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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synapse structure or activity
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Accession:GO:0050803 term browser browse the term
Definition:Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).
Synonyms:only_in_taxon: NCBITaxon:6072 ! Eumetazoa



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regulation of synapse structure or activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2136847 (PMID:10219973)
UniProt
RGD
PMID:10219973 GO_REF:0000024 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IMP RGD PMID:17005180 RGD:1600855 NCBI chr 8:54,552,978...54,580,375
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 involved_in TAS PMID:16246117 UniProt PMID:16246117 RGD:8554621 NCBI chr 8:1,562,118...2,035,035
Ensembl chr 8:1,562,119...2,034,979
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F IMP RGD PMID:15750591 RGD:1642736 NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
JBrowse link
G Slc17a6 solute carrier family 17 member 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
JBrowse link
G Slc17a7 solute carrier family 17 member 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Slc17a8 solute carrier family 17 member 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3511175 (PMID:15470153)
Ensembl
RGD
PMID:15470153 GO_REF:0000107 NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) RGD PMID:24328732 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Cfl1 cofilin 1 involved_in IMP
NAS
PMID:17360908 RGD
ARUK-UCL
PMID:23974706 PMID:17360908 RGD:11570553, RGD:12793018 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P04925|UniProtKB:Q01097 (PMID:22820466)
Ensembl
RGD
PMID:22820466 GO_REF:0000107 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO UniProtKB:P04925|UniProtKB:P39688 (PMID:22820466) RGD PMID:22820466 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Prnp prion protein involved_in ISO ComplexPortal:CPX-1134|UniProtKB:P39688|UniProtKB:Q01097 (PMID:22820466), (PMID:24012003) RGD PMID:22820466 PMID:24012003 NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937
JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm3 dynamin 3 IDA RGD PMID:17880892 RGD:8553820 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 IMP
IDA
RGD PMID:20531346 PMID:20531346 RGD:11251757, RGD:11251757 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661
JBrowse link
G Efna1 ephrin A1 involved_in ISS
ISO
GO_REF:0000024
(PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866
JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISS
ISO
GO_REF:0000024
(PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
IEA
ISS
UniProtKB:Q99K10 (PMID:23143522)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:23143522 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (PMID:21808020) RGD PMID:21808020 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:16675393) RGD PMID:16675393 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Twf1 twinfilin actin-binding protein 1 IMP RGD PMID:33963280 RGD:596938166 NCBI chr 7:125,715,938...125,727,834
Ensembl chr 7:125,716,015...125,727,894
JBrowse link
G Ube3a ubiquitin protein ligase E3A IMP RGD PMID:25867122 RGD:11079590 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:23769722 GO_REF:0000033, RGD:152975632 NCBI chr14:6,108,202...6,282,619
Ensembl chr14:6,108,211...6,282,563
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
(PMID:24467251)
UniProt
RGD
PMID:24467251 GO_REF:0000024 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptn pleiotrophin IDA RGD PMID:7722643 RGD:9834945 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 IMP RGD PMID:26169356 RGD:11074527 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24259049) RGD PMID:24259049 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30902970)
GO_REF:0000107
RGD
Ensembl
PMID:30902970 GO_REF:0000107 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:29643768) RGD PMID:29643768 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in IEA
ISO
GO_REF:0000107
(PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IDA RGD PMID:23358245 RGD:9743980 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Negr1 neuronal growth regulator 1 IDA RGD PMID:19711485 RGD:596948412 NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (PMID:15378065) RGD PMID:15378065 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:27893610 RGD:243048440 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Robo1 roundabout guidance receptor 1 IMP RGD PMID:27893610 RGD:243048440 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (PMID:22198949) RGD PMID:22198949 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(PMID:18986540)
Ensembl
RGD
PMID:18986540 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in ISO (PMID:21029865) RGD PMID:21029865 NCBI chr10:53,650,521...53,663,269
Ensembl chr10:53,650,553...53,663,913
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19900895)
UniProt
Ensembl
RGD
PMID:19900895 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO (PMID:23407945) RGD PMID:23407945 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgrmc1 progesterone receptor membrane component 1 involved_in IGI PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:115,832,865...115,841,060
Ensembl chr  X:115,832,884...115,888,682
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24328732)
Ensembl
RGD
PMID:24328732 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IMP RGD PMID:30206770 RGD:405650589 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in IGI PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Ins2 insulin 2 involved_in ISO ComplexPortal:CPX-1134 (PMID:19188609) RGD PMID:19188609 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 involved_in ISO (PMID:26683084) RGD PMID:26683084 NCBI chr17:23,289,793...23,468,026
Ensembl chr17:23,282,326...23,468,019
JBrowse link
G Zfp804a zinc finger protein 804A involved_in IMP PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chr 3:67,033,481...67,267,769
Ensembl chr 3:67,034,170...67,263,607
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
JBrowse link
positive regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 IMP RGD PMID:23441206 RGD:11530033 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
JBrowse link
G Actr3 actin related protein 3 IMP RGD PMID:23441206 RGD:11530033 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Afdn afadin, adherens junction formation factor IMP RGD PMID:22948147 RGD:13838731 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IMP RGD PMID:15673667 RGD:9684988 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta involved_in IMP PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
JBrowse link
G Caprin1 cell cycle associated protein 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20516077)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20516077 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
JBrowse link
G Caprin2 caprin family member 2 involved_in ISO (PMID:20516077) RGD PMID:20516077 NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IMP RGD PMID:18606847 RGD:11576294 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (PMID:20510857) RGD PMID:20510857 NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
JBrowse link
G Dbn1 drebrin 1 involved_in IMP
ISO
IBA
ISS
IEA
(PMID:25865831)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
UniProt
Ensembl
PMID:25865831 PMID:19174472 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:10398809 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dbnl drebrin-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IMP PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dnm1l dynamin 1-like IMP RGD PMID:19605646 RGD:7800727 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:175,393,119...175,456,756
Ensembl chr 1:175,393,154...175,455,164
JBrowse link
G Ephb2 Eph receptor B2 IMP RGD PMID:21364901 RGD:127285794 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Gprasp3 G protein-coupled receptor associated sorting protein family member 3 involved_in ISO (PMID:21199326) RGD PMID:21199326 NCBI chr  X:98,847,591...98,854,949
Ensembl chr  X:98,817,593...98,854,545
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within IMP PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4358076 (PMID:19625617)
Ensembl
RGD
PMID:19625617 GO_REF:0000107 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in ISO (PMID:21852430) RGD PMID:21852430 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate IMP RGD PMID:16202710 RGD:9685333 NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
JBrowse link
G Mfn1 mitofusin 1 IMP RGD PMID:19605646 RGD:7800727 NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:19605646 RGD:7800727 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IMP RGD PMID:19605646 RGD:7800727 NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (PMID:23483716) RGD PMID:23483716 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:18481281 RGD:7775053 NCBI chr  X:107,116,308...107,374,342
Ensembl chr  X:107,260,898...107,368,314
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(PMID:21664258), (PMID:21852430)
Ensembl
RGD
PMID:21664258 PMID:21852430 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Slc30a1 solute carrier family 30 member 1 IMP RGD PMID:25319628 RGD:11057402 NCBI chr13:103,491,037...103,494,910
Ensembl chr13:103,491,037...103,494,910
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 IMP RGD PMID:16474385 RGD:10043325 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (PMID:29981480) RGD PMID:29981480 NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:27683913)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:27683913 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:12,080,019...12,100,443
Ensembl chr 8:12,080,203...12,100,427
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) RGD PMID:21670302 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Sema4a semaphorin 4A involved_in ISO (PMID:29981480) RGD PMID:29981480 NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (PMID:23699507), (PMID:29981480) RGD PMID:23699507 PMID:29981480 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
JBrowse link
positive regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctn1 dynactin subunit 1 involved_in ISO
IEA
(PMID:18364389)
GO_REF:0000107
RGD
Ensembl
PMID:18364389 GO_REF:0000107 NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Slc18a3 solute carrier family 18 member A3 involved_in ISS
ISO
GO_REF:0000024
(PMID:19635813)
UniProt
RGD
PMID:19635813 GO_REF:0000024 NCBI chr16:7,713,630...7,716,491 JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 IMP RGD PMID:17626212 RGD:152995392 NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrxn1 neurexin 1 involved_in TAS PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
positive regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24259049) RGD PMID:24259049 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:22854782)
UniProt
RGD
PMID:22854782 GO_REF:0000024 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18430734 RGD:2306201 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 7:106,404,827...106,476,902
Ensembl chr 7:106,404,958...106,476,902
JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 5:142,299,190...142,362,540
Ensembl chr 5:142,331,329...142,362,540
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr19:24,397,972...24,418,648
Ensembl chr19:24,398,689...24,418,638
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr19:24,202,405...24,244,137
Ensembl chr19:24,204,360...24,244,139
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 2:237,696,055...238,327,141
Ensembl chr 2:237,696,056...238,327,141
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr14:26,336,320...27,104,060
Ensembl chr14:26,368,277...27,105,860
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA RGD PMID:15800376 RGD:2312779 NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:24613359)
GO_REF:0000033
RGD
GO_Central
PMID:24613359 GO_REF:0000033 NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:24613359)
Ensembl
GO_Central
RGD
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:24613359)
GO_REF:0000033
RGD
GO_Central
PMID:24613359 GO_REF:0000033 NCBI chr 8:108,741,899...108,743,425
Ensembl chr 8:108,693,060...108,744,555
JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180111 (PMID:19571134)
Ensembl
RGD
PMID:19571134 GO_REF:0000107 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within ISO MGI:1096391 (PMID:21356198) RGD PMID:21356198 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within ISO (PMID:21356198) RGD PMID:21356198 NCBI chr18:79,940,412...79,948,766
Ensembl chr18:79,942,590...79,947,855
JBrowse link
G Clstn1 calsyntenin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1929897|MGI:2178323 (PMID:24613359)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1929895|MGI:2178323 (PMID:24613359)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:98,020,406...98,637,232
Ensembl chr 8:98,021,666...98,637,731
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1929895|MGI:1929897 (PMID:24613359)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (PMID:20510857) RGD PMID:20510857 NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IMP RGD PMID:26738857 RGD:243048441 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (PMID:25232112) RGD PMID:25232112 NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:175,393,119...175,456,756
Ensembl chr 1:175,393,154...175,455,164
JBrowse link
G Efna5 ephrin A5 involved_in ISO (PMID:19036963) RGD PMID:19036963 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(PMID:14691139)
UniProt
RGD
PMID:14691139 GO_REF:0000024 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP
ISO
(PMID:14691139), (PMID:21029865) RGD PMID:14691139 PMID:21029865 PMID:21364901 RGD:127285794 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (PMID:14691139) RGD PMID:14691139 NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 1:204,275,785...204,292,844
Ensembl chr 1:204,275,367...204,353,750
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within ISO (PMID:16491079)
MGI:3045041 (PMID:16491079)
RGD PMID:16491079 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Gprasp3 G protein-coupled receptor associated sorting protein family member 3 involved_in ISO (PMID:21199326) RGD PMID:21199326 NCBI chr  X:98,847,591...98,854,949
Ensembl chr  X:98,817,593...98,854,545
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:27418511) RGD PMID:27418511 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:25908590)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25908590 GO_REF:0000024 GO_REF:0000107 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 IMP RGD PMID:26884337 RGD:11560558 NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 IMP RGD PMID:26884337 RGD:11560558 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 5:50,370,744...51,687,252
Ensembl chr 5:50,367,101...50,516,956
JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 2:182,035,522...182,040,787
Ensembl chr 2:182,014,326...182,040,787
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 7:108,437,296...108,444,561
Ensembl chr 7:108,437,296...108,444,438
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IBA
ISO
GO_REF:0000033
(PMID:21940441)
GO_Central
RGD
PMID:21940441 GO_REF:0000033 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 4:140,476,752...140,520,210
Ensembl chr 4:140,476,324...140,518,620
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 6:58,489,060...58,520,322
Ensembl chr 6:58,489,010...58,520,330
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr16:4,210,343...4,217,843 JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 4:152,485,863...152,508,248
Ensembl chr 4:152,485,866...152,500,377
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IEA
PMID:17582332
(PMID:21356198)
GO_REF:0000107
(PMID:24613359)
PMID:15797875
RGD
Ensembl
PMID:21356198 PMID:24613359 PMID:17582332 PMID:15797875 GO_REF:0000107, RGD:8553502, RGD:8554205 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
PMID:15797875
(PMID:21642956)
RGD PMID:21642956 PMID:15797875 RGD:8554205 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
TAS
GO_REF:0000024
MGI:88281|MGI:88282 (PMID:21356198)
GO_REF:0000107
PMID:15797875
BHF-UCL
RGD
Ensembl
PMID:21356198 PMID:15797875 GO_REF:0000024 GO_REF:0000107, RGD:8554205 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Opcml opioid binding protein/cell adhesion molecule-like IDA RGD PMID:19711485 RGD:596948412 NCBI chr 8:26,788,988...27,304,551
Ensembl chr 8:26,192,841...27,300,620
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:16488155 RGD:2304173 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:16488155 RGD:2304173 NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IDA PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18073185 RGD:2293299 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:25908590), (PMID:25989451) RGD PMID:25908590 PMID:25989451 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
G Slit2 slit guidance ligand 2 IMP RGD PMID:26738857 RGD:243048441 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:25989451)
(PMID:24613359)
GO_Central
RGD
PMID:24613359 PMID:25989451 GO_REF:0000033 NCBI chr  X:145,246,448...145,259,983
Ensembl chr  X:145,246,460...145,271,220
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:24613359)
GO_REF:0000033
RGD
GO_Central
PMID:24613359 GO_REF:0000033 NCBI chr  X:142,706,495...142,718,968
Ensembl chr  X:142,706,338...142,718,575
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO
IBA
IDA
(PMID:24179158)
GO_REF:0000033
RGD
GO_Central
PMID:24179158 PMID:24179158 GO_REF:0000033, RGD:8553698 NCBI chr  X:97,106,455...97,132,197
Ensembl chr  X:97,106,561...97,132,195
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IMP RGD PMID:16887122 RGD:27372880 NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO
IBA
IMP
(PMID:20152115)
GO_REF:0000033
RGD
GO_Central
PMID:20152115 PMID:20152115 GO_REF:0000033, RGD:8554654 NCBI chr 3:138,030,995...138,234,646
Ensembl chr 3:138,031,769...138,198,122
JBrowse link
G Thbs2 thrombospondin 2 IMP RGD PMID:15707899 RGD:1580068 NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 8:86,793,953...86,797,324
Ensembl chr 8:86,793,749...86,797,741
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:18986540)
(PMID:9405095)
RGD PMID:9405095 PMID:18986540 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
positive regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc2 anaphase promoting complex subunit 2 involved_in ISO (PMID:19900895) RGD PMID:19900895 NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta involved_in IMP PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
JBrowse link
G Cdc20 cell division cycle 20 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19900895)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19900895 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:131,966,203...131,970,406
Ensembl chr 5:131,966,215...131,970,512
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23326475)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23326475 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22153079) RGD PMID:22153079 NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:16504944)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16504944 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:19567877)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:19567877 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(PMID:17229826)
Ensembl
RGD
PMID:17229826 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:33097708) RGD PMID:33097708 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
positive regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk1 calcium/calmodulin-dependent protein kinase I involved_in ISO
IEA
ISS
(PMID:18184567)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18184567 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
JBrowse link
G Cdc42 cell division cycle 42 IMP RGD PMID:21423166 RGD:5688281 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Frmpd4 FERM and PDZ domain containing 4 involved_in ISO (PMID:19118189) RGD PMID:19118189 NCBI chr  X:25,853,849...26,814,642
Ensembl chr  X:25,853,934...26,814,637
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:21167025)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21167025 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISS
ISO
GO_REF:0000024
(PMID:10402191)
UniProt
RGD
PMID:10402191 GO_REF:0000024 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:14749715 RGD:2317108 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in IEA
ISO
GO_REF:0000107
(PMID:27307232)
Ensembl
RGD
PMID:27307232 GO_REF:0000107 NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
JBrowse link
G App amyloid beta precursor protein involved_in ISO ComplexPortal:CPX-1134 (PMID:23921129) RGD PMID:23921129 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Fcgr2b Fc gamma receptor 2B involved_in ISO UniProtKB:P05067-PRO_0000000092 (PMID:23921129) RGD PMID:23921129 NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Homer1 homer scaffold protein 1 involved_in IMP
ISS
PMID:19345194
GO_REF:0000024
UniProt PMID:19345194 GO_REF:0000024, RGD:8553291 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26618722) RGD PMID:26618722 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (PMID:15572692) RGD PMID:15572692 NCBI chr 9:61,827,186...61,905,703
Ensembl chr 9:61,827,139...61,905,699
JBrowse link
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 IMP RGD PMID:22328515 RGD:13703034 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein involved_in IGI PMID:15537891 ARUK-UCL PMID:15537891 RGD:13210528 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Arhgap33 Rho GTPase activating protein 33 IMP RGD PMID:24003235 RGD:13508596 NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678
JBrowse link
G Arhgap44 Rho GTPase activating protein 44 involved_in IBA
ISO
GO_REF:0000033
(PMID:24352656)
GO_Central
RGD
PMID:24352656 GO_REF:0000033 NCBI chr10:49,655,583...49,822,876
Ensembl chr10:49,655,584...49,824,297
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:17143272)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17143272 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cfl1 cofilin 1 involved_in ISO
ISS
(PMID:24464040)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:24464040 GO_REF:0000024 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Dnm3 dynamin 3 IMP RGD PMID:15741233 RGD:8554738 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Epha4 Eph receptor A4 involved_in ISS
ISO
GO_REF:0000024
(PMID:17143272)
UniProt
RGD
PMID:17143272 GO_REF:0000024 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Kif1a kinesin family member 1A involved_in IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO
ISS
(PMID:21168496)
UniProtKB:P23528 (PMID:24464040)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:21168496 PMID:24464040 GO_REF:0000024 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IMP
IBA
PMID:27252646
GO_REF:0000033
GO_Central PMID:27252646 GO_REF:0000033, RGD:13210540 NCBI chr 3:117,850,286...117,861,132
Ensembl chr 3:117,851,702...117,860,081
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:21808020)
BHF-UCL
RGD
PMID:21808020 PMID:21808020 GO_REF:0000024, RGD:8553412 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO (PMID:30021165) RGD PMID:30021165 NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:21795692)
Ensembl
RGD
PMID:21795692 PMID:21795692 GO_REF:0000107, RGD:7349315 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IDA PMID:11502259 UniProt PMID:11502259 RGD:8554032 NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in ISO
IBA
IEA
ISS
(PMID:19146815)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:19146815 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:82,502,911...82,569,882
Ensembl chr10:82,504,393...82,571,040
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IMP
IBA
PMID:30021165
GO_REF:0000033
GO_Central PMID:30021165 GO_REF:0000033, RGD:14995321 NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in IMP PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chr  X:69,568,086...69,701,756
Ensembl chr  X:69,574,124...69,701,756
JBrowse link
regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:32434929)
UniProt
RGD
PMID:32434929 GO_REF:0000024 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
regulation of excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk13 potassium two pore domain channel subfamily K member 13 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:34642249)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:34642249 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:119,240,825...119,345,292
Ensembl chr 6:119,242,188...119,345,240
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:29742426)
UniProt
RGD
PMID:29742426 GO_REF:0000024 NCBI chr 4:146,317,110...146,340,073
Ensembl chr 4:146,313,541...146,340,463
JBrowse link
regulation of modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amot angiomotin involved_in IDA
IMP
PMID:29317530 SynGO PMID:29317530 PMID:29317530 RGD:405650325, RGD:405650325 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 involved_in IMP
IDA
PMID:15673667 SynGO PMID:15673667 PMID:15673667 RGD:9684988, RGD:9684988 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Cap2 cyclase associated actin cytoskeleton regulatory protein 2 involved_in IMP
IDA
PMID:33094279 SynGO PMID:33094279 PMID:33094279 RGD:405650308, RGD:405650308 NCBI chr17:18,054,234...18,203,453
Ensembl chr17:18,054,431...18,203,373
JBrowse link
G Cttnbp2 cortactin binding protein 2 involved_in IMP
IDA
PMID:22262902 SynGO PMID:22262902 PMID:22262902 RGD:13702362, RGD:13702362 NCBI chr 4:46,800,975...46,964,681
Ensembl chr 4:46,800,981...46,964,631
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 involved_in ISO (PMID:24050404) RGD PMID:24050404 NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
JBrowse link
G Dip2a disco-interacting protein 2 homolog A involved_in ISO (PMID:31600191) RGD PMID:31600191 NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217
JBrowse link
G Itsn1 intersectin 1 involved_in IDA
IMP
PMID:19258322 SynGO PMID:19258322 PMID:19258322 RGD:13461864, RGD:13461864 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in IDA
IMP
PMID:18031682 SynGO PMID:18031682 PMID:18031682 RGD:12050112, RGD:12050112 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Limk1 LIM domain kinase 1 involved_in IDA
IMP
PMID:25884247 SynGO PMID:25884247 PMID:25884247 RGD:405650283, RGD:405650283 NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in IDA
IMP
PMID:16202710 SynGO PMID:16202710 PMID:16202710 RGD:9685333, RGD:9685333 NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
JBrowse link
G Myh10 myosin heavy chain 10 involved_in IDA
IMP
PMID:20797537 SynGO PMID:20797537 PMID:20797537 RGD:12050124, RGD:12050124 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Prmt8 protein arginine methyltransferase 8 involved_in ISO (PMID:32521269) RGD PMID:32521269 NCBI chr 4:160,535,813...160,618,193
Ensembl chr 4:160,535,813...160,617,930
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:19553453) RGD PMID:19553453 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA
(PMID:21423166)
GO_REF:0000107
RGD
Ensembl
PMID:21423166 GO_REF:0000107 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 involved_in IMP
IDA
PMID:15721239 SynGO PMID:15721239 PMID:15721239 RGD:12050147, RGD:12050147 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
JBrowse link
regulation of modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 involved_in IMP
IDA
PMID:27713690 SynGO PMID:27713690 PMID:27713690 RGD:405650302, RGD:405650302 NCBI chr 9:90,039,720...90,475,196
Ensembl chr 9:90,039,605...90,470,958
JBrowse link
G Ank3 ankyrin 3 involved_in IMP
IDA
PMID:25374361 SynGO PMID:25374361 PMID:25374361 RGD:405650220, RGD:405650220 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
JBrowse link
G Camkv CaM kinase-like vesicle-associated involved_in IEA
ISO
GO_REF:0000107
(PMID:27796283)
Ensembl
RGD
PMID:27796283 GO_REF:0000107 NCBI chr 8:108,626,821...108,641,169
Ensembl chr 8:108,626,821...108,641,169
JBrowse link
G Cd44 CD44 molecule involved_in EXP
IMP
IDA
PMID:27798233 SynGO PMID:27798233 PMID:27798233 PMID:27798233 RGD:405650378, RGD:405650378, RGD:405650378 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
JBrowse link
G Cdc42 cell division cycle 42 involved_in IMP
IDA
PMID:21423166 SynGO PMID:21423166 PMID:21423166 RGD:5688281, RGD:5688281 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in IMP
IDA
PMID:25698751 SynGO PMID:25698751 PMID:25698751 RGD:13702150, RGD:13702150 NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:26972007)
Ensembl
RGD
PMID:26972007 GO_REF:0000107 NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP
IDA
PMID:23864697 SynGO PMID:23864697 PMID:23864697 RGD:13702314, RGD:13702314 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Mrtfa myocardin related transcription factor A involved_in IMP
IDA
PMID:29335431 SynGO PMID:29335431 PMID:29335431 RGD:405650348, RGD:405650348 NCBI chr 7:112,544,305...112,714,418
Ensembl chr 7:112,544,312...112,714,418
JBrowse link
G Mrtfb myocardin related transcription factor B involved_in IMP
IDA
PMID:29335431 SynGO PMID:29335431 PMID:29335431 RGD:405650348, RGD:405650348 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897
JBrowse link
G Myo5b myosin Vb involved_in IDA
IMP
PMID:18984164 SynGO PMID:18984164 PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Nf1 neurofibromin 1 involved_in IDA
EXP
IMP
PMID:24431436 SynGO PMID:24431436 PMID:24431436 PMID:24431436 RGD:155230796, RGD:155230796, RGD:155230796 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Pdxp pyridoxal phosphatase involved_in ISO
IEA
(PMID:27212638)
GO_REF:0000107
RGD
Ensembl
PMID:27212638 GO_REF:0000107 NCBI chr 7:110,472,515...110,477,963
Ensembl chr 7:110,472,515...110,477,963
JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in IMP
IDA
PMID:32975518 SynGO PMID:32975518 PMID:32975518 RGD:405650326, RGD:405650326 NCBI chr17:21,560,364...22,040,166
Ensembl chr17:21,562,721...22,039,831
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:26490870) RGD PMID:26490870 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:21423166) RGD PMID:21423166 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rhob ras homolog family member B involved_in ISO (PMID:20203211) RGD PMID:20203211 NCBI chr 6:31,363,752...31,365,926
Ensembl chr 6:31,363,548...31,366,108
JBrowse link
G Strn striatin involved_in IMP
IDA
PMID:29802198 SynGO PMID:29802198 PMID:29802198 RGD:405650211, RGD:405650211 NCBI chr 6:16,335,265...16,422,159
Ensembl chr 6:16,335,358...16,417,083
JBrowse link
G Strn4 striatin 4 involved_in IDA
IMP
PMID:28442576 SynGO PMID:28442576 PMID:28442576 RGD:405650263, RGD:405650263 NCBI chr 1:77,482,267...77,511,862
Ensembl chr 1:77,482,094...77,511,858
JBrowse link
regulation of modification of synapse structure, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif5b kinesin family member 5B involved_in ISO
IEA
(PMID:31961321)
GO_REF:0000107
RGD
Ensembl
PMID:31961321 GO_REF:0000107 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508
JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 involved_in ISO
IEA
(PMID:24277827)
GO_REF:0000107
RGD
Ensembl
PMID:24277827 GO_REF:0000107 NCBI chr 7:46,369,963...46,433,691
Ensembl chr 7:46,369,988...46,433,764
JBrowse link
regulation of modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IGI
ISO
PMID:24658113
ComplexPortal:CPX-1134|UniProtKB:Q03137 (PMID:24658113)
RGD PMID:24658113 PMID:24658113 RGD:12911004 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:29780879) RGD PMID:29780879 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Epha4 Eph receptor A4 involved_in IGI
ISO
PMID:24658113
ComplexPortal:CPX-1134|UniProtKB:P00520 (PMID:24658113)
RGD PMID:24658113 PMID:24658113 RGD:12911004 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
regulation of postsynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:29969655) RGD PMID:29969655 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Arhgap12 Rho GTPase activating protein 12 involved_in IDA
IMP
PMID:26854232 SynGO PMID:26854232 PMID:26854232 RGD:11572714, RGD:11572714 NCBI chr17:51,588,810...51,702,417
Ensembl chr17:51,588,842...51,702,080
JBrowse link
G Arhgap33 Rho GTPase activating protein 33 involved_in ISO (PMID:24003235) RGD PMID:24003235 NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678
JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in ISO (PMID:28185854) RGD PMID:28185854 NCBI chr10:53,650,521...53,663,269
Ensembl chr10:53,650,553...53,663,913
JBrowse link
G Asic1 acid sensing ion channel subunit 1 involved_in ISO (PMID:17060608) RGD PMID:17060608 NCBI chr 7:130,798,317...130,828,535
Ensembl chr 7:130,799,917...130,828,541
JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in ISO
IEA
(PMID:19571134)
GO_REF:0000107
RGD
Ensembl
PMID:19571134 GO_REF:0000107 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Carmil3 capping protein regulator and myosin 1 linker 3 involved_in ISO
IEA
(PMID:30674877)
GO_REF:0000107
RGD
Ensembl
PMID:30674877 GO_REF:0000107 NCBI chr15:28,978,440...28,995,865
Ensembl chr15:28,979,007...28,996,225
JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A involved_in ISO
IEA
(PMID:26826102)
GO_REF:0000107
RGD
Ensembl
PMID:26826102 GO_REF:0000107 NCBI chr19:24,011,897...24,026,937
Ensembl chr19:24,011,938...24,026,936
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:22153079) RGD PMID:22153079 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Crmp1 collapsin response mediator protein 1 involved_in ISO (PMID:18003833) RGD PMID:18003833 NCBI chr14:73,509,933...73,556,192
Ensembl chr14:73,509,933...73,556,177
JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:28692454) RGD PMID:28692454 NCBI chr10:30,621,318...30,741,113
Ensembl chr10:30,621,318...30,741,113
JBrowse link
G Dclk1 doublecortin-like kinase 1 involved_in ISO
IEA
(PMID:23385585)
GO_REF:0000107
RGD
Ensembl
PMID:23385585 GO_REF:0000107 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
JBrowse link
G Dcx doublecortin involved_in ISO
IEA
(PMID:29788228)
GO_REF:0000107
RGD
Ensembl
PMID:29788228 GO_REF:0000107 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Dock1 dedicator of cyto-kinesis 1 involved_in ISO (PMID:21900250) RGD PMID:21900250 NCBI chr 1:189,467,143...189,983,777
Ensembl chr 1:189,467,143...189,983,768
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (PMID:25851601) RGD PMID:25851601 NCBI chr 9:81,843,599...82,101,540
Ensembl chr 9:81,843,604...82,101,525
JBrowse link
G Dock4 dedicator of cytokinesis 4 involved_in IMP
IDA
PMID:23536706 SynGO PMID:23536706 PMID:23536706 RGD:405650262, RGD:405650262 NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855
JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 involved_in IDA
IMP
PMID:29425794 SynGO PMID:29425794 PMID:29425794 RGD:405650303, RGD:405650303 NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
JBrowse link
G Elmo1 engulfment and cell motility 1 involved_in IMP
IDA
PMID:21900250 SynGO PMID:21900250 PMID:21900250 RGD:405650271, RGD:405650271 NCBI chr17:44,286,495...44,822,668
Ensembl chr17:44,286,485...44,822,788
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO (PMID:21969592) RGD PMID:21969592 NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in IDA
IMP
PMID:29983322 SynGO PMID:29983322 PMID:29983322 RGD:405650287, RGD:405650287 NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
JBrowse link
G Gna13 G protein subunit alpha 13 involved_in ISO (PMID:34665640) RGD PMID:34665640 NCBI chr10:94,337,939...94,370,774
Ensembl chr10:94,337,725...94,370,774
JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in ISO
IEA
(PMID:32060357)
GO_REF:0000107
RGD
Ensembl
PMID:32060357 GO_REF:0000107 NCBI chr18:55,765,981...55,949,921
Ensembl chr18:55,766,725...55,949,321
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in IMP
IDA
PMID:23441206 SynGO PMID:23441206 PMID:23441206 RGD:11530033, RGD:11530033 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:25407677) RGD PMID:25407677 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:26490870) RGD PMID:26490870 NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IDA
IMP
PMID:27252646 SynGO PMID:27252646 PMID:27252646 RGD:13210540, RGD:13210540 NCBI chr 3:117,850,286...117,861,132
Ensembl chr 3:117,851,702...117,860,081
JBrowse link
G Map1b microtubule-associated protein 1B involved_in ISO (PMID:21984824) RGD PMID:21984824 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
JBrowse link
G Mark1 microtubule affinity regulating kinase 1 involved_in ISO
IEA
(PMID:27829159)
GO_REF:0000107
RGD
Ensembl
PMID:27829159 GO_REF:0000107 NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173
JBrowse link
G Nae1 NEDD8 activating enzyme E1 subunit 1 involved_in ISO
IEA
(PMID:25581363)
GO_REF:0000107
RGD
Ensembl
PMID:25581363 GO_REF:0000107 NCBI chr19:446,015...472,145
Ensembl chr19:446,000...472,371
JBrowse link
G Nckipsd NCK interacting protein with SH3 domain involved_in IDA
IMP
PMID:23342115 SynGO PMID:23342115 PMID:23342115 RGD:405650384, RGD:405650384 NCBI chr 8:109,511,484...109,522,622
Ensembl chr 8:109,511,658...109,522,246
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in ISO (PMID:28872640) RGD PMID:28872640 NCBI chr11:54,362,712...54,469,351
Ensembl chr11:54,364,487...54,462,519
JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in ISO
IEA
(PMID:25581363)
GO_REF:0000107
RGD
Ensembl
PMID:25581363 GO_REF:0000107 NCBI chr15:29,153,556...29,165,575
Ensembl chr15:29,153,556...29,166,160
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22153079) RGD PMID:22153079 NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO
IEA
(PMID:36608123)
GO_REF:0000107
RGD
Ensembl
PMID:36608123 GO_REF:0000107 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IDA
IMP
PMID:16394100 SynGO PMID:16394100 PMID:16394100 RGD:2302413, RGD:2302413 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in IDA
IMP
PMID:16394100 SynGO PMID:16394100 PMID:16394100 RGD:2302413, RGD:2302413 NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
JBrowse link
G Palm paralemmin involved_in IMP
IDA
PMID:18287537 SynGO PMID:18287537 PMID:18287537 RGD:8553517, RGD:8553517 NCBI chr 7:9,886,634...9,912,389
Ensembl chr 7:9,886,643...9,912,555
JBrowse link
G Pcdh7 protocadherin 7 involved_in IDA
IMP
PMID:32616769 SynGO PMID:32616769 PMID:32616769 RGD:405650241, RGD:405650241 NCBI chr14:52,471,801...52,901,696
Ensembl chr14:52,475,610...52,902,051
Ensembl chr14:52,475,610...52,902,051
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA
IMP
PMID:19900557 SynGO PMID:19900557 PMID:19900557 RGD:8554803, RGD:8554803 NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B involved_in ISO (PMID:10922077) RGD PMID:10922077 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
G Psd pleckstrin and Sec7 domain containing involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 1:245,173,279...245,188,681
Ensembl chr 1:245,173,279...245,189,356
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 involved_in IMP
IDA
PMID:22844492 SynGO PMID:22844492 PMID:22844492 RGD:405650356, RGD:405650356 NCBI chr 3:156,638,811...156,687,503
Ensembl chr 3:156,638,769...156,687,504
JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in IMP
IDA
PMID:20133610 SynGO PMID:20133610 PMID:20133610 RGD:405650299, RGD:405650299 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:31369617) RGD PMID:31369617 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rac3 Rac family small GTPase 3 involved_in ISO (PMID:31369617) RGD PMID:31369617 NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260
JBrowse link
G Rhog ras homolog family member G involved_in ISO (PMID:21900250) RGD PMID:21900250 NCBI chr 1:156,618,713...156,630,710
Ensembl chr 1:156,615,349...156,631,257
JBrowse link
G Rtn4 reticulon 4 involved_in ISO
IEA
(PMID:26748478)
GO_REF:0000107
RGD
Ensembl
PMID:26748478 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26748478) RGD PMID:26748478 NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 involved_in ISO
IEA
(PMID:26748478)
GO_REF:0000107
RGD
Ensembl
PMID:26748478 GO_REF:0000107 NCBI chr 8:19,503,276...19,514,169
Ensembl chr 8:19,502,627...19,523,574
JBrowse link
G Samd4a sterile alpha motif domain containing 4A involved_in IDA
IEP
PMID:22201125 SynGO PMID:22201125 PMID:22201125 RGD:405650281, RGD:405650281 NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (PMID:31444474) RGD PMID:31444474 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in IDA
IMP
PMID:29425794 SynGO PMID:29425794 PMID:29425794 RGD:405650303, RGD:405650303 NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598
JBrowse link
G Sigmar1 sigma non-opioid intracellular receptor 1 involved_in IDA
IMP
PMID:20018732 SynGO PMID:20018732 PMID:20018732 RGD:405650297, RGD:405650297 NCBI chr 5:56,904,155...56,907,012
Ensembl chr 5:56,904,159...56,907,017
JBrowse link
G Slc12a5 solute carrier family 12 member 5 involved_in IMP
IDA
PMID:18093524 SynGO PMID:18093524 PMID:18093524 RGD:405650301, RGD:405650301 NCBI chr 3:153,696,517...153,735,801
Ensembl chr 3:153,696,517...153,735,765
JBrowse link
G Srgap3 SLIT-ROBO Rho GTPase activating protein 3 involved_in ISO (PMID:21325512) RGD PMID:21325512 NCBI chr 4:145,839,369...146,070,556
Ensembl chr 4:145,840,078...146,070,575
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IDA
IMP
EXP
PMID:20152115 SynGO PMID:20152115 PMID:20152115 PMID:20152115 RGD:8554654, RGD:8554654, RGD:8554654 NCBI chr 3:138,030,995...138,234,646
Ensembl chr 3:138,031,769...138,198,122
JBrowse link
G Trim47 tripartite motif-containing 47 involved_in IDA
IMP
PMID:36211980 SynGO PMID:36211980 PMID:36211980 RGD:405650257, RGD:405650257 NCBI chr10:101,337,573...101,342,044
Ensembl chr10:101,337,573...101,342,044
JBrowse link
G Ube2m ubiquitin-conjugating enzyme E2M involved_in ISO (PMID:25581363) RGD PMID:25581363 NCBI chr 1:73,662,576...73,666,113
Ensembl chr 1:73,662,576...73,666,026
JBrowse link
G Ube3b ubiquitin protein ligase E3B involved_in ISO (PMID:32249816) RGD PMID:32249816 NCBI chr12:42,183,756...42,230,094
Ensembl chr12:42,183,760...42,230,094
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:31813652) RGD PMID:31813652 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26521016) RGD PMID:26521016 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:18836441) RGD PMID:18836441 NCBI chr11:82,755,110...82,769,280
Ensembl chr11:82,755,143...82,767,734
JBrowse link
regulation of postsynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase involved_in IDA
IBA
IEP
IMP
PMID:27307232
GO_REF:0000033
GO_Central PMID:27307232 PMID:27307232 PMID:27307232 GO_REF:0000033, RGD:13441201, RGD:13441201, RGD:13441201 NCBI chr 7:9,124,332...9,132,762
Ensembl chr 7:9,124,332...9,130,762
JBrowse link
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in IDA
IBA
IEP
IMP
PMID:27307232
GO_REF:0000033
GO_Central PMID:27307232 PMID:27307232 PMID:27307232 GO_REF:0000033, RGD:13441201, RGD:13441201, RGD:13441201 NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
JBrowse link
G Abhd17c abhydrolase domain containing 17C, depalmitoylase involved_in IMP
IBA
IEP
IDA
PMID:27307232
GO_REF:0000033
GO_Central PMID:27307232 PMID:27307232 PMID:27307232 GO_REF:0000033, RGD:13441201, RGD:13441201, RGD:13441201 NCBI chr 1:138,084,632...138,125,595
Ensembl chr 1:138,084,634...138,125,595
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 involved_in IEA
ISO
GO_REF:0000107
(PMID:23083742)
Ensembl
RGD
PMID:23083742 GO_REF:0000107 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:26844834)
Ensembl
RGD
PMID:26844834 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Arf4 ARF GTPase 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:23050017)
Ensembl
RGD
PMID:23050017 GO_REF:0000107 NCBI chr16:1,896,692...1,913,267
Ensembl chr16:1,896,546...1,913,261
JBrowse link
G Arhgap22 Rho GTPase activating protein 22 involved_in ISO
IBA
(PMID:21926414)
GO_REF:0000033
RGD
GO_Central
PMID:21926414 GO_REF:0000033 NCBI chr16:8,473,806...8,631,552
Ensembl chr16:8,476,306...8,631,548
JBrowse link
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:23050017)
Ensembl
RGD
PMID:23050017 GO_REF:0000107 NCBI chr 7:95,786,130...96,093,111
Ensembl chr 7:95,787,818...96,092,754
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 involved_in IDA
IMP
PMID:15673667 SynGO PMID:15673667 PMID:15673667 RGD:9684988, RGD:9684988 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:25851601) RGD PMID:25851601 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cdkl5 cyclin-dependent kinase-like 5 involved_in ISO (PMID:22922712) RGD PMID:22922712 NCBI chr  X:33,757,605...33,988,075
Ensembl chr  X:33,821,257...33,986,582
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in IMP
IDA
PMID:25698751 SynGO PMID:25698751 PMID:25698751 RGD:13702150, RGD:13702150 NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
JBrowse link
G Chmp4bl1 chromatin modifying protein 4B-like 1 involved_in IDA
IMP
PMID:25698751 SynGO PMID:25698751 PMID:25698751 RGD:13702150, RGD:13702150 NCBI chr 4:68,049,742...68,050,791
Ensembl chr 4:68,049,705...68,050,676
JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 involved_in ISO (PMID:20335472), (PMID:23826333) RGD PMID:20335472 PMID:23826333 NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906
JBrowse link
G Dgkb diacylglycerol kinase, beta involved_in IEA
ISO
GO_REF:0000107
(PMID:20657643)
Ensembl
RGD
PMID:20657643 GO_REF:0000107 NCBI chr 6:54,640,948...55,397,210
Ensembl chr 6:54,641,614...55,397,043
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (PMID:23826333) RGD PMID:23826333 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:23826333) RGD PMID:23826333 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Epha7 Eph receptor A7 involved_in IEA
ISO
GO_REF:0000107
(PMID:24707048)
Ensembl
RGD
PMID:24707048 GO_REF:0000107 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IMP
IDA
PMID:22516464 SynGO PMID:22516464 PMID:22516464 RGD:13702295, RGD:13702295 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in IDA
EXP
PMID:22516464 SynGO PMID:22516464 PMID:22516464 RGD:13702295, RGD:13702295 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Grid1 glutamate ionotropic receptor delta type subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25721396)
Ensembl
RGD
PMID:25721396 GO_REF:0000107 NCBI chr16:10,138,564...10,885,803
Ensembl chr16:10,138,925...10,885,808
JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IDA
IMP
PMID:24990929 SynGO PMID:24990929 PMID:24990929 RGD:10002784, RGD:10002784 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M involved_in IDA
IMP
PMID:22238095 SynGO PMID:22238095 PMID:22238095 RGD:155230714, RGD:155230714 NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:28234934)
Ensembl
RGD
PMID:28234934 GO_REF:0000107 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO
IEA
(PMID:21926414)
GO_REF:0000107
RGD
Ensembl
PMID:21926414 GO_REF:0000107 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Itsn1 intersectin 1 involved_in IDA
IMP
PMID:19258322 SynGO PMID:19258322 PMID:19258322 RGD:13461864, RGD:13461864 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G Lrfn2 leucine rich repeat and fibronectin type III domain containing 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:28604739)
Ensembl
RGD
PMID:28604739 GO_REF:0000107 NCBI chr 9:11,897,425...12,066,177
Ensembl chr 9:11,897,468...11,939,931
JBrowse link
G Mark2 microtubule affinity regulating kinase 2 involved_in IDA
IMP
PMID:22807451 SynGO PMID:22807451 PMID:22807451 RGD:155230723, RGD:155230723 NCBI chr 1:204,461,029...204,526,247
Ensembl chr 1:204,461,030...204,525,652
JBrowse link
G Mink1 misshapen-like kinase 1 involved_in IEP
IMP
IDA
PMID:21048137 SynGO PMID:21048137 PMID:21048137 PMID:21048137 RGD:8553980, RGD:8553980, RGD:8553980 NCBI chr10:55,278,293...55,330,782
Ensembl chr10:55,278,391...55,330,782
JBrowse link
G Ncan neurocan involved_in ISO (PMID:30356641) RGD PMID:30356641 NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
JBrowse link
G Nf1 neurofibromin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:22105171)
Ensembl
RGD
PMID:22105171 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA
ISO
GO_REF:0000107
(PMID:25143608)
Ensembl
RGD
PMID:25143608 GO_REF:0000107 NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20010807)
Ensembl
RGD
PMID:20010807 GO_REF:0000107 NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (PMID:23483716) RGD PMID:23483716 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:25851601)
Ensembl
RGD
PMID:25851601 GO_REF:0000107 NCBI chr  X:107,116,308...107,374,342
Ensembl chr  X:107,260,898...107,368,314
JBrowse link
G Plppr4 phospholipid phosphatase related 4 involved_in ISO
IEA
(PMID:27453502)
GO_REF:0000107
RGD
Ensembl
PMID:27453502 GO_REF:0000107 NCBI chr 2:205,371,317...205,412,302
Ensembl chr 2:205,371,322...205,412,302
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:23083742) RGD PMID:23083742 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 involved_in ISO (PMID:23083742) RGD PMID:23083742 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F involved_in IDA
IMP
PMID:15750591 SynGO PMID:15750591 PMID:15750591 RGD:1642736, RGD:1642736 NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in IDA
IMP
PMID:19734897 SynGO PMID:19734897 PMID:19734897 RGD:2314692, RGD:2314692 NCBI chr 3:56,809,388...57,101,332
Ensembl chr 3:56,809,270...57,102,316
JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in IDA
IMP
PMID:22238095 SynGO PMID:22238095 PMID:22238095 RGD:155230714, RGD:155230714 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743
JBrowse link
G Rheb Ras homolog, mTORC1 binding involved_in IDA
IMP
PMID:24889507 SynGO PMID:24889507 PMID:24889507 RGD:13702223, RGD:13702223 NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 involved_in IDA
IMP
PMID:26003414 SynGO PMID:26003414 PMID:26003414 RGD:11344299, RGD:11344299 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
JBrowse link
G Rps6ka5 ribosomal protein S6 kinase A5 involved_in ISO (PMID:23077336) RGD PMID:23077336 NCBI chr 6:119,828,823...120,006,190
Ensembl chr 6:119,828,846...120,006,224
JBrowse link
G Sema3f semaphorin 3F involved_in ISO (PMID:20010807), (PMID:25143608) RGD PMID:20010807 PMID:25143608 NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in IMP
IDA
PMID:21217644 SynGO PMID:21217644 PMID:21217644 RGD:13702145, RGD:13702145 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP
IDA
PMID:21217644 SynGO PMID:21217644 PMID:21217644 RGD:13702145, RGD:13702145 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in IMP
IBA
IDA
PMID:21068316
GO_REF:0000033
GO_Central PMID:21068316 PMID:21068316 GO_REF:0000033, RGD:11353167, RGD:11353167 NCBI chr 3:44,099,387...44,335,478
Ensembl chr 3:44,134,016...44,331,627
JBrowse link
G Taok2 TAO kinase 2 involved_in IMP
IDA
PMID:28065648 SynGO PMID:28065648 PMID:28065648 RGD:155230793, RGD:155230793 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 involved_in IMP
IDA
PMID:15721239 SynGO PMID:15721239 PMID:15721239 RGD:12050147, RGD:12050147 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in IMP
IDA
PMID:24889507 SynGO PMID:24889507 PMID:24889507 RGD:13702223, RGD:13702223 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Tsc2_v1 TSC complex subunit 2, variant 1 involved_in IMP
IDA
PMID:24889507 SynGO PMID:24889507 PMID:24889507 RGD:13702223, RGD:13702223
G Tsc2_v2 TSC complex subunit 2, variant 2 involved_in IMP
IDA
PMID:24889507 SynGO PMID:24889507 PMID:24889507 RGD:13702223, RGD:13702223
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:26972007) RGD PMID:26972007 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in IEA
ISO
GO_REF:0000107
(PMID:25851601)
Ensembl
RGD
PMID:25851601 GO_REF:0000107 NCBI chr 4:53,083,536...53,132,061
Ensembl chr 4:53,083,536...53,132,022
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(PMID:27402827)
GO_REF:0000107
RGD
Ensembl
PMID:27402827 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) RGD PMID:21670302 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
JBrowse link
G Caskin1 CASK interacting protein 1 involved_in ISO
IEA
(PMID:31727973)
GO_REF:0000107
RGD
Ensembl
PMID:31727973 GO_REF:0000107 NCBI chr10:13,512,684...13,533,380
Ensembl chr10:13,513,465...13,533,377
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (PMID:20395510) RGD PMID:20395510 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP
IDA
PMID:10570482 SynGO PMID:10570482 PMID:10570482 RGD:8554363, RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (PMID:32324534) RGD PMID:32324534 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:20395510) RGD PMID:20395510 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IMP
IDA
EXP
PMID:29317530 SynGO PMID:29317530 PMID:29317530 PMID:29317530 RGD:405650325, RGD:405650325, RGD:405650325 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA
PMID:16630835 SynGO PMID:16630835 PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:83,742,442...83,761,450
Ensembl chr 1:83,682,964...83,761,449
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
GO_REF:0000033
(PMID:20410109)
GO_Central
RGD
PMID:20410109 GO_REF:0000033 NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
IEA
(PMID:32324534)
GO_REF:0000107
RGD
Ensembl
PMID:32324534 GO_REF:0000107 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21410790)
Ensembl
RGD
PMID:21410790 GO_REF:0000107 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA
(PMID:34613779)
GO_REF:0000107
RGD
Ensembl
PMID:34613779 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) RGD PMID:23711981 PMID:34613779 NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:28555636) RGD PMID:28555636 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in EXP
ISO
IDA
PMID:29024665
(PMID:22357843)
RGD PMID:22357843 PMID:29024665 PMID:29024665 RGD:13702141, RGD:13702141 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
ISO
IEA
IMP
EXP
PMID:21262467
(PMID:21262467)
GO_REF:0000107
RGD
Ensembl
PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 GO_REF:0000107, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:11502259 SynGO PMID:11502259 PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
JBrowse link
regulation of postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399
JBrowse link
G Dbn1 drebrin 1 IMP RGD PMID:12878700 RGD:10398728 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Slc30a1 solute carrier family 30 member 1 IMP RGD PMID:25319628 RGD:11057402 NCBI chr13:103,491,037...103,494,910
Ensembl chr13:103,491,037...103,494,910
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:19726636) RGD PMID:19726636 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Arf6 ARF GTPase 6 involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (PMID:20395510), (PMID:21410790) RGD PMID:20395510 PMID:21410790 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Clstn3 calsyntenin 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303 PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:98,124,304...98,363,299
Ensembl chr15:98,182,329...98,363,299
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19883499)
Ensembl
RGD
PMID:19883499 GO_REF:0000107 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643
JBrowse link
G Gpc4 glypican 4 involved_in IDA
IBA
IMP
PMID:23911103
GO_REF:0000033
GO_Central PMID:23911103 PMID:23911103 GO_REF:0000033, RGD:13702303, RGD:13702303 NCBI chr  X:131,644,711...131,755,349
Ensembl chr  X:131,644,704...131,755,284
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IDA
IMP
PMID:21410790
PMID:20395510
SynGO PMID:21410790 PMID:21410790 PMID:20395510 PMID:20395510 RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Igsf11 immunoglobulin superfamily, member 11 involved_in ISO (PMID:34261648) RGD PMID:34261648 NCBI chr11:61,733,139...61,884,059
Ensembl chr11:61,733,144...61,868,348
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21926414)
Ensembl
RGD
PMID:21926414 GO_REF:0000107 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr  X:100,961,509...102,271,753
Ensembl chr  X:100,961,812...102,271,753
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IMP
IDA
PMID:27480238 SynGO PMID:27480238 PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:85,616,862...85,623,725
Ensembl chr 1:85,616,868...85,623,725
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
GO_REF:0000033
(PMID:20410109)
GO_Central
RGD
PMID:20410109 GO_REF:0000033 NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA
ISO
GO_REF:0000033
(PMID:20410109)
GO_Central
RGD
PMID:20410109 GO_REF:0000033 NCBI chr 6:79,466,403...79,822,821
Ensembl chr 6:79,467,961...79,822,815
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IDA
IBA
IMP
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 involved_in ISO (PMID:26776509) RGD PMID:26776509 NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) RGD PMID:27608760 NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
JBrowse link
G Nlgn2 neuroligin 2 involved_in IMP
IDA
PMID:10892652 SynGO PMID:10892652 PMID:10892652 RGD:13702379, RGD:13702379 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:20393464) RGD PMID:20393464 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:17360903)
Ensembl
RGD
PMID:17360903 GO_REF:0000107 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ntng2 netrin G2 involved_in ISO (PMID:16980967) RGD PMID:16980967 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
IMP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:145,246,448...145,259,983
Ensembl chr  X:145,246,460...145,271,220
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436)
(PMID:22286174)
RGD PMID:22286174 PMID:23345436 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
G Snca synuclein alpha involved_in ISO
IEA
UniProtKB:Q21053 (PMID:25533483)
GO_REF:0000107
RGD
Ensembl
PMID:25533483 GO_REF:0000107 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:19883499) RGD PMID:19883499 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:20530549) RGD PMID:20530549 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
regulation of presynapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna2d3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 involved_in ISO
IEA
(PMID:30683685)
GO_REF:0000107
RGD
Ensembl
PMID:30683685 GO_REF:0000107 NCBI chr16:4,098,439...4,912,498
Ensembl chr16:4,098,445...4,912,351
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
IMP
EXP
PMID:10892652 SynGO PMID:10892652 PMID:10892652 PMID:10892652 RGD:13702379, RGD:13702379, RGD:13702379 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
regulation of presynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) RGD PMID:23911104 NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd4 chromodomain helicase DNA binding protein 4 involved_in IDA
IMP
PMID:24991957 SynGO PMID:24991957 PMID:24991957 RGD:9587770, RGD:9587770 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (PMID:17301182) RGD PMID:17301182 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (PMID:33101212) RGD PMID:33101212 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Crtac1 cartilage acidic protein 1 involved_in ISO (PMID:33658590) RGD PMID:33658590 NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:28641114)
Ensembl
RGD
PMID:28641114 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Elavl2 ELAV like RNA binding protein 2 involved_in IMP
IDA
PMID:24991957 SynGO PMID:24991957 PMID:24991957 RGD:9587770, RGD:9587770 NCBI chr 5:105,960,872...106,086,463
Ensembl chr 5:105,960,875...106,109,097
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (PMID:17122040) RGD PMID:17122040 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Exoc7 exocyst complex component 7 involved_in IDA
IMP
PMID:30374940 SynGO PMID:30374940 PMID:30374940 RGD:405650391, RGD:405650391 NCBI chr10:101,521,630...101,540,425
Ensembl chr10:101,520,927...101,540,561
JBrowse link
G Ghsr growth hormone secretagogue receptor acts_upstream_of_or_within ISO MGI:3040440 (PMID:17060947) RGD PMID:17060947 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:2655232|MGI:2655237 (PMID:12657691) RGD PMID:12657691 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Icam5 intercellular adhesion molecule 5 involved_in ISO (PMID:23015592) RGD PMID:23015592 NCBI chr 8:19,567,390...19,575,588
Ensembl chr 8:19,568,600...19,575,588
JBrowse link
G L1cam L1 cell adhesion molecule involved_in ISO (PMID:30846310) RGD PMID:30846310 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (PMID:23911103) RGD PMID:23911103 NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:18599438) RGD PMID:18599438 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:11827984 RGD:1599809 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
JBrowse link
G Negr1 neuronal growth regulator 1 IMP RGD PMID:18602091 RGD:40886282 NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872 PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:27,616,542...27,798,505
Ensembl chr18:27,619,661...27,798,505
JBrowse link
G Ntn1 netrin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:24174661)
Ensembl
RGD
PMID:24174661 GO_REF:0000107 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
GO_REF:0000107
(PMID:28143929)
Ensembl
RGD
PMID:28143929 GO_REF:0000107 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
JBrowse link
G Podxl podocalyxin-like involved_in ISO (PMID:20706633) RGD PMID:20706633 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (PMID:22291024) RGD PMID:22291024 NCBI chr 9:91,552,924...91,566,759
Ensembl chr 9:91,553,464...91,566,451
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family involved_in ISO (PMID:30063210) RGD PMID:30063210 NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26838771) RGD PMID:26838771 NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G Sdc2 syndecan 2 involved_in IDA
IMP
PMID:17548511 SynGO PMID:17548511 PMID:17548511 RGD:405650239, RGD:405650239 NCBI chr 7:64,127,185...64,239,885
Ensembl chr 7:64,127,110...64,241,081
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (PMID:24036351) RGD PMID:24036351 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
JBrowse link
G Setd5 SET domain containing 5 involved_in ISO (PMID:31515109) RGD PMID:31515109 NCBI chr 4:146,217,172...146,294,896
Ensembl chr 4:146,217,180...146,294,894
JBrowse link
G Snap25 synaptosome associated protein 25 IEP RGD PMID:15478103 RGD:1581079 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in ISO (PMID:28641114) RGD PMID:28641114 NCBI chr10:82,502,911...82,569,882
Ensembl chr10:82,504,393...82,571,040
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:22559944) RGD PMID:22559944 NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in IDA
IMP
PMID:24179158 SynGO PMID:24179158 PMID:24179158 RGD:8553698, RGD:8553698 NCBI chr  X:97,106,455...97,132,197
Ensembl chr  X:97,106,561...97,132,195
JBrowse link
G Vldlr very low density lipoprotein receptor involved_in ISO
IEA
(PMID:25644714)
GO_REF:0000107
RGD
Ensembl
PMID:25644714 GO_REF:0000107 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
JBrowse link
regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in ISO (PMID:25611509) RGD PMID:25611509 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
IEA
(PMID:29735530)
GO_REF:0000107
RGD
Ensembl
PMID:29735530 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G C1ql2 complement C1q like 2 involved_in ISO (PMID:25611509) RGD PMID:25611509 NCBI chr13:31,471,150...31,472,685
Ensembl chr13:31,471,150...31,472,689
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta involved_in IDA
IEP
IMP
PMID:17404223 SynGO PMID:17404223 PMID:17404223 PMID:17404223 RGD:13432239, RGD:13432239, RGD:13432239 NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
JBrowse link
G Clstn1 calsyntenin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:24966372)
Ensembl
RGD
PMID:24966372 GO_REF:0000107 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISO (PMID:33148880) RGD PMID:33148880 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611
JBrowse link
G Dab1 DAB adaptor protein 1 involved_in ISO
IEA
(PMID:27624722)
GO_REF:0000107
RGD
Ensembl
PMID:27624722 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (PMID:17825401) RGD PMID:17825401 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dlgap4 DLG associated protein 4 involved_in ISO
IEA
(PMID:30664629)
GO_REF:0000107
RGD
Ensembl
PMID:30664629 GO_REF:0000107 NCBI chr 3:145,124,189...145,271,791
Ensembl chr 3:145,175,479...145,270,490
JBrowse link
G Fgf22 fibroblast growth factor 22 involved_in ISO (PMID:20505669), (PMID:27627962) RGD PMID:20505669 PMID:27627962 NCBI chr 7:9,947,632...9,956,918
Ensembl chr 7:9,948,071...9,950,486
JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in ISO
IEA
(PMID:20505669)
GO_REF:0000107
RGD
Ensembl
PMID:20505669 GO_REF:0000107 NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929
JBrowse link
G Igsf9 immunoglobulin superfamily, member 9 involved_in IMP
IDA
PMID:15340156 SynGO PMID:15340156 PMID:15340156 RGD:405650278, RGD:405650278 NCBI chr13:84,948,643...84,965,616
Ensembl chr13:84,948,619...84,965,607
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IDA
IMP
PMID:35532105 SynGO PMID:35532105 PMID:35532105 RGD:405650385, RGD:405650385 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in IDA
IMP
PMID:35532105 SynGO PMID:35532105 PMID:35532105 RGD:405650385, RGD:405650385 NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
JBrowse link
G Nefl neurofilament light chain involved_in ISO (PMID:25232125) RGD PMID:25232125 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872 PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:27,616,542...27,798,505
Ensembl chr18:27,619,661...27,798,505
JBrowse link
G Nrn1 neuritin 1 involved_in ISO (PMID:22190461) RGD PMID:22190461 NCBI chr17:28,129,969...28,138,898
Ensembl chr17:28,129,977...28,138,896
JBrowse link
G Reln reelin involved_in ISO (PMID:27624722) RGD PMID:27624722 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:30826947)
Ensembl
RGD
PMID:30826947 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:30826947) RGD PMID:30826947 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Sdc2 syndecan 2 involved_in IMP
IDA
PMID:9971750 SynGO PMID:9971750 PMID:9971750 RGD:405650346, RGD:405650346 NCBI chr 7:64,127,185...64,239,885
Ensembl chr 7:64,127,110...64,241,081
JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) involved_in ISO (PMID:25201975) RGD PMID:25201975 NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
JBrowse link
G Snx27 sorting nexin 27 involved_in ISO
IEA
(PMID:33330482)
GO_REF:0000107
RGD
Ensembl
PMID:33330482 GO_REF:0000107 NCBI chr 2:182,135,904...182,218,906
Ensembl chr 2:182,135,905...182,218,906
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26521016) RGD PMID:26521016 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta involved_in ISO
IEA
(PMID:16959763)
GO_REF:0000107
RGD
Ensembl
PMID:16959763 GO_REF:0000107 NCBI chr 7:67,941,353...67,963,651
Ensembl chr 7:67,940,017...67,963,668
JBrowse link
regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in IDA
IMP
PMID:19524020 SynGO PMID:19524020 PMID:19524020 RGD:13702171, RGD:13702171 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:27683909) RGD PMID:27683909 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Arf4 ARF GTPase 4 involved_in ISO (PMID:23050017) RGD PMID:23050017 NCBI chr16:1,896,692...1,913,267
Ensembl chr16:1,896,546...1,913,261
JBrowse link
G C1ql3 complement C1q like 3 acts_upstream_of_or_within ISO (PMID:21262840) RGD PMID:21262840 NCBI chr17:76,119,344...76,129,170
Ensembl chr17:76,119,447...76,128,530
JBrowse link
G Camk1 calcium/calmodulin-dependent protein kinase I involved_in IDA
IBA
IEP
IMP
PMID:18184567
GO_REF:0000033
GO_Central PMID:18184567 PMID:18184567 PMID:18184567 GO_REF:0000033, RGD:13702161, RGD:13702161, RGD:13702161 NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
JBrowse link
G Cdh8 cadherin 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:25126785)
Ensembl
RGD
PMID:25126785 GO_REF:0000107 NCBI chr19:5,494,038...5,901,810
Ensembl chr19:5,494,174...5,895,669
JBrowse link
G Cntnap4 contactin associated protein family member 4 involved_in ISO (PMID:24870235) RGD PMID:24870235 NCBI chr19:40,568,684...40,861,879
Ensembl chr19:40,568,684...40,854,656
JBrowse link
G Cttnbp2 cortactin binding protein 2 involved_in IDA
IBA
IMP
PMID:22262902
GO_REF:0000033
GO_Central PMID:22262902 PMID:22262902 GO_REF:0000033, RGD:13702362, RGD:13702362 NCBI chr 4:46,800,975...46,964,681
Ensembl chr 4:46,800,981...46,964,631
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:27707967) RGD PMID:27707967 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:25318560) RGD PMID:25318560 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
JBrowse link
G Etv5 ETS variant transcription factor 5 acts_upstream_of_or_within ISO MGI:3589421 (PMID:17785180) RGD PMID:17785180 NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215
JBrowse link
G Gpm6a glycoprotein m6a involved_in IDA
IMP
PMID:27793698 SynGO PMID:27793698 PMID:27793698 RGD:13702167, RGD:13702167 NCBI chr16:36,641,282...36,973,377
Ensembl chr16:36,641,284...36,973,475
JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:25792749)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25792749 GO_REF:0000024 GO_REF:0000107 NCBI chr17:83,777,625...84,244,428
Ensembl chr17:83,834,569...84,244,428
JBrowse link
G Igsf9 immunoglobulin superfamily, member 9 acts_upstream_of_or_within ISO MGI:3784989 (PMID:24647940) RGD PMID:24647940 NCBI chr13:84,948,643...84,965,616
Ensembl chr13:84,948,619...84,965,607
JBrowse link
G Il10 interleukin 10 IDA RGD PMID:24278397 RGD:11049480 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha IMP RGD PMID:24278397 RGD:11049480 NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061
JBrowse link
G Klk8 kallikrein related-peptidase 8 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:11273653)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11273653 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:94,251,803...94,258,646
Ensembl chr 1:94,251,803...94,258,646
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in IDA
IMP
PMID:19442733 SynGO PMID:19442733 PMID:19442733 RGD:11069248, RGD:11069248 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in IDA
EXP
PMID:11827984 SynGO PMID:11827984 PMID:11827984 RGD:1599809, RGD:1599809 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3529811 (PMID:19345204)
GO_REF:0000033
RGD
GO_Central
PMID:19345204 GO_REF:0000033 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISO (PMID:28871037) RGD PMID:28871037 NCBI chr 4:170,164,071...170,374,790
Ensembl chr 4:170,164,431...170,374,771
JBrowse link
G Ptprt protein tyrosine phosphatase, receptor type, T involved_in IMP
IDA
PMID:19816407 SynGO PMID:19816407 PMID:19816407 RGD:13702429, RGD:13702429 NCBI chr 3:150,189,343...151,288,145
Ensembl chr 3:150,194,859...151,288,124
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 involved_in IDA
IMP
PMID:23303958 SynGO PMID:23303958 PMID:23303958 RGD:13702404, RGD:13702404 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 involved_in IMP
IDA
PMID:23303958 SynGO PMID:23303958 PMID:23303958 RGD:13702404, RGD:13702404 NCBI chr 3:152,520,982...152,585,070
Ensembl chr 3:152,524,095...152,584,780
JBrowse link
G Septin11 septin 11 involved_in IMP
IDA
PMID:19380581 SynGO PMID:19380581 PMID:19380581 RGD:13702154, RGD:13702154 NCBI chr14:14,844,759...14,990,856
Ensembl chr14:14,844,580...14,990,853
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (PMID:25429150) RGD PMID:25429150 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in IMP
IDA
PMID:27273464 SynGO PMID:27273464 PMID:27273464 RGD:13702200, RGD:13702200 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:27273464) RGD PMID:27273464 NCBI chr  X:145,246,448...145,259,983
Ensembl chr  X:145,246,460...145,271,220
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:142,706,495...142,718,968
Ensembl chr  X:142,706,338...142,718,575
JBrowse link
G Sparc secreted protein acidic and cysteine rich involved_in EXP
IBA
IDA
PMID:21788491
GO_REF:0000033
GO_Central PMID:21788491 PMID:21788491 GO_REF:0000033, RGD:13702385, RGD:13702385 NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396
JBrowse link
G Sparcl1 SPARC like 1 involved_in EXP
IBA
IDA
PMID:21788491
GO_REF:0000033
GO_Central PMID:21788491 PMID:21788491 GO_REF:0000033, RGD:13702385, RGD:13702385 NCBI chr14:5,632,816...5,663,866
Ensembl chr14:5,632,569...5,663,865
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:16547515) RGD PMID:16547515 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO (PMID:26658218) RGD PMID:26658218 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
JBrowse link
G Tubb5 tubulin, beta 5 class I involved_in ISO (PMID:24833723) RGD PMID:24833723 NCBI chr20:2,912,779...2,916,928
Ensembl chr20:2,912,778...2,916,940
JBrowse link
G Vcp valosin-containing protein involved_in IDA
IMP
PMID:22105171 SynGO PMID:22105171 PMID:22105171 RGD:13702359, RGD:13702359 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:18986540) RGD PMID:18986540 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18986540) RGD PMID:18986540 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in ISO (PMID:25611509) RGD PMID:25611509 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
JBrowse link
G C1ql1 complement C1q like 1 involved_in ISO (PMID:25611509) RGD PMID:25611509 NCBI chr10:87,902,125...87,909,556
Ensembl chr10:87,902,137...87,909,310
JBrowse link
G Cd47 Cd47 molecule involved_in ISO (PMID:30308165) RGD PMID:30308165 NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IDA
IMP
EXP
PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Epha4 Eph receptor A4 involved_in IMP
IEP
EXP
IDA
PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:24831527)
Ensembl
RGD
PMID:24831527 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISO (PMID:17143272) RGD PMID:17143272 NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914
JBrowse link
G Plxnc1 plexin C1 involved_in ISO (PMID:24831527) RGD PMID:24831527 NCBI chr 7:29,390,038...29,543,985
Ensembl chr 7:29,390,048...29,543,779
JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in ISO (PMID:22678360) RGD PMID:22678360 NCBI chr10:63,369,456...63,393,016
Ensembl chr10:63,369,456...63,392,822
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO (PMID:34407949) RGD PMID:34407949 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
regulation of synapse structural plasticity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA
ISO
GO_REF:0000107
GO:0051247 (PMID:20164328)
Ensembl
RGD
PMID:20164328 GO_REF:0000107 NCBI chr 1:116,711,559...116,837,269
Ensembl chr 1:116,714,711...116,837,240
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (PMID:15034585) RGD PMID:15034585 NCBI chr 4:109,294,249...110,443,409
Ensembl chr 4:109,293,978...110,443,522
JBrowse link
G Dmpk DM1 protein kinase involved_in ISO (PMID:12612014) RGD PMID:12612014 NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:22216301 RGD:6907446 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Ncan neurocan acts_upstream_of_or_within ISO MGI:2182149 (PMID:11486035) RGD PMID:11486035 NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
JBrowse link
regulation of synaptic activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin acts_upstream_of_or_within ISO (PMID:24753587) RGD PMID:24753587 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(PMID:18599437), (PMID:18599438), (PMID:22496871)
UniProt
RGD
PMID:18599437 PMID:18599438 PMID:22496871 GO_REF:0000024 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Sybu syntabulin IMP RGD PMID:19828815 RGD:13217418 NCBI chr 7:75,847,000...75,948,919
Ensembl chr 7:75,847,003...75,948,828
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857733 (PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:42,586,704...42,742,609
Ensembl chr 7:42,586,719...42,730,550
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,846,888...95,849,628
Ensembl chr 1:95,846,243...95,849,977
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:96,406,800...96,417,779
Ensembl chr 3:96,406,813...96,417,728
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1929066 (PMID:8653786)
UniProt
RGD
PMID:8653786 GO_REF:0000024 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
JBrowse link
G Pdzd11 PDZ domain containing 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:65,718,689...65,721,742
Ensembl chr  X:65,704,067...65,721,642
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (PMID:21884692) RGD PMID:21884692 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (PMID:21884692) RGD PMID:21884692 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IDA
IMP
PMID:27480238 SynGO PMID:27480238 PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:85,616,862...85,623,725
Ensembl chr 1:85,616,868...85,623,725
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IMP
IDA
PMID:23751499 SynGO PMID:23751499 PMID:23751499 RGD:13702234, RGD:13702234 NCBI chr 4:14,386,389...15,870,036
Ensembl chr 4:14,386,399...15,870,240
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
GO_REF:0000107
(PMID:17988630)
Ensembl
RGD
PMID:17988630 GO_REF:0000107 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) RGD PMID:27608760 NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
JBrowse link
G Pcdh8 protocadherin 8 involved_in IDA
IMP
PMID:17988630 SynGO PMID:17988630 PMID:17988630 RGD:13702360, RGD:13702360 NCBI chr15:55,198,470...55,203,039
Ensembl chr15:55,198,459...55,205,872
JBrowse link
G Taok2 TAO kinase 2 involved_in IDA
IEP
IMP
PMID:17988630 SynGO PMID:17988630 PMID:17988630 PMID:17988630 RGD:13702360, RGD:13702360, RGD:13702360 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
JBrowse link
regulation of terminal button organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn3 neuroligin 3 involved_in ISS
ISO
GO_REF:0000024
PMID:21808020
(PMID:21808020)
BHF-UCL
RGD
PMID:21808020 PMID:21808020 GO_REF:0000024, RGD:8553412 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:22851330 RGD:13506174 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:22851330 RGD:13506174 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26618722) RGD PMID:26618722 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    biological regulation 13819
      regulation of biological quality 3445
        regulation of synapse structure or activity 417
          regulation of synapse organization + 410
          regulation of synaptic activity 3
paths to the root