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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synapse structure or activity
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Accession:GO:0050803 term browser browse the term
Definition:Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).
Synonyms:only_in_taxon: NCBITaxon:6072 ! Eumetazoa



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regulation of synapse structure or activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10219973) Ensembl
MGI
PMID:10219973 GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:17005180 RGD:1600855 NCBI chr15:30,152,924...30,282,854
Ensembl chr15:48,486,688...48,521,554
JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F ISO RGD PMID:15750591 RGD:1642736 NCBI chr 1:42,878,344...42,923,539
Ensembl chr 1:44,220,991...44,297,647
JBrowse link
G SLC17A6 solute carrier family 17 member 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:22,350,537...22,392,009
Ensembl chr11:22,258,011...22,301,944
JBrowse link
G SLC17A7 solute carrier family 17 member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:46,443,076...46,455,195
Ensembl chr19:55,365,811...55,377,438
JBrowse link
G SLC17A8 solute carrier family 17 member 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:97,935,177...98,001,240
Ensembl chr12:101,342,113...101,405,844
JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15470153) Ensembl
MGI
PMID:15470153 GO_REF:0000107 NCBI chr 6:32,999,408...33,033,067
Ensembl chr 6:34,110,652...34,144,490
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:23974706 RGD:11570553 NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:109,469,750...109,684,086
Ensembl chr 6:113,545,944...113,604,451
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO (PMID:22820466) ARUK-UCL PMID:22820466 NCBI chr12:13,543,104...13,987,437
Ensembl chr12:13,969,387...14,388,799
JBrowse link
G PRNP prion protein (Kanno blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:4,713,616...4,728,847
Ensembl chr20:4,523,155...4,523,916
JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM3 dynamin 3 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 1:147,339,773...147,916,513
Ensembl chr 1:151,049,346...151,615,808
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 ISO RGD PMID:20531346 RGD:11251757 NCBI chr 6:15,377,263...15,523,317
Ensembl chr 6:15,741,698...15,887,256
JBrowse link
G EFNA1 ephrin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,475,128...130,482,531
Ensembl chr 1:134,083,855...134,091,228
JBrowse link
G NGEF neuronal guanine nucleotide exchange factor involved_in ISO (PMID:17143272) UniProt PMID:17143272 NCBI chr2B:120,110,441...120,153,934
Ensembl chr2B:239,027,286...239,155,874
JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) CACAO PMID:21808020 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605
JBrowse link
G TWF1 twinfilin actin binding protein 1 ISO RGD PMID:33963280 RGD:596938166 NCBI chr12:44,925,701...44,938,344
Ensembl chr12:45,794,763...45,807,404
JBrowse link
G UBE3A ubiquitin protein ligase E3A ISO RGD PMID:25867122 RGD:11079590 NCBI chr15:4,494,029...4,595,415
Ensembl chr15:22,747,075...22,825,459
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:35420982) UniProt PMID:35420982 NCBI chr12:7,260,361...7,288,903
Ensembl chr12:7,175,951...7,204,526
JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 ISO RGD PMID:23769722 RGD:152975632 NCBI chr 4:78,893,598...79,118,745
Ensembl chr 4:89,623,271...89,847,616
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:29,538,723...29,542,625
Ensembl chr16:48,427,645...48,430,512
JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTN pleiotrophin ISO RGD PMID:7722643 RGD:9834945 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFL1 cofilin 1 ISO RGD PMID:26169356 RGD:11074527 NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO (PMID:24259049) Alzheimers_University_of_Toronto PMID:24259049 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30902970) MGI
Ensembl
PMID:30902970 GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:29643768) ARUK-UCL PMID:29643768 NCBI chr10:48,950,704...48,953,815
Ensembl chr10:51,084,027...51,089,776
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:91,143,240...91,322,040
Ensembl chr 6:94,392,353...94,566,716
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 ISO RGD PMID:23358245 RGD:9743980 NCBI chr 6:37,197,192...37,264,426
Ensembl chr 6:38,394,341...38,453,604
JBrowse link
G NEGR1 neuronal growth regulator 1 ISO RGD PMID:19711485 RGD:596948412 NCBI chr 1:70,628,093...71,503,114
Ensembl chr 1:72,613,516...73,484,240
JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr 8:137,330,777...137,677,306
Ensembl chr 8:140,412,773...140,684,898
JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:27893610 RGD:243048440 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:27893610 RGD:243048440 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308
JBrowse link
G TLR2 toll like receptor 2 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G WNT5A Wnt family member 5A involved_in ISO (PMID:18986540) BHF-UCL PMID:18986540 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,336,764...43,349,787
Ensembl chr17:48,070,223...48,082,499
JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in ISO (PMID:19900895) UniProt PMID:19900895 NCBI chr17:17,680,415...17,685,053 JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23407945) Ensembl
MGI
PMID:23407945 GO_REF:0000107 NCBI chr14:5,141,699...5,156,021
Ensembl chr14:23,266,702...23,279,249
JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGRMC1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:108,282,958...108,291,187
Ensembl chr  X:118,711,495...118,719,714
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24328732) Alzheimers_University_of_Toronto
Ensembl
PMID:24328732 GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:30206770 RGD:405650589 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018 NCBI chr 9:108,198,350...108,228,887
Ensembl chr 9:137,168,722...137,197,382
JBrowse link
G INS insulin involved_in ISO (PMID:19188609) ARUK-UCL PMID:19188609 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666
JBrowse link
G NEDD9 neural precursor cell expressed, developmentally down-regulated 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,022,321...11,071,747
Ensembl chr 6:11,297,701...11,420,186
JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chr20:43,540,819...43,701,322
Ensembl chr20:44,624,487...44,772,032
JBrowse link
G ZNF804A zinc finger protein 804A involved_in ISO PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chr2B:71,872,807...72,216,720
Ensembl chr2B:189,942,181...190,019,736
JBrowse link
positive regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 ISO RGD PMID:23441206 RGD:11530033 NCBI chr2A:65,289,675...65,333,219
Ensembl chr2A:66,413,011...66,456,857
JBrowse link
G ACTR3 actin related protein 3 ISO RGD PMID:23441206 RGD:11530033 NCBI chr2B:827,184...900,424
Ensembl chr2B:114,373,392...114,445,729
JBrowse link
G AFDN afadin, adherens junction formation factor ISO RGD PMID:22948147 RGD:13838731 NCBI chr 6:165,778,026...165,923,685
Ensembl chr 6:170,775,904...170,882,784
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15673667 RGD:9684988 NCBI chr17:75,460,491...75,542,700
Ensembl chr17:81,187,021...81,269,714
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr 7:44,930,859...45,040,078
Ensembl chr 7:45,001,267...45,110,342
JBrowse link
G CAPRIN1 cell cycle associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,023,981...34,079,335
Ensembl chr11:33,902,072...33,957,134
JBrowse link
G CAPRIN2 caprin family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:55,529,976...55,575,375
Ensembl chr12:58,157,568...58,202,690
JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase ISO RGD PMID:18606847 RGD:11576294 NCBI chr  X:33,967,329...34,374,385
Ensembl chr  X:41,659,295...42,066,570
JBrowse link
G CUX2 cut like homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,600,286...108,975,588
Ensembl chr12:112,175,555...112,311,221
JBrowse link
G DBN1 drebrin 1 involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:19174472 GO_REF:0000107 GO_REF:0000118 RGD:10398809 NCBI chr 5:172,758,316...172,774,974
Ensembl chr 5:179,820,791...179,836,872
JBrowse link
G DBNL drebrin like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:44,753,062...44,775,717
Ensembl chr 7:44,824,608...44,845,891
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G DNM1L dynamin 1 like ISO RGD PMID:19605646 RGD:7800727 NCBI chr12:53,476,553...53,541,421
Ensembl chr12:56,077,504...56,142,376
JBrowse link
G EEF2K eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chr16:16,443,579...16,526,061
Ensembl chr16:22,537,518...22,596,091
JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:21364901 RGD:127285794 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118
JBrowse link
G GPRASP3 G protein-coupled receptor associated sorting protein family member 3 involved_in ISO (PMID:21199326) UniProt PMID:21199326 NCBI chr  X:91,944,691...91,978,289 JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr  X:21,180,693...22,548,122
Ensembl chr  X:28,950,521...30,109,286
JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr15:20,434,532...20,444,389
Ensembl chr15:38,675,600...38,684,779
JBrowse link
G KALRN kalirin RhoGEF kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19625617) Ensembl
MGI
PMID:19625617 GO_REF:0000107 NCBI chr 3:121,138,136...121,828,723
Ensembl chr 3:128,225,413...128,720,441
JBrowse link
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:52,515,534...52,600,390
Ensembl chr 1:54,114,909...54,199,452
JBrowse link
G MAPRE3 microtubule associated protein RP/EB family member 3 ISO RGD PMID:31092585 RGD:597538596 NCBI chr2A:26,970,010...27,026,223
Ensembl chr2A:27,102,780...27,115,223
JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate ISO RGD PMID:16202710 RGD:9685333 NCBI chr 6:111,647,847...111,653,821 JBrowse link
G MFN1 mitofusin 1 ISO RGD PMID:19605646 RGD:7800727 NCBI chr 3:176,378,175...176,423,943
Ensembl chr 3:184,552,108...184,596,763
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:19605646 RGD:7800727 NCBI chr 1:10,729,933...10,764,865
Ensembl chr 1:11,945,880...11,981,077
JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:19605646 RGD:7800727 NCBI chr 3:190,890,242...190,995,133
Ensembl chr 3:201,207,607...201,312,358
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 ISO RGD PMID:18481281 RGD:7775053 NCBI chr  X:100,060,647...100,345,491
Ensembl chr  X:110,672,664...110,797,992
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,113,171...10,420,732
Ensembl chr 9:8,288,569...8,831,227
JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037
JBrowse link
G SLC30A1 solute carrier family 30 member 1 ISO RGD PMID:25319628 RGD:11057402 NCBI chr 1:187,139,544...187,147,113 JBrowse link
G SRCIN1 SRC kinase signaling inhibitor 1 ISO RGD PMID:31092585 RGD:597538596 NCBI chr17:18,666,094...18,742,015
Ensembl chr17:18,942,084...19,015,744
JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chr 8:69,958,735...70,283,591
Ensembl chr 8:71,606,583...71,929,167
JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 ISO RGD PMID:16474385 RGD:10043325 NCBI chr21:17,483,273...17,925,301
Ensembl chr21:30,868,308...31,016,883
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,489,446...131,519,864
Ensembl chr 1:135,321,288...135,350,724
JBrowse link
G VSTM5 V-set and transmembrane domain containing 5 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:88,840,020...88,873,107
Ensembl chr11:92,327,030...92,359,082
JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:35420982) UniProt PMID:35420982 NCBI chr12:7,260,361...7,288,903
Ensembl chr12:7,175,951...7,204,526
JBrowse link
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,489,446...131,519,864
Ensembl chr 1:135,321,288...135,350,724
JBrowse link
G SEMA4D semaphorin 4D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,451,420...60,588,519
Ensembl chr 9:88,497,528...88,560,811
JBrowse link
positive regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTN1 dynactin subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:74,428,060...74,458,574
Ensembl chr2A:75,934,752...75,953,296
JBrowse link
G SLC18A3 solute carrier family 18 member A3 involved_in ISO (PMID:19635813) UniProt PMID:19635813 NCBI chr10:44,630,006...44,632,419 JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EFNB3 ephrin B3 ISO RGD PMID:17626212 RGD:152995392 NCBI chr17:7,737,297...7,743,732
Ensembl chr17:7,724,983...7,731,270
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
positive regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO (PMID:24259049) ARUK-UCL PMID:24259049 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,808,090...46,868,649
Ensembl chr11:47,366,321...47,411,105
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 ISO RGD PMID:18430734 RGD:2306201 NCBI chr2B:827,184...900,424
Ensembl chr2B:114,373,392...114,445,729
JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 8:139,154,065...139,251,115
Ensembl chr 8:142,220,827...142,301,070
JBrowse link
G ADGRB2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 1:31,010,807...31,047,780
Ensembl chr 1:32,028,554...32,060,582
JBrowse link
G ADGRB3 adhesion G protein-coupled receptor B3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 6:66,484,739...67,238,607
Ensembl chr 6:69,788,604...70,536,820
JBrowse link
G ADGRE5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr19:13,944,894...13,972,041
Ensembl chr19:14,788,568...14,815,663
JBrowse link
G ADGRL1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr19:13,713,395...13,772,360
Ensembl chr19:14,439,730...14,475,877
JBrowse link
G ADGRL2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 1:80,506,240...81,189,353
Ensembl chr 1:83,086,465...83,317,446
JBrowse link
G ADGRL3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 4:61,876,694...62,742,354
Ensembl chr 4:68,323,404...69,003,093
JBrowse link
G ADNP activity dependent neuroprotector homeobox ISO RGD PMID:15800376 RGD:2312779 NCBI chr20:47,233,696...47,276,075
Ensembl chr20:48,361,043...48,400,387
JBrowse link
G AMIGO1 adhesion molecule with Ig like domain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 1:111,881,753...111,887,308
Ensembl chr 1:111,113,632...111,115,113
JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr12:41,652,954...41,656,393
Ensembl chr12:42,525,858...42,527,426
JBrowse link
G AMIGO3 adhesion molecule with Ig like domain 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 3:49,648,967...49,652,285
Ensembl chr 3:50,885,925...50,887,439
JBrowse link
G ASIC2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19571134) Ensembl
MGI
PMID:19571134 GO_REF:0000107 NCBI chr17:22,628,322...23,774,249 JBrowse link
G BDNF brain derived neurotrophic factor involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21356198) Ensembl
MGI
PMID:21356198 GO_REF:0000107 NCBI chr16:29,538,723...29,542,625
Ensembl chr16:48,427,645...48,430,512
JBrowse link
G CBLN2 cerebellin 2 precursor acts_upstream_of_or_within ISO (PMID:21356198) MGI PMID:21356198 NCBI chr18:65,906,154...66,010,195 JBrowse link
G CLSTN1 calsyntenin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
TreeGrafter
MGI
PMID:24613359 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:8,495,571...8,591,613
Ensembl chr 1:9,724,743...9,774,760
JBrowse link
G CLSTN2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
TreeGrafter
MGI
PMID:24613359 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:136,971,615...137,612,365
Ensembl chr 3:144,571,706...145,199,768
JBrowse link
G CLSTN3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
TreeGrafter
MGI
PMID:24613359 GO_REF:0000107 GO_REF:0000118 NCBI chr12:7,260,361...7,288,903
Ensembl chr12:7,175,951...7,204,526
JBrowse link
G CUX2 cut like homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,600,286...108,975,588
Ensembl chr12:112,175,555...112,311,221
JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 ISO RGD PMID:26738857 RGD:243048441 NCBI chr17:7,219,911...7,247,509
Ensembl chr17:7,207,483...7,235,985
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:74,311,249...74,447,312
Ensembl chr10:76,972,573...77,110,115
JBrowse link
G EEF2K eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chr16:16,443,579...16,526,061
Ensembl chr16:22,537,518...22,596,091
JBrowse link
G EFNA5 ephrin A5 involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chr 5:102,732,268...103,026,746
Ensembl chr 5:108,548,927...108,598,942
JBrowse link
G EPHB1 EPH receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:131,841,459...132,309,082
Ensembl chr 3:139,313,387...139,776,802
JBrowse link
G EPHB2 EPH receptor B2 involved_in ISO
IEA
RGD
Ensembl
PMID:21364901 GO_REF:0000107 RGD:127285794 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118
JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,604,188...181,624,744
Ensembl chr 3:190,089,522...190,104,905
JBrowse link
G FLRT1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
Ensembl
PMID:24613359 GO_REF:0000107 NCBI chr11:59,393,536...59,477,611
Ensembl chr11:62,820,380...62,822,404
JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr14:66,114,208...66,738,948
Ensembl chr14:85,572,250...85,574,232
JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr20:14,294,903...14,310,584
Ensembl chr20:14,281,522...14,283,471
JBrowse link
G GHRL ghrelin and obestatin prepropeptide acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16491079) MGI
Ensembl
PMID:16491079 GO_REF:0000107 NCBI chr 3:10,221,829...10,229,229
Ensembl chr 3:10,573,537...10,580,723
JBrowse link
G GPRASP3 G protein-coupled receptor associated sorting protein family member 3 involved_in ISO (PMID:21199326) UniProt PMID:21199326 NCBI chr  X:91,944,691...91,978,289 JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:84,663,030...86,170,778
Ensembl chr 4:95,339,460...96,807,748
JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:187,535,880...187,680,628
Ensembl chr 3:196,089,208...196,231,379
JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:25908590) UniProt PMID:25908590 NCBI chr  X:21,180,693...22,548,122
Ensembl chr  X:28,950,521...30,109,286
JBrowse link
G IQSEC1 IQ motif and Sec7 domain ArfGEF 1 ISO RGD PMID:26884337 RGD:11560558 NCBI chr 3:12,820,552...13,202,925
Ensembl chr 3:13,167,299...13,235,285
JBrowse link
G IQSEC2 IQ motif and Sec7 domain ArfGEF 2 ISO RGD PMID:26884337 RGD:11560558 NCBI chr  X:45,447,977...45,535,836
Ensembl chr  X:53,557,563...53,644,737
JBrowse link
G LINGO2 leucine rich repeat and Ig domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 9:27,760,276...29,008,800
Ensembl chr 9:28,377,472...28,379,292
JBrowse link
G LINGO4 leucine rich repeat and Ig domain containing 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 1:127,154,152...127,164,591
Ensembl chr 1:130,803,557...130,805,338
JBrowse link
G LRRC24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359
G LRRC26 leucine rich repeat containing 26 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:108,228,889...108,230,178
Ensembl chr 9:137,198,298...137,199,602
JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr19:47,481,678...47,533,446
Ensembl chr19:56,381,130...56,423,084
JBrowse link
G LRRN1 leucine rich repeat neuronal 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 3:3,743,026...3,993,794
Ensembl chr 3:3,895,540...3,897,690
JBrowse link
G LRRN3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 7:103,072,402...103,106,880
Ensembl chr 7:115,819,307...115,821,433
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr2A:80,376,582...80,392,899
Ensembl chr2A:81,953,891...81,955,459
JBrowse link
G LRRTM2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 5:134,247,933...134,254,188 JBrowse link
G LRRTM3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr10:63,407,003...63,594,210
Ensembl chr10:65,722,425...65,893,608
JBrowse link
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr2A:76,830,224...77,616,298
Ensembl chr2A:79,123,161...79,183,506
JBrowse link
G LRTM1 leucine rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr 3:54,858,452...54,868,183
Ensembl chr 3:56,078,764...56,085,634
JBrowse link
G LRTM2 leucine rich repeats and transmembrane domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr12:1,932,851...1,949,485
Ensembl chr12:1,882,930...1,899,407
JBrowse link
G NLGN1 neuroligin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359)
(PMID:21356198)
MGI
Ensembl
PMID:21356198 PMID:24613359 GO_REF:0000107 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr17:7,438,853...7,454,014 JBrowse link
G NLGN3 neuroligin 3 involved_in ISO PMID:15797875
(PMID:21642956)
BHF-UCL
CACAO
PMID:15797875 PMID:21642956 RGD:8554205 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G NRXN1 neurexin 1 acts_upstream_of_or_within ISO (PMID:21356198) MGI PMID:21356198 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 Ensembl chr 1:136,007,476...136,047,355 JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chr15:66,566,219...66,953,279
Ensembl chr15:85,776,832...86,157,204
JBrowse link
G OPCML opioid binding protein/cell adhesion molecule like ISO RGD PMID:19711485 RGD:596948412 NCBI chr11:127,233,465...128,377,367 JBrowse link
G OXT oxytocin/neurophysin I prepropeptide ISO RGD PMID:16488155 RGD:2304173 NCBI chr20:3,157,246...3,159,013 JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:16488155 RGD:2304173 NCBI chr 3:8,701,344...8,721,706 JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 5:45,701,219...45,786,652
Ensembl chr 5:47,267,286...47,350,960
JBrowse link
G PRKCA protein kinase C alpha ISO RGD PMID:18073185 RGD:2293299 NCBI chr17:60,246,485...60,747,158
Ensembl chr17:65,454,907...65,947,903
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,113,171...10,420,732
Ensembl chr 9:8,288,569...8,831,227
JBrowse link
G SLIT2 slit guidance ligand 2 ISO RGD PMID:26738857 RGD:243048441 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
TreeGrafter
MGI
PMID:24613359 GO_REF:0000107 GO_REF:0000118 NCBI chr13:65,081,844...65,087,135
Ensembl chr13:84,253,287...84,256,069
JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
TreeGrafter
PMID:24613359 GO_REF:0000118 NCBI chr  X:134,853,269...134,865,281
Ensembl chr  X:145,235,542...145,238,079
JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
TreeGrafter
MGI
PMID:24613359 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:162,207,530...162,223,830
Ensembl chr 3:170,265,342...170,268,275
JBrowse link
G SLITRK4 SLIT and NTRK like family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
TreeGrafter
PMID:24613359 GO_REF:0000118 NCBI chr  X:132,750,454...132,763,782
Ensembl chr  X:143,138,515...143,141,028
JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24613359) MGI
TreeGrafter
PMID:24613359 GO_REF:0000118 NCBI chr13:68,810,639...68,831,189
Ensembl chr13:87,980,905...87,983,781
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
TreeGrafter
MGI
PMID:24613359 GO_REF:0000107 GO_REF:0000118 NCBI chr13:66,990,025...67,003,900
Ensembl chr13:86,161,905...86,164,430
JBrowse link
G SRPX2 sushi repeat containing protein X-linked 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:89,854,389...89,886,776
Ensembl chr  X:99,994,560...100,021,241
JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO RGD PMID:16887122 RGD:27372880 NCBI chr15:71,082,491...71,158,038
Ensembl chr15:90,279,509...90,354,173
JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chr 8:69,958,735...70,283,591
Ensembl chr 8:71,606,583...71,929,167
JBrowse link
G SYNDIG1 synapse differentiation inducing 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:24,402,471...24,629,365
Ensembl chr20:24,825,380...24,947,370
JBrowse link
G THBS2 thrombospondin 2 ISO RGD PMID:15707899 RGD:1580068 NCBI chr 6:167,290,482...167,329,319
Ensembl chr 6:172,130,727...172,169,028
JBrowse link
G TPBG trophoblast glycoprotein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24613359) Ensembl
MGI
PMID:24613359 GO_REF:0000107 NCBI chr 6:80,265,172...80,273,022
Ensembl chr 6:83,530,571...83,531,915
JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chr 8:44,435,496...44,488,517
Ensembl chr 8:41,856,429...41,878,320
JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9405095) Ensembl
MGI
PMID:9405095 GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386
JBrowse link
positive regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANAPC2 anaphase promoting complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:108,234,949...108,248,227
Ensembl chr 9:137,204,356...137,217,652
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr 7:44,930,859...45,040,078
Ensembl chr 7:45,001,267...45,110,342
JBrowse link
G CDC20 cell division cycle 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:42,660,338...42,664,618
Ensembl chr 1:44,039,971...44,044,497
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756
JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22153079) UniProt PMID:22153079 NCBI chr10:100,093,614...100,192,485 JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in ISO (PMID:16504944) UniProt PMID:16504944 NCBI chr17:17,680,415...17,685,053 JBrowse link
G NRXN1 neurexin 1 acts_upstream_of_or_within ISO (PMID:19567877) MGI PMID:19567877 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037
JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578
JBrowse link
positive regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMK1 calcium/calmodulin dependent protein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:9,708,782...9,721,433
Ensembl chr 3:9,945,609...9,959,560
JBrowse link
G CDC42 cell division cycle 42 ISO RGD PMID:21423166 RGD:5688281 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G FRMPD4 FERM and PDZ domain containing 4 involved_in ISO (PMID:19118189) UniProt PMID:19118189 NCBI chr  X:4,450,486...5,336,784
Ensembl chr  X:12,399,479...12,622,978
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21167025) BHF-UCL PMID:21167025 NCBI chr22:30,951,866...30,973,608 JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin involved_in ISO (PMID:10402191) UniProt PMID:10402191 Ensembl chr 1:936,000...966,808 JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO RGD PMID:14749715 RGD:2317108 NCBI chr 9:81,814,766...81,947,341
Ensembl chr 9:109,980,748...110,107,480
JBrowse link
regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD17B abhydrolase domain containing 17B, depalmitoylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:52,900,834...52,946,917
Ensembl chr 9:70,606,487...70,654,637
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:23921129) ARUK-UCL PMID:23921129 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G FCGR2B Fc gamma receptor IIb involved_in ISO (PMID:23921129) ARUK-UCL PMID:23921129 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637
JBrowse link
G HOMER1 homer scaffold protein 1 involved_in ISO PMID:19345194 UniProt PMID:19345194 RGD:8553291 NCBI chr 5:35,794,627...35,936,111
Ensembl chr 5:36,064,665...36,205,928
JBrowse link
G VPS35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link
regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISO (PMID:15572692) UniProt PMID:15572692 NCBI chr2B:90,561,708...90,663,072
Ensembl chr2B:208,702,092...208,797,499
JBrowse link
G ABI3BP ABI family member 3 binding protein involved_in ISO PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr 3:97,842,070...98,086,311
Ensembl chr 3:104,523,470...104,765,688
JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 ISO RGD PMID:22328515 RGD:13703034 NCBI chr15:37,562,930...37,717,175
Ensembl chr15:55,873,606...56,027,188
JBrowse link
G ARC activity regulated cytoskeleton associated protein involved_in ISO PMID:15537891 ARUK-UCL PMID:15537891 RGD:13210528 NCBI chr 8:139,320,366...139,323,802
Ensembl chr 8:142,367,995...142,369,185
JBrowse link
G ARHGAP33 Rho GTPase activating protein 33 ISO RGD PMID:24003235 RGD:13508596 NCBI chr19:32,704,877...32,710,778
Ensembl chr19:41,439,010...41,452,173
JBrowse link
G ARHGAP44 Rho GTPase activating protein 44 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:38,657,824...38,859,591
Ensembl chr17:43,357,438...43,453,457
JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232
JBrowse link
G CFL1 cofilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
JBrowse link
G DNM3 dynamin 3 ISO RGD PMID:15741233 RGD:8554738 NCBI chr 1:147,339,773...147,916,513
Ensembl chr 1:151,049,346...151,615,808
JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790
JBrowse link
G KIF1A kinesin family member 1A involved_in ISO PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr2B:127,969,494...128,078,282
Ensembl chr2B:246,778,679...246,860,326
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G LZTS3 leucine zipper tumor suppressor family member 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:3,248,955...3,259,932
Ensembl chr20:3,011,611...3,022,573
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) BHF-UCL PMID:21808020 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 4:86,814,136...87,030,605
Ensembl chr 4:97,486,566...97,702,060
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:78,768,756...79,271,630
Ensembl chr12:81,879,812...82,376,917
JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chr 7:86,863,919...87,251,634
Ensembl chr 7:100,455,357...100,833,220
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21795692) BHF-UCL PMID:21795692 NCBI chr22:30,951,866...30,973,608 JBrowse link
G SIPA1L1 signal induced proliferation associated 1 like 1 involved_in ISO PMID:11502259 UniProt PMID:11502259 RGD:8554032 NCBI chr14:51,909,444...52,328,719
Ensembl chr14:71,038,600...71,192,916
JBrowse link
G SRCIN1 SRC kinase signaling inhibitor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:18,666,094...18,742,015
Ensembl chr17:18,942,084...19,015,744
JBrowse link
G TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:57,037,330...57,509,229
Ensembl chr17:62,239,230...62,650,299
JBrowse link
G ZDHHC15 zinc finger DHHC-type palmitoyltransferase 15 involved_in ISO PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chr  X:64,624,908...64,777,305
Ensembl chr  X:74,737,281...74,889,055
JBrowse link
regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:32434929) UniProt PMID:32434929 NCBI chr12:7,260,361...7,288,903
Ensembl chr12:7,175,951...7,204,526
JBrowse link
regulation of excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNK13 potassium two pore domain channel subfamily K member 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:70,678,256...70,803,575
Ensembl chr14:90,032,219...90,154,687
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHFPL4 LHFPL tetraspan subfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:9,453,628...9,506,434
Ensembl chr 3:9,695,091...9,745,722
JBrowse link
regulation of modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin involved_in ISO PMID:29317530 SynGO PMID:29317530 RGD:405650325 NCBI chr  X:101,907,032...101,973,052
Ensembl chr  X:112,362,633...112,428,216
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 involved_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr17:75,460,491...75,542,700
Ensembl chr17:81,187,021...81,269,714
JBrowse link
G CAP2 cyclase associated actin cytoskeleton regulatory protein 2 involved_in ISO PMID:33094279 SynGO PMID:33094279 RGD:405650308 NCBI chr 6:17,248,751...17,411,593
Ensembl chr 6:17,608,046...17,770,160
JBrowse link
G CTTNBP2 cortactin binding protein 2 involved_in ISO PMID:22262902 SynGO PMID:22262902 RGD:13702362 NCBI chr 7:109,675,275...109,837,178
Ensembl chr 7:122,370,616...122,520,397
JBrowse link
G CYFIP1 cytoplasmic FMR1 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:20,462,811...20,573,684 JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in ISO (PMID:31600191) SynGO PMID:31600191 NCBI chr21:32,921,019...33,034,988
Ensembl chr21:46,060,713...46,168,885
JBrowse link
G ITSN1 intersectin 1 involved_in ISO PMID:19258322 SynGO PMID:19258322 RGD:13461864 NCBI chr21:20,009,385...20,266,835
Ensembl chr21:33,457,081...33,625,248
JBrowse link
G KALRN kalirin RhoGEF kinase involved_in ISO PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chr 3:121,138,136...121,828,723
Ensembl chr 3:128,225,413...128,720,441
JBrowse link
G LIMK1 LIM domain kinase 1 involved_in ISO PMID:25884247 SynGO PMID:25884247 RGD:405650283 Ensembl chr 7:81,231,876...81,271,282 JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate involved_in ISO PMID:16202710 SynGO PMID:16202710 RGD:9685333 NCBI chr 6:111,647,847...111,653,821 JBrowse link
G MYH10 myosin heavy chain 10 involved_in ISO PMID:20797537 SynGO PMID:20797537 RGD:12050124 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192
JBrowse link
G PRMT8 protein arginine methyltransferase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:3,614,041...3,710,411
Ensembl chr12:3,429,458...3,634,507
JBrowse link
G PTK2 protein tyrosine kinase 2 involved_in ISO (PMID:19553453) SynGO PMID:19553453 NCBI chr 8:137,330,777...137,677,306
Ensembl chr 8:140,412,773...140,684,898
JBrowse link
G RHOA ras homolog family member A involved_in ISO (PMID:21423166) SynGO PMID:21423166 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 involved_in ISO PMID:15721239 SynGO PMID:15721239 RGD:12050147 NCBI chr21:17,483,273...17,925,301
Ensembl chr21:30,868,308...31,016,883
JBrowse link
regulation of modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 involved_in ISO PMID:27713690 SynGO PMID:27713690 RGD:405650302 NCBI chr2B:122,722,529...123,363,009
Ensembl chr2B:241,802,544...242,216,166
JBrowse link
G ANK3 ankyrin 3 involved_in ISO PMID:25374361 SynGO PMID:25374361 RGD:405650220 NCBI chr10:56,560,589...57,269,952
Ensembl chr10:58,790,696...59,602,954
JBrowse link
G CAMKV CaM kinase like vesicle associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,789,838...49,801,795
Ensembl chr 3:51,026,111...51,038,064
JBrowse link
G CD44 CD44 molecule (IN blood group) involved_in ISO PMID:27798233 SynGO PMID:27798233 RGD:405650378 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009
JBrowse link
G CDC42 cell division cycle 42 involved_in ISO PMID:21423166 SynGO PMID:21423166 RGD:5688281 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in ISO PMID:25698751 SynGO PMID:25698751 RGD:13702150 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241
JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,915,541...206,976,656 JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:23864697 SynGO PMID:23864697 RGD:13702314 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G MRTFA myocardin related transcription factor A involved_in ISO PMID:29335431 SynGO PMID:29335431 RGD:405650348 NCBI chr22:21,314,829...21,536,673
Ensembl chr22:39,413,002...39,467,402
JBrowse link
G MRTFB myocardin related transcription factor B involved_in ISO PMID:29335431 SynGO PMID:29335431 RGD:405650348 NCBI chr16:12,999,165...13,195,012
Ensembl chr16:14,493,351...14,613,860
JBrowse link
G MYO5B myosin VB involved_in ISO PMID:18984164 SynGO PMID:18984164 RGD:11533643 NCBI chr18:43,207,387...43,575,951
Ensembl chr18:46,555,259...46,786,223
JBrowse link
G NF1 neurofibromin 1 involved_in ISO PMID:24431436 SynGO PMID:24431436 RGD:155230796 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295
JBrowse link
G PHACTR1 phosphatase and actin regulator 1 involved_in ISO PMID:32975518 SynGO PMID:32975518 RGD:405650326 NCBI chr 6:12,560,862...13,136,126
Ensembl chr 6:12,922,871...13,505,609
JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:26490870) SynGO PMID:26490870 NCBI chr 4:151,419,402...151,680,769
Ensembl chr 4:163,316,396...163,487,495
JBrowse link
G RHOA ras homolog family member A involved_in ISO (PMID:21423166) SynGO PMID:21423166 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G RHOB ras homolog family member B involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:20,433,576...20,435,986
Ensembl chr2A:20,549,254...20,549,844
JBrowse link
G STRN striatin involved_in ISO PMID:29802198 SynGO PMID:29802198 RGD:405650211 NCBI chr2A:36,870,487...36,993,103
Ensembl chr2A:37,637,543...37,713,550
JBrowse link
G STRN4 striatin 4 involved_in ISO PMID:28442576 SynGO PMID:28442576 RGD:405650263 NCBI chr19:43,711,834...43,738,742
Ensembl chr19:52,240,880...52,260,241
JBrowse link
regulation of modification of synapse structure, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF5B kinesin family member 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,138,964...32,186,448
Ensembl chr10:32,731,150...32,778,242
JBrowse link
G ZDHHC17 zinc finger DHHC-type palmitoyltransferase 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:74,281,716...74,371,885
Ensembl chr12:77,132,723...77,222,509
JBrowse link
regulation of modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941
JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790
JBrowse link
G GRIPAP1 GRIP1 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:41,271,762...41,300,327
Ensembl chr  X:49,128,760...49,157,059
JBrowse link
G LOC117978823 battenin involved_in ISO (PMID:29780879) UniProt PMID:29780879
regulation of postsynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor involved_in ISO (PMID:29969655) SynGO PMID:29969655 NCBI chr 6:165,778,026...165,923,685
Ensembl chr 6:170,775,904...170,882,784
JBrowse link
G ARHGAP12 Rho GTPase activating protein 12 involved_in ISO PMID:26854232 SynGO PMID:26854232 RGD:11572714 NCBI chr10:31,932,294...32,061,450
Ensembl chr10:32,527,838...32,628,690
JBrowse link
G ARHGAP33 Rho GTPase activating protein 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,704,877...32,710,778
Ensembl chr19:41,439,010...41,452,173
JBrowse link
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,336,764...43,349,787
Ensembl chr17:48,070,223...48,082,499
JBrowse link
G ASIC1 acid sensing ion channel subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,672,253...38,698,247 JBrowse link
G ASIC2 acid sensing ion channel subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,628,322...23,774,249 JBrowse link
G CARMIL3 capping protein regulator and myosin 1 linker 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,830,041...4,847,897
Ensembl chr14:22,954,274...22,971,981
JBrowse link
G CC2D1A coiled-coil and C2 domain containing 1A involved_in ISO (PMID:26826102) SynGO PMID:26826102 NCBI chr19:13,468,650...13,493,308 JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:22153079) SynGO PMID:22153079 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G CRMP1 collapsin response mediator protein 1 involved_in ISO (PMID:18003833) SynGO PMID:18003833 Ensembl chr 4:5,900,971...5,969,910 JBrowse link
G CYFIP2 cytoplasmic FMR1 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:152,667,136...152,796,575
Ensembl chr 5:159,292,029...159,418,077
JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:16,988,340...17,342,911
Ensembl chr13:35,425,382...35,768,935
JBrowse link
G DCX doublecortin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582
JBrowse link
G DOCK1 dedicator of cytokinesis 1 involved_in ISO (PMID:21900250) SynGO PMID:21900250 NCBI chr10:123,485,345...124,041,337
Ensembl chr10:127,803,236...128,288,897
JBrowse link
G DOCK10 dedicator of cytokinesis 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:112,006,479...112,283,939
Ensembl chr2B:230,578,452...230,854,877
JBrowse link
G DOCK4 dedicator of cytokinesis 4 involved_in ISO PMID:23536706 SynGO PMID:23536706 RGD:405650262 NCBI chr 7:103,697,418...104,169,469
Ensembl chr 7:116,400,535...116,871,755
JBrowse link
G DPYSL2 dihydropyrimidinase like 2 involved_in ISO PMID:29425794 SynGO PMID:29425794 RGD:405650303 NCBI chr 8:25,786,950...25,927,782
Ensembl chr 8:22,693,863...22,834,080
JBrowse link
G ELMO1 engulfment and cell motility 1 involved_in ISO PMID:21900250 SynGO PMID:21900250 RGD:405650271 NCBI chr 7:37,493,854...38,085,555 JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in ISO (PMID:21969592) SynGO PMID:21969592 NCBI chr 3:58,494,342...58,557,712
Ensembl chr 3:59,903,602...59,967,013
JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in ISO PMID:29983322 SynGO PMID:29983322 RGD:405650287 NCBI chr14:66,114,208...66,738,948
Ensembl chr14:85,572,250...85,574,232
JBrowse link
G GNA13 G protein subunit alpha 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,957,682...59,005,182 JBrowse link
G HTR4 5-hydroxytryptamine receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:143,918,925...144,208,779
Ensembl chr 5:149,889,969...150,108,357
JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in ISO PMID:23441206 SynGO PMID:23441206 RGD:11530033 NCBI chr15:69,076,025...69,190,082
Ensembl chr15:88,276,851...88,388,594
JBrowse link
G LOC100991557 palmitoyltransferase ZDHHC8 involved_in ISO (PMID:18836441) SynGO PMID:18836441 Ensembl chr22:18,571,565...18,581,117
Ensembl chr22:18,571,565...18,581,117
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,808,090...46,868,649
Ensembl chr11:47,366,321...47,411,105
JBrowse link
G LZTS1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:26490870) SynGO PMID:26490870 NCBI chr 8:19,471,361...19,529,437
Ensembl chr 8:16,418,496...16,476,111
JBrowse link
G LZTS3 leucine zipper tumor suppressor family member 3 involved_in ISO PMID:27252646 SynGO PMID:27252646 RGD:13210540 NCBI chr20:3,248,955...3,259,932
Ensembl chr20:3,011,611...3,022,573
JBrowse link
G MAP1B microtubule associated protein 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:43,102,739...43,204,978
Ensembl chr 5:43,701,530...43,803,393
JBrowse link
G MARK1 microtubule affinity regulating kinase 1 involved_in ISO (PMID:27829159) SynGO PMID:27829159 NCBI chr 1:196,114,714...196,251,166
Ensembl chr 1:201,150,310...201,286,201
JBrowse link
G NAE1 NEDD8 activating enzyme E1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,119,548...47,147,679
Ensembl chr16:66,221,829...66,246,865
JBrowse link
G NCKIPSD NCK interacting protein with SH3 domain involved_in ISO PMID:23342115 SynGO PMID:23342115 RGD:405650384 NCBI chr 3:48,586,112...48,606,811
Ensembl chr 3:49,676,282...49,688,548
JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:108,223,380...108,354,079
Ensembl chr 3:115,148,481...115,270,507
JBrowse link
G NEDD8 NEDD8 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,993,011...5,008,620
Ensembl chr14:23,117,271...23,132,249
JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22153079) SynGO PMID:22153079 NCBI chr10:100,093,614...100,192,485 JBrowse link
G NRXN2 neurexin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:59,959,917...60,078,093
Ensembl chr11:63,303,659...63,409,687
JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in ISO PMID:16394100 SynGO PMID:16394100 RGD:2302413 NCBI chr14:53,854,280...54,046,410
Ensembl chr14:72,714,555...72,798,037
JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in ISO PMID:16394100 SynGO PMID:16394100 RGD:2302413 NCBI chr19:37,710,882...37,734,873
Ensembl chr19:46,217,935...46,238,103
JBrowse link
G PALM paralemmin involved_in ISO PMID:18287537 SynGO PMID:18287537 RGD:8553517 NCBI chr19:386,417...427,178
Ensembl chr19:693,853...713,465
JBrowse link
G PCDH7 protocadherin 7 involved_in ISO PMID:32616769 SynGO PMID:32616769 RGD:405650241 NCBI chr 4:25,111,142...25,535,925
Ensembl chr 4:30,366,855...30,370,132
JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 SynGO PMID:19900557 RGD:8554803 NCBI chr 4:86,814,136...87,030,605
Ensembl chr 4:97,486,566...97,702,060
JBrowse link
G PPP1R9B protein phosphatase 1 regulatory subunit 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,224,007...44,240,906
Ensembl chr17:49,098,089...49,126,932
JBrowse link
G PSD pleckstrin and Sec7 domain containing involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr10:99,006,102...99,023,411
Ensembl chr10:102,472,583...102,486,226
JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 involved_in ISO PMID:22844492 SynGO PMID:22844492 RGD:405650356 NCBI chr20:46,854,918...46,929,509
Ensembl chr20:47,983,098...48,057,421
JBrowse link
G PUM2 pumilio RNA binding family member 2 involved_in ISO PMID:20133610 SynGO PMID:20133610 RGD:405650299 NCBI chr2A:20,235,169...20,337,667
Ensembl chr2A:20,350,690...20,435,174
JBrowse link
G RAC1 Rac family small GTPase 1 involved_in ISO (PMID:31369617) SynGO PMID:31369617 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RAC3 Rac family small GTPase 3 involved_in ISO (PMID:31369617) SynGO PMID:31369617 NCBI chr17:76,436,264...76,439,492
Ensembl chr17:82,133,217...82,143,623
JBrowse link
G RHOG ras homolog family member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,698,179...3,712,402
Ensembl chr11:3,811,877...3,812,452
JBrowse link
G RTN4 reticulon 4 involved_in ISO (PMID:26748478) SynGO PMID:26748478 NCBI chr2A:55,129,272...55,207,031 JBrowse link
G RTN4R reticulon 4 receptor involved_in ISO (PMID:26748478) SynGO PMID:26748478 Ensembl chr22:18,673,548...18,680,017 JBrowse link
G S1PR2 sphingosine-1-phosphate receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:9,771,888...9,781,944
Ensembl chr19:10,436,502...10,437,563
JBrowse link
G SAMD4A sterile alpha motif domain containing 4A involved_in ISO PMID:22201125 SynGO PMID:22201125 RGD:405650281 NCBI chr14:35,153,002...35,380,018
Ensembl chr14:53,566,636...53,654,151
JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:102,443,333...102,455,176
Ensembl chr2A:97,780,242...97,787,341
JBrowse link
G SENP1 SUMO specific peptidase 1 involved_in ISO PMID:29425794 SynGO PMID:29425794 RGD:405650303 NCBI chr12:40,624,200...40,689,837
Ensembl chr12:41,507,348...41,558,969
JBrowse link
G SIGMAR1 sigma non-opioid intracellular receptor 1 involved_in ISO PMID:20018732 SynGO PMID:20018732 RGD:405650297 NCBI chr 9:34,471,362...34,474,459 JBrowse link
G SLC12A5 solute carrier family 12 member 5 involved_in ISO PMID:18093524 SynGO PMID:18093524 RGD:405650301 NCBI chr20:42,359,005...42,397,412
Ensembl chr20:43,445,182...43,483,132
JBrowse link
G SRGAP3 SLIT-ROBO Rho GTPase activating protein 3 involved_in ISO (PMID:21325512) SynGO PMID:21325512 NCBI chr 3:8,935,179...9,315,264
Ensembl chr 3:9,183,641...9,327,559
JBrowse link
G SYNDIG1 synapse differentiation inducing 1 involved_in ISO PMID:20152115 SynGO PMID:20152115 RGD:8554654 NCBI chr20:24,402,471...24,629,365
Ensembl chr20:24,825,380...24,947,370
JBrowse link
G TRIM47 tripartite motif containing 47 involved_in ISO PMID:36211980 SynGO PMID:36211980 RGD:405650257 NCBI chr17:69,824,959...69,829,442
Ensembl chr17:75,376,071...75,379,964
JBrowse link
G UBE2M ubiquitin conjugating enzyme E2 M involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:55,568,784...55,571,682
Ensembl chr19:64,382,141...64,385,421
JBrowse link
G UBE3B ubiquitin protein ligase E3B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:107,054,219...107,113,444
Ensembl chr12:110,455,011...110,506,216
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:31813652) SynGO PMID:31813652 NCBI chr  X:33,535,543...33,683,220
Ensembl chr  X:41,232,041...41,379,910
JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (PMID:26521016) SynGO PMID:26521016 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link
regulation of postsynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD17A abhydrolase domain containing 17A, depalmitoylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:875,447...883,977 JBrowse link
G ABHD17B abhydrolase domain containing 17B, depalmitoylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:52,900,834...52,946,917
Ensembl chr 9:70,606,487...70,654,637
JBrowse link
G ABHD17C abhydrolase domain containing 17C, depalmitoylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:59,676,295...59,736,771 JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:37,562,930...37,717,175
Ensembl chr15:55,873,606...56,027,188
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756
JBrowse link
G ARF4 ARF GTPase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,504,701...57,530,545
Ensembl chr 3:58,710,897...58,736,816
JBrowse link
G ARHGAP22 Rho GTPase activating protein 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,589,509...45,833,137 JBrowse link
G ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:126,688,608...127,080,662
Ensembl chr 8:129,418,796...130,021,261
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 involved_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr17:75,460,491...75,542,700
Ensembl chr17:81,187,021...81,269,714
JBrowse link
G CDC42 cell division cycle 42 involved_in ISO (PMID:25851601) SynGO PMID:25851601 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G CDKL5 cyclin dependent kinase like 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:11,047,357...11,261,172
Ensembl chr  X:18,492,329...18,638,735
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in ISO PMID:25698751 SynGO PMID:25698751 RGD:13702150 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241
JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 involved_in ISO (PMID:20335472), (PMID:23826333) SynGO PMID:20335472 PMID:23826333 NCBI chr14:39,231,910...39,242,353
Ensembl chr14:57,499,906...57,510,019
JBrowse link
G DGKB diacylglycerol kinase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:14,803,023...15,638,280
Ensembl chr 7:14,165,933...14,969,825
JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,180,513...207,594,684
Ensembl chr 1:212,265,520...212,612,079
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008
JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:91,143,240...91,322,040
Ensembl chr 6:94,392,353...94,566,716
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in ISO PMID:22516464 SynGO PMID:22516464 RGD:13702295 NCBI chr 3:10,221,829...10,229,229
Ensembl chr 3:10,573,537...10,580,723
JBrowse link
G GHSR growth hormone secretagogue receptor involved_in ISO PMID:22516464 SynGO PMID:22516464 RGD:13702295 NCBI chr 3:169,448,217...169,458,602
Ensembl chr 3:177,633,039...177,638,202
JBrowse link
G GRID1 glutamate ionotropic receptor delta type subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:82,017,436...82,795,410
Ensembl chr10:85,586,147...86,353,410
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in ISO PMID:24990929 SynGO PMID:24990929 RGD:10002784 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M involved_in ISO PMID:22238095 SynGO PMID:22238095 RGD:155230714 NCBI chr19:7,731,828...7,776,101
Ensembl chr19:8,579,211...8,624,029
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in ISO (PMID:28234934) SynGO PMID:28234934 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:21,180,693...22,548,122
Ensembl chr  X:28,950,521...30,109,286
JBrowse link
G ITSN1 intersectin 1 involved_in ISO PMID:19258322 SynGO PMID:19258322 RGD:13461864 NCBI chr21:20,009,385...20,266,835
Ensembl chr21:33,457,081...33,625,248
JBrowse link
G LRFN2 leucine rich repeat and fibronectin type III domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,972,362...40,167,612
Ensembl chr 6:41,282,940...41,477,073
JBrowse link
G MARK2 microtubule affinity regulating kinase 2 involved_in ISO PMID:22807451 SynGO PMID:22807451 RGD:155230723 NCBI chr11:59,195,852...59,268,391
Ensembl chr11:62,546,455...62,618,772
JBrowse link
G MINK1 misshapen like kinase 1 involved_in ISO PMID:21048137 SynGO PMID:21048137 RGD:8553980 NCBI chr17:4,879,851...4,944,374
Ensembl chr17:4,868,620...4,932,789
JBrowse link
G NCAN neurocan involved_in ISO (PMID:30356641) SynGO PMID:30356641 NCBI chr19:18,650,522...18,690,882
Ensembl chr19:19,657,766...19,691,998
JBrowse link
G NF1 neurofibromin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295
JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in ISO (PMID:25143608) SynGO PMID:25143608 NCBI chr 7:100,129,389...100,442,910
Ensembl chr 7:112,849,811...112,942,413
JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:92,911,721...93,027,032
Ensembl chr2B:211,042,324...211,157,547
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:100,060,647...100,345,491
Ensembl chr  X:110,672,664...110,797,992
JBrowse link
G PLPPR4 phospholipid phosphatase related 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:101,919,714...101,965,146
Ensembl chr 1:100,640,187...100,685,483
JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G PSEN2 presenilin 2 involved_in ISO (PMID:23083742) SynGO PMID:23083742 NCBI chr 1:202,328,987...202,354,440
Ensembl chr 1:207,320,937...207,346,295
JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F involved_in ISO PMID:15750591 SynGO PMID:15750591 RGD:1642736 NCBI chr 1:42,878,344...42,923,539
Ensembl chr 1:44,220,991...44,297,647
JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 involved_in ISO PMID:19734897 SynGO PMID:19734897 RGD:2314692 NCBI chr2B:60,022,738...60,339,981
Ensembl chr2B:177,655,733...177,793,644
JBrowse link
G RBMX RNA binding motif protein X-linked involved_in ISO PMID:22238095 SynGO PMID:22238095 RGD:155230714 NCBI chr  X:125,997,989...126,009,525
Ensembl chr  X:136,264,406...136,275,360
JBrowse link
G RHEB Ras homolog, mTORC1 binding involved_in ISO PMID:24889507 SynGO PMID:24889507 RGD:13702223 NCBI chr 7:143,054,747...143,108,011 JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 involved_in ISO PMID:26003414 SynGO PMID:26003414 RGD:11344299 NCBI chr 9:62,782,183...63,005,626
Ensembl chr 9:90,851,983...90,965,084
JBrowse link
G RPS6KA5 ribosomal protein S6 kinase A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,489,654...71,679,250
Ensembl chr14:90,840,655...91,028,780
JBrowse link
G SEMA3F semaphorin 3F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,083,733...50,117,518
Ensembl chr 3:51,318,089...51,351,958
JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 involved_in ISO PMID:21217644 SynGO PMID:21217644 RGD:13702145 NCBI chr11:65,570,677...66,268,139
Ensembl chr11:68,860,606...69,437,925
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO PMID:21217644 SynGO PMID:21217644 RGD:13702145 NCBI chr22:30,951,866...30,973,608 JBrowse link
G TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:46,251,797...46,521,577
Ensembl chr2B:163,729,504...163,895,940
JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:28065648 SynGO PMID:28065648 RGD:155230793 Ensembl chr16:30,347,229...30,366,743 JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 involved_in ISO PMID:15721239 SynGO PMID:15721239 RGD:12050147 NCBI chr21:17,483,273...17,925,301
Ensembl chr21:30,868,308...31,016,883
JBrowse link
G TSC2 TSC complex subunit 2 involved_in ISO PMID:24889507 SynGO PMID:24889507 RGD:13702223 NCBI chr16:615,776...655,411
Ensembl chr16:2,135,696...2,175,569
JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,077,630...10,089,499
Ensembl chr 3:10,430,143...10,440,234
JBrowse link
G WASL WASP like actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:115,675,170...115,741,498
Ensembl chr 7:128,360,495...128,385,393
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein involved_in ISO PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr 3:97,842,070...98,086,311
Ensembl chr 3:104,523,470...104,765,688
JBrowse link
G CASKIN1 CASK interacting protein 1 involved_in ISO (PMID:31727973) SynGO PMID:31727973 NCBI chr16:1,035,826...1,055,005 JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:29,538,723...29,542,625
Ensembl chr16:48,427,645...48,430,512
JBrowse link
G CRIPT CXXC repeat containing interactor of PDZ3 domain involved_in ISO PMID:10570482 SynGO PMID:10570482 RGD:8554363 NCBI chr2A:46,732,683...46,740,589
Ensembl chr2A:47,663,304...47,671,463
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:84,663,030...86,170,778
Ensembl chr 4:95,339,460...96,807,748
JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:187,535,880...187,680,628
Ensembl chr 3:196,089,208...196,231,379
JBrowse link
G LRFN1 leucine rich repeat and fibronectin type III domain containing 1 involved_in ISO PMID:16630835 SynGO PMID:16630835 RGD:13702351 NCBI chr19:36,405,065...36,419,178
Ensembl chr19:44,952,799...44,960,507
JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:62,214,340...62,217,742
Ensembl chr11:65,536,427...65,539,629
JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:47,481,678...47,533,446
Ensembl chr19:56,381,130...56,423,084
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chr2A:80,376,582...80,392,899
Ensembl chr2A:81,953,891...81,955,459
JBrowse link
G LRRTM2 leucine rich repeat transmembrane neuronal 2 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chr 5:134,247,933...134,254,188 JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:21410790) SynGO PMID:21410790 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,127,673...46,262,333
Ensembl chr12:47,100,393...47,126,102
JBrowse link
G PRICKLE2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) SynGO PMID:23711981 PMID:34613779 NCBI chr 3:63,995,566...64,347,679
Ensembl chr 3:65,377,760...65,723,662
JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,580,855...26,729,378
Ensembl chr 8:23,869,825...23,932,474
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,113,171...10,420,732
Ensembl chr 9:8,288,569...8,831,227
JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778
JBrowse link
G SIPA1L1 signal induced proliferation associated 1 like 1 involved_in ISO PMID:11502259 SynGO PMID:11502259 RGD:8554032 NCBI chr14:51,909,444...52,328,719
Ensembl chr14:71,038,600...71,192,916
JBrowse link
regulation of postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:21,210,001...21,435,919
Ensembl chr18:24,812,019...25,008,325
JBrowse link
G CRIPT CXXC repeat containing interactor of PDZ3 domain involved_in ISO PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr2A:46,732,683...46,740,589
Ensembl chr2A:47,663,304...47,671,463
JBrowse link
G DBN1 drebrin 1 ISO RGD PMID:12878700 RGD:10398728 NCBI chr 5:172,758,316...172,774,974
Ensembl chr 5:179,820,791...179,836,872
JBrowse link
G SLC30A1 solute carrier family 30 member 1 ISO RGD PMID:25319628 RGD:11057402 NCBI chr 1:187,139,544...187,147,113 JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chr20:43,540,819...43,701,322
Ensembl chr20:44,624,487...44,772,032
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G ARF6 ARF GTPase 6 involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr14:30,482,191...30,486,741
Ensembl chr14:48,789,329...48,789,856
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:29,538,723...29,542,625
Ensembl chr16:48,427,645...48,430,512
JBrowse link
G CLSTN3 calsyntenin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,260,361...7,288,903
Ensembl chr12:7,175,951...7,204,526
JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,351,938...181,372,776
Ensembl chr 3:189,833,490...189,855,060
JBrowse link
G FARP1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in ISO PMID:23209303 SynGO PMID:23209303 RGD:8554251 NCBI chr13:79,300,995...79,615,649
Ensembl chr13:98,522,235...98,761,085
JBrowse link
G FZD1 frizzled class receptor 1 involved_in ISO (PMID:19883499) SynGO PMID:19883499 NCBI chr 7:83,269,906...83,277,608 JBrowse link
G GPC4 glypican 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:122,441,290...122,555,192
Ensembl chr  X:132,746,519...132,860,420
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO PMID:20395510
PMID:21410790
SynGO PMID:20395510 PMID:21410790 RGD:13702257 RGD:13702347 NCBI chr 4:84,663,030...86,170,778
Ensembl chr 4:95,339,460...96,807,748
JBrowse link
G IGSF11 immunoglobulin superfamily member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:116,033,187...116,153,134
Ensembl chr 3:122,948,246...122,972,742
JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:187,535,880...187,680,628
Ensembl chr 3:196,089,208...196,231,379
JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:21,180,693...22,548,122
Ensembl chr  X:28,950,521...30,109,286
JBrowse link
G IL1RAPL2 interleukin 1 receptor accessory protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:93,689,575...94,904,887
Ensembl chr  X:104,161,023...105,283,494
JBrowse link
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chr19:32,852,993...32,863,240
Ensembl chr19:41,601,372...41,615,210
JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:62,214,340...62,217,742
Ensembl chr11:65,536,427...65,539,629
JBrowse link
G LRFN5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr14:22,185,289...22,480,641
Ensembl chr14:40,676,278...40,814,212
JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:47,481,678...47,533,446
Ensembl chr19:56,381,130...56,423,084
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chr2A:80,376,582...80,392,899
Ensembl chr2A:81,953,891...81,955,459
JBrowse link
G LRRTM3 leucine rich repeat transmembrane neuronal 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,407,003...63,594,210
Ensembl chr10:65,722,425...65,893,608
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,197,192...37,264,426
Ensembl chr 6:38,394,341...38,453,604
JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr14:27,434,904...28,274,969
Ensembl chr14:45,752,214...46,583,991
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO PMID:10892652 SynGO PMID:10892652 RGD:13702379 NCBI chr17:7,438,853...7,454,014 JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:20393464) SynGO PMID:20393464 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:17360903) SynGO PMID:17360903 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G NTNG2 netrin G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:103,281,915...103,362,786
Ensembl chr 9:131,917,760...131,998,107
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in ISO PMID:21262467 SynGO PMID:21262467 RGD:13702219 NCBI chr15:66,566,219...66,953,279
Ensembl chr15:85,776,832...86,157,204
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:65,081,844...65,087,135
Ensembl chr13:84,253,287...84,256,069
JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:134,853,269...134,865,281
Ensembl chr  X:145,235,542...145,238,079
JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:162,207,530...162,223,830
Ensembl chr 3:170,265,342...170,268,275
JBrowse link
G SNCA synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386
JBrowse link
regulation of presynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA2D3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 involved_in ISO (PMID:30683685) SynGO PMID:30683685 NCBI chr 3:54,061,565...55,012,985
Ensembl chr 3:55,282,935...56,233,723
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO PMID:10892652 SynGO PMID:10892652 RGD:13702379 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chr2A:76,830,224...77,616,298
Ensembl chr2A:79,123,161...79,183,506
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD4 chromodomain helicase DNA binding protein 4 involved_in ISO PMID:24991957 SynGO PMID:24991957 RGD:9587770 NCBI chr12:6,701,004...6,738,621
Ensembl chr12:6,619,089...6,656,076
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:17301182) MGI PMID:17301182 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361
JBrowse link
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:33101212) UniProt PMID:33101212 NCBI chr12:7,260,361...7,288,903
Ensembl chr12:7,175,951...7,204,526
JBrowse link
G CRTAC1 cartilage acidic protein 1 involved_in ISO (PMID:33658590) SynGO PMID:33658590 NCBI chr10:94,476,425...94,641,786
Ensembl chr10:97,973,565...98,138,558
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G ELAVL2 ELAV like RNA binding protein 2 involved_in ISO PMID:24991957 SynGO PMID:24991957 RGD:9587770 NCBI chr 9:23,543,090...23,703,634
Ensembl chr 9:24,155,627...24,230,254
JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118
JBrowse link
G EXOC7 exocyst complex component 7 involved_in ISO PMID:30374940 SynGO PMID:30374940 RGD:405650391 NCBI chr17:70,031,236...70,053,987
Ensembl chr17:75,584,270...75,606,461
JBrowse link
G GHSR growth hormone secretagogue receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17060947) Ensembl
MGI
PMID:17060947 GO_REF:0000107 NCBI chr 3:169,448,217...169,458,602
Ensembl chr 3:177,633,039...177,638,202
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:12657691) MGI PMID:12657691 NCBI chr 9:108,198,350...108,228,887
Ensembl chr 9:137,168,722...137,197,382
JBrowse link
G ICAM5 intercellular adhesion molecule 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:9,839,821...9,847,198
Ensembl chr19:10,504,037...10,511,716
JBrowse link
G L1CAM L1 cell adhesion molecule involved_in ISO (PMID:30846310) SynGO PMID:30846310 NCBI chr  X:143,412,303...143,437,090
Ensembl chr  X:153,298,690...153,324,228
JBrowse link
G LOC100994646 neuroligin-4, Y-linked involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:5,756,699...6,018,008 JBrowse link
G LRRTM4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (PMID:23911103) SynGO PMID:23911103 NCBI chr2A:76,830,224...77,616,298
Ensembl chr2A:79,123,161...79,183,506
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:18599438) Alzheimers_University_of_Toronto PMID:18599438 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:11827984 RGD:1599809 NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090
JBrowse link
G NEGR1 neuronal growth regulator 1 ISO RGD PMID:18602091 RGD:40886282 NCBI chr 1:70,628,093...71,503,114
Ensembl chr 1:72,613,516...73,484,240
JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:5,756,699...6,018,008 JBrowse link
G NRG2 neuregulin 2 involved_in ISO PMID:26674872 SynGO PMID:26674872 RGD:11070025 NCBI chr 5:135,212,496...135,411,469 JBrowse link
G NTN1 netrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:42,409,797...42,631,930
Ensembl chr17:47,152,225...47,368,134
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,798,219...60,840,948
Ensembl chr  X:70,852,687...70,894,921
JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 4:86,814,136...87,030,605
Ensembl chr 4:97,486,566...97,702,060
JBrowse link
G PODXL podocalyxin like involved_in ISO (PMID:20706633) SynGO PMID:20706633 NCBI chr 7:123,467,140...123,523,503
Ensembl chr 7:135,984,592...135,992,815
JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chr 7:86,863,919...87,251,634
Ensembl chr 7:100,455,357...100,833,220
JBrowse link
G RAB17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:124,802,789...124,820,775
Ensembl chr2B:243,654,176...243,671,003
JBrowse link
G RAP2A RAP2A, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:78,595,330...78,629,012
Ensembl chr13:97,751,799...97,785,194
JBrowse link
G RTN4R reticulon 4 receptor involved_in ISO (PMID:26838771) SynGO PMID:26838771 Ensembl chr22:18,673,548...18,680,017 JBrowse link
G SDC2 syndecan 2 involved_in ISO PMID:17548511 SynGO PMID:17548511 RGD:405650239 NCBI chr 8:93,118,379...93,230,803
Ensembl chr 8:95,314,910...95,428,519
JBrowse link
G SEMA4D semaphorin 4D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,451,420...60,588,519
Ensembl chr 9:88,497,528...88,560,811
JBrowse link
G SETD5 SET domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:9,350,026...9,430,760
Ensembl chr 3:9,592,517...9,672,306
JBrowse link
G SNAP25 synaptosome associated protein 25 ISO RGD PMID:15478103 RGD:1581079 NCBI chr20:10,164,236...10,252,856
Ensembl chr20:10,218,358...10,252,841
JBrowse link
G SRCIN1 SRC kinase signaling inhibitor 1 involved_in ISO (PMID:28641114) SynGO PMID:28641114 NCBI chr17:18,666,094...18,742,015
Ensembl chr17:18,942,084...19,015,744
JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,808,318...182,064,583
Ensembl chr 1:186,092,113...186,346,019
JBrowse link
G SRPX2 sushi repeat containing protein X-linked 2 involved_in ISO PMID:24179158 SynGO PMID:24179158 RGD:8553698 NCBI chr  X:89,854,389...89,886,776
Ensembl chr  X:99,994,560...100,021,241
JBrowse link
G VLDLR very low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:2,428,639...2,463,796
Ensembl chr 9:2,621,199...2,653,980
JBrowse link
regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRB3 adhesion G protein-coupled receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:66,484,739...67,238,607
Ensembl chr 6:69,788,604...70,536,820
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G C1QL2 complement C1q like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:6,097,758...6,102,622
Ensembl chr2B:119,679,840...119,686,120
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:17404223 SynGO PMID:17404223 RGD:13432239 NCBI chr 7:44,930,859...45,040,078
Ensembl chr 7:45,001,267...45,110,342
JBrowse link
G CLSTN1 calsyntenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,495,571...8,591,613
Ensembl chr 1:9,724,743...9,774,760
JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,618,294...14,635,193
Ensembl chr17:14,842,577...14,858,896
JBrowse link
G DAB1 DAB adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708
JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,180,513...207,594,684
Ensembl chr 1:212,265,520...212,612,079
JBrowse link
G DLGAP4 DLG associated protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,635,740...32,862,252
Ensembl chr20:33,881,703...33,980,454
JBrowse link
G FGF22 fibroblast growth factor 22 involved_in ISO (PMID:20505669), (PMID:27627962) SynGO PMID:20505669 PMID:27627962 NCBI chr19:494,172...499,003
Ensembl chr19:606,120...611,501
JBrowse link
G FGF7 fibroblast growth factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:28,378,339...28,442,800
Ensembl chr15:46,702,119...46,770,163
JBrowse link
G IGSF9 immunoglobulin superfamily member 9 involved_in ISO PMID:15340156 SynGO PMID:15340156 RGD:405650278 NCBI chr 1:135,278,902...135,297,887
Ensembl chr 1:139,199,466...139,218,482
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:35532105 SynGO PMID:35532105 RGD:405650385 NCBI chr 6:37,197,192...37,264,426
Ensembl chr 6:38,394,341...38,453,604
JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO PMID:35532105 SynGO PMID:35532105 RGD:405650385 NCBI chr14:27,434,904...28,274,969
Ensembl chr14:45,752,214...46,583,991
JBrowse link
G NEFL neurofilament light chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:24,218,510...24,224,627
Ensembl chr 8:21,134,533...21,140,694
JBrowse link
G NRG2 neuregulin 2 involved_in ISO PMID:26674872 SynGO PMID:26674872 RGD:11070025 NCBI chr 5:135,212,496...135,411,469 JBrowse link
G NRN1 neuritin 1 involved_in ISO (PMID:22190461) SynGO PMID:22190461 NCBI chr 6:5,832,603...5,841,975
Ensembl chr 6:6,014,000...6,022,870
JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:30826947) SynGO PMID:30826947 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
G SDC2 syndecan 2 involved_in ISO PMID:9971750 SynGO PMID:9971750 RGD:405650346 NCBI chr 8:93,118,379...93,230,803
Ensembl chr 8:95,314,910...95,428,519
JBrowse link
G SEMA7A semaphorin 7A (JohnMiltonHagen blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:53,351,662...53,376,327
Ensembl chr15:72,972,475...72,996,953
JBrowse link
G SNX27 sorting nexin 27 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,968,370...127,052,942
Ensembl chr 1:130,612,787...130,695,863
JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (PMID:26521016) SynGO PMID:26521016 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link
G YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta involved_in ISO (PMID:16959763) SynGO PMID:16959763 NCBI chr 8:97,560,251...97,595,117
Ensembl chr 8:99,730,393...99,762,990
JBrowse link
regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin involved_in ISO PMID:19524020 SynGO PMID:19524020 RGD:13702171 Ensembl chr 1:936,000...966,808 JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G ARF4 ARF GTPase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,504,701...57,530,545
Ensembl chr 3:58,710,897...58,736,816
JBrowse link
G C1QL3 complement C1q like 3 acts_upstream_of_or_within ISO (PMID:21262840) MGI PMID:21262840 NCBI chr10:16,829,350...16,839,614 JBrowse link
G CAMK1 calcium/calmodulin dependent protein kinase I involved_in ISO PMID:18184567 SynGO PMID:18184567 RGD:13702161 NCBI chr 3:9,708,782...9,721,433
Ensembl chr 3:9,945,609...9,959,560
JBrowse link
G CDH8 cadherin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:41,935,706...42,326,055
Ensembl chr16:61,054,214...61,437,569
JBrowse link
G CNTNAP4 contactin associated protein family member 4 involved_in ISO (PMID:24870235) SynGO PMID:24870235 NCBI chr16:56,512,541...57,138,499
Ensembl chr16:76,199,706...76,484,466
JBrowse link
G CTTNBP2 cortactin binding protein 2 involved_in ISO PMID:22262902 SynGO PMID:22262902 RGD:13702362 NCBI chr 7:109,675,275...109,837,178
Ensembl chr 7:122,370,616...122,520,397
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,396,180...49,464,689
Ensembl chr 3:50,640,615...50,703,852
JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:25318560) ParkinsonsUK-UCL PMID:25318560 NCBI chr10:48,950,704...48,953,815
Ensembl chr10:51,084,027...51,089,776
JBrowse link
G ETV5 ETS variant transcription factor 5 acts_upstream_of_or_within ISO (PMID:17785180) MGI PMID:17785180 NCBI chr 3:183,076,677...183,139,886
Ensembl chr 3:191,545,915...191,606,550
JBrowse link
G GPM6A glycoprotein M6A involved_in ISO PMID:27793698 SynGO PMID:27793698 RGD:13702167 NCBI chr 4:167,826,285...168,194,244
Ensembl chr 4:180,059,938...180,428,459
JBrowse link
G GPR158 G protein-coupled receptor 158 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:25,352,131...25,777,652
Ensembl chr10:25,722,127...26,140,997
JBrowse link
G IGSF9 immunoglobulin superfamily member 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24647940) Ensembl
MGI
PMID:24647940 GO_REF:0000107 NCBI chr 1:135,278,902...135,297,887
Ensembl chr 1:139,199,466...139,218,482
JBrowse link
G IL10 interleukin 10 ISO RGD PMID:24278397 RGD:11049480 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G IL10RA interleukin 10 receptor subunit alpha ISO RGD PMID:24278397 RGD:11049480 NCBI chr11:112,820,445...112,835,603
Ensembl chr11:116,752,619...116,767,771
JBrowse link
G KLK8 kallikrein related peptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:47,963,060...47,969,065
Ensembl chr19:56,852,838...56,858,549
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in ISO PMID:19442733 SynGO PMID:19442733 RGD:11069248 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO PMID:11827984 SynGO PMID:11827984 RGD:1599809 NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19345204) MGI
TreeGrafter
PMID:19345204 GO_REF:0000118 NCBI chr15:34,798,880...34,963,823
Ensembl chr15:53,118,411...53,283,076
JBrowse link
G PTPRO protein tyrosine phosphatase receptor type O involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,329,314...15,594,787
Ensembl chr12:15,725,917...15,990,532
JBrowse link
G PTPRT protein tyrosine phosphatase receptor type T involved_in ISO PMID:19816407 SynGO PMID:19816407 RGD:13702429 NCBI chr20:38,399,267...39,526,776
Ensembl chr20:39,502,794...40,317,701
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 involved_in ISO PMID:23303958 SynGO PMID:23303958 RGD:13702404 NCBI chr 1:39,886,961...39,958,519
Ensembl chr 1:41,239,798...41,278,282
JBrowse link
G RIMS4 regulating synaptic membrane exocytosis 4 involved_in ISO PMID:23303958 SynGO PMID:23303958 RGD:13702404 NCBI chr20:41,082,200...41,141,119
Ensembl chr20:42,180,764...42,234,847
JBrowse link
G SEPTIN11 septin 11 involved_in ISO PMID:19380581 SynGO PMID:19380581 RGD:13702154 NCBI chr 4:47,165,381...47,255,954
Ensembl chr 4:53,006,294...53,095,844
JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:25429150) MGI PMID:25429150 NCBI chr 4:130,529,677...130,601,396
Ensembl chr 4:141,849,343...141,959,849
JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in ISO PMID:27273464 SynGO PMID:27273464 RGD:13702200 NCBI chr13:65,081,844...65,087,135
Ensembl chr13:84,253,287...84,256,069
JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:134,853,269...134,865,281
Ensembl chr  X:145,235,542...145,238,079
JBrowse link
G SLITRK4 SLIT and NTRK like family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:132,750,454...132,763,782
Ensembl chr  X:143,138,515...143,141,028
JBrowse link
G SPARC secreted protein acidic and cysteine rich involved_in ISO PMID:21788491 SynGO PMID:21788491 RGD:13702385 NCBI chr 5:147,087,903...147,112,466
Ensembl chr 5:153,090,181...153,115,750
JBrowse link
G SPARCL1 SPARC like 1 involved_in ISO PMID:21788491 SynGO PMID:21788491 RGD:13702385 NCBI chr 4:79,769,085...79,825,430
Ensembl chr 4:90,498,810...90,521,665
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TUBB tubulin beta class I involved_in ISO (PMID:24833723) SynGO PMID:24833723 NCBI chr 6:30,465,367...30,470,451 JBrowse link
G VCP valosin containing protein involved_in ISO PMID:22105171 SynGO PMID:22105171 RGD:13702359 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRB3 adhesion G protein-coupled receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:66,484,739...67,238,607
Ensembl chr 6:69,788,604...70,536,820
JBrowse link
G C1QL1 complement C1q like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:12,354,791...12,363,101
Ensembl chr17:12,525,552...12,535,286
JBrowse link
G CD47 CD47 molecule involved_in ISO (PMID:30308165) SynGO PMID:30308165 NCBI chr 3:105,170,246...105,217,603
Ensembl chr 3:112,104,037...112,143,522
JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in ISO PMID:17143272 SynGO PMID:17143272 RGD:8554385 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499
JBrowse link
G EPHA4 EPH receptor A4 involved_in ISO PMID:17143272 SynGO PMID:17143272 RGD:8554385 NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790
JBrowse link
G ITGB1 integrin subunit beta 1 involved_in ISO (PMID:24831527) SynGO PMID:24831527 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031
JBrowse link
G NGEF neuronal guanine nucleotide exchange factor involved_in ISO (PMID:17143272) SynGO PMID:17143272 NCBI chr2B:120,110,441...120,153,934
Ensembl chr2B:239,027,286...239,155,874
JBrowse link
G PLXNC1 plexin C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:91,694,449...91,852,950
Ensembl chr12:95,093,332...95,251,249
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,370,206...28,403,440
Ensembl chr17:28,878,498...28,905,363
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (PMID:34407949) SynGO PMID:34407949 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNA2 catenin alpha 2 involved_in ISO (PMID:15034585) UniProt PMID:15034585 NCBI chr2A:79,594,694...80,745,885
Ensembl chr2A:81,303,559...82,307,258
JBrowse link
G DMPK DM1 protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,779,173...42,791,981
Ensembl chr19:51,316,099...51,329,355
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:22216301 RGD:6907446 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
JBrowse link
G LOC100977072 neuronal acetylcholine receptor subunit alpha-7 involved_in ISO (PMID:20164328) ARUK-UCL PMID:20164328 NCBI chr15:10,525,535...10,667,227
Ensembl chr15:29,565,885...29,705,194
JBrowse link
G NCAN neurocan acts_upstream_of_or_within ISO (PMID:11486035) MGI PMID:11486035 NCBI chr19:18,650,522...18,690,882
Ensembl chr19:19,657,766...19,691,998
JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chr 7:86,863,919...87,251,634
Ensembl chr 7:100,455,357...100,833,220
JBrowse link
regulation of synaptic activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin acts_upstream_of_or_within ISO (PMID:24753587) MGI PMID:24753587 Ensembl chr 1:936,000...966,808 JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:18599437), (PMID:18599438), (PMID:22496871) UniProt PMID:18599437 PMID:18599438 PMID:22496871 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G SYBU syntabulin ISO RGD PMID:19828815 RGD:13217418 NCBI chr 8:106,223,046...106,340,418
Ensembl chr 8:108,368,117...108,483,927
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:936,000...966,808 JBrowse link
G COLQ collagen like tail subunit of asymmetric acetylcholinesterase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20053883) Ensembl
MGI
PMID:20053883 GO_REF:0000107 NCBI chr 3:15,373,589...15,447,613
Ensembl chr 3:15,712,630...15,784,299
JBrowse link
G LOC100981746 homeobox protein SIX4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21884692) Ensembl
MGI
PMID:21884692 GO_REF:0000107 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G MUSK muscle associated receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:8653786) MGI PMID:8653786 NCBI chr 9:81,814,766...81,947,341
Ensembl chr 9:109,980,748...110,107,480
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:58,262,251...58,544,819
Ensembl chr13:77,306,509...77,586,843
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21884692) Ensembl
MGI
PMID:21884692 GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100983617 protocadherin-8 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr13:33,880,543...33,886,243
Ensembl chr13:52,688,522...52,692,399
JBrowse link
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chr19:32,852,993...32,863,240
Ensembl chr19:41,601,372...41,615,210
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:23751499 SynGO PMID:23751499 RGD:13702234 NCBI chr 7:69,943,704...71,395,176
Ensembl chr 7:83,758,512...84,760,872
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,197,192...37,264,426
Ensembl chr 6:38,394,341...38,453,604
JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr14:27,434,904...28,274,969
Ensembl chr14:45,752,214...46,583,991
JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 Ensembl chr16:30,347,229...30,366,743 JBrowse link
regulation of terminal button organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) CACAO PMID:21808020 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:22851330 RGD:13506174 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:22851330 RGD:13506174 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
G VPS35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19380
    biological regulation 11866
      regulation of biological quality 3149
        regulation of synapse structure or activity 409
          regulation of synapse organization + 403
          regulation of synaptic activity 3
paths to the root