_004624831:1,809,518...1,823,318
JBrowse link
maintenance of postsynaptic specialization structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISO (PMID:30792275) SynGO PMID:30792275 NCBI chrNW_004624761:7,219,269...8,101,988
Ensembl chrNW_004624761:7,242,948...7,804,418
JBrowse link
G Cadm1 cell adhesion molecule 1 involved_in ISO (PMID:21145003) SynGO PMID:21145003 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO PMID:21209184 SynGO PMID:21209184 RGD:13702189 NCBI chrNW_004624880:2,070,410...2,075,069
Ensembl chrNW_004624880:2,070,523...2,079,421
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO PMID:20935643 SynGO PMID:20935643 RGD:155230798 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO PMID:20935643 SynGO PMID:20935643 RGD:155230798 NCBI chrNW_004624849:1,895,378...1,952,755
Ensembl chrNW_004624849:1,895,914...1,952,665
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO PMID:24966368 SynGO PMID:24966368 RGD:13702374 NCBI chrNW_004624891:1,907,233...2,429,714
Ensembl chrNW_004624891:1,908,044...2,425,144
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 involved_in ISO (PMID:27565345) SynGO PMID:27565345 NCBI chrNW_004624754:23,367,585...23,396,643
Ensembl chrNW_004624754:23,366,912...23,396,575
JBrowse link
maintenance of presynaptic active zone structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon presynaptic cytomatrix protein involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:11,398,603...11,907,553
Ensembl chrNW_004624735:11,400,159...11,841,920
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:756,532...1,806,129
Ensembl chrNW_004624822:756,550...1,807,175
JBrowse link
G LOC106008950 protein piccolo-like involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624739:31,086,290...31,142,979 JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:11359932) MGI PMID:11359932 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129
JBrowse link
maintenance of synapse structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (PMID:25611509) MGI PMID:25611509 NCBI chrNW_004624753:26,284,931...26,980,937
Ensembl chrNW_004624753:26,287,621...26,980,325
JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in ISO (PMID:21236345) SynGO PMID:21236345 NCBI chrNW_004624822:31,175...74,252
Ensembl chrNW_004624822:33,880...74,308
JBrowse link
G C1ql1 complement C1q like 1 acts_upstream_of_or_within ISO (PMID:25611509) MGI PMID:25611509 NCBI chrNW_004624795:363,947...368,885
Ensembl chrNW_004624795:363,942...369,441
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105
JBrowse link
G Cbln2 cerebellin 2 precursor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624806:8,371,966...8,381,908
Ensembl chrNW_004624806:8,371,995...8,380,059
JBrowse link
G Cbln3 cerebellin 3 precursor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624820:8,084,910...8,090,580
Ensembl chrNW_004624820:8,085,705...8,087,053
JBrowse link
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:10,411,933...10,413,969
Ensembl chrNW_004624747:10,412,012...10,413,969
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:25951243), (PMID:31141683) MGI PMID:25951243 PMID:31141683 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Grn granulin precursor involved_in ISO (PMID:29398357) SynGO PMID:29398357 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165
JBrowse link
G L1cam L1 cell adhesion molecule involved_in ISO (PMID:30846310) SynGO PMID:30846310 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009
JBrowse link
G Plxna4 plexin A4 involved_in ISO (PMID:24831527) SynGO PMID:24831527 NCBI chrNW_004624783:3,831,320...4,292,594
Ensembl chrNW_004624783:3,658,835...4,285,638
JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in ISO (PMID:33667157) FlyBase PMID:33667157 NCBI chrNW_004624818:8,362,107...8,371,565
Ensembl chrNW_004624818:8,365,359...8,371,386
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (PMID:24831527) SynGO PMID:24831527 NCBI chrNW_004624739:32,104,014...32,426,980
Ensembl chrNW_004624739:32,105,824...32,309,271
JBrowse link
G Sort1 sortilin 1 involved_in ISO (PMID:29398357) SynGO PMID:29398357 NCBI chrNW_004624772:5,044,948...5,123,300
Ensembl chrNW_004624772:5,049,045...5,123,365
JBrowse link
modification of dendritic spine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624877:662,595...851,762
Ensembl chrNW_004624877:661,998...850,431
JBrowse link
G Synpo synaptopodin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624774:9,860,274...9,912,722
Ensembl chrNW_004624774:9,902,851...9,910,752
JBrowse link
modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3 ABI family member 3 involved_in ISO PMID:22485184 SynGO PMID:22485184 RGD:42721990 NCBI chrNW_004624795:5,448,375...5,455,784
Ensembl chrNW_004624795:5,448,618...5,455,539
JBrowse link
G Cabp1 calcium binding protein 1 involved_in ISO (PMID:29478916) SynGO PMID:29478916 NCBI chrNW_004624747:13,027,839...13,050,262
Ensembl chrNW_004624747:13,027,844...13,050,165
JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 involved_in ISO (PMID:36264429) SynGO PMID:36264429 NCBI chrNW_004624764:22,517,254...22,542,356
Ensembl chrNW_004624764:22,517,315...22,542,351
JBrowse link
G Cfl1 cofilin 1 involved_in ISO PMID:16025109 SynGO PMID:16025109 RGD:13702428 NCBI chrNW_004624767:20,574,884...20,578,413
Ensembl chrNW_004624767:20,574,966...20,579,796
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (PMID:15034585) SynGO PMID:15034585 NCBI chrNW_004624749:22,332,750...23,546,165
Ensembl chrNW_004624749:22,333,710...23,412,593
JBrowse link
G Cttn cortactin involved_in ISO PMID:14684878 SynGO PMID:14684878 RGD:13702237 NCBI chrNW_004624767:16,842,341...16,884,449
Ensembl chrNW_004624767:16,847,459...16,880,183
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (PMID:27829159) SynGO PMID:27829159 NCBI chrNW_004624784:7,093,457...7,178,448
Ensembl chrNW_004624784:7,094,736...7,175,072
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in ISO PMID:19890013 SynGO PMID:19890013 RGD:8553536 NCBI chrNW_004624804:8,655,762...8,664,599
Ensembl chrNW_004624804:8,655,777...8,664,600
JBrowse link
G Pfn1 profilin 1 involved_in ISO (PMID:26951674) SynGO PMID:26951674 NCBI chrNW_004624786:8,803,247...8,805,958
Ensembl chrNW_004624786:8,803,118...8,805,960
JBrowse link
G Pfn2 profilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:27,306,452...27,312,493
Ensembl chrNW_004624730:27,307,030...27,312,501
JBrowse link
G Sptb spectrin beta, erythrocytic involved_in ISO (PMID:21297961) SynGO PMID:21297961 NCBI chrNW_004624734:36,151,701...36,272,058
Ensembl chrNW_004624734:36,202,011...36,270,942
JBrowse link
G Wasf1 WASP family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624916:1,183,291...1,301,925
Ensembl chrNW_004624916:1,181,234...1,201,975
JBrowse link
G Wasf3 WASP family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624776:11,863,880...11,985,087
Ensembl chrNW_004624776:11,864,652...11,904,295
JBrowse link
modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in ISO (PMID:23739967) SynGO PMID:23739967 NCBI chrNW_004624877:662,595...851,762
Ensembl chrNW_004624877:661,998...850,431
JBrowse link
G Cttn cortactin involved_in ISO PMID:14684878 SynGO PMID:14684878 RGD:13702237 NCBI chrNW_004624767:16,842,341...16,884,449
Ensembl chrNW_004624767:16,847,459...16,880,183
JBrowse link
G Dlgap3 DLG associated protein 3 involved_in ISO (PMID:17713528) SynGO PMID:17713528 NCBI chrNW_004624764:17,901,517...18,009,485
Ensembl chrNW_004624764:17,900,199...17,957,401
JBrowse link
G Dlgap4 DLG associated protein 4 involved_in ISO (PMID:30664629) SynGO PMID:30664629 NCBI chrNW_004624842:2,993,115...3,174,815
Ensembl chrNW_004624842:2,991,683...3,174,743
JBrowse link
G Drd1 dopamine receptor D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G Filip1 filamin A interacting protein 1 involved_in ISO (PMID:25220605) SynGO PMID:25220605 NCBI chrNW_004624819:2,352,322...2,562,060
Ensembl chrNW_004624819:2,380,195...2,501,975
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624948:623,527...664,044
Ensembl chrNW_004624948:623,527...664,000
JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in ISO PMID:21555464 SynGO PMID:21555464 RGD:405650273 NCBI chrNW_004624786:974,785...1,001,810
Ensembl chrNW_004624786:974,876...997,956
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO PMID:21635779 SynGO PMID:21635779 RGD:13792519 NCBI chrNW_004624790:6,173,160...6,229,487
Ensembl chrNW_004624790:6,172,762...6,229,487
JBrowse link
modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgrmc1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chrNW_004624895:3,265,326...3,273,531
Ensembl chrNW_004624895:3,264,798...3,273,529
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO PMID:22960932 UniProt PMID:22960932 RGD:14397585 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
modification of synaptic structure, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 involved_in ISO PMID:19047646 SynGO PMID:19047646 RGD:405650393 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713
JBrowse link
multiple spine synapse organization, single dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (PMID:24487234) ARUK-UCL PMID:24487234 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Cfl1 cofilin 1 ISO RGD PMID:23974706 RGD:11570553 NCBI chrNW_004624767:20,574,884...20,578,413
Ensembl chrNW_004624767:20,574,966...20,579,796
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:22820466) ARUK-UCL PMID:22820466 NCBI chrNW_004624933:248,298...456,933
Ensembl chrNW_004624933:389,627...456,520
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO (PMID:22820466) ARUK-UCL PMID:22820466 NCBI chrNW_004624752:24,008,520...24,480,834
Ensembl chrNW_004624752:24,135,487...24,459,288
JBrowse link
G Prnp prion protein (Kanno blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:5,785,139...5,802,162
Ensembl chrNW_004624741:5,785,158...5,802,162
JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm3 dynamin 3 ISO RGD PMID:17880892 RGD:8553820 NCBI chrNW_004624771:9,247,463...9,838,276
Ensembl chrNW_004624771:9,247,218...9,838,254
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 ISO RGD PMID:20531346 RGD:11251757 NCBI chrNW_004624756:10,810,368...10,932,801
Ensembl chrNW_004624756:10,810,413...10,942,034
JBrowse link
G Efna1 ephrin A1 involved_in ISO (PMID:17143272) UniProt PMID:17143272 NCBI chrNW_004624885:2,382,712...2,388,805
Ensembl chrNW_004624885:2,383,045...2,389,107
JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISO (PMID:17143272) UniProt PMID:17143272 NCBI chrNW_004624843:5,558,053...5,648,869
Ensembl chrNW_004624843:5,557,839...5,648,871
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:23143522) BHF-UCL PMID:23143522 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (PMID:21808020) CACAO PMID:21808020 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Twf1 twinfilin actin binding protein 1 ISO RGD PMID:33963280 RGD:596938166 NCBI chrNW_004624816:8,765,937...8,780,301
Ensembl chrNW_004624816:8,765,922...8,778,396
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (PMID:35420982) UniProt PMID:35420982 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221
JBrowse link
G Ptpn13 protein tyrosine phosphatase non-receptor type 13 ISO RGD PMID:23769722 RGD:152975632 NCBI chrNW_004624872:3,183,381...3,406,339
Ensembl chrNW_004624872:3,226,000...3,405,805
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105
JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptn pleiotrophin ISO RGD PMID:7722643 RGD:9834945 NCBI chrNW_004624765:17,523,086...17,625,264
Ensembl chrNW_004624765:17,522,916...17,548,184
JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 ISO RGD PMID:26169356 RGD:11074527 NCBI chrNW_004624767:20,574,884...20,578,413
Ensembl chrNW_004624767:20,574,966...20,579,796
JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24259049) Alzheimers_University_of_Toronto PMID:24259049 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30902970) MGI
Ensembl
PMID:30902970 GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624791:11,313,139...11,316,998
Ensembl chrNW_004624791:11,313,142...11,315,982
JBrowse link
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd9 frizzled class receptor 9 involved_in ISO (PMID:24860427) UniProt PMID:24860427 NCBI chrNW_004624740:14,323,445...14,325,616
Ensembl chrNW_004624740:14,323,817...14,325,601
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 EPH receptor A7 involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chrNW_004624799:560,441...753,509
Ensembl chrNW_004624799:560,432...754,132
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 ISO RGD PMID:23358245 RGD:9743980 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206
JBrowse link
G Negr1 neuronal growth regulator 1 ISO RGD PMID:19711485 RGD:596948412 NCBI chrNW_004624742:24,054,340...24,881,716
Ensembl chrNW_004624742:24,054,701...24,877,957
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004624735:15,356,911...15,713,219
Ensembl chrNW_004624735:15,461,178...15,714,071
JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:27893610 RGD:243048440 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO RGD PMID:27893610 RGD:243048440 NCBI chrNW_004624874:4,234,640...5,359,333
Ensembl chrNW_004624874:4,949,538...5,357,690
JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18986540) BHF-UCL PMID:18986540 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288
JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624786:10,872,793...10,902,948
Ensembl chrNW_004624786:10,892,422...10,901,430
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISO (PMID:19900895) UniProt PMID:19900895 NCBI chrNW_004624795:3,453,525...3,457,618
Ensembl chrNW_004624795:3,453,591...3,457,625
JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23407945) Ensembl
MGI
PMID:23407945 GO_REF:0000107 NCBI chrNW_004624820:8,136,231...8,145,395
Ensembl chrNW_004624820:8,136,156...8,146,312
JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgrmc1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chrNW_004624895:3,265,326...3,273,531
Ensembl chrNW_004624895:3,264,798...3,273,529
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (PMID:12796785) BHF-UCL PMID:12796785 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (PMID:20534458) BHF-UCL PMID:20534458 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304
JBrowse link
neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:2917690) MGI PMID:2917690 NCBI chrNW_004624770:19,590,829...19,631,663
Ensembl chrNW_004624770:19,591,215...19,631,722
JBrowse link
G Agrn agrin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12165471) TreeGrafter
MGI
PMID:12165471 GO_REF:0000118 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 acts_upstream_of_or_within ISO (PMID:16321985) MGI PMID:16321985 NCBI chrNW_004624899:74,080...170,565 JBrowse link
G Ank3 ankyrin 3 ISO RGD PMID:12657669 RGD:6767302 NCBI chrNW_004624791:3,299,287...3,633,631 JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (PMID:6692971), (PMID:6692972), (PMID:7286424) MGI PMID:6692971 PMID:6692972 PMID:7286424 NCBI chrNW_004624807:9,560,004...9,618,942
Ensembl chrNW_004624807:9,559,954...9,619,132
JBrowse link
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 acts_upstream_of_or_within ISO (PMID:17320843) MGI PMID:17320843 NCBI chrNW_004624730:4,211,189...4,346,119
Ensembl chrNW_004624730:4,212,901...4,345,849
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO (PMID:17320843) MGI PMID:17320843 NCBI chrNW_004624866:4,973,087...5,287,477
Ensembl chrNW_004624866:4,973,207...5,281,746
JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 acts_upstream_of_or_within ISO (PMID:17320843) MGI PMID:17320843 NCBI chrNW_004624752:11,062,059...11,172,357
Ensembl chrNW_004624752:11,062,002...11,170,406
JBrowse link
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit acts_upstream_of_or_within ISO (PMID:9221765) MGI PMID:9221765 NCBI chrNW_004624787:11,933,927...11,950,017
Ensembl chrNW_004624787:11,934,433...11,950,005
JBrowse link
G Col4a1 collagen type IV alpha 1 chain acts_upstream_of_or_within ISO (PMID:17418794) MGI PMID:17418794 NCBI chrNW_004624793:2,325,104...2,426,814
Ensembl chrNW_004624793:2,325,128...2,426,817
JBrowse link
G Col4a5 collagen type IV alpha 5 chain acts_upstream_of_or_within ISO (PMID:17418794) MGI PMID:17418794 NCBI chrNW_004624803:7,509,877...7,916,365
Ensembl chrNW_004624803:7,511,041...7,916,031
JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO (PMID:18305234) ARUK-UCL PMID:18305234 NCBI chrNW_004624749:29,105,310...29,135,124
Ensembl chrNW_004624749:29,115,561...29,137,276
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:19038220) UniProt PMID:19038220 NCBI chrNW_004624824:2,215,337...2,259,696
Ensembl chrNW_004624824:2,214,240...2,259,696
JBrowse link
G Dok7 docking protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16794080) MGI
TreeGrafter
PMID:16794080 GO_REF:0000118 NCBI chrNW_004624755:24,454,458...24,478,257
Ensembl chrNW_004624755:24,457,652...24,478,250
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (PMID:12165471) MGI PMID:12165471 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:10655525) MGI PMID:10655525 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:17418794) MGI PMID:17418794 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529
JBrowse link
G Kalrn kalirin RhoGEF kinase acts_upstream_of_or_within ISO (PMID:23116210) MGI PMID:23116210 NCBI chrNW_004624731:54,934...756,707
Ensembl chrNW_004624731:121,122...752,942
JBrowse link
G Ky kyphoscoliosis peptidase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11136708) MGI
TreeGrafter
PMID:11136708 GO_REF:0000118 NCBI chrNW_004624730:10,908,558...10,955,497
Ensembl chrNW_004624730:10,908,923...10,955,472
JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:17418794), (PMID:7885444) MGI PMID:7885444 PMID:17418794 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:23222475)
(PMID:19346129), (PMID:23222475)
MGI PMID:19346129 PMID:23222475 NCBI chrNW_004624750:1,190,712...1,524,051
Ensembl chrNW_004624750:1,286,336...1,527,159
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:21159966) BHF-UCL PMID:21159966 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230
JBrowse link
G Musk muscle associated receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO (PMID:12165471)
(PMID:16794080)
(PMID:25537362)
RGD
MGI
UniProt
PMID:7546737 PMID:12165471 PMID:16794080 PMID:25537362 RGD:633425 NCBI chrNW_004624758:733,380...829,192
Ensembl chrNW_004624758:733,919...829,075
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19345204) MGI
TreeGrafter
PMID:19345204 GO_REF:0000118 NCBI chrNW_004624731:5,855,678...5,954,119
Ensembl chrNW_004624731:5,862,626...5,951,421
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624792:3,553,185...3,903,288
Ensembl chrNW_004624792:3,553,004...3,902,468
JBrowse link
G P2rx2 purinergic receptor P2X 2 acts_upstream_of_or_within ISO (PMID:17706883) MGI PMID:17706883 NCBI chrNW_004624747:28,019,305...28,023,558
Ensembl chrNW_004624747:28,020,652...28,023,392
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:12165471) MGI PMID:12165471 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918
JBrowse link
G Pdzrn3 PDZ domain containing ring finger 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:7,901,560...8,144,455
Ensembl chrNW_004624773:7,900,934...8,144,003
JBrowse link
G Ppfibp1 PPFIA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624935:392,353...594,642
Ensembl chrNW_004624935:392,351...523,832
JBrowse link
G Ppfibp2 PPFIA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:9,222,014...9,378,250
Ensembl chrNW_004624817:9,222,040...9,377,893
JBrowse link
G Rapsn receptor associated protein of the synapse involved_in ISO (PMID:8653787)
(PMID:14622576)
MGI PMID:8653787 PMID:14622576 NCBI chrNW_004624767:1,350,820...1,358,107
Ensembl chrNW_004624767:1,351,370...1,358,187
JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 acts_upstream_of_or_within ISO (PMID:21187406) MGI PMID:21187406 NCBI chrNW_004624818:7,604,854...7,616,457
Ensembl chrNW_004624818:7,605,105...7,616,282
JBrowse link
G Snta1 syntrophin alpha 1 acts_upstream_of_or_within ISO (PMID:10995443) MGI PMID:10995443 NCBI chrNW_004624842:5,805,409...5,834,553
Ensembl chrNW_004624842:5,805,342...5,834,022
JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (PMID:28237315) MGI PMID:28237315 NCBI chrNW_004624804:11,569,024...11,672,037
Ensembl chrNW_004624804:11,569,150...11,670,373
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within ISO (PMID:20962009) MGI PMID:20962009 NCBI chrNW_004624925:454,092...529,122
Ensembl chrNW_004624925:454,134...529,108
JBrowse link
G Tnc tenascin C involved_in
acts_upstream_of_or_within
ISO (PMID:9593587) ComplexPortal
MGI
PMID:9593587 NCBI chrNW_004624760:20,044,900...20,137,260
Ensembl chrNW_004624760:20,044,826...20,137,616
JBrowse link
G Unc13a unc-13 homolog A acts_upstream_of_or_within ISO (PMID:15988013) MGI PMID:15988013 NCBI chrNW_004624908:418,248...464,203 JBrowse link
G Unc13b unc-13 homolog B acts_upstream_of_or_within ISO (PMID:15988013) MGI PMID:15988013 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886
JBrowse link
G Utrn utrophin ISO RGD PMID:9604203 RGD:634446 NCBI chrNW_004624753:9,548,914...10,090,635
Ensembl chrNW_004624753:9,554,240...9,984,058
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein 1 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chrNW_004624795:1,470,234...1,482,066
Ensembl chrNW_004624795:1,470,760...1,481,973
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:25014022) MGI PMID:25014022 NCBI chrNW_004624877:3,293,980...3,328,337
Ensembl chrNW_004624877:3,292,244...3,328,660
JBrowse link
neurotransmitter-gated ion channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chrNW_004624749:25,669,342...26,445,401
Ensembl chrNW_004624749:25,669,348...26,444,401
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531
JBrowse link
NMDA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within_positive_effect ISO (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A ISO RGD PMID:18442977 RGD:7241017 NCBI chrNW_004624815:5,817,196...5,821,197
Ensembl chrNW_004624815:5,816,601...5,820,864
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:19450252 BHF-UCL PMID:19450252 RGD:8553605 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Reln reelin involved_in ISO (PMID:21664258) CACAO PMID:21664258 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21558424) CACAO PMID:21558424 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in ISO PMID:20083202 UniProt PMID:20083202 RGD:4107359 NCBI chrNW_004624872:1,215,698...1,264,723
Ensembl chrNW_004624872:1,233,797...1,264,722
JBrowse link
G Snx27 sorting nexin 27 ISO RGD PMID:25071192 RGD:13508620 NCBI chrNW_004624772:19,305,355...19,385,298
Ensembl chrNW_004624772:19,305,359...19,385,292
JBrowse link
G Ssh1 slingshot protein phosphatase 1 ISO RGD PMID:20442266 RGD:11535133 NCBI chrNW_004624747:12,017,371...12,081,452
Ensembl chrNW_004624747:12,019,702...12,081,354
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in ISO PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chrNW_004624769:22,078,361...22,151,679
Ensembl chrNW_004624769:22,080,073...22,151,626
JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:30206770 RGD:405650589 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354
JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035
JBrowse link
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 involved_in ISO (PMID:26683084) UniProt PMID:26683084 NCBI chrNW_004624756:14,663,114...14,850,132
Ensembl chrNW_004624756:14,737,054...14,850,708
JBrowse link
G Zmynd8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chrNW_004624790:7,473,739...7,611,612
Ensembl chrNW_004624790:7,493,066...7,611,485
JBrowse link
G Znf804a zinc finger protein 804A involved_in ISO PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chrNW_004624844:6,417,102...6,482,516 JBrowse link
positive regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 ISO RGD PMID:23441206 RGD:11530033 NCBI chrNW_004624762:8,282,415...8,339,818
Ensembl chrNW_004624762:8,281,433...8,339,830
JBrowse link
G Actr3 actin related protein 3 ISO RGD PMID:23441206 RGD:11530033 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Afdn afadin, adherens junction formation factor ISO RGD PMID:22948147 RGD:13838731 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15673667 RGD:9684988 NCBI chrNW_004624801:10,106,815...10,173,191
Ensembl chrNW_004624801:10,106,750...10,173,188
JBrowse link
G Camk2b calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chrNW_004624740:7,750,327...7,828,891
Ensembl chrNW_004624740:7,750,245...7,831,454
JBrowse link
G Caprin1 cell cycle associated protein 1 involved_in ISO (PMID:20516077) UniProt PMID:20516077 NCBI chrNW_004624767:13,010,512...13,049,507
Ensembl chrNW_004624767:13,012,149...13,048,808
JBrowse link
G Caprin2 caprin family member 2 involved_in ISO (PMID:20516077) UniProt PMID:20516077 NCBI chrNW_004624778:5,026,854...5,080,741
Ensembl chrNW_004624778:5,027,406...5,080,859
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO RGD PMID:18606847 RGD:11576294 NCBI chrNW_004624762:13,723,347...14,106,844
Ensembl chrNW_004624762:13,722,691...14,106,844
JBrowse link
G Cux2 cut like homeobox 2 involved_in ISO (PMID:20510857) UniProt PMID:20510857 NCBI chrNW_004624747:20,784,323...21,021,090 JBrowse link
G Dbn1 drebrin 1 involved_in ISO
IEA
RGD
TreeGrafter
PMID:19174472 GO_REF:0000118 RGD:10398809 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133
JBrowse link
G Dbnl drebrin like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:7,950,552...7,960,592
Ensembl chrNW_004624740:7,950,556...7,960,568
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chrNW_004624730:31,857,157...31,913,985
Ensembl chrNW_004624730:31,855,992...31,914,253
JBrowse link
G Dnm1l dynamin 1 like ISO RGD PMID:19605646 RGD:7800727 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chrNW_004624782:7,606,576...7,668,771
Ensembl chrNW_004624782:7,606,655...7,666,206
JBrowse link
G Ephb2 EPH receptor B2 ISO RGD PMID:21364901 RGD:127285794 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chrNW_004624787:266,027...1,489,032
Ensembl chrNW_004624787:268,829...1,291,144
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chrNW_004624804:8,655,762...8,664,599
Ensembl chrNW_004624804:8,655,777...8,664,600
JBrowse link
G Kalrn kalirin RhoGEF kinase acts_upstream_of_or_within ISO (PMID:19625617) MGI PMID:19625617 NCBI chrNW_004624731:54,934...756,707
Ensembl chrNW_004624731:121,122...752,942
JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in ISO (PMID:21852430) CACAO PMID:21852430 NCBI chrNW_004624934:1,145,982...1,220,177
Ensembl chrNW_004624934:1,146,000...1,215,922
JBrowse link
G Mapre3 microtubule associated protein RP/EB family member 3 ISO RGD PMID:31092585 RGD:597538596 NCBI chrNW_004624738:9,063,795...9,136,080
Ensembl chrNW_004624738:9,131,768...9,136,080
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate ISO RGD PMID:16202710 RGD:9685333 NCBI chrNW_004624856:4,966,545...4,970,226
Ensembl chrNW_004624856:4,967,732...4,969,754
JBrowse link
G Mfn1 mitofusin 1 ISO RGD PMID:19605646 RGD:7800727 NCBI chrNW_004624730:57,110,669...57,154,924
Ensembl chrNW_004624730:57,110,807...57,153,989
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:19605646 RGD:7800727 NCBI chrNW_004624818:1,041,371...1,065,061
Ensembl chrNW_004624818:1,041,369...1,065,023
JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:19605646 RGD:7800727 NCBI chrNW_004624730:63,911,066...63,994,886
Ensembl chrNW_004624730:63,911,066...63,995,596
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (PMID:23483716) CACAO PMID:23483716 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 ISO RGD PMID:18481281 RGD:7775053 NCBI chrNW_004624803:4,386,035...4,700,450
Ensembl chrNW_004624803:4,392,511...4,513,101
JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956
JBrowse link
G Reln reelin involved_in ISO (PMID:21852430)
(PMID:21664258), (PMID:21852430)
BHF-UCL
CACAO
PMID:21664258 PMID:21852430 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Slc30a1 solute carrier family 30 member 1 ISO RGD PMID:25319628 RGD:11057402 NCBI chrNW_004624771:17,262,933...17,269,795
Ensembl chrNW_004624771:17,262,866...17,270,340
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 ISO RGD PMID:31092585 RGD:597538596 NCBI chrNW_004624795:4,031,596...4,088,999
Ensembl chrNW_004624795:4,031,748...4,085,984
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chrNW_004624744:17,434,733...17,726,348
Ensembl chrNW_004624744:17,434,686...17,727,127
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO RGD PMID:16474385 RGD:10043325 NCBI chrNW_004624745:19,563,166...19,941,511
Ensembl chrNW_004624745:19,561,195...19,760,095
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (PMID:29981480) UniProt PMID:29981480 NCBI chrNW_004624885:1,470,666...1,493,634
Ensembl chrNW_004624885:1,470,525...1,495,369
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:38,455,821...38,502,864 JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) ParkinsonsUK-UCL PMID:21670302 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (PMID:35420982) UniProt PMID:35420982 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221
JBrowse link
G Sema4a semaphorin 4A involved_in ISO (PMID:29981480) UniProt PMID:29981480 NCBI chrNW_004624885:1,470,666...1,493,634
Ensembl chrNW_004624885:1,470,525...1,495,369
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (PMID:23699507)
(PMID:29981480)
UniProt PMID:23699507 PMID:29981480 NCBI chrNW_004624765:23,097,771...23,244,778
Ensembl chrNW_004624765:23,197,462...23,229,922
JBrowse link
positive regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctn1 dynactin subunit 1 involved_in ISO (PMID:18364389) ARUK-UCL PMID:18364389 NCBI chrNW_004624749:29,105,310...29,135,124
Ensembl chrNW_004624749:29,115,561...29,137,276
JBrowse link
G Slc18a3 solute carrier family 18 member A3 involved_in ISO (PMID:19635813) UniProt PMID:19635813 NCBI chrNW_004624928:403,114...405,560
Ensembl chrNW_004624928:403,503...405,095
JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 ISO RGD PMID:17626212 RGD:152995392 NCBI chrNW_004624786:10,297,795...10,304,363
Ensembl chrNW_004624786:10,297,807...10,304,473
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
positive regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24259049) ARUK-UCL PMID:24259049 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:22854782) UniProt PMID:22854782 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
positive regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISO (PMID:14622576)
(PMID:18848351), (PMID:18957220)
(PMID:8653787)
MGI PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786
JBrowse link
G Crk CRK proto-oncogene, adaptor protein involved_in ISO (PMID:18848351), (PMID:18957220)
(PMID:8653787)
(PMID:14622576)
MGI PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:14622576)
(PMID:18848351), (PMID:18957220)
(PMID:8653787)
MGI PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chrNW_004624945:734,532...767,184
Ensembl chrNW_004624945:734,532...767,168
JBrowse link
G Dok7 docking protein 7 involved_in ISO (PMID:8653787)
(PMID:14622576)
(PMID:18848351), (PMID:18957220)
MGI PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chrNW_004624755:24,454,458...24,478,257
Ensembl chrNW_004624755:24,457,652...24,478,250
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in ISO (PMID:14622576) MGI PMID:14622576 NCBI chrNW_004624793:12,595,521...12,870,803
Ensembl chrNW_004624793:12,592,574...12,796,155
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:18848351), (PMID:18957220)
(PMID:8653787)
(PMID:14622576), (PMID:18957220)
MGI PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
G Lrp5 LDL receptor related protein 5 NOT|involved_in ISO (PMID:18957220) UniProt PMID:18957220 NCBI chrNW_004624767:18,438,165...18,551,362
Ensembl chrNW_004624767:18,438,274...18,551,338
JBrowse link
G Mesd mesoderm development LRP chaperone involved_in ISO (PMID:24140340) UniProt PMID:24140340 NCBI chrNW_004624768:20,863,804...20,871,867
Ensembl chrNW_004624768:20,863,697...20,871,875
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in ISO (PMID:14622576), (PMID:18957220)
(PMID:18848351), (PMID:18957220)
(PMID:8653787)
UniProt
MGI
PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chrNW_004624758:733,380...829,192
Ensembl chrNW_004624758:733,919...829,075
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:7722643 RGD:9834945 NCBI chrNW_004624765:17,523,086...17,625,264
Ensembl chrNW_004624765:17,522,916...17,548,184
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:14622576) MGI PMID:14622576 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 ISO RGD PMID:18430734 RGD:2306201 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624735:14,049,621...14,126,287
Ensembl chrNW_004624735:14,050,213...14,113,534
JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624764:14,964,614...15,001,429
Ensembl chrNW_004624764:14,964,480...15,001,320
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624753:26,284,931...26,980,937
Ensembl chrNW_004624753:26,287,621...26,980,325
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624901:1,550,122...1,563,447
Ensembl chrNW_004624901:1,550,137...1,562,968
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624901:1,376,295...1,418,126
Ensembl chrNW_004624901:1,374,300...1,418,068
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624742:15,590,828...16,129,074
Ensembl chrNW_004624742:15,590,485...15,745,707
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624761:7,219,269...8,101,988
Ensembl chrNW_004624761:7,242,948...7,804,418
JBrowse link
G Adnp activity dependent neuroprotector homeobox ISO RGD PMID:15800376 RGD:2312779 NCBI chrNW_004624790:4,822,467...4,854,852
Ensembl chrNW_004624790:4,832,494...4,854,845
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624772:5,231,266...5,236,703
Ensembl chrNW_004624772:5,231,266...5,236,496
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chrNW_004624816:5,184,423...5,189,691
Ensembl chrNW_004624816:5,184,536...5,187,659
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624730:3,641,716...3,644,504
Ensembl chrNW_004624730:3,642,603...3,644,135
JBrowse link
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO (PMID:19571134) MGI PMID:19571134 NCBI chrNW_004624875:969,857...2,049,531
Ensembl chrNW_004624875:969,626...2,049,061
JBrowse link
G Bdnf brain derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21356198) MGI
Ensembl
PMID:21356198 GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within ISO (PMID:21356198) MGI PMID:21356198 NCBI chrNW_004624806:8,371,966...8,381,908
Ensembl chrNW_004624806:8,371,995...8,380,059
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) TreeGrafter
MGI
PMID:24613359 GO_REF:0000118 NCBI chrNW_004624730:16,568,556...17,187,365
Ensembl chrNW_004624730:16,568,556...17,176,251
JBrowse link
G Clstn3 calsyntenin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
TreeGrafter
PMID:24613359 GO_REF:0000118 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221
JBrowse link
G Cux2 cut like homeobox 2 involved_in ISO (PMID:20510857) UniProt PMID:20510857 NCBI chrNW_004624747:20,784,323...21,021,090 JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISO RGD PMID:26738857 RGD:243048441 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (PMID:25232112) UniProt PMID:25232112 NCBI chrNW_004624754:11,033,649...11,155,271
Ensembl chrNW_004624754:11,036,716...11,155,256
JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chrNW_004624782:7,606,576...7,668,771
Ensembl chrNW_004624782:7,606,655...7,666,206
JBrowse link
G Efna5 ephrin A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:25,336,851...25,611,698
Ensembl chrNW_004624743:25,341,132...25,611,564
JBrowse link
G Ephb1 EPH receptor B1 involved_in ISO (PMID:14691139) UniProt PMID:14691139 NCBI chrNW_004624730:11,120,018...11,564,972
Ensembl chrNW_004624730:11,119,909...11,565,293
JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (PMID:14691139)
(PMID:21029865)
RGD
UniProt
PMID:14691139 PMID:21029865 PMID:21364901 RGD:127285794 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Ephb3 EPH receptor B3 involved_in ISO (PMID:14691139) UniProt PMID:14691139 NCBI chrNW_004624730:71,964,337...71,983,021
Ensembl chrNW_004624730:71,965,108...71,982,593
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624767:22,167,309...22,248,680
Ensembl chrNW_004624767:22,169,616...22,189,578
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
Ensembl
PMID:24613359 GO_REF:0000107 NCBI chrNW_004624734:16,587,367...16,674,998
Ensembl chrNW_004624734:16,587,357...16,676,063
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chrNW_004624741:15,343,304...15,355,742
Ensembl chrNW_004624741:15,343,653...15,355,727
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16491079) MGI
Ensembl
PMID:16491079 GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:25908590) UniProt PMID:25908590 NCBI chrNW_004624730:66,491,230...66,625,642 JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:25908590) UniProt PMID:25908590 NCBI chrNW_004624787:266,027...1,489,032
Ensembl chrNW_004624787:268,829...1,291,144
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 ISO RGD PMID:26884337 RGD:11560558 NCBI chrNW_004624909:462,724...564,989
Ensembl chrNW_004624909:460,626...565,133
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624736:32,177,085...33,454,296
Ensembl chrNW_004624736:32,186,995...32,203,250
JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624772:19,470,853...19,474,959
Ensembl chrNW_004624772:19,472,576...19,476,708
JBrowse link
G LOC101706826 beta-catenin-interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:2,621,962...2,751,653
Ensembl chrNW_004624818:2,621,993...2,665,257
Ensembl chrNW_004624818:2,621,993...2,665,257
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624735:12,336,384...12,341,244
Ensembl chrNW_004624735:12,336,401...12,341,422
JBrowse link
G Lrrc26 leucine rich repeat containing 26 involved_in IEA UniProt
TreeGrafter
GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624760:774,137...777,095 JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:4,032,976...4,062,198
Ensembl chrNW_004624832:4,043,994...4,062,160
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624773:14,047,768...14,092,615
Ensembl chrNW_004624773:14,047,723...14,087,311
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
Ensembl
PMID:24613359 GO_REF:0000107 NCBI chrNW_004624739:18,733,055...18,772,468
Ensembl chrNW_004624739:18,735,922...18,772,465
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624749:22,695,726...22,698,161
Ensembl chrNW_004624749:22,695,241...22,698,604
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chrNW_004624743:31,648,543...31,651,772
Ensembl chrNW_004624743:31,644,209...31,651,688
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624754:1,348,448...1,499,649
Ensembl chrNW_004624754:1,348,129...1,496,259
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624749:25,669,342...26,445,401
Ensembl chrNW_004624749:25,669,348...26,444,401
JBrowse link
G Lrtm1 leucine rich repeats and transmembrane domains 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) TreeGrafter
MGI
PMID:24613359 GO_REF:0000118 NCBI chrNW_004624822:2,343,968...2,354,038
Ensembl chrNW_004624822:2,343,967...2,354,525
JBrowse link
G Lrtm2 leucine rich repeats and transmembrane domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) UniProt
TreeGrafter
MGI
PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624735:11,056,080...11,073,939
Ensembl chrNW_004624735:11,055,971...11,066,338
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
ISO PMID:17582332
(PMID:21356198)
PMID:15797875
(PMID:24613359)
BHF-UCL
MGI
PMID:15797875 PMID:17582332 PMID:21356198 PMID:24613359 RGD:8553502 RGD:8554205 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:15797875
(PMID:21642956)
BHF-UCL
CACAO
PMID:15797875 PMID:21642956 RGD:8554205 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Nrxn1 neurexin 1 acts_upstream_of_or_within ISO (PMID:21356198) MGI PMID:21356198 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624885:1,989,027...2,005,474
Ensembl chrNW_004624885:1,989,138...2,005,577
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624809:8,274,736...8,622,287
Ensembl chrNW_004624809:8,276,951...8,616,765
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601
JBrowse link
G Opcml opioid binding protein/cell adhesion molecule like ISO RGD PMID:19711485 RGD:596948412 NCBI chrNW_004624812:6,852,568...8,042,583
Ensembl chrNW_004624812:6,875,314...8,042,482
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide ISO RGD PMID:16488155 RGD:2304173 NCBI chrNW_004624741:4,200,594...4,201,416
Ensembl chrNW_004624741:4,200,478...4,201,580
JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:16488155 RGD:2304173 NCBI chrNW_004624731:3,367,645...3,384,815
Ensembl chrNW_004624731:3,370,701...3,385,640
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610
JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18073185 RGD:2293299 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172
JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (PMID:25908590), (PMID:25989451) UniProt PMID:25908590 PMID:25989451 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956
JBrowse link
G Slit2 slit guidance ligand 2 ISO RGD PMID:26738857 RGD:243048441 NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266
JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
TreeGrafter
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624751:16,635,950...16,638,771
Ensembl chrNW_004624751:16,636,183...16,638,273
JBrowse link
G Slitrk2 SLIT and NTRK like family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) TreeGrafter
Ensembl
MGI
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624808:1,307,229...1,319,063
Ensembl chrNW_004624808:1,311,247...1,319,087
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) TreeGrafter
MGI
UniProt
PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531
JBrowse link
G Slitrk4 SLIT and NTRK like family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
TreeGrafter
MGI
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624808:3,516,053...3,527,915
Ensembl chrNW_004624808:3,516,092...3,523,455
JBrowse link
G Slitrk5 SLIT and NTRK like family member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) UniProt
TreeGrafter
MGI
PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624779:5,382,712...5,390,490
Ensembl chrNW_004624779:5,382,466...5,390,079
JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) UniProt
MGI
TreeGrafter
PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624779:7,030,017...7,036,581
Ensembl chrNW_004624779:7,030,395...7,036,108
JBrowse link
G Srpx2 sushi repeat containing protein X-linked 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624902:1,944,073...1,967,106
Ensembl chrNW_004624902:1,944,019...1,964,983
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO RGD PMID:16887122 RGD:27372880 NCBI chrNW_004624768:11,238,134...11,302,280
Ensembl chrNW_004624768:11,234,281...11,302,237
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chrNW_004624744:17,434,733...17,726,348
Ensembl chrNW_004624744:17,434,686...17,727,127
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624939:560,192...698,100
Ensembl chrNW_004624939:560,106...661,570
JBrowse link
G Thbs2 thrombospondin 2 ISO RGD PMID:15707899 RGD:1580068 NCBI chrNW_004624850:5,072,070...5,104,865
Ensembl chrNW_004624850:5,071,512...5,105,074
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624799:12,226,350...12,325,178
Ensembl chrNW_004624799:12,226,350...12,230,701
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004624735:7,431,955...7,464,698
Ensembl chrNW_004624735:7,432,078...7,464,672
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:18986540)
(PMID:9405095)
BHF-UCL
MGI
PMID:9405095 PMID:18986540 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
positive regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc2 anaphase promoting complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:760,815...772,116
Ensembl chrNW_004624760:760,749...772,855
JBrowse link
G Camk2b calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chrNW_004624740:7,750,327...7,828,891
Ensembl chrNW_004624740:7,750,245...7,831,454
JBrowse link
G Cdc20 cell division cycle 20 involved_in ISO (PMID:19900895) UniProt PMID:19900895 NCBI chrNW_004624892:2,675,980...2,679,709
Ensembl chrNW_004624892:2,675,754...2,679,793
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:23326475) UniProt PMID:23326475 NCBI chrNW_004624760:13,472,500...13,658,070
Ensembl chrNW_004624760:13,472,672...13,657,930
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22153079) UniProt PMID:22153079 NCBI chrNW_004624831:2,717,184...2,778,907
Ensembl chrNW_004624831:2,717,226...2,778,977
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISO (PMID:16504944) UniProt PMID:16504944 NCBI chrNW_004624795:3,453,525...3,457,618
Ensembl chrNW_004624795:3,453,591...3,457,625
JBrowse link
G Nrxn1 neurexin 1 acts_upstream_of_or_within ISO (PMID:19567877) MGI PMID:19567877 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Reln reelin involved_in ISO (PMID:17229826) BHF-UCL PMID:17229826 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:33097708) ARUK-UCL PMID:33097708 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231
JBrowse link
positive regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk1 calcium/calmodulin dependent protein kinase I involved_in ISO (PMID:18184567) UniProt PMID:18184567 NCBI chrNW_004624731:4,388,373...4,399,762
Ensembl chrNW_004624731:4,383,927...4,399,369
JBrowse link
G Cdc42 cell division cycle 42 ISO RGD PMID:21423166 RGD:5688281 NCBI chrNW_004624764:6,874,453...6,891,952 JBrowse link
G Frmpd4 FERM and PDZ domain containing 4 involved_in ISO (PMID:19118189) UniProt PMID:19118189 NCBI chrNW_004624882:1,554,597...2,152,481
Ensembl chrNW_004624882:1,552,801...2,150,894
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21167025) BHF-UCL PMID:21167025 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISO (PMID:10402191) UniProt PMID:10402191 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Musk muscle associated receptor tyrosine kinase ISO RGD PMID:14749715 RGD:2317108 NCBI chrNW_004624758:733,380...829,192
Ensembl chrNW_004624758:733,919...829,075
JBrowse link
postsynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 involved_in ISO (PMID:15572692) SynGO PMID:15572692 NCBI chrNW_004624765:12,971,867...13,091,446
Ensembl chrNW_004624765:12,998,315...13,091,370
JBrowse link
G Actr3 actin related protein 3 involved_in ISO PMID:18430734 SynGO PMID:18430734 RGD:2306201 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 involved_in ISO (PMID:21123580) SynGO PMID:21123580 NCBI chrNW_004624781:13,195,390...13,321,823
Ensembl chrNW_004624781:13,195,755...13,321,823
JBrowse link
G Arhgap39 Rho GTPase activating protein 39 involved_in ISO (PMID:24656827) SynGO PMID:24656827 NCBI chrNW_004624735:12,236,219...12,334,461
Ensembl chrNW_004624735:12,236,122...12,334,404
JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO PMID:27798233 SynGO PMID:27798233 RGD:405650378 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069
JBrowse link
G Cnksr2 connector enhancer of kinase suppressor of Ras 2 involved_in ISO PMID:24656827 SynGO PMID:24656827 RGD:11533581 NCBI chrNW_004624829:6,286,716...6,556,757
Ensembl chrNW_004624829:6,286,259...6,556,757
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (PMID:25232112) SynGO PMID:25232112 NCBI chrNW_004624754:11,033,649...11,155,271
Ensembl chrNW_004624754:11,036,716...11,155,256
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:21670302) SynGO PMID:21670302 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Fzd9 frizzled class receptor 9 involved_in ISO PMID:27402827 SynGO PMID:27402827 RGD:13702305 NCBI chrNW_004624740:14,323,445...14,325,616
Ensembl chrNW_004624740:14,323,817...14,325,601
JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in ISO PMID:28663723 SynGO PMID:28663723 RGD:155230757 NCBI chrNW_004624747:22,876,183...22,897,557
Ensembl chrNW_004624747:22,876,276...22,896,584
JBrowse link
G Iqsec3 IQ motif and Sec7 domain ArfGEF 3 involved_in ISO PMID:27002143 SynGO PMID:27002143 RGD:11564746 NCBI chrNW_004624735:8,333,560...8,437,208
Ensembl chrNW_004624735:8,333,613...8,434,127
JBrowse link
G Itga3 integrin subunit alpha 3 involved_in ISO (PMID:29091766) SynGO PMID:29091766 NCBI chrNW_004624795:6,062,438...6,092,556
Ensembl chrNW_004624795:6,062,290...6,092,557
JBrowse link
G Lama5 laminin subunit alpha 5 involved_in ISO (PMID:29091766) SynGO PMID:29091766 NCBI chrNW_004624741:28,156,956...28,217,133
Ensembl chrNW_004624741:28,157,172...28,217,113
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:16540575) SynGO PMID:16540575 NCBI chrNW_004624805:8,438,485...8,574,845
Ensembl chrNW_004624805:8,438,498...8,574,508
JBrowse link
G Septin7 septin 7 involved_in ISO PMID:17935993 SynGO PMID:17935993 RGD:13702447 NCBI chrNW_004624740:25,083,414...25,179,493 JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 involved_in ISO (PMID:22090485) SynGO PMID:22090485 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650
JBrowse link
G Stk38 serine/threonine kinase 38 involved_in ISO PMID:22445341 SynGO PMID:22445341 RGD:11534980 NCBI chrNW_004624754:21,220,121...21,271,065
Ensembl chrNW_004624754:21,227,417...21,271,964
JBrowse link
G Stk38l serine/threonine kinase 38 like involved_in ISO PMID:22445341 SynGO PMID:22445341 RGD:11534980 NCBI chrNW_004624750:50,591...134,481 JBrowse link
G Wasf2 WASP family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,292,677...11,392,202
Ensembl chrNW_004624764:11,292,272...11,383,386
JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO PMID:18430734 SynGO PMID:18430734 RGD:2306201 NCBI chrNW_004624783:12,239,467...12,322,403
Ensembl chrNW_004624783:12,254,715...12,323,232
JBrowse link
postsynaptic actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 involved_in ISO (PMID:15572692) SynGO PMID:15572692 NCBI chrNW_004624765:12,971,867...13,091,446
Ensembl chrNW_004624765:12,998,315...13,091,370
JBrowse link
G Actr3 actin related protein 3 involved_in ISO PMID:18430734 SynGO PMID:18430734 RGD:2306201 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO PMID:23595754 SynGO PMID:23595754 RGD:13831359 NCBI chrNW_004624735:14,049,621...14,126,287
Ensembl chrNW_004624735:14,050,213...14,113,534
JBrowse link
G Arf1 ARF GTPase 1 involved_in ISO PMID:23889934 SynGO PMID:23889934 RGD:8553918 NCBI chrNW_004624937:857,795...871,089 JBrowse link
G Arhgef7 Rho guanine nucleotide exchange factor 7 involved_in ISO PMID:25284783 SynGO PMID:25284783 RGD:13702191 NCBI chrNW_004624793:1,880,681...1,995,604
Ensembl chrNW_004624793:1,880,382...1,995,610
JBrowse link
G Cpne6 copine 6 involved_in ISO (PMID:27194588) SynGO PMID:27194588 NCBI chrNW_004624820:8,451,588...8,458,871
Ensembl chrNW_004624820:8,448,469...8,458,884
JBrowse link
G Dbn1 drebrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133
JBrowse link
G Dbnl drebrin like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:7,950,552...7,960,592
Ensembl chrNW_004624740:7,950,556...7,960,568
JBrowse link
G Ezr ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624929:827,275...873,743
Ensembl chrNW_004624929:826,531...873,572
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in ISO PMID:23209303 SynGO PMID:23209303 RGD:8554251 NCBI chrNW_004624793:12,595,521...12,870,803
Ensembl chrNW_004624793:12,592,574...12,796,155
JBrowse link
G Frmpd4 FERM and PDZ domain containing 4 involved_in ISO PMID:19118189 SynGO PMID:19118189 RGD:13702196 NCBI chrNW_004624882:1,554,597...2,152,481
Ensembl chrNW_004624882:1,552,801...2,150,894
JBrowse link
G Myh10 myosin heavy chain 10 involved_in ISO (PMID:25220605) SynGO PMID:25220605 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A involved_in ISO PMID:15473970 SynGO PMID:15473970 RGD:10043779 NCBI chrNW_004624813:1,587,567...1,951,620
Ensembl chrNW_004624813:1,588,261...1,945,788
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO PMID:25284783 SynGO PMID:25284783 RGD:13702191 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025
JBrowse link
G Rac3 Rac family small GTPase 3 involved_in ISO (PMID:21297961) SynGO PMID:21297961 NCBI chrNW_004624801:10,862,490...10,864,856
Ensembl chrNW_004624801:10,862,502...10,864,879
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:18718479) SynGO PMID:18718479 NCBI chrNW_004624865:4,461,200...4,591,309
Ensembl chrNW_004624865:4,461,215...4,588,836
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO (PMID:25771685) SynGO PMID:25771685 NCBI chrNW_004624736:21,554,950...21,715,522
Ensembl chrNW_004624736:21,554,969...21,716,877
JBrowse link
G Sipa1l1 signal induced proliferation associated 1 like 1 involved_in ISO PMID:11502259 SynGO PMID:11502259 RGD:8554032 NCBI chrNW_004624734:29,612,867...29,998,602
Ensembl chrNW_004624734:29,611,978...29,914,317
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in ISO (PMID:25771685) SynGO PMID:25771685 NCBI chrNW_004624795:4,031,596...4,088,999
Ensembl chrNW_004624795:4,031,748...4,085,984
JBrowse link
G Wasf2 WASP family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,292,677...11,392,202
Ensembl chrNW_004624764:11,292,272...11,383,386
JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO PMID:18430734 SynGO PMID:18430734 RGD:2306201 NCBI chrNW_004624783:12,239,467...12,322,403
Ensembl chrNW_004624783:12,254,715...12,323,232
JBrowse link
postsynaptic cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cit citron rho-interacting serine/threonine kinase ISO RGD PMID:9870942 RGD:70684 NCBI chrNW_004624747:13,749,126...13,918,222
Ensembl chrNW_004624747:13,750,283...13,915,715
JBrowse link
G Enah ENAH actin regulator involved_in ISO PMID:16376568 SynGO PMID:16376568 RGD:405650240 NCBI chrNW_004624835:6,292,808...6,442,349 JBrowse link
G Kif2c kinesin family member 2C involved_in ISO (PMID:35138249) SynGO PMID:35138249 NCBI chrNW_004624906:633,635...660,149
Ensembl chrNW_004624906:633,754...660,254
JBrowse link
postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1ql2 complement C1q like 2 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624732:26,031,010...26,034,163
Ensembl chrNW_004624732:26,032,021...26,034,552
JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624796:11,239,297...11,246,800
Ensembl chrNW_004624796:11,239,077...11,248,111
JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 involved_in ISO (PMID:31068362) SynGO PMID:31068362 NCBI chrNW_004624764:16,597,719...17,179,729
Ensembl chrNW_004624764:16,600,854...17,179,612
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in ISO PMID:29024665 SynGO PMID:29024665 RGD:13702141 NCBI chrNW_004624801:9,628,878...9,637,869
Ensembl chrNW_004624801:9,628,882...9,637,859
JBrowse link
G Nrxn3 neurexin 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624734:22,161,837...23,757,367
Ensembl chrNW_004624734:22,163,166...23,692,660
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO PMID:21262467 SynGO PMID:21262467 RGD:13702219 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964) CACAO PMID:18082964 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Reln reelin involved_in ISO (PMID:21664258) BHF-UCL PMID:21664258 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21423165) BHF-UCL PMID:21423165 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531
JBrowse link
postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein 1 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chrNW_004624795:1,470,234...1,482,066
Ensembl chrNW_004624795:1,470,760...1,481,973
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Tmem108 transmembrane protein 108 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:9,314,308...9,683,324
Ensembl chrNW_004624730:9,522,166...9,683,365
JBrowse link
postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cit citron rho-interacting serine/threonine kinase ISO RGD PMID:9870942 RGD:70684 NCBI chrNW_004624747:13,749,126...13,918,222
Ensembl chrNW_004624747:13,750,283...13,915,715
JBrowse link
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16980967) MGI
TreeGrafter
PMID:16980967 GO_REF:0000118 NCBI chrNW_004624783:7,934,627...7,937,723
Ensembl chrNW_004624783:7,934,791...8,122,933
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:19450252
(PMID:12796785), (PMID:15620359), (PMID:20869594)
PMID:12930820
BHF-UCL
CACAO
PMID:12796785 PMID:12930820 PMID:15620359 PMID:19450252 PMID:20869594 RGD:8553605 RGD:8554754 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304
JBrowse link
G Reln reelin involved_in ISO (PMID:21664258) CACAO PMID:21664258 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
postsynaptic intermediate filament cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ina internexin neuronal intermediate filament protein alpha involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624831:2,529,710...2,541,630
Ensembl chrNW_004624831:2,529,725...2,540,759
JBrowse link
G Nefh neurofilament heavy chain involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624747:5,806,576...5,816,158
Ensembl chrNW_004624747:5,806,645...5,815,554
JBrowse link
G Nefl neurofilament light chain involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624758:20,063,109...20,068,459
Ensembl chrNW_004624758:20,062,685...20,068,609
JBrowse link
G Nefm neurofilament medium chain involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624758:20,030,450...20,036,105 JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb2 EPH receptor B2 involved_in ISO PMID:11136979 SynGO PMID:11136979 RGD:13702452 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:22038977) UniProt PMID:22038977 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:12796785), (PMID:15620359) BHF-UCL PMID:12796785 PMID:15620359 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (PMID:21642956) BHF-UCL PMID:21642956 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304
JBrowse link
postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb1 cholinergic receptor nicotinic beta 1 subunit involved_in ISO (PMID:8651643) UniProt PMID:8651643 NCBI chrNW_004624786:10,056,458...10,065,768
Ensembl chrNW_004624786:10,056,478...10,065,735
JBrowse link
G Gdnf glial cell derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:15381279) MGI PMID:15381279 NCBI chrNW_004624759:17,263,570...17,290,046
Ensembl chrNW_004624759:17,263,969...17,287,723
JBrowse link
postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein involved_in ISO (PMID:21041412) SynGO PMID:21041412 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:21041412) SynGO PMID:21041412 NCBI chrNW_004624945:734,532...767,184
Ensembl chrNW_004624945:734,532...767,168
JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (PMID:21041412) SynGO PMID:21041412 NCBI chrNW_004624742:31,189,890...31,390,284
Ensembl chrNW_004624742:31,189,852...31,390,478
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:15620359) SynGO PMID:15620359 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (PMID:15620359), (PMID:19755106) SynGO PMID:15620359 PMID:19755106 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:17897391 SynGO PMID:17897391 RGD:9831151 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Ntng2 netrin G2 involved_in ISO (PMID:16980967) SynGO PMID:16980967 NCBI chrNW_004624760:4,016,441...4,067,325
Ensembl chrNW_004624760:4,016,441...4,067,126
JBrowse link
postsynaptic specialization organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor involved_in ISO PMID:36803960 SynGO PMID:36803960 RGD:405650205 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Cnksr2 connector enhancer of kinase suppressor of Ras 2 involved_in ISO PMID:32235845
(PMID:36803960)
SynGO PMID:32235845 PMID:36803960 RGD:405650233 NCBI chrNW_004624829:6,286,716...6,556,757
Ensembl chrNW_004624829:6,286,259...6,556,757
JBrowse link
G Insyn1 inhibitory synaptic factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:662,222...672,242
Ensembl chrNW_004624781:662,439...672,377
JBrowse link
G Myo9a myosin IXA involved_in ISO (PMID:26834556) SynGO PMID:26834556 NCBI chrNW_004624781:1,900,669...2,179,269
Ensembl chrNW_004624781:1,967,671...2,175,150
JBrowse link
presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (PMID:12202822) SynGO PMID:12202822 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981
JBrowse link
G Cntn5 contactin 5 involved_in ISO (PMID:24411736) SynGO PMID:24411736 NCBI chrNW_004624878:2,369,865...3,348,339
Ensembl chrNW_004624878:2,372,472...3,092,507
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:16818724) SynGO PMID:16818724 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Efnb1 ephrin B1 involved_in ISO PMID:19915143 SynGO PMID:19915143 RGD:13702172 NCBI chrNW_004624891:1,394,948...1,407,898
Ensembl chrNW_004624891:1,394,852...1,407,959
JBrowse link
G Efnb2 ephrin B2 involved_in ISO PMID:19915143 SynGO PMID:19915143 RGD:13702172 NCBI chrNW_004624793:5,089,675...5,130,022
Ensembl chrNW_004624793:5,089,639...5,130,503
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO PMID:20530549 SynGO PMID:20530549 RGD:13702329 NCBI chrNW_004624765:8,222,193...8,228,530
Ensembl chrNW_004624765:8,222,237...8,228,050
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) MGI PMID:23358245 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO (PMID:23358245) MGI PMID:23358245 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO PMID:12796785
(PMID:21410790)
SynGO PMID:12796785 PMID:21410790 RGD:13702298 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (PMID:21926414) SynGO PMID:21926414 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956
JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO PMID:21262467 SynGO PMID:21262467 RGD:13702219 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614
JBrowse link
G Sdcbp syndecan binding protein involved_in ISO PMID:19915143 SynGO PMID:19915143 RGD:13702172 NCBI chrNW_004624744:33,524,045...33,558,963
Ensembl chrNW_004624744:33,524,416...33,557,025
JBrowse link
presynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 involved_in ISO (PMID:19561098) ARUK-UCL PMID:19561098 NCBI chrNW_004624832:6,413,169...6,423,394
Ensembl chrNW_004624832:6,414,587...6,423,394
JBrowse link
presynaptic actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef7 Rho guanine nucleotide exchange factor 7 involved_in ISO PMID:22114281 SynGO PMID:22114281 RGD:13702413 NCBI chrNW_004624793:1,880,681...1,995,604
Ensembl chrNW_004624793:1,880,382...1,995,610
JBrowse link
G Cap2 cyclase associated actin cytoskeleton regulatory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624756:8,990,151...9,174,208
Ensembl chrNW_004624756:8,989,203...9,174,283
JBrowse link
G Daam1 dishevelled associated activator of morphogenesis 1 involved_in ISO PMID:25897839 SynGO PMID:25897839 RGD:11054412 NCBI chrNW_004624734:41,709,226...41,880,149
Ensembl chrNW_004624734:41,708,570...41,866,887
JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in ISO (PMID:21976510) SynGO PMID:21976510 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Pfn2 profilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:27,306,452...27,312,493
Ensembl chrNW_004624730:27,307,030...27,312,501
JBrowse link
G Tln2 talin 2 involved_in ISO (PMID:15479735) SynGO PMID:15479735 NCBI chrNW_004624781:9,626,031...10,030,427
Ensembl chrNW_004624781:9,623,413...9,965,960
JBrowse link
presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon presynaptic cytomatrix protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450
JBrowse link
G LOC106008950 protein piccolo-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:31,086,290...31,142,979 JBrowse link
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (PMID:23684785) MGI PMID:23684785 NCBI chrNW_004624748:18,958,250...19,056,278
Ensembl chrNW_004624748:18,958,276...19,054,381
JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
presynaptic cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23035100) SynGO PMID:23035100 NCBI chrNW_004624788:11,441,840...11,657,515
Ensembl chrNW_004624788:11,441,747...11,573,029
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1rapl1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) CACAO PMID:21940441 NCBI chrNW_004624787:266,027...1,489,032
Ensembl chrNW_004624787:268,829...1,291,144
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:22038977) UniProt PMID:22038977 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:15797875
(PMID:10892652), (PMID:12796785), (PMID:15620359)
PMID:19730411
BHF-UCL PMID:10892652 PMID:12796785 PMID:15620359 PMID:15797875 PMID:19730411 RGD:8554205 RGD:8554379 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO PMID:15797875
(PMID:19016888)
(PMID:15620359)
BHF-UCL PMID:15620359 PMID:15797875 PMID:19016888 RGD:8554205 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Nlgn4x neuroligin 4 X-linked involved_in ISO (PMID:19726642) BHF-UCL PMID:19726642 NCBI chrNW_004624834:3,646,449...4,000,328 JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:12796785) BHF-UCL PMID:12796785 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964) BHF-UCL PMID:18082964 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956
JBrowse link
presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntn2 contactin 2 involved_in ISO (PMID:23518707) UniProt PMID:23518707 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
protein-containing complex assembly involved in synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrxn1 neurexin 1 involved_in ISO (PMID:12796785) BHF-UCL PMID:12796785 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frrs1l ferric chelate reductase 1 like acts_upstream_of_or_within ISO (PMID:29276473) MGI PMID:29276473 NCBI chrNW_004624758:2,365,246...2,392,699
Ensembl chrNW_004624758:2,365,096...2,387,735
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within ISO (PMID:21558424) MGI PMID:21558424 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
G Shisa6 shisa family member 6 involved_in ISO (PMID:26931375) UniProt PMID:26931375 NCBI chrNW_004624786:13,697,178...14,007,891
Ensembl chrNW_004624786:13,697,330...14,001,891
JBrowse link
G Shisa7 shisa family member 7 NOT|involved_in ISO (PMID:31601770)
(PMID:29199957)
UniProt PMID:29199957 PMID:31601770 NCBI chrNW_004624832:1,898,049...1,909,155
Ensembl chrNW_004624832:1,900,580...1,909,125
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:25429150) MGI PMID:25429150 NCBI chrNW_004624777:18,540,006...18,619,881
Ensembl chrNW_004624777:18,546,799...18,619,947
JBrowse link
regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (PMID:27307232) UniProt PMID:27307232 NCBI chrNW_004624736:1,175,103...1,218,251
Ensembl chrNW_004624736:1,201,988...1,214,971
JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:23921129) ARUK-UCL PMID:23921129 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (PMID:23921129) ARUK-UCL PMID:23921129 NCBI chrNW_004624826:97,605...112,101 JBrowse link
G Homer1 homer scaffold protein 1 involved_in ISO PMID:19345194 UniProt PMID:19345194 RGD:8553291 NCBI chrNW_004624869:3,878,646...4,012,211
Ensembl chrNW_004624869:3,880,001...4,012,240
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26618722) ParkinsonsUK-UCL PMID:26618722 NCBI chrNW_004624914:160,483...188,534
Ensembl chrNW_004624914:160,483...188,490
JBrowse link
regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 involved_in ISO (PMID:15572692) UniProt PMID:15572692 NCBI chrNW_004624765:12,971,867...13,091,446
Ensembl chrNW_004624765:12,998,315...13,091,370
JBrowse link
G Abi3bp ABI family member 3 binding protein involved_in ISO PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chrNW_004624789:14,382,216...14,687,434
Ensembl chrNW_004624789:14,383,162...14,687,395
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 ISO RGD PMID:22328515 RGD:13703034 NCBI chrNW_004624781:13,195,390...13,321,823
Ensembl chrNW_004624781:13,195,755...13,321,823
JBrowse link
G Arc activity regulated cytoskeleton associated protein involved_in ISO PMID:15537891 ARUK-UCL PMID:15537891 RGD:13210528 NCBI chrNW_004624735:13,968,628...13,972,026
Ensembl chrNW_004624735:13,968,654...13,972,026
JBrowse link
G Arhgap33 Rho GTPase activating protein 33 ISO RGD PMID:24003235 RGD:13508596 NCBI chrNW_004624794:10,075,329...10,089,356
Ensembl chrNW_004624794:10,075,462...10,088,958
JBrowse link
G Arhgap44 Rho GTPase activating protein 44 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624877:662,595...851,762
Ensembl chrNW_004624877:661,998...850,431
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044
JBrowse link
G Cfl1 cofilin 1 involved_in ISO (PMID:24464040) ParkinsonsUK-UCL PMID:24464040 NCBI chrNW_004624767:20,574,884...20,578,413
Ensembl chrNW_004624767:20,574,966...20,579,796
JBrowse link
G Dnm3 dynamin 3 ISO RGD PMID:15741233 RGD:8554738 NCBI chrNW_004624771:9,247,463...9,838,276
Ensembl chrNW_004624771:9,247,218...9,838,254
JBrowse link
G Epha4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:3,555,273...3,697,794
Ensembl chrNW_004624823:3,555,288...3,698,990
JBrowse link
G Kif1a kinesin family member 1A involved_in ISO PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chrNW_004624847:4,961,552...5,035,125
Ensembl chrNW_004624847:4,961,552...5,035,061
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:21168496)
(PMID:24464040)
ParkinsonsUK-UCL PMID:21168496 PMID:24464040 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230
JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:4,271,584...4,282,082
Ensembl chrNW_004624741:4,268,869...4,281,653
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (PMID:21808020) BHF-UCL PMID:21808020 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chrNW_004624757:22,332,479...22,597,312
Ensembl chrNW_004624757:22,332,505...22,597,586
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO (PMID:30021165) UniProt PMID:30021165 NCBI chrNW_004624837:627,484...1,116,597
Ensembl chrNW_004624837:629,302...1,111,081
JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970