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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synapse structure or activity
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Accession:GO:0050803 term browser browse the term
Definition:Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).
Synonyms:only_in_taxon: NCBITaxon:6072 ! Eumetazoa



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regulation of synapse structure or activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10219973) Ensembl
MGI
PMID:10219973 GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:17005180 RGD:1600855 NCBI chr30:16,954,020...17,056,728
Ensembl chr30:16,957,215...16,988,353
JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F ISO RGD PMID:15750591 RGD:1642736 NCBI chr15:16,590,908...16,666,673
Ensembl chr15:16,591,308...16,666,673
JBrowse link
G SLC17A6 solute carrier family 17 member 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:44,015,161...44,056,286
Ensembl chr21:44,016,133...44,054,931
JBrowse link
G SLC17A7 solute carrier family 17 member 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:107,054,242...107,064,444
Ensembl chr 1:107,054,410...107,063,550
JBrowse link
G SLC17A8 solute carrier family 17 member 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:39,443,790...39,489,988
Ensembl chr15:39,443,518...39,486,595
JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15470153) Ensembl
MGI
PMID:15470153 GO_REF:0000107 NCBI chr12:2,829,274...2,862,888
Ensembl chr12:2,829,306...2,851,432
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:23974706 RGD:11570553 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:68,105,060...68,316,630
Ensembl chr12:68,075,184...68,316,541
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO (PMID:22820466) ARUK-UCL PMID:22820466 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680
JBrowse link
G PRNP prion protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:16,845,224...16,862,319
Ensembl chr24:16,846,207...16,859,815
JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM3 dynamin 3 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 7:26,569,708...27,024,939
Ensembl chr 7:26,574,453...27,024,759
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 ISO RGD PMID:20531346 RGD:11251757 NCBI chr35:14,738,025...14,862,609
Ensembl chr35:14,738,029...14,864,169
JBrowse link
G EFNA1 ephrin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,373,197...42,381,161
Ensembl chr 7:42,373,639...42,378,946
JBrowse link
G NGEF neuronal guanine nucleotide exchange factor involved_in ISO (PMID:17143272) UniProt PMID:17143272 NCBI chr25:44,473,422...44,547,838
Ensembl chr25:44,474,174...44,547,872
JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) CACAO PMID:21808020 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G TWF1 twinfilin actin binding protein 1 ISO RGD PMID:33963280 RGD:596938166 NCBI chr27:10,281,249...10,295,550
Ensembl chr27:10,246,746...10,293,543
JBrowse link
G UBE3A ubiquitin protein ligase E3A ISO RGD PMID:25867122 RGD:11079590 NCBI chr 3:35,347,034...35,442,329
Ensembl chr 3:35,347,064...35,440,256
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:35420982) UniProt PMID:35420982 NCBI chr27:37,879,047...37,913,317
Ensembl chr27:37,879,269...37,913,281
JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 involved_in ISO
IBA
RGD
GO_Central
PMID:23769722 GO_REF:0000033 RGD:152975632 NCBI chr32:10,125,447...10,328,764
Ensembl chr32:10,125,441...10,328,757
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179
JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTN pleiotrophin ISO RGD PMID:7722643 RGD:9834945 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814
JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFL1 cofilin 1 ISO RGD PMID:26169356 RGD:11074527 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212
JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO (PMID:24259049) Alzheimers_University_of_Toronto PMID:24259049 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30902970) MGI
Ensembl
PMID:30902970 GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:29643768) ARUK-UCL PMID:29643768 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,134,775...52,305,163
Ensembl chr12:52,137,605...52,305,162
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 ISO RGD PMID:23358245 RGD:9743980 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760
JBrowse link
G NEGR1 neuronal growth regulator 1 ISO RGD PMID:19711485 RGD:596948412 NCBI chr 6:73,823,686...74,637,906
Ensembl chr 6:73,823,826...74,634,764
JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr13:35,302,439...35,541,336
Ensembl chr13:35,303,380...35,541,294
JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:27893610 RGD:243048440 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:27893610 RGD:243048440 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728
JBrowse link
G TLR2 toll like receptor 2 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,096,108...33,110,551
Ensembl chr 5:33,098,159...33,121,083
JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,864,708...22,869,044
Ensembl chr 9:22,866,212...22,867,360
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23407945) Ensembl
MGI
PMID:23407945 GO_REF:0000107 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100
JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGRMC1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:91,329,243...91,337,951
Ensembl chr  X:91,329,243...91,337,951
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24328732) Alzheimers_University_of_Toronto
Ensembl
PMID:24328732 GO_REF:0000107 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:30206770 RGD:405650589 NCBI chr37:19,029,647...20,134,576
Ensembl chr37:19,037,217...20,134,426
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050
JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122
JBrowse link
G NEDD9 neural precursor cell expressed, developmentally down-regulated 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:10,852,334...11,033,656
Ensembl chr35:10,854,295...10,964,650
JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chr24:34,322,364...34,466,044
Ensembl chr24:34,321,570...34,485,544
JBrowse link
G ZNF804A zinc finger protein 804A involved_in ISO PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chr36:27,453,839...27,527,770
Ensembl chr36:27,458,938...27,527,362
JBrowse link
positive regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 ISO RGD PMID:23441206 RGD:11530033 NCBI chr10:64,696,068...64,733,027
Ensembl chr10:64,696,111...64,730,553
JBrowse link
G ACTR3 actin related protein 3 ISO RGD PMID:23441206 RGD:11530033 NCBI chr19:35,097,968...35,133,330
Ensembl chr19:35,098,639...35,169,724
JBrowse link
G AFDN afadin, adherens junction formation factor ISO RGD PMID:22948147 RGD:13838731 NCBI chr 1:55,435,451...55,535,534
Ensembl chr 1:55,435,472...55,535,543
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15673667 RGD:9684988 NCBI chr 9:923,519...992,254
Ensembl chr 9:923,493...981,923
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:12873385 UniProt PMID:12873385 RGD:8553829
G CAPRIN1 cell cycle associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:33,695,371...33,733,688
Ensembl chr18:33,695,371...33,733,688
JBrowse link
G CAPRIN2 caprin family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:17,518,966...17,560,866
Ensembl chr27:17,517,155...17,560,511
JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase ISO RGD PMID:18606847 RGD:11576294 NCBI chr  X:35,939,117...36,296,438
Ensembl chr  X:35,940,647...36,297,014
JBrowse link
G CUX2 cut like homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:8,711,816...8,997,263
Ensembl chr26:8,730,435...8,993,205
JBrowse link
G DBN1 drebrin 1 involved_in ISO (PMID:25865831) RGD
UniProt
PMID:19174472 PMID:25865831 RGD:10398809 NCBI chr 4:35,899,969...35,913,015
Ensembl chr 4:35,889,392...35,912,507
JBrowse link
G DBNL drebrin like involved_in IBA GO_Central GO_REF:0000033
G DHX36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr23:48,404,351...48,456,360
Ensembl chr23:48,407,316...48,456,654
JBrowse link
G DNM1L dynamin 1 like ISO RGD PMID:19605646 RGD:7800727 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G EEF2K eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chr 6:23,368,296...23,433,853
Ensembl chr 6:23,371,546...23,433,929
JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:21364901 RGD:127285794 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786
JBrowse link
G GPRASP3 G protein-coupled receptor associated sorting protein family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:76,635,887...76,651,465
Ensembl chr  X:76,636,667...76,638,319
JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr  X:23,747,689...25,105,606
Ensembl chr  X:23,943,871...25,099,377
JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr30:8,532,191...8,541,273
Ensembl chr30:8,532,284...8,541,285
JBrowse link
G KALRN kalirin RhoGEF kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19625617) Ensembl
MGI
PMID:19625617 GO_REF:0000107 NCBI chr33:27,161,403...27,752,891
Ensembl chr33:27,161,504...27,746,497
JBrowse link
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736
JBrowse link
G MAPRE3 microtubule associated protein RP/EB family member 3 ISO RGD PMID:31092585 RGD:597538596 NCBI chr17:20,971,868...21,027,634
Ensembl chr17:21,015,464...21,026,845
JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate ISO RGD PMID:16202710 RGD:9685333 NCBI chr12:69,980,003...69,987,150
Ensembl chr12:69,980,433...69,984,848
JBrowse link
G MFN1 mitofusin 1 ISO RGD PMID:19605646 RGD:7800727 NCBI chr34:12,785,799...12,816,881
Ensembl chr34:12,785,856...12,815,994
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:19605646 RGD:7800727 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:19605646 RGD:7800727 NCBI chr23:52,068,123...52,154,410
Ensembl chr23:52,068,118...52,151,593
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400
JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 ISO RGD PMID:18481281 RGD:7775053 NCBI chr  X:84,074,146...84,335,699
Ensembl chr  X:84,074,001...84,329,951
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr11:29,100,913...31,278,495
Ensembl chr11:29,104,448...29,501,600
JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875
JBrowse link
G SLC30A1 solute carrier family 30 member 1 ISO RGD PMID:25319628 RGD:11057402 NCBI chr 7:9,952,373...9,959,382
Ensembl chr 7:9,955,877...9,959,388
JBrowse link
G SRCIN1 SRC kinase signaling inhibitor 1 ISO RGD PMID:31092585 RGD:597538596 NCBI chr 9:23,597,561...23,667,846
Ensembl chr 9:23,597,734...23,667,851
JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chr29:21,995,229...22,292,107
Ensembl chr29:21,996,108...22,283,355
JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 ISO RGD PMID:16474385 RGD:10043325 NCBI chr31:26,058,858...26,440,059
Ensembl chr31:25,932,697...26,202,756
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,670,814...41,695,349
Ensembl chr 7:41,672,120...41,692,460
JBrowse link
G VSTM5 V-set and transmembrane domain containing 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:6,928,557...6,960,603
Ensembl chr21:6,928,126...6,960,202
JBrowse link
G WNT7A Wnt family member 7A involved_in ISO (PMID:21670302) ParkinsonsUK-UCL PMID:21670302 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:35420982) UniProt PMID:35420982 NCBI chr27:37,879,047...37,913,317
Ensembl chr27:37,879,269...37,913,281
JBrowse link
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,670,814...41,695,349
Ensembl chr 7:41,672,120...41,692,460
JBrowse link
G SEMA4D semaphorin 4D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:96,825,963...96,878,956
Ensembl chr 1:96,814,674...96,878,968
JBrowse link
positive regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTN1 dynactin subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,728,096...48,759,187
Ensembl chr17:48,728,270...48,759,147
JBrowse link
G SLC18A3 solute carrier family 18 member A3 involved_in ISO (PMID:19635813) UniProt PMID:19635813 NCBI chr28:1,476,873...1,478,538
Ensembl chr28:1,476,774...1,478,505
JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EFNB3 ephrin B3 ISO RGD PMID:17626212 RGD:152995392 NCBI chr 5:32,588,062...32,592,390
Ensembl chr 5:32,574,134...32,594,333
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
positive regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO (PMID:24259049) ARUK-UCL PMID:24259049 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,616,683...42,667,297
Ensembl chr18:42,616,426...42,665,794
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 ISO RGD PMID:18430734 RGD:2306201 NCBI chr19:35,097,968...35,133,330
Ensembl chr19:35,098,639...35,169,724
JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr13:36,627,791...36,649,013
Ensembl chr13:36,614,498...36,690,936
JBrowse link
G ADGRB2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 2:69,353,425...69,389,256
Ensembl chr 2:69,353,413...69,389,225
JBrowse link
G ADGRB3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr12:31,336,791...32,056,238
Ensembl chr12:31,340,176...32,054,228
JBrowse link
G ADGRE5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr20:48,204,738...48,220,249
Ensembl chr20:48,204,617...48,219,910
JBrowse link
G ADGRL1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr20:48,316,909...48,383,783
Ensembl chr20:48,339,945...48,381,667
JBrowse link
G ADGRL2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 6:65,596,814...66,216,074
Ensembl chr 6:65,596,814...65,750,672
JBrowse link
G ADGRL3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr13:52,742,043...53,568,184
Ensembl chr13:52,909,684...53,538,625
JBrowse link
G ADNP activity dependent neuroprotector homeobox ISO RGD PMID:15800376 RGD:2312779 NCBI chr24:37,211,776...37,245,938
Ensembl chr24:37,213,942...37,243,702
JBrowse link
G AMIGO1 adhesion molecule with Ig like domain 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:42,351,373...42,356,948
Ensembl chr 6:42,351,373...42,354,204
JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr27:7,507,426...7,510,015
Ensembl chr27:7,507,489...7,509,054
JBrowse link
G AMIGO3 adhesion molecule with Ig like domain 3 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr20:39,554,028...39,557,129
Ensembl chr20:39,554,629...39,556,155
JBrowse link
G ASIC2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19571134) Ensembl
MGI
PMID:19571134 GO_REF:0000107 NCBI chr 9:39,082,465...40,084,612
Ensembl chr 9:39,082,806...40,083,842
JBrowse link
G BDNF brain derived neurotrophic factor involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480
JBrowse link
G BDNF brain derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107
G CBLN1 cerebellin 1 precursor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21356198) Ensembl
MGI
PMID:21356198 GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179
JBrowse link
G CBLN2 cerebellin 2 precursor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21356198) MGI
Ensembl
PMID:21356198 GO_REF:0000107 NCBI chr 1:6,378,153...6,384,559
Ensembl chr 1:6,376,777...6,382,024
JBrowse link
G CLSTN2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr23:36,029,356...36,645,614
Ensembl chr23:36,029,371...36,635,571
JBrowse link
G CLSTN3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr27:37,879,047...37,913,317
Ensembl chr27:37,879,269...37,913,281
JBrowse link
G CUX2 cut like homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:8,711,816...8,997,263
Ensembl chr26:8,730,435...8,993,205
JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 ISO RGD PMID:26738857 RGD:243048441 NCBI chr 5:32,165,399...32,175,600
Ensembl chr 5:32,163,594...32,188,126
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:27,687,223...27,780,007
Ensembl chr 4:27,687,287...27,806,722
JBrowse link
G EEF2K eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chr 6:23,368,296...23,433,853
Ensembl chr 6:23,371,546...23,433,929
JBrowse link
G EFNA5 ephrin A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,272,138...4,546,527
Ensembl chr 3:4,272,518...4,542,049
JBrowse link
G EPHB1 EPH receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393
JBrowse link
G EPHB2 EPH receptor B2 involved_in ISO
IEA
RGD
Ensembl
PMID:21364901 GO_REF:0000107 RGD:127285794 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786
JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954
JBrowse link
G FLRT1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
Ensembl
PMID:24613359 GO_REF:0000107 NCBI chr18:52,926,735...52,958,089
Ensembl chr18:52,927,572...52,929,659
JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 8:57,234,748...57,334,598
Ensembl chr 8:57,326,238...57,328,220
JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr24:8,354,151...8,367,601
Ensembl chr24:8,364,115...8,366,064
JBrowse link
G GHRL ghrelin and obestatin prepropeptide acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(PMID:16491079) MGI
Ensembl
UniProt
PMID:16491079 GO_REF:0000024 GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G GPRASP3 G protein-coupled receptor associated sorting protein family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:76,635,887...76,651,465
Ensembl chr  X:76,636,667...76,638,319
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:15,322,256...16,787,966
Ensembl chr32:15,322,738...16,753,656
JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:22,547,422...22,628,628
Ensembl chr34:22,546,899...22,623,544
JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:25908590) UniProt PMID:25908590 NCBI chr  X:23,747,689...25,105,606
Ensembl chr  X:23,943,871...25,099,377
JBrowse link
G IQSEC1 IQ motif and Sec7 domain ArfGEF 1 ISO RGD PMID:26884337 RGD:11560558 NCBI chr20:3,241,058...3,403,394
Ensembl chr20:3,241,052...3,522,859
JBrowse link
G IQSEC2 IQ motif and Sec7 domain ArfGEF 2 ISO RGD PMID:26884337 RGD:11560558 NCBI chr  X:44,861,813...44,915,011
Ensembl chr  X:44,872,888...44,913,704
JBrowse link
G LINGO2 leucine rich repeat and Ig domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr11:45,997,900...47,115,857
Ensembl chr11:45,998,249...46,000,069
JBrowse link
G LINGO4 leucine rich repeat and Ig domain containing 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr17:60,814,948...60,820,517
Ensembl chr17:60,815,499...60,817,448
JBrowse link
G LOC479600 beta-catenin-interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:62,937,154...63,093,083
Ensembl chr 5:62,938,511...63,093,275
JBrowse link
G LRRC24 leucine rich repeat containing 24 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr13:37,941,483...37,943,866
Ensembl chr13:37,940,594...37,947,991
JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:106,166,536...106,229,083
Ensembl chr 1:106,190,248...106,229,089
JBrowse link
G LRRN1 leucine rich repeat neuronal 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr20:13,612,829...13,651,983
Ensembl chr20:13,617,196...13,619,346
JBrowse link
G LRRN3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr14:50,893,254...50,928,475
Ensembl chr14:50,925,878...50,928,004
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr17:43,833,906...43,842,911
Ensembl chr17:43,834,562...43,836,130
JBrowse link
G LRRTM2 leucine rich repeat transmembrane neuronal 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr11:26,392,642...26,397,018
Ensembl chr11:26,392,734...26,396,223
JBrowse link
G LRRTM3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
Ensembl
PMID:24613359 GO_REF:0000107 NCBI chr 4:18,320,720...18,485,863
Ensembl chr 4:18,321,084...18,481,131
JBrowse link
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr17:46,091,140...46,797,107
Ensembl chr17:46,090,978...46,796,020
JBrowse link
G LRTM1 leucine rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr20:35,220,954...35,236,425
Ensembl chr20:35,221,951...35,231,943
JBrowse link
G LRTM2 leucine rich repeats and transmembrane domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr27:43,870,799...43,887,584
Ensembl chr27:43,877,684...43,887,595
JBrowse link
G NLGN1 neuroligin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359)
(PMID:21356198)
MGI
Ensembl
PMID:21356198 PMID:24613359 GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 5:32,338,602...32,351,546
Ensembl chr 5:32,340,335...32,352,412
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO PMID:15797875
(PMID:21642956)
BHF-UCL
CACAO
PMID:15797875 PMID:21642956 RGD:8554205 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371
JBrowse link
G NRXN1 neurexin 1 acts_upstream_of_or_within ISO (PMID:21356198) MGI PMID:21356198 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 7:41,140,931...41,159,326
Ensembl chr 7:41,140,879...41,159,288
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 3:51,131,470...51,491,112
Ensembl chr 3:51,138,751...51,513,024
JBrowse link
G OPCML opioid binding protein/cell adhesion molecule like ISO RGD PMID:19711485 RGD:596948412 NCBI chr 5:2,175,002...2,725,878
Ensembl chr 5:2,175,075...2,655,602
JBrowse link
G OXT oxytocin/neurophysin I prepropeptide ISO RGD PMID:16488155 RGD:2304173 NCBI chr24:18,193,381...18,194,232
Ensembl chr24:18,193,339...18,194,170
JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:16488155 RGD:2304173 NCBI chr20:9,358,797...9,382,308
Ensembl chr20:9,358,916...9,378,343
JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:53,447,802...53,527,563
Ensembl chr 2:53,448,286...53,524,970
JBrowse link
G PRKCA protein kinase C alpha ISO RGD PMID:18073185 RGD:2293299 NCBI chr 9:13,638,106...13,879,571
Ensembl chr 9:13,644,010...13,967,630
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in ISO (PMID:25908590), (PMID:25989451) UniProt PMID:25908590 PMID:25989451 NCBI chr11:29,100,913...31,278,495
Ensembl chr11:29,104,448...29,501,600
JBrowse link
G SLIT2 slit guidance ligand 2 ISO RGD PMID:26738857 RGD:243048441 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:24613359) MGI
GO_Central
PMID:24613359 GO_REF:0000033 NCBI chr22:36,325,548...36,329,784
Ensembl chr22:36,326,751...36,328,841
JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:24613359) MGI
GO_Central
PMID:24613359 GO_REF:0000033 NCBI chr  X:114,576,526...114,584,471
Ensembl chr  X:114,581,070...114,583,607
JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr34:30,447,606...30,456,444
Ensembl chr34:30,447,659...30,450,598
JBrowse link
G SLITRK4 SLIT and NTRK like family member 4 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:24613359) Ensembl
GO_Central
MGI
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:112,794,049...112,806,710
Ensembl chr  X:112,799,447...112,801,963
JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:24613359) MGI
GO_Central
PMID:24613359 GO_REF:0000033 NCBI chr22:39,381,201...39,390,728
Ensembl chr22:39,384,666...39,387,542
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:24613359) MGI
GO_Central
PMID:24613359 GO_REF:0000033 NCBI chr22:37,911,533...37,918,273
Ensembl chr22:37,912,612...37,925,177
JBrowse link
G SRPX2 sushi repeat containing protein X-linked 2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr  X:74,513,473...74,536,446
Ensembl chr  X:74,513,774...74,534,910
JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO RGD PMID:16887122 RGD:27372880 NCBI chr 3:47,588,804...47,654,853
Ensembl chr 3:47,588,797...47,655,593
JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chr29:21,995,229...22,292,107
Ensembl chr29:21,996,108...22,283,355
JBrowse link
G SYNDIG1 synapse differentiation inducing 1 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr23:759,787...865,659
Ensembl chr23:685,782...865,359
JBrowse link
G THBS2 thrombospondin 2 ISO RGD PMID:15707899 RGD:1580068 NCBI chr 1:56,402,519...56,429,975
Ensembl chr 1:56,402,524...56,451,892
JBrowse link
G TPBG trophoblast glycoprotein acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr12:42,872,289...42,878,071
Ensembl chr12:42,871,239...42,875,151
JBrowse link
G TPBG trophoblast glycoprotein involved_in IEA Ensembl GO_REF:0000107
G UBE2V2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962
JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:18986540)
(PMID:9405095)
BHF-UCL
MGI
PMID:9405095 PMID:18986540 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
positive regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANAPC2 anaphase promoting complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,475,777...48,486,715
Ensembl chr 9:48,471,584...48,609,303
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:12873385 UniProt PMID:12873385 RGD:8553829
G CDC20 cell division cycle 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,803,204...16,806,935
Ensembl chr15:16,803,204...16,806,919
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,725,887...60,918,242
Ensembl chr 9:60,726,809...60,918,139
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425
JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,856,494...15,935,897
Ensembl chr28:15,856,616...15,933,763
JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,864,708...22,869,044
Ensembl chr 9:22,866,212...22,867,360
JBrowse link
G NRXN1 neurexin 1 acts_upstream_of_or_within ISO (PMID:19567877) MGI PMID:19567877 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875
JBrowse link
G TMEM210 transmembrane protein 210 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,488,897...48,490,044
Ensembl chr 9:48,471,584...48,609,303
JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREML1 triggering receptor expressed on myeloid cells like 1 involved_in ISO (PMID:33097708) ARUK-UCL PMID:33097708 NCBI chr12:9,915,692...9,928,322
Ensembl chr12:9,915,677...9,928,174
JBrowse link
positive regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMK1 calcium/calmodulin dependent protein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,475,902...8,486,214
Ensembl chr20:8,475,716...8,486,214
JBrowse link
G FRMPD4 FERM and PDZ domain containing 4 involved_in ISO (PMID:19118189) UniProt PMID:19118189 NCBI chr  X:8,663,015...9,229,269
Ensembl chr  X:8,664,739...9,226,025
JBrowse link
G LOC403934 cell division cycle 42 ISO RGD PMID:21423166 RGD:5688281 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin involved_in ISO (PMID:10402191) UniProt PMID:10402191 NCBI chr 5:56,239,621...56,273,679
Ensembl chr 5:56,239,701...56,272,745
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO RGD PMID:14749715 RGD:2317108 NCBI chr11:65,552,320...65,642,165
Ensembl chr11:65,551,889...65,642,349
JBrowse link
regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD17B abhydrolase domain containing 17B, depalmitoylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,806,873...85,861,051
Ensembl chr 1:85,807,511...85,863,551
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:23921129) ARUK-UCL PMID:23921129 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb involved_in ISO (PMID:23921129) ARUK-UCL PMID:23921129 NCBI chr38:20,980,777...20,994,403 JBrowse link
G HOMER1 homer scaffold protein 1 involved_in ISO PMID:19345194 UniProt PMID:19345194 RGD:8553291 NCBI chr 3:27,395,337...27,525,822
Ensembl chr 3:27,400,839...27,523,320
JBrowse link
G VPS35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,428,073...8,454,601
Ensembl chr15:8,428,172...8,454,049
JBrowse link
regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISO (PMID:15572692) UniProt PMID:15572692 NCBI chr37:12,162,815...12,278,505
Ensembl chr37:12,162,392...12,282,395
JBrowse link
G ABI3BP ABI family member 3 binding protein involved_in ISO PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr33:7,265,804...7,498,973
Ensembl chr33:7,266,685...7,418,106
JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 ISO RGD PMID:22328515 RGD:13703034 NCBI chr30:23,605,724...23,732,038
Ensembl chr30:23,606,517...23,731,823
JBrowse link
G ARC activity regulated cytoskeleton associated protein involved_in ISO PMID:15537891 ARUK-UCL PMID:15537891 RGD:13210528 NCBI chr13:36,743,027...36,744,266 JBrowse link
G ARHGAP33 Rho GTPase activating protein 33 ISO RGD PMID:24003235 RGD:13508596 NCBI chr 1:116,851,341...116,864,696
Ensembl chr 1:116,851,328...116,864,561
JBrowse link
G ARHGAP44 Rho GTPase activating protein 44 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:36,790,059...36,957,932
Ensembl chr 5:36,789,814...36,957,411
JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569
JBrowse link
G CFL1 cofilin 1 involved_in ISO (PMID:24464040) ParkinsonsUK-UCL PMID:24464040 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212
JBrowse link
G DNM3 dynamin 3 ISO RGD PMID:15741233 RGD:8554738 NCBI chr 7:26,569,708...27,024,939
Ensembl chr 7:26,574,453...27,024,759
JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646
JBrowse link
G KIF1A kinesin family member 1A involved_in ISO PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr25:50,855,703...50,945,014
Ensembl chr25:50,858,698...50,944,964
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G LZTS3 leucine zipper tumor suppressor family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr24:18,111,188...18,122,246
Ensembl chr24:18,117,723...18,120,428
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) BHF-UCL PMID:21808020 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371
JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr32:17,294,023...17,505,212
Ensembl chr32:17,294,073...17,502,409
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:23,481,370...23,950,412
Ensembl chr15:23,482,549...23,951,141
JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chr14:20,251,791...20,563,315
Ensembl chr14:20,251,738...20,557,208
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SIPA1L1 signal induced proliferation associated 1 like 1 involved_in ISO PMID:11502259 UniProt PMID:11502259 RGD:8554032 NCBI chr 8:44,916,309...45,260,197
Ensembl chr 8:44,990,495...45,258,614
JBrowse link
G SRCIN1 SRC kinase signaling inhibitor 1 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:23,597,561...23,667,846
Ensembl chr 9:23,597,734...23,667,851
JBrowse link
G TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:11,133,634...11,459,738
Ensembl chr 9:11,151,475...11,454,022
JBrowse link
G ZDHHC15 zinc finger DHHC-type palmitoyltransferase 15 involved_in ISO PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chr  X:58,641,182...58,812,671
Ensembl chr  X:58,645,650...58,812,671
JBrowse link
regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:32434929) UniProt PMID:32434929 NCBI chr27:37,879,047...37,913,317
Ensembl chr27:37,879,269...37,913,281
JBrowse link
regulation of excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNK13 potassium two pore domain channel subfamily K member 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:61,127,385...61,223,113
Ensembl chr 8:61,126,883...61,222,650
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHFPL4 LHFPL tetraspan subfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,630,981...8,663,918
Ensembl chr20:8,630,747...8,660,389
JBrowse link
regulation of modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin involved_in ISO PMID:29317530 SynGO PMID:29317530 RGD:405650325 NCBI chr  X:85,742,610...85,807,557
Ensembl chr  X:85,745,207...85,807,353
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 involved_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr 9:923,519...992,254
Ensembl chr 9:923,493...981,923
JBrowse link
G CAP2 cyclase associated actin cytoskeleton regulatory protein 2 involved_in ISO PMID:33094279 SynGO PMID:33094279 RGD:405650308 NCBI chr35:16,336,716...16,476,166
Ensembl chr35:16,336,753...16,474,913
JBrowse link
G CTTNBP2 cortactin binding protein 2 involved_in ISO PMID:22262902 SynGO PMID:22262902 RGD:13702362 NCBI chr14:56,514,114...56,665,437
Ensembl chr14:56,514,381...56,657,958
JBrowse link
G CYFIP1 cytoplasmic FMR1 interacting protein 1 involved_in ISO (PMID:24050404) SynGO PMID:24050404 NCBI chr 3:32,096,471...32,170,107
Ensembl chr 3:32,097,037...32,187,781
JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in ISO (PMID:31600191) SynGO PMID:31600191 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484
JBrowse link
G ITSN1 intersectin 1 involved_in ISO PMID:19258322 SynGO PMID:19258322 RGD:13461864 NCBI chr31:29,144,754...29,360,134 JBrowse link
G KALRN kalirin RhoGEF kinase involved_in ISO PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chr33:27,161,403...27,752,891
Ensembl chr33:27,161,504...27,746,497
JBrowse link
G LIMK1 LIM domain kinase 1 involved_in ISO PMID:25884247 SynGO PMID:25884247 RGD:405650283 NCBI chr 6:6,263,374...6,285,734
Ensembl chr 6:6,264,548...6,286,026
JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate involved_in ISO PMID:16202710 SynGO PMID:16202710 RGD:9685333 NCBI chr12:69,980,003...69,987,150
Ensembl chr12:69,980,433...69,984,848
JBrowse link
G MYH10 myosin heavy chain 10 involved_in ISO PMID:20797537 SynGO PMID:20797537 RGD:12050124 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G PRMT8 protein arginine methyltransferase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:41,245,480...41,338,437
Ensembl chr27:41,246,287...41,430,680
JBrowse link
G PTK2 protein tyrosine kinase 2 involved_in ISO (PMID:19553453) SynGO PMID:19553453 NCBI chr13:35,302,439...35,541,336
Ensembl chr13:35,303,380...35,541,294
JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 involved_in ISO PMID:15721239 SynGO PMID:15721239 RGD:12050147 NCBI chr31:26,058,858...26,440,059
Ensembl chr31:25,932,697...26,202,756
JBrowse link
regulation of modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 involved_in ISO PMID:27713690 SynGO PMID:27713690 RGD:405650302 NCBI chr25:46,449,668...46,980,358
Ensembl chr25:46,449,705...46,973,719
JBrowse link
G ANK3 ankyrin 3 involved_in ISO PMID:25374361 SynGO PMID:25374361 RGD:405650220 NCBI chr 4:12,166,275...12,827,175
Ensembl chr 4:12,167,550...12,827,037
JBrowse link
G CAMKV CaM kinase like vesicle associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,413,050...39,428,973
Ensembl chr20:39,424,519...39,427,612
JBrowse link
G CD44 CD44 molecule involved_in ISO PMID:27798233 SynGO PMID:27798233 RGD:405650378 NCBI chr18:32,735,493...32,826,483
Ensembl chr18:32,737,907...32,827,107
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in ISO PMID:25698751 SynGO PMID:25698751 RGD:13702150 NCBI chr31:789,586...817,925
Ensembl chr31:791,139...817,895
JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,053,486...8,110,791
Ensembl chr 4:8,053,837...8,109,325
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:23864697 SynGO PMID:23864697 RGD:13702314 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
G LOC403934 cell division cycle 42 involved_in ISO PMID:21423166 SynGO PMID:21423166 RGD:5688281 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
JBrowse link
G MRTFA myocardin related transcription factor A involved_in ISO PMID:29335431 SynGO PMID:29335431 RGD:405650348 NCBI chr10:24,561,161...24,759,586
Ensembl chr10:24,561,161...24,759,081
JBrowse link
G MRTFB myocardin related transcription factor B involved_in ISO PMID:29335431 SynGO PMID:29335431 RGD:405650348 NCBI chr 6:28,902,749...29,113,448
Ensembl chr 6:28,918,350...29,098,220
JBrowse link
G MYO5B myosin VB involved_in ISO PMID:18984164 SynGO PMID:18984164 RGD:11533643 NCBI chr 7:78,671,636...79,006,010
Ensembl chr 7:78,671,616...79,006,006
JBrowse link
G NF1 neurofibromin 1 involved_in ISO PMID:24431436 SynGO PMID:24431436 RGD:155230796 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382
JBrowse link
G PDXP pyridoxal phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,945,751...26,952,234
Ensembl chr10:26,946,838...26,952,217
JBrowse link
G PHACTR1 phosphatase and actin regulator 1 involved_in ISO PMID:32975518 SynGO PMID:32975518 RGD:405650326 NCBI chr35:12,233,152...12,745,031
Ensembl chr35:12,491,067...12,741,754
JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:26490870) SynGO PMID:26490870 NCBI chr15:56,133,094...56,353,609
Ensembl chr15:56,174,578...56,352,569
JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
JBrowse link
G RHOB ras homolog family member B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,438,744...15,439,793
Ensembl chr17:15,439,143...15,441,136
JBrowse link
G STRN striatin involved_in ISO PMID:29802198 SynGO PMID:29802198 RGD:405650211 NCBI chr17:29,264,693...29,364,273
Ensembl chr17:29,272,833...29,332,869
JBrowse link
G STRN4 striatin 4 involved_in ISO PMID:28442576 SynGO PMID:28442576 RGD:405650263 NCBI chr 1:109,176,955...109,203,875
Ensembl chr 1:109,176,983...109,202,591
JBrowse link
regulation of modification of synapse structure, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF5B kinesin family member 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:14,835,906...14,880,896
Ensembl chr 2:14,835,901...14,878,251
JBrowse link
G ZDHHC17 zinc finger DHHC-type palmitoyltransferase 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,631,719...19,727,089
Ensembl chr15:19,499,445...19,724,341
JBrowse link
regulation of modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:18,252,543...18,266,033
Ensembl chr 6:18,254,139...18,266,033
JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646
JBrowse link
regulation of postsynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor involved_in ISO (PMID:29969655) SynGO PMID:29969655 NCBI chr 1:55,435,451...55,535,534
Ensembl chr 1:55,435,472...55,535,543
JBrowse link
G ARHGAP12 Rho GTPase activating protein 12 involved_in ISO PMID:26854232 SynGO PMID:26854232 RGD:11572714 NCBI chr 2:14,959,556...15,114,710
Ensembl chr 2:14,976,416...15,115,194
JBrowse link
G ARHGAP33 Rho GTPase activating protein 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:116,851,341...116,864,696
Ensembl chr 1:116,851,328...116,864,561
JBrowse link
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,096,108...33,110,551
Ensembl chr 5:33,098,159...33,121,083
JBrowse link
G ASIC1 acid sensing ion channel subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,638,826...4,663,352
Ensembl chr27:4,638,812...4,648,038
JBrowse link
G ASIC2 acid sensing ion channel subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,082,465...40,084,612
Ensembl chr 9:39,082,806...40,083,842
JBrowse link
G CARMIL3 capping protein regulator and myosin 1 linker 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,059,154...4,076,385
Ensembl chr 8:4,059,133...4,076,396
JBrowse link
G CC2D1A coiled-coil and C2 domain containing 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:48,549,107...48,566,062
Ensembl chr20:48,549,591...48,565,828
JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:22153079) SynGO PMID:22153079 NCBI chr28:6,523,894...6,724,010
Ensembl chr28:6,529,212...6,723,454
JBrowse link
G CRMP1 collapsin response mediator protein 1 involved_in ISO (PMID:18003833) SynGO PMID:18003833 NCBI chr 3:71,009,382...71,077,814
Ensembl chr 3:71,010,299...71,082,216
JBrowse link
G CYFIP2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:28692454) SynGO PMID:28692454 NCBI chr 4:52,769,638...52,875,080
Ensembl chr 4:52,743,048...52,880,589
JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047
JBrowse link
G DCX doublecortin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827
JBrowse link
G DOCK1 dedicator of cytokinesis 1 involved_in ISO (PMID:21900250) SynGO PMID:21900250 NCBI chr28:35,862,267...36,397,666
Ensembl chr28:35,861,523...36,396,883
JBrowse link
G DOCK10 dedicator of cytokinesis 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:37,962,666...38,161,396
Ensembl chr25:37,963,297...38,161,305
JBrowse link
G DOCK4 dedicator of cytokinesis 4 involved_in ISO PMID:23536706 SynGO PMID:23536706 RGD:405650262 NCBI chr14:51,448,910...51,859,366
Ensembl chr14:51,451,059...51,859,040
JBrowse link
G DPYSL2 dihydropyrimidinase like 2 involved_in ISO PMID:29425794 SynGO PMID:29425794 RGD:405650303 NCBI chr25:30,900,347...31,038,256
Ensembl chr25:30,903,253...31,038,144
JBrowse link
G ELMO1 engulfment and cell motility 1 involved_in ISO PMID:21900250 SynGO PMID:21900250 RGD:405650271 NCBI chr14:48,163,218...48,610,626
Ensembl chr14:48,164,049...48,730,248
JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in ISO (PMID:21969592) SynGO PMID:21969592 NCBI chr20:32,047,132...32,099,815
Ensembl chr20:32,047,625...32,097,585
JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in ISO PMID:29983322 SynGO PMID:29983322 RGD:405650287 NCBI chr 8:57,234,748...57,334,598
Ensembl chr 8:57,326,238...57,328,220
JBrowse link
G GNA13 G protein subunit alpha 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:14,932,341...14,972,857
Ensembl chr 9:14,932,335...14,967,881
JBrowse link
G HTR4 5-hydroxytryptamine receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:60,224,534...60,359,244
Ensembl chr 4:60,185,056...60,353,439
JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in ISO PMID:23441206 SynGO PMID:23441206 RGD:11530033 NCBI chr 3:53,683,869...53,791,136
Ensembl chr 3:53,683,791...53,792,186
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,616,683...42,667,297
Ensembl chr18:42,616,426...42,665,794
JBrowse link
G LZTS1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:26490870) SynGO PMID:26490870 NCBI chr25:36,764,235...36,814,204
Ensembl chr25:36,744,061...36,811,972
JBrowse link
G LZTS3 leucine zipper tumor suppressor family member 3 involved_in ISO PMID:27252646 SynGO PMID:27252646 RGD:13210540 NCBI chr24:18,111,188...18,122,246
Ensembl chr24:18,117,723...18,120,428
JBrowse link
G MAP1B microtubule associated protein 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:55,175,000...55,258,160
Ensembl chr 2:55,174,837...55,253,975
JBrowse link
G MARK1 microtubule affinity regulating kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:15,270,523...15,341,934
Ensembl chr38:15,273,004...15,340,448
JBrowse link
G NAE1 NEDD8 activating enzyme E1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:82,462,690...82,486,097
Ensembl chr 5:82,462,744...82,486,100
JBrowse link
G NCKIPSD NCK interacting protein with SH3 domain involved_in ISO PMID:23342115 SynGO PMID:23342115 RGD:405650384 NCBI chr20:40,443,245...40,449,859
Ensembl chr20:40,442,386...40,449,542
JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:15,868,813...16,173,158
Ensembl chr33:15,911,411...15,933,307
JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107
G NEDD8 NEDD8 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,202,621...4,213,090
Ensembl chr 8:4,202,621...4,213,049
JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,856,494...15,935,897
Ensembl chr28:15,856,616...15,933,763
JBrowse link
G NRXN2 neurexin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,439,836...52,537,577
Ensembl chr18:52,439,230...52,536,401
JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in ISO PMID:16394100 SynGO PMID:16394100 RGD:2302413 NCBI chr 8:46,620,444...46,781,564
Ensembl chr 8:46,607,556...46,782,175
JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in ISO PMID:16394100 SynGO PMID:16394100 RGD:2302413 NCBI chr 1:113,076,678...113,103,114
Ensembl chr 1:113,057,141...113,102,074
JBrowse link
G PALM paralemmin involved_in ISO PMID:18287537 SynGO PMID:18287537 RGD:8553517 NCBI chr20:57,847,631...57,868,790
Ensembl chr20:57,849,081...57,868,975
JBrowse link
G PCDH7 protocadherin 7 involved_in ISO PMID:32616769 SynGO PMID:32616769 RGD:405650241 NCBI chr 3:79,973,680...80,388,896
Ensembl chr 3:79,976,541...80,388,896
JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 SynGO PMID:19900557 RGD:8554803 NCBI chr32:17,294,023...17,505,212
Ensembl chr32:17,294,073...17,502,409
JBrowse link
G PPP1R9B protein phosphatase 1 regulatory subunit 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:26,135,982...26,152,303
Ensembl chr 9:26,137,464...26,151,810
JBrowse link
G PSD pleckstrin and Sec7 domain containing involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr28:14,907,600...14,926,874
Ensembl chr28:14,892,695...14,924,122
JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 involved_in ISO PMID:22844492 SynGO PMID:22844492 RGD:405650356 NCBI chr24:36,936,469...37,010,929
Ensembl chr24:36,936,298...37,003,720
JBrowse link
G PUM2 pumilio RNA binding family member 2 involved_in ISO PMID:20133610 SynGO PMID:20133610 RGD:405650299 NCBI chr17:15,258,264...15,354,001
Ensembl chr17:15,261,389...15,354,586
JBrowse link
G RAC1 Rac family small GTPase 1 involved_in ISO (PMID:31369617) SynGO PMID:31369617 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216
JBrowse link
G RAC3 Rac family small GTPase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:293,260...295,990 JBrowse link
G RHOG ras homolog family member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,371,868...26,373,395
Ensembl chr21:26,372,462...26,373,037
JBrowse link
G RTN4 reticulon 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:55,884,452...55,954,476
Ensembl chr10:55,885,125...55,936,574
JBrowse link
G RTN4R reticulon 4 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:29,109,991...29,117,319
Ensembl chr26:29,113,428...29,115,918
JBrowse link
G S1PR2 sphingosine-1-phosphate receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,855,505...50,862,985
Ensembl chr20:50,860,591...50,861,649
JBrowse link
G SAMD4A sterile alpha motif domain containing 4A involved_in ISO PMID:22201125 SynGO PMID:22201125 RGD:405650281 NCBI chr 8:30,476,425...30,687,240
Ensembl chr 8:30,476,418...30,687,240
JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592
JBrowse link
G SENP1 SUMO specific peptidase 1 involved_in ISO PMID:29425794 SynGO PMID:29425794 RGD:405650303 NCBI chr27:6,664,750...6,719,257
Ensembl chr27:6,664,818...6,714,479
JBrowse link
G SIGMAR1 sigma non-opioid intracellular receptor 1 involved_in ISO PMID:20018732 SynGO PMID:20018732 RGD:405650297 NCBI chr11:51,310,672...51,313,426
Ensembl chr11:51,311,085...51,313,400
JBrowse link
G SLC12A5 solute carrier family 12 member 5 involved_in ISO PMID:18093524 SynGO PMID:18093524 RGD:405650301 NCBI chr24:33,285,773...33,322,885
Ensembl chr24:33,285,852...33,321,567
JBrowse link
G SRGAP3 SLIT-ROBO Rho GTPase activating protein 3 involved_in ISO (PMID:21325512) SynGO PMID:21325512 NCBI chr20:8,894,150...9,147,060
Ensembl chr20:8,894,155...9,142,066
JBrowse link
G SYNDIG1 synapse differentiation inducing 1 involved_in ISO PMID:20152115 SynGO PMID:20152115 RGD:8554654 NCBI chr23:759,787...865,659
Ensembl chr23:685,782...865,359
JBrowse link
G TRIM47 tripartite motif containing 47 involved_in ISO PMID:36211980 SynGO PMID:36211980 RGD:405650257 NCBI chr 9:4,718,806...4,731,121
Ensembl chr 9:4,726,249...4,730,790
JBrowse link
G UBE2M ubiquitin conjugating enzyme E2 M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,401,782...99,404,726
Ensembl chr 1:99,401,985...99,404,504
JBrowse link
G UBE3B ubiquitin protein ligase E3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,544,082...17,597,318
Ensembl chr26:17,540,918...17,597,722
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:31813652) SynGO PMID:31813652 NCBI chr  X:35,522,873...35,676,086 JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (PMID:26521016) SynGO PMID:26521016 NCBI chr15:8,428,073...8,454,601
Ensembl chr15:8,428,172...8,454,049
JBrowse link
G ZDHHC8 zinc finger DHHC-type palmitoyltransferase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:29,192,867...29,208,105
Ensembl chr26:29,193,682...29,208,105
JBrowse link
regulation of postsynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD17A abhydrolase domain containing 17A, depalmitoylase involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:57,083,381...57,092,021
Ensembl chr20:57,086,800...57,092,001
JBrowse link
G ABHD17B abhydrolase domain containing 17B, depalmitoylase involved_in ISO PMID:27307232 SynGO PMID:27307232 RGD:13441201 NCBI chr 1:85,806,873...85,861,051
Ensembl chr 1:85,807,511...85,863,551
JBrowse link
G ABHD17C abhydrolase domain containing 17C, depalmitoylase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:56,881,405...56,928,305 JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:23,605,724...23,732,038
Ensembl chr30:23,606,517...23,731,823
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G ARF4 ADP ribosylation factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,849,725...32,871,127
Ensembl chr20:32,849,757...32,870,721
JBrowse link
G ARHGAP22 Rho GTPase activating protein 22 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr28:419,532...555,511
Ensembl chr28:419,838...582,548
JBrowse link
G ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 involved_in ISO (PMID:23050017) SynGO PMID:23050017 NCBI chr13:27,111,785...27,468,476
Ensembl chr13:27,113,994...27,430,758
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 involved_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr 9:923,519...992,254
Ensembl chr 9:923,493...981,923
JBrowse link
G CDC42 cell division cycle 42 involved_in IEA Ensembl GO_REF:0000107
G CDKL5 cyclin dependent kinase like 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:14,512,226...14,725,348
Ensembl chr  X:14,512,178...14,725,233
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in ISO PMID:25698751 SynGO PMID:25698751 RGD:13702150 NCBI chr31:789,586...817,925
Ensembl chr31:791,139...817,895
JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 involved_in ISO (PMID:20335472), (PMID:23826333) SynGO PMID:20335472 PMID:23826333 NCBI chr 8:33,950,016...33,959,671
Ensembl chr 8:33,949,926...33,958,449
JBrowse link
G DGKB diacylglycerol kinase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:28,916,630...29,609,138
Ensembl chr14:28,918,351...29,537,303
JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491
JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,134,775...52,305,163
Ensembl chr12:52,137,605...52,305,162
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in ISO PMID:22516464 SynGO PMID:22516464 RGD:13702295 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G GHSR growth hormone secretagogue receptor involved_in ISO PMID:22516464 SynGO PMID:22516464 RGD:13702295 NCBI chr34:36,691,132...36,694,304
Ensembl chr34:36,690,224...36,694,312
JBrowse link
G GRID1 glutamate ionotropic receptor delta type subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:33,516,893...34,155,573
Ensembl chr 4:33,516,911...34,156,416
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in ISO PMID:24990929 SynGO PMID:24990929 RGD:10002784 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M involved_in ISO PMID:22238095 SynGO PMID:22238095 RGD:155230714 NCBI chr20:52,993,934...53,034,608
Ensembl chr20:52,993,824...53,034,606
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in ISO (PMID:28234934) SynGO PMID:28234934 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:23,747,689...25,105,606
Ensembl chr  X:23,943,871...25,099,377
JBrowse link
G ITSN1 intersectin 1 involved_in ISO PMID:19258322 SynGO PMID:19258322 RGD:13461864 NCBI chr31:29,144,754...29,360,134 JBrowse link
G LOC403934 cell division cycle 42 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
JBrowse link
G LRFN2 leucine rich repeat and fibronectin type III domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:9,202,552...9,248,682
Ensembl chr12:9,169,667...9,388,109
JBrowse link
G MARK2 microtubule affinity regulating kinase 2 involved_in ISO PMID:22807451 SynGO PMID:22807451 RGD:155230723 NCBI chr18:53,101,635...53,125,636
Ensembl chr18:53,101,624...53,151,561
JBrowse link
G MINK1 misshapen like kinase 1 involved_in ISO PMID:21048137 SynGO PMID:21048137 RGD:8553980 NCBI chr 5:31,707,975...31,718,013
Ensembl chr 5:31,708,553...31,749,842
JBrowse link
G NCAN neurocan involved_in ISO (PMID:30356641) SynGO PMID:30356641 NCBI chr20:43,944,257...43,970,864
Ensembl chr20:43,945,143...43,970,886
JBrowse link
G NF1 neurofibromin 1 involved_in ISO (PMID:22105171) SynGO PMID:22105171 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382
JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in ISO (PMID:25143608) SynGO PMID:25143608 NCBI chr18:12,264,063...12,477,247
Ensembl chr18:12,264,063...12,475,230
JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,293,545...14,408,984
Ensembl chr37:14,293,614...14,406,949
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400
JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 involved_in ISO (PMID:25851601) SynGO PMID:25851601 NCBI chr  X:84,074,146...84,335,699
Ensembl chr  X:84,074,001...84,329,951
JBrowse link
G PLPPR4 phospholipid phosphatase related 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,553,769...50,594,298
Ensembl chr 6:50,554,949...50,594,383
JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G PSEN2 presenilin 2 involved_in ISO (PMID:23083742) SynGO PMID:23083742 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722
JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F involved_in ISO PMID:15750591 SynGO PMID:15750591 RGD:1642736 NCBI chr15:16,590,908...16,666,673
Ensembl chr15:16,591,308...16,666,673
JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 involved_in ISO PMID:19734897 SynGO PMID:19734897 RGD:2314692 NCBI chr36:17,087,488...17,323,504
Ensembl chr36:17,087,488...17,323,220
JBrowse link
G RBMX RNA binding motif protein X-linked involved_in ISO PMID:22238095 SynGO PMID:22238095 RGD:155230714 NCBI chr  X:107,173,599...107,182,404
Ensembl chr  X:107,175,634...107,182,347
JBrowse link
G RHEB Ras homolog, mTORC1 binding involved_in ISO PMID:24889507 SynGO PMID:24889507 RGD:13702223 NCBI chr16:15,439,910...15,483,489
Ensembl chr16:15,434,111...15,483,419
JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 involved_in ISO PMID:26003414 SynGO PMID:26003414 RGD:11344299 NCBI chr 1:95,209,122...95,280,956
Ensembl chr 1:95,088,745...95,280,151
JBrowse link
G RPS6KA5 ribosomal protein S6 kinase A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:61,801,185...61,962,846
Ensembl chr 8:61,802,812...61,973,259
JBrowse link
G SEMA3F semaphorin 3F involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,135,580...39,165,381
Ensembl chr20:39,136,523...39,161,325
JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 involved_in ISO PMID:21217644 SynGO PMID:21217644 RGD:13702145 NCBI chr18:47,477,625...47,915,557
Ensembl chr18:47,635,788...47,912,117
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO PMID:21217644 SynGO PMID:21217644 RGD:13702145 NCBI chr10:16,621,445...16,665,366 JBrowse link
G TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr36:4,850,214...5,019,453
Ensembl chr36:4,899,174...5,021,132
JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:28065648 SynGO PMID:28065648 RGD:155230793 NCBI chr 6:18,014,685...18,029,188
Ensembl chr 6:18,000,138...18,029,185
JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 involved_in ISO PMID:15721239 SynGO PMID:15721239 RGD:12050147 NCBI chr31:26,058,858...26,440,059
Ensembl chr31:25,932,697...26,202,756
JBrowse link
G TSC2 TSC complex subunit 2 involved_in ISO PMID:24889507 SynGO PMID:24889507 RGD:13702223 NCBI chr 6:38,865,509...38,898,977
Ensembl chr 6:38,865,507...38,898,960
JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in ISO (PMID:26972007) SynGO PMID:26972007 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323
JBrowse link
G WASL WASP like actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,828,298...11,901,190
Ensembl chr14:11,828,687...11,899,788
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G WNT7A Wnt family member 7A involved_in ISO (PMID:21670302) SynGO PMID:21670302 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein involved_in ISO PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr33:7,265,804...7,498,973
Ensembl chr33:7,266,685...7,418,106
JBrowse link
G CASKIN1 CASK interacting protein 1 involved_in ISO (PMID:31727973) SynGO PMID:31727973 NCBI chr 6:38,776,710...38,788,253
Ensembl chr 6:38,776,710...38,786,727
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179
JBrowse link
G CRIPT CXXC repeat containing interactor of PDZ3 domain involved_in ISO PMID:10570482 SynGO PMID:10570482 RGD:8554363 NCBI chr10:48,840,243...48,851,461
Ensembl chr10:48,839,509...48,851,258
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:15,322,256...16,787,966
Ensembl chr32:15,322,738...16,753,656
JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:22,547,422...22,628,628
Ensembl chr34:22,546,899...22,623,544
JBrowse link
G LATS1 large tumor suppressor kinase 1 involved_in ISO PMID:29317530 SynGO PMID:29317530 RGD:405650325 NCBI chr 1:40,430,096...40,475,193
Ensembl chr 1:40,260,064...40,457,609
JBrowse link
G LRFN1 leucine rich repeat and fibronectin type III domain containing 1 involved_in ISO PMID:16630835 SynGO PMID:16630835 RGD:13702351 NCBI chr 1:113,888,736...113,898,240
Ensembl chr 1:113,891,484...113,898,140
JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr18:50,495,971...50,499,062
Ensembl chr18:50,495,971...50,499,068
JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:106,166,536...106,229,083
Ensembl chr 1:106,190,248...106,229,089
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chr17:43,833,906...43,842,911
Ensembl chr17:43,834,562...43,836,130
JBrowse link
G LRRTM2 leucine rich repeat transmembrane neuronal 2 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chr11:26,392,642...26,397,018
Ensembl chr11:26,392,734...26,396,223
JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:21410790) SynGO PMID:21410790 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303
JBrowse link
G PRICKLE2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) SynGO PMID:23711981 PMID:34613779 NCBI chr20:26,810,167...27,131,864
Ensembl chr20:26,809,958...27,220,057
JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:30,137,546...30,264,221
Ensembl chr25:30,138,209...30,264,133
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in ISO PMID:29024665
(PMID:22357843)
SynGO PMID:22357843 PMID:29024665 RGD:13702141 NCBI chr11:29,100,913...31,278,495
Ensembl chr11:29,104,448...29,501,600
JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068
JBrowse link
G SIPA1L1 signal induced proliferation associated 1 like 1 involved_in ISO PMID:11502259 SynGO PMID:11502259 RGD:8554032 NCBI chr 8:44,916,309...45,260,197
Ensembl chr 8:44,990,495...45,258,614
JBrowse link
regulation of postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034
JBrowse link
G CRIPT CXXC repeat containing interactor of PDZ3 domain involved_in ISO PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr10:48,840,243...48,851,461
Ensembl chr10:48,839,509...48,851,258
JBrowse link
G DBN1 drebrin 1 ISO RGD PMID:12878700 RGD:10398728 NCBI chr 4:35,899,969...35,913,015
Ensembl chr 4:35,889,392...35,912,507
JBrowse link
G SLC30A1 solute carrier family 30 member 1 ISO RGD PMID:25319628 RGD:11057402 NCBI chr 7:9,952,373...9,959,382
Ensembl chr 7:9,955,877...9,959,388
JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chr24:34,322,364...34,466,044
Ensembl chr24:34,321,570...34,485,544
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr 8:26,445,407...26,449,430
Ensembl chr 8:26,445,647...26,525,530
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179
JBrowse link
G CLSTN3 calsyntenin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:37,879,047...37,913,317
Ensembl chr27:37,879,269...37,913,281
JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,194,588...17,214,498
Ensembl chr34:17,195,562...17,214,052
JBrowse link
G FARP1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in ISO PMID:23209303 SynGO PMID:23209303 RGD:8554251 NCBI chr22:48,284,961...48,575,007
Ensembl chr22:48,342,521...48,573,836
JBrowse link
G FZD1 frizzled class receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:17,046,911...17,050,515
Ensembl chr14:17,047,382...17,049,337
JBrowse link
G GPC4 glypican 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:104,098,316...104,215,883
Ensembl chr  X:104,100,571...104,216,103
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO PMID:21410790
PMID:20395510
SynGO PMID:20395510 PMID:21410790 RGD:13702257 RGD:13702347 NCBI chr32:15,322,256...16,787,966
Ensembl chr32:15,322,738...16,753,656
JBrowse link
G IGSF11 immunoglobulin superfamily member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:22,641,370...22,825,973
Ensembl chr33:22,641,648...22,840,745
JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:22,547,422...22,628,628
Ensembl chr34:22,546,899...22,623,544
JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:23,747,689...25,105,606
Ensembl chr  X:23,943,871...25,099,377
JBrowse link
G IL1RAPL2 interleukin 1 receptor accessory protein like 2 involved_in ISO (PMID:21926414) SynGO PMID:21926414 NCBI chr  X:77,918,264...78,959,932 JBrowse link
G IL1RAPL2 interleukin 1 receptor accessory protein like 2 involved_in IEA Ensembl GO_REF:0000107
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chr 1:116,727,092...116,734,844 JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr18:50,495,971...50,499,062
Ensembl chr18:50,495,971...50,499,068
JBrowse link
G LRFN5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:19,365,786...19,602,551
Ensembl chr 8:19,367,570...19,602,185
JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:106,166,536...106,229,083
Ensembl chr 1:106,190,248...106,229,089
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chr17:43,833,906...43,842,911
Ensembl chr17:43,834,562...43,836,130
JBrowse link
G LRRTM3 leucine rich repeat transmembrane neuronal 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:18,320,720...18,485,863
Ensembl chr 4:18,321,084...18,481,131
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760
JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr 8:23,827,284...24,608,003
Ensembl chr 8:23,832,475...24,607,866
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO PMID:10892652 SynGO PMID:10892652 RGD:13702379 NCBI chr 5:32,338,602...32,351,546
Ensembl chr 5:32,340,335...32,352,412
JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:20393464) SynGO PMID:20393464 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:17360903) SynGO PMID:17360903 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G NTNG2 netrin G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,994,593...52,004,620 JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in ISO PMID:21262467 SynGO PMID:21262467 RGD:13702219 NCBI chr 3:51,131,470...51,491,112
Ensembl chr 3:51,138,751...51,513,024
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:36,325,548...36,329,784
Ensembl chr22:36,326,751...36,328,841
JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in ISO (PMID:23345436) SynGO PMID:23345436 NCBI chr  X:114,576,526...114,584,471
Ensembl chr  X:114,581,070...114,583,607
JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:30,447,606...30,456,444
Ensembl chr34:30,447,659...30,450,598
JBrowse link
G SNCA synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT7A Wnt family member 7A involved_in ISO (PMID:20530549) SynGO PMID:20530549 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
regulation of presynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA2D3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:35,097,185...36,043,562
Ensembl chr20:35,097,182...35,956,774
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO PMID:10892652 SynGO PMID:10892652 RGD:13702379 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chr17:46,091,140...46,797,107
Ensembl chr17:46,090,978...46,796,020
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD4 chromodomain helicase DNA binding protein 4 involved_in ISO PMID:24991957 SynGO PMID:24991957 RGD:9587770 NCBI chr27:38,411,009...38,440,367
Ensembl chr27:38,411,075...38,439,958
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:17301182) MGI PMID:17301182 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:33101212) UniProt PMID:33101212 NCBI chr27:37,879,047...37,913,317
Ensembl chr27:37,879,269...37,913,281
JBrowse link
G CRTAC1 cartilage acidic protein 1 involved_in ISO (PMID:33658590) SynGO PMID:33658590 NCBI chr28:11,078,085...11,227,026
Ensembl chr28:11,078,173...11,227,014
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G ELAVL2 ELAV like RNA binding protein 2 involved_in ISO PMID:24991957 SynGO PMID:24991957 RGD:9587770 NCBI chr11:42,504,205...42,647,093
Ensembl chr11:42,506,381...42,671,284
JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786
JBrowse link
G EXOC7 exocyst complex component 7 involved_in ISO PMID:30374940 SynGO PMID:30374940 RGD:405650391 NCBI chr 9:4,538,017...4,554,341
Ensembl chr 9:4,537,944...4,554,328
JBrowse link
G GHSR growth hormone secretagogue receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17060947) Ensembl
MGI
PMID:17060947 GO_REF:0000107 NCBI chr34:36,691,132...36,694,304
Ensembl chr34:36,690,224...36,694,312
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:12657691) MGI PMID:12657691 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050
JBrowse link
G ICAM5 intercellular adhesion molecule 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,809,065...50,816,015
Ensembl chr20:50,802,151...50,815,621
JBrowse link
G L1CAM L1 cell adhesion molecule involved_in ISO (PMID:30846310) SynGO PMID:30846310 NCBI chr  X:121,708,695...121,722,819
Ensembl chr  X:121,708,894...121,733,365
JBrowse link
G LRRTM4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (PMID:23911103) SynGO PMID:23911103 NCBI chr17:46,091,140...46,797,107
Ensembl chr17:46,090,978...46,796,020
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:18599438) Alzheimers_University_of_Toronto PMID:18599438 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:11827984 RGD:1599809 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060
JBrowse link
G NEGR1 neuronal growth regulator 1 ISO RGD PMID:18602091 RGD:40886282 NCBI chr 6:73,823,686...74,637,906
Ensembl chr 6:73,823,826...74,634,764
JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in ISO (PMID:31257103) SynGO PMID:31257103 NCBI chr  X:3,409,529...3,708,234 JBrowse link
G NRG2 neuregulin 2 involved_in ISO PMID:26674872 SynGO PMID:26674872 RGD:11070025 NCBI chr 2:35,085,192...35,264,509
Ensembl chr 2:35,085,361...35,264,378
JBrowse link
G NTN1 netrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,654,723...33,825,832
Ensembl chr 5:33,637,142...33,825,899
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:55,821,227...55,857,597
Ensembl chr  X:55,821,234...55,855,502
JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr32:17,294,023...17,505,212
Ensembl chr32:17,294,073...17,502,409
JBrowse link
G PODXL podocalyxin like involved_in ISO (PMID:20706633) SynGO PMID:20706633 NCBI chr14:5,614,006...5,625,360
Ensembl chr14:5,590,478...5,625,360
JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chr14:20,251,791...20,563,315
Ensembl chr14:20,251,738...20,557,208
JBrowse link
G RAB17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:48,181,557...48,220,729
Ensembl chr25:48,188,085...48,203,149
JBrowse link
G RAP2A RAP2A, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:47,777,621...47,814,061
Ensembl chr22:47,778,780...47,810,802
JBrowse link
G RTN4R reticulon 4 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:29,109,991...29,117,319
Ensembl chr26:29,113,428...29,115,918
JBrowse link
G SDC2 syndecan 2 involved_in ISO PMID:17548511 SynGO PMID:17548511 RGD:405650239 NCBI chr29:40,939,498...41,026,694
Ensembl chr29:40,939,257...41,024,357
JBrowse link
G SEMA4D semaphorin 4D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:96,825,963...96,878,956
Ensembl chr 1:96,814,674...96,878,968
JBrowse link
G SETD5 SET domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,681,714...8,766,013
Ensembl chr20:8,683,738...8,732,674
JBrowse link
G SNAP25 synaptosome associated protein 25 ISO RGD PMID:15478103 RGD:1581079 NCBI chr24:12,003,005...12,081,385
Ensembl chr24:12,004,117...12,081,329
JBrowse link
G SRCIN1 SRC kinase signaling inhibitor 1 involved_in ISO (PMID:28641114) SynGO PMID:28641114 NCBI chr 9:23,597,561...23,667,846
Ensembl chr 9:23,597,734...23,667,851
JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,506,617...2,741,866 JBrowse link
G SRPX2 sushi repeat containing protein X-linked 2 involved_in ISO PMID:24179158 SynGO PMID:24179158 RGD:8553698 NCBI chr  X:74,513,473...74,536,446
Ensembl chr  X:74,513,774...74,534,910
JBrowse link
G VLDLR very low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:91,242,010...91,277,030
Ensembl chr 1:91,241,509...91,272,495
JBrowse link
regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRB3 adhesion G protein-coupled receptor B3 involved_in ISO (PMID:25611509) SynGO PMID:25611509 NCBI chr12:31,336,791...32,056,238
Ensembl chr12:31,340,176...32,054,228
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,169,243...35,230,252
Ensembl chr13:35,180,912...35,268,577
JBrowse link
G C1QL2 complement C1q like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:30,863,165...30,865,292
Ensembl chr19:30,863,214...30,865,716
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:17404223 SynGO PMID:17404223 RGD:13432239
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,293,184...20,307,708
Ensembl chr 9:20,293,170...20,307,662
JBrowse link
G DAB1 DAB adaptor protein 1 involved_in ISO (PMID:27624722) SynGO PMID:27624722 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336
JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558
JBrowse link
G DLGAP4 DLG associated protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,171,756...25,311,960
Ensembl chr24:25,205,641...25,310,479
JBrowse link
G FGF22 fibroblast growth factor 22 involved_in ISO (PMID:20505669), (PMID:27627962) SynGO PMID:20505669 PMID:27627962 NCBI chr20:57,899,300...57,903,064
Ensembl chr20:57,900,416...57,903,061
JBrowse link
G FGF7 fibroblast growth factor 7 involved_in ISO (PMID:20505669) SynGO PMID:20505669 NCBI chr30:15,555,016...15,608,230
Ensembl chr30:15,555,266...15,606,521
JBrowse link
G IGSF9 immunoglobulin superfamily member 9 involved_in ISO PMID:15340156 SynGO PMID:15340156 RGD:405650278 NCBI chr38:22,207,323...22,222,832
Ensembl chr38:22,206,660...22,222,823
JBrowse link
G LOC479600 beta-catenin-interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:62,937,154...63,093,083
Ensembl chr 5:62,938,511...63,093,275
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:35532105 SynGO PMID:35532105 RGD:405650385 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760
JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO PMID:35532105 SynGO PMID:35532105 RGD:405650385 NCBI chr 8:23,827,284...24,608,003
Ensembl chr 8:23,832,475...24,607,866
JBrowse link
G NEFL neurofilament light chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:32,463,361...32,468,965
Ensembl chr25:32,463,452...32,467,224
JBrowse link
G NRG2 neuregulin 2 involved_in ISO PMID:26674872 SynGO PMID:26674872 RGD:11070025 NCBI chr 2:35,085,192...35,264,509
Ensembl chr 2:35,085,361...35,264,378
JBrowse link
G NRN1 neuritin 1 involved_in ISO (PMID:22190461) SynGO PMID:22190461 NCBI chr35:6,070,456...6,079,214
Ensembl chr35:6,070,379...6,078,965
JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:30826947) SynGO PMID:30826947 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707
JBrowse link
G SDC2 syndecan 2 involved_in ISO PMID:9971750 SynGO PMID:9971750 RGD:405650346 NCBI chr29:40,939,498...41,026,694
Ensembl chr29:40,939,257...41,024,357
JBrowse link
G SEMA7A semaphorin 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,531,986...37,547,650
Ensembl chr30:37,531,971...37,566,645
JBrowse link
G SNX27 sorting nexin 27 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:60,653,719...60,727,928
Ensembl chr17:60,653,732...60,724,253
JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (PMID:26521016) SynGO PMID:26521016 NCBI chr15:8,428,073...8,454,601
Ensembl chr15:8,428,172...8,454,049
JBrowse link
G YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta involved_in ISO (PMID:16959763) SynGO PMID:16959763 NCBI chr13:2,729,404...2,764,422 JBrowse link
regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin involved_in ISO PMID:19524020 SynGO PMID:19524020 RGD:13702171 NCBI chr 5:56,239,621...56,273,679
Ensembl chr 5:56,239,701...56,272,745
JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
G ARF4 ADP ribosylation factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,849,725...32,871,127
Ensembl chr20:32,849,757...32,870,721
JBrowse link
G C1QL3 complement C1q like 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21262840) Ensembl
MGI
PMID:21262840 GO_REF:0000107 NCBI chr 2:20,300,916...20,308,393
Ensembl chr 2:20,301,008...20,307,603
JBrowse link
G CAMK1 calcium/calmodulin dependent protein kinase I involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:8,475,902...8,486,214
Ensembl chr20:8,475,716...8,486,214
JBrowse link
G CDH8 cadherin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:86,402,078...86,743,563
Ensembl chr 5:86,402,570...86,743,755
JBrowse link
G CNTNAP4 contactin associated protein family member 4 involved_in ISO (PMID:24870235) SynGO PMID:24870235 NCBI chr 5:74,507,728...74,748,798
Ensembl chr 5:74,509,885...74,748,767
JBrowse link
G CTTNBP2 cortactin binding protein 2 involved_in ISO PMID:22262902 SynGO PMID:22262902 RGD:13702362 NCBI chr14:56,514,114...56,665,437
Ensembl chr14:56,514,381...56,657,958
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:25318560) ParkinsonsUK-UCL PMID:25318560 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496
JBrowse link
G ETV5 ETS variant transcription factor 5 acts_upstream_of_or_within ISO (PMID:17785180) MGI PMID:17785180 NCBI chr34:18,729,684...18,791,667
Ensembl chr34:18,731,943...18,789,386
JBrowse link
G GPM6A glycoprotein M6A involved_in ISO PMID:27793698 SynGO PMID:27793698 RGD:13702167 NCBI chr16:53,697,830...53,846,773
Ensembl chr16:53,698,043...53,845,259
JBrowse link
G GPR158 G protein-coupled receptor 158 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,969,781...8,379,657
Ensembl chr 2:7,971,800...8,378,198
JBrowse link
G HSD17B11 hydroxysteroid 17-beta dehydrogenase 11 involved_in ISO PMID:21788491 SynGO PMID:21788491 RGD:13702385 NCBI chr32:10,821,332...10,854,541
Ensembl chr32:10,794,617...10,854,193
JBrowse link
G IGSF9 immunoglobulin superfamily member 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24647940) Ensembl
MGI
PMID:24647940 GO_REF:0000107 NCBI chr38:22,207,323...22,222,832
Ensembl chr38:22,206,660...22,222,823
JBrowse link
G IL10 interleukin 10 ISO RGD PMID:24278397 RGD:11049480 NCBI chr 7:5,933,285...5,937,057
Ensembl chr 7:5,933,285...5,937,057
JBrowse link
G IL10RA interleukin 10 receptor subunit alpha ISO RGD PMID:24278397 RGD:11049480 NCBI chr 5:15,675,775...15,688,935
Ensembl chr 5:15,677,547...15,682,163
JBrowse link
G KLK8 kallikrein related peptidase 8 involved_in ISO (PMID:11273653) UniProt PMID:11273653 NCBI chr 1:105,874,788...105,880,788
Ensembl chr 1:105,874,328...105,894,933
JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:26658218) SynGO PMID:26658218 NCBI chr37:25,811,491...25,818,838 JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in ISO PMID:19442733 SynGO PMID:19442733 RGD:11069248 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO PMID:11827984 SynGO PMID:11827984 RGD:1599809 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:19345204) MGI
GO_Central
PMID:19345204 GO_REF:0000033 NCBI chr30:21,123,333...21,229,907
Ensembl chr30:21,126,043...21,229,870
JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:17,629,163...17,858,471
Ensembl chr 1:17,633,591...17,950,072
JBrowse link
G PTPRO protein tyrosine phosphatase receptor type O involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:31,082,334...31,322,024
Ensembl chr27:31,084,544...31,322,022
JBrowse link
G PTPRT protein tyrosine phosphatase receptor type T involved_in ISO PMID:19816407 SynGO PMID:19816407 RGD:13702429 NCBI chr24:29,992,957...30,764,469
Ensembl chr24:30,000,637...30,820,835
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 involved_in ISO PMID:23303958 SynGO PMID:23303958 RGD:13702404 NCBI chr15:2,353,876...2,391,742
Ensembl chr15:2,353,693...2,404,431
JBrowse link
G RIMS4 regulating synaptic membrane exocytosis 4 involved_in ISO PMID:23303958 SynGO PMID:23303958 RGD:13702404 NCBI chr24:32,199,068...32,256,474
Ensembl chr24:32,203,410...32,256,480
JBrowse link
G SEPTIN11 septin 11 involved_in ISO PMID:19380581 SynGO PMID:19380581 RGD:13702154 NCBI chr32:1,553,208...1,608,132
Ensembl chr32:1,475,748...1,607,107
JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25429150) Ensembl
MGI
PMID:25429150 GO_REF:0000107 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in ISO PMID:27273464 SynGO PMID:27273464 RGD:13702200 NCBI chr22:36,325,548...36,329,784
Ensembl chr22:36,326,751...36,328,841
JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in ISO (PMID:27273464) SynGO PMID:27273464 NCBI chr  X:114,576,526...114,584,471
Ensembl chr  X:114,581,070...114,583,607
JBrowse link
G SLITRK4 SLIT and NTRK like family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,794,049...112,806,710
Ensembl chr  X:112,799,447...112,801,963
JBrowse link
G SPARC secreted protein acidic and cysteine rich involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:57,659,541...57,682,147
Ensembl chr 4:57,659,650...57,681,711
JBrowse link
G SPARCL1 SPARC like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr32:10,900,072...10,944,392
Ensembl chr32:10,900,283...10,944,449
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
G TUBB tubulin beta class I involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:512,738...517,154 JBrowse link
G VCP valosin containing protein involved_in ISO PMID:22105171 SynGO PMID:22105171 RGD:13702359 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRB3 adhesion G protein-coupled receptor B3 involved_in ISO (PMID:25611509) SynGO PMID:25611509 NCBI chr12:31,336,791...32,056,238
Ensembl chr12:31,340,176...32,054,228
JBrowse link
G C1QL1 complement C1q like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,524,510...18,531,277
Ensembl chr 9:18,524,603...18,530,764
JBrowse link
G CD47 CD47 molecule involved_in ISO (PMID:30308165) SynGO PMID:30308165 NCBI chr33:13,315,984...13,362,971
Ensembl chr33:13,319,266...13,363,580
JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in ISO PMID:17143272 SynGO PMID:17143272 RGD:8554385 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269
JBrowse link
G EPHA4 EPH receptor A4 involved_in ISO PMID:17143272 SynGO PMID:17143272 RGD:8554385 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646
JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961
JBrowse link
G NGEF neuronal guanine nucleotide exchange factor involved_in ISO (PMID:17143272) SynGO PMID:17143272 NCBI chr25:44,473,422...44,547,838
Ensembl chr25:44,474,174...44,547,872
JBrowse link
G PLXNC1 plexin C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:34,279,880...34,417,134
Ensembl chr15:34,279,932...34,417,720
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,620,878...42,639,662
Ensembl chr 9:42,622,538...42,639,590
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (PMID:34407949) SynGO PMID:34407949 NCBI chr38:21,822,873...21,824,537 JBrowse link
regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:36,852,082...37,164,930
Ensembl chr 3:36,852,543...36,978,399
JBrowse link
G CTNNA2 catenin alpha 2 involved_in ISO (PMID:15034585) UniProt PMID:15034585 NCBI chr17:43,472,346...44,504,881
Ensembl chr17:43,472,923...44,557,766
JBrowse link
G DMPK DM1 protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,824,103...109,834,986
Ensembl chr 1:109,824,597...109,834,976
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:22216301 RGD:6907446 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241
JBrowse link
G NCAN neurocan acts_upstream_of_or_within ISO (PMID:11486035) MGI PMID:11486035 NCBI chr20:43,944,257...43,970,864
Ensembl chr20:43,945,143...43,970,886
JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chr14:20,251,791...20,563,315
Ensembl chr14:20,251,738...20,557,208
JBrowse link
regulation of synaptic activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin acts_upstream_of_or_within ISO (PMID:24753587) MGI PMID:24753587 NCBI chr 5:56,239,621...56,273,679
Ensembl chr 5:56,239,701...56,272,745
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:18599437), (PMID:18599438), (PMID:22496871) UniProt PMID:18599437 PMID:18599438 PMID:22496871 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
G SYBU syntabulin ISO RGD PMID:19828815 RGD:13217418 NCBI chr13:10,110,183...10,179,514
Ensembl chr13:10,111,091...10,180,056
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,239,621...56,273,679
Ensembl chr 5:56,239,701...56,272,745
JBrowse link
G LIN7A lin-7 homolog A, crumbs cell polarity complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:23,101,524...23,186,343
Ensembl chr15:23,111,944...23,187,354
JBrowse link
G LIN7B lin-7 homolog B, crumbs cell polarity complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:107,332,623...107,336,099
Ensembl chr 1:107,332,623...107,336,302
Ensembl chr 1:107,332,623...107,336,302
JBrowse link
G LIN7C lin-7 homolog C, crumbs cell polarity complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:48,061,446...48,071,458
Ensembl chr21:48,064,929...48,071,429
JBrowse link
G LOC119864910 protein lin-7 homolog C involved_in IBA GO_Central GO_REF:0000033
G MUSK muscle associated receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:8653786) MGI PMID:8653786 NCBI chr11:65,552,320...65,642,165
Ensembl chr11:65,551,889...65,642,349
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370
JBrowse link
G PDZD11 PDZ domain containing 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:54,735,579...54,739,084
Ensembl chr  X:54,731,840...54,739,010
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21884692) Ensembl
MGI
PMID:21884692 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21884692) Ensembl
MGI
PMID:21884692 GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chr 1:116,727,092...116,734,844 JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:23751499 SynGO PMID:23751499 RGD:13702234 NCBI chr18:17,973,058...19,098,785
Ensembl chr18:17,918,928...18,930,059
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,145,647...5,221,558
Ensembl chr12:5,146,037...5,220,603
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760
JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr 8:23,827,284...24,608,003
Ensembl chr 8:23,832,475...24,607,866
JBrowse link
G PCDH8 protocadherin 8 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr22:9,860,590...9,865,298
Ensembl chr22:9,860,827...9,865,412
JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr 6:18,014,685...18,029,188
Ensembl chr 6:18,000,138...18,029,185
JBrowse link
regulation of terminal button organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) CACAO PMID:21808020 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:22851330 RGD:13506174 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:22851330 RGD:13506174 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
G VPS35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,428,073...8,454,601
Ensembl chr15:8,428,172...8,454,049
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22098
    biological regulation 12540
      regulation of biological quality 3359
        regulation of synapse structure or activity 421
          regulation of synapse organization + 415
          regulation of synaptic activity 3
paths to the root