ONTOLOGY REPORT - ANNOTATIONS |
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| Term: | positive regulation of neurogenesis |
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| Accession: | GO:0050769
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browse the term
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| Definition: | Any process that activates or increases the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. |
| Synonyms: | exact_synonym: | up regulation of neurogenesis; upregulation of neurogenesis |
| | narrow_synonym: | activation of neurogenesis; stimulation of neurogenesis |
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Ace
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angiotensin I converting enzyme
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IMP
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RGD |
PMID:20122169 |
RGD:2325223 |
NCBI chr10:91,410,129...91,430,246
Ensembl chr10:91,409,819...91,430,942
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Ascl1
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achaete-scute family bHLH transcription factor 1
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acts_upstream_of_or_within
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IEA ISO
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GO_REF:0000107 MGI:1857470 (PMID:16469766)
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Ensembl RGD |
PMID:16469766 |
GO_REF:0000107 |
NCBI chr 7:23,790,642...23,793,509
Ensembl chr 7:23,790,360...23,798,231
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Bmp2
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bone morphogenetic protein 2
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acts_upstream_of_or_within
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IDA
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PMID:8616889
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MGI |
PMID:8616889 |
RGD:8553354 |
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:141,264,646...141,274,760
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Cx3cr1
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C-X3-C motif chemokine receptor 1
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involved_in
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ISO
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(PMID:20018408)
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RGD |
PMID:20018408 |
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NCBI chr 8:128,661,294...128,679,048
Ensembl chr 8:128,654,833...128,685,983
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Cxcr4
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C-X-C motif chemokine receptor 4
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IMP
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RGD |
PMID:28104461 |
RGD:13463105 |
NCBI chr13:42,630,383...42,634,288
Ensembl chr13:42,630,104...42,634,459
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Dll3
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delta like canonical Notch ligand 3
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IDA
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RGD |
PMID:16144902 |
RGD:1599776 |
NCBI chr 1:92,689,577...92,698,125
Ensembl chr 1:92,689,577...92,697,406
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Drd2
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dopamine receptor D2
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involved_in
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IDA IEA
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GO_REF:0000117
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UniProt RGD |
PMID:27638511 |
GO_REF:0000117, RGD:13506952 |
NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:58,605,403...58,669,339
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Ell3
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elongation factor for RNA polymerase II 3
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acts_upstream_of_or_within
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ISO
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(PMID:22768269)
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RGD |
PMID:22768269 |
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NCBI chr 3:128,866,755...128,870,896
Ensembl chr 3:128,864,777...128,870,852
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Faim
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Fas apoptotic inhibitory molecule
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IMP
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RGD |
PMID:15520226 |
RGD:1357927 |
NCBI chr 8:108,423,259...108,445,365
Ensembl chr 8:108,423,221...108,440,151
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Gh1
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growth hormone 1
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IDA
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RGD |
PMID:19524466 |
RGD:2315620 |
NCBI chr10:91,727,883...91,729,860
Ensembl chr10:91,727,884...91,729,859
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Gper1
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G protein-coupled estrogen receptor 1
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:23545157)
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UniProt RGD |
PMID:23545157 |
GO_REF:0000024 |
NCBI chr12:20,331,073...20,336,527
Ensembl chr12:20,327,679...20,337,144
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Gprasp3
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G protein-coupled receptor associated sorting protein family member 3
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:21199326)
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Ensembl RGD |
PMID:21199326 |
GO_REF:0000107 |
NCBI chr X:103,639,366...103,644,561
Ensembl chr X:103,609,243...103,650,463
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Hap1
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huntingtin-associated protein 1
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:24355921)
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Ensembl RGD |
PMID:24355921 |
GO_REF:0000107 |
NCBI chr10:85,778,267...85,786,553
Ensembl chr10:85,778,267...85,786,503
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Ifng
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interferon gamma
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involved_in
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ISO
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UniProtKB:P05067|UniProtKB:P10636|UniProtKB:P49768 (PMID:19808651)
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RGD |
PMID:19808651 |
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NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:55,761,736...55,793,216
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Jade2
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jade family PHD finger 2
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acts_upstream_of_or_within
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ISO
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(PMID:25018020)
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RGD |
PMID:25018020 |
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NCBI chr10:36,576,187...36,625,129
Ensembl chr10:36,576,187...36,623,532
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Kdr
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kinase insert domain receptor
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IEP
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RGD |
PMID:15258583 |
RGD:1581594 |
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,572,049...32,615,192
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Khdc3
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KH domain containing 3, subcortical maternal complex member
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:33115731)
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UniProt RGD |
PMID:33115731 |
GO_REF:0000024 |
NCBI chr 8:82,722,980...82,724,884
Ensembl chr 8:82,722,980...82,724,884
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Lig4
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DNA ligase 4
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acts_upstream_of_or_within
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ISO
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MGI:1857720|MGI:1857732 (PMID:10716994), (PMID:16777961), (PMID:9875844)
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RGD |
PMID:9875844 PMID:10716994 PMID:16777961 |
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NCBI chr16:86,220,345...86,228,930
Ensembl chr16:86,220,279...86,229,926
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Lrp2
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LDL receptor related protein 2
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:20460439) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:20460439 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:74,597,148...74,754,535
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Man2a1
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mannosidase, alpha, class 2A, member 1
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acts_upstream_of_or_within
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ISO
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MGI:2159011|MGI:2673381 (PMID:20144606)
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RGD |
PMID:20144606 |
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NCBI chr 9:111,698,913...111,855,257
Ensembl chr 9:111,698,913...111,867,850
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Mir124-1
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microRNA 124-1
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acts_upstream_of_or_within
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ISO
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(PMID:17403776)
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RGD |
PMID:17403776 |
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NCBI chr15:43,017,834...43,017,918
Ensembl chr15:43,017,834...43,017,918
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Mir124-2
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microRNA 124-2
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acts_upstream_of_or_within
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ISO
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(PMID:17403776)
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RGD |
PMID:17403776 |
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NCBI chr 2:102,051,095...102,051,203
Ensembl chr 2:102,051,095...102,051,203
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Mir124-3
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microRNA 124-3
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acts_upstream_of_or_within
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ISO
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(PMID:17403776)
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RGD |
PMID:17403776 |
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NCBI chr 3:188,392,522...188,392,608
Ensembl chr 3:188,392,522...188,392,608
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Mme
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membrane metallo-endopeptidase
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involved_in
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ISO IEA
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UniProtKB:P05067 (PMID:24825898) GO_REF:0000107
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RGD Ensembl |
PMID:24825898 |
GO_REF:0000107 |
NCBI chr 2:149,806,826...149,957,381
Ensembl chr 2:149,872,291...149,953,463
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Mtor
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mechanistic target of rapamycin kinase
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IMP
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RGD |
PMID:19474323 |
RGD:10041000 |
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435
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Nap1l1
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nucleosome assembly protein 1-like 1
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involved_in
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IEA ISO ISS
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GO_REF:0000107 (PMID:29490266) GO_REF:0000024
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Ensembl RGD UniProt |
PMID:29490266 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:48,819,464...48,844,108
Ensembl chr 7:48,819,477...48,844,104
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Numb
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NUMB, endocytic adaptor protein
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involved_in
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IEA ISO IBA
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GO_REF:0000104 (PMID:12410312) GO_REF:0000117 GO_REF:0000107 GO_REF:0000033
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UniProt RGD Ensembl GO_Central |
PMID:12410312 |
GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 |
NCBI chr 6:109,162,499...109,284,527
Ensembl chr 6:109,162,499...109,284,463
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Numbl
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NUMB-like, endocytic adaptor protein
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involved_in
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ISS ISO IEA IBA
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GO_REF:0000024 (PMID:12410312) GO_REF:0000117 GO_REF:0000107 GO_REF:0000033 GO_REF:0000104
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UniProt RGD Ensembl GO_Central |
PMID:12410312 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 |
NCBI chr 1:91,677,437...91,701,415
Ensembl chr 1:91,677,242...91,701,424
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Oprm1
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opioid receptor, mu 1
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:16682964)
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UniProt RGD |
PMID:16682964 |
GO_REF:0000024 |
NCBI chr 1:45,565,371...45,818,722
Ensembl chr 1:45,565,371...45,638,756
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Rassf10
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Ras association domain family member 10
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involved_in
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ISO
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(PMID:29490266)
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RGD |
PMID:29490266 |
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NCBI chr 1:176,492,814...176,498,127
Ensembl chr 1:176,492,839...176,495,758
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Rgs14
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regulator of G-protein signaling 14
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involved_in
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IMP
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PMID:19319189
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UniProt |
PMID:19319189 |
RGD:8554645 |
NCBI chr17:9,254,112...9,268,233
Ensembl chr17:9,254,149...9,268,233
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Serpinf1
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serpin family F member 1
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involved_in
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ISO
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(PMID:8226833)
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RGD |
PMID:8226833 |
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NCBI chr10:60,748,504...60,760,898
Ensembl chr10:60,748,506...60,760,898
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Snw1
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SNW domain containing 1
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involved_in
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ISO
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(PMID:19934264)
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RGD |
PMID:19934264 |
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NCBI chr 6:112,826,374...112,850,459
Ensembl chr 6:112,826,381...112,858,180
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Sox11
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SRY-box transcription factor 11
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:19490090) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:19490090 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:49,736,773...49,738,794
Ensembl chr 6:49,736,304...49,738,691
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Spen
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spen family transcriptional repressor
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involved_in
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ISO IEA
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(PMID:16287852) GO_REF:0000107
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RGD Ensembl |
PMID:16287852 |
GO_REF:0000107 |
NCBI chr 5:159,058,258...159,131,789
Ensembl chr 5:159,058,258...159,165,934
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Srrt
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serrate, RNA effector molecule
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:22198669)
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Ensembl RGD |
PMID:22198669 |
GO_REF:0000107 |
NCBI chr12:25,027,883...25,042,847
Ensembl chr12:25,029,334...25,042,845
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Star
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steroidogenic acute regulatory protein
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IMP
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RGD |
PMID:16579833 |
RGD:1600078 |
NCBI chr16:72,969,824...72,974,447
Ensembl chr16:72,961,518...72,974,447
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Tgm2
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transglutaminase 2
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involved_in
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ISO
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(PMID:30867594)
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RGD |
PMID:30867594 |
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NCBI chr 3:167,192,612...167,221,845
Ensembl chr 3:167,192,612...167,304,240
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| G
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Tle6
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TLE family member 6, subcortical maternal complex member
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acts_upstream_of_or_within
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ISO
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(PMID:16314515)
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RGD |
PMID:16314515 |
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NCBI chr 7:8,757,846...8,769,405
Ensembl chr 7:8,759,925...8,769,404
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Trim32
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tripartite motif-containing 32
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involved_in
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ISO
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(PMID:19269368)
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RGD |
PMID:19269368 |
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NCBI chr 5:84,020,604...84,031,483
Ensembl chr 5:84,014,803...84,042,748
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Wnt2
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Wnt family member 2
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involved_in
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ISO
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(PMID:20018874)
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RGD |
PMID:20018874 |
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NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:47,294,300...47,421,976
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Xrcc2
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X-ray repair cross complementing 2
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acts_upstream_of_or_within
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IEA ISO
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GO_REF:0000107 MGI:3654106 (PMID:16777961)
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Ensembl RGD |
PMID:16777961 |
GO_REF:0000107 |
NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:10,157,800...10,176,407
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| G
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Xrcc4
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X-ray repair cross complementing 4
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acts_upstream_of_or_within
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ISO
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MGI:1926771 (PMID:9875844)
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RGD |
PMID:9875844 |
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NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:22,686,508...22,933,160
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| G
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Xrcc5
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X-ray repair cross complementing 5
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acts_upstream_of_or_within
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ISO
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MGI:2179987 (PMID:10716994)
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RGD |
PMID:10716994 |
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NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:81,375,863...81,493,293
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| G
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Xrcc6
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X-ray repair cross complementing 6
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acts_upstream_of_or_within
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ISO
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MGI:2179954 (PMID:10716994)
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RGD |
PMID:10716994 |
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NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:115,422,662...115,443,884
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Zfp335
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zinc finger protein 335
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involved_in
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ISO IEA IBA
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(PMID:23178126) GO_REF:0000117 GO_REF:0000107 GO_REF:0000033
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RGD UniProt Ensembl GO_Central |
PMID:23178126 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 |
NCBI chr 3:174,046,789...174,073,076
Ensembl chr 3:174,046,243...174,067,534
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Csf1r
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colony stimulating factor 1 receptor
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IMP
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RGD |
PMID:33841088 |
RGD:151665762 |
NCBI chr18:56,834,152...56,860,804
Ensembl chr18:56,817,049...56,860,806
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| G
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Ttbk1
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tau tubulin kinase 1
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acts_upstream_of
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ISO IEA
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(PMID:16923168) GO_REF:0000107
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RGD Ensembl |
PMID:16923168 |
GO_REF:0000107 |
NCBI chr 9:21,990,973...22,035,961
Ensembl chr 9:21,990,973...22,035,961
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Actr3
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actin related protein 3
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IMP
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RGD |
PMID:23843614 |
RGD:8553949 |
NCBI chr13:39,353,413...39,396,509
Ensembl chr13:39,353,079...39,396,711
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Bin1
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bridging integrator 1
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involved_in
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ISO ISS IEA
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(PMID:10412034) GO_REF:0000024 GO_REF:0000107
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RGD Alzheimers_University_of_Toronto Ensembl |
PMID:10412034 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr18:24,282,840...24,341,461
Ensembl chr18:24,283,801...24,341,458
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| G
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Bmp2
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bone morphogenetic protein 2
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acts_upstream_of_or_within
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IEA ISO
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GO_REF:0000107 MGI:99414 (PMID:10486560), (PMID:15882580)
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Ensembl RGD |
PMID:10486560 PMID:15882580 |
GO_REF:0000107 |
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:141,264,646...141,274,760
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| G
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Clcf1
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cardiotrophin-like cytokine factor 1
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involved_in
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ISO
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(PMID:12090754)
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RGD |
PMID:12090754 |
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NCBI chr 1:210,937,763...210,947,064
Ensembl chr 1:210,937,255...210,947,064
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| G
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Hes1
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hes family bHLH transcription factor 1
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involved_in
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IEA ISO ISS
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GO_REF:0000107 (PMID:12666205) GO_REF:0000024
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Ensembl RGD UniProt |
PMID:12666205 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061
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| G
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Id2
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inhibitor of DNA binding 2
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acts_upstream_of_or_within
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ISO
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MGI:3830733 (PMID:19109490)
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RGD |
PMID:19109490 |
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NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:47,457,554...47,472,961
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| G
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Il1b
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interleukin 1 beta
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IDA
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RGD |
PMID:22270046 |
RGD:6482669 |
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
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| G
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Il6st
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interleukin 6 cytokine family signal transducer
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acts_upstream_of_or_within
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ISO
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(PMID:10486560)
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RGD |
PMID:10486560 |
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NCBI chr 2:45,798,872...45,839,501
Ensembl chr 2:45,799,380...45,843,182
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| G
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Lif
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LIF, interleukin 6 family cytokine
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acts_upstream_of_or_within
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ISO
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(PMID:10486560)
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RGD |
PMID:10486560 |
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NCBI chr14:83,354,602...83,364,053
Ensembl chr14:83,358,164...83,364,053
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| G
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Mag
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myelin-associated glycoprotein
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IDA
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RGD |
PMID:19349915 |
RGD:9685287 |
NCBI chr 1:95,275,728...95,291,133
Ensembl chr 1:95,275,635...95,291,060
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| G
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Notch1
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notch receptor 1
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:12666205) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:12666205 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613
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| G
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Prpf19
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pre-mRNA processing factor 19
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acts_upstream_of_or_within involved_in
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IMP ISO IEA
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(PMID:16352598) GO_REF:0000117
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RGD UniProt |
PMID:16352598 PMID:23769735 |
GO_REF:0000117, RGD:10045891 |
NCBI chr 1:216,966,104...216,977,549
Ensembl chr 1:216,966,462...216,980,506
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| G
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Serpine2
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serpin family E member 2
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involved_in
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ISO IEA
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(PMID:1691280) GO_REF:0000107
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RGD Ensembl |
PMID:1691280 |
GO_REF:0000107 |
NCBI chr 9:88,573,138...88,637,252
Ensembl chr 9:88,573,149...88,637,202
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| G
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Shh
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sonic hedgehog signaling molecule
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acts_upstream_of_or_within
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IEA
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GO_REF:0000107
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Ensembl |
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GO_REF:0000107 |
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:7,687,846...7,697,901
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| G
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Adcy10
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adenylate cyclase 10
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IMP
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RGD |
PMID:22649251 |
RGD:329347828 |
NCBI chr13:80,280,595...80,366,939
Ensembl chr13:80,284,295...80,366,926
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| G
|
Adnp
|
activity-dependent neuroprotector homeobox
|
|
IDA
|
|
RGD |
PMID:19047645 |
RGD:2312772 |
NCBI chr 3:177,310,258...177,340,379
Ensembl chr 3:177,310,258...177,336,188
|
|
| G
|
Anapc2
|
anaphase promoting complex subunit 2
|
|
IMP
|
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr 3:28,484,590...28,496,338
Ensembl chr 3:28,484,614...28,496,337
|
|
| G
|
Apoe
|
apolipoprotein E
|
|
IDA
|
|
RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:88,481,385...88,485,855
|
|
| G
|
Arhgap32
|
Rho GTPase activating protein 32
|
|
IMP
|
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr 8:38,679,368...38,939,960
Ensembl chr 8:38,684,484...38,939,960
|
|
| G
|
Atp5mc1
|
ATP synthase membrane subunit c locus 1
|
|
IMP
|
|
RGD |
PMID:22209705 |
RGD:13800744 |
NCBI chr10:81,520,762...81,523,735
Ensembl chr10:81,520,765...81,523,363
|
|
| G
|
Cdh4
|
cadherin 4
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:14586016)
|
Ensembl RGD |
PMID:14586016 |
GO_REF:0000107 |
NCBI chr 3:186,902,763...187,381,020
Ensembl chr 3:186,902,751...187,381,020
|
|
| G
|
Cdkl5
|
cyclin-dependent kinase-like 5
|
involved_in
|
IMP IBA
|
PMID:20861382 GO_REF:0000033
|
GO_Central |
PMID:20861382 |
GO_REF:0000033, RGD:8554575 |
NCBI chr X:37,566,320...37,796,766
Ensembl chr X:37,566,378...37,796,760
|
|
| G
|
Ctnnd2
|
catenin delta 2
|
|
IMP
|
|
RGD |
PMID:32554807 |
RGD:407532699 |
NCBI chr 2:82,879,469...83,727,409
Ensembl chr 2:82,879,469...83,727,409
|
|
| G
|
Cyfip1
|
cytoplasmic FMR1 interacting protein 1
|
|
IMP
|
|
RGD |
PMID:16260607 |
RGD:11557987 |
NCBI chr 1:115,842,754...115,935,163
Ensembl chr 1:115,846,661...115,951,292
|
|
| G
|
Dbn1
|
drebrin 1
|
involved_in
|
IMP IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:19222710 |
GO_REF:0000033, RGD:10395284 |
NCBI chr17:9,155,729...9,170,121
Ensembl chr17:9,155,787...9,170,122
|
|
| G
|
Dbnl
|
drebrin-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:84,880,085...84,895,122
Ensembl chr14:84,880,142...84,897,133
|
|
| G
|
Disc1
|
DISC1 scaffold protein
|
|
IMP
|
|
RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr19:69,911,548...70,120,970
Ensembl chr19:69,911,976...70,120,970
|
|
| G
|
Eif2b2
|
eukaryotic translation initiation factor 2B subunit beta
|
|
IMP
|
|
RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 6:110,597,979...110,604,403
Ensembl chr 6:110,597,729...110,604,403
|
|
| G
|
Eif4g2
|
eukaryotic translation initiation factor 4, gamma 2
|
|
IMP
|
|
RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 1:174,616,102...174,628,252
Ensembl chr 1:174,616,103...174,628,252
|
|
| G
|
Ep300
|
E1A binding protein p300
|
|
IMP
|
|
RGD |
PMID:19339625 |
RGD:2308917 |
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:114,946,982...115,058,574
|
|
| G
|
Fn1
|
fibronectin 1
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:12879062)
|
Ensembl RGD |
PMID:12879062 |
GO_REF:0000107 |
NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:80,645,507...80,714,137
|
|
| G
|
Fxn
|
frataxin
|
|
IMP
|
|
RGD |
PMID:18809400 |
RGD:2306797 |
NCBI chr 1:231,300,457...231,323,989
Ensembl chr 1:231,300,150...231,323,989
|
|
| G
|
Gdi1
|
GDP dissociation inhibitor 1
|
|
IMP
|
|
RGD |
PMID:9620768 |
RGD:13208823 |
NCBI chr X:157,238,900...157,245,562
Ensembl chr X:157,238,892...157,245,560
|
|
| G
|
Golga4
|
golgin A4
|
involved_in
|
ISO
|
(PMID:22705394)
|
RGD |
PMID:22705394 |
|
NCBI chr 8:127,085,830...127,163,227
Ensembl chr 8:127,085,848...127,163,603
|
|
| G
|
Gsk3b
|
glycogen synthase kinase 3 beta
|
acts_upstream_of_or_within
|
ISO
|
MGI:106658|MGI:98927 (PMID:24623780)
|
RGD |
PMID:24623780 |
|
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249
|
|
| G
|
Ilk
|
integrin-linked kinase
|
|
IMP
|
shorter axons following Ilk inhibition or knock-down
|
RGD |
PMID:17490631 |
RGD:2301744 |
NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:169,498,681...169,506,964
|
|
| G
|
Islr2
|
immunoglobulin superfamily containing leucine-rich repeat 2
|
involved_in
|
IBA ISO
|
GO_REF:0000033 (PMID:19755105)
|
GO_Central RGD |
PMID:19755105 |
GO_REF:0000033 |
NCBI chr 8:67,504,042...67,512,125
Ensembl chr 8:67,504,037...67,513,708
|
|
| G
|
L1cam
|
L1 cell adhesion molecule
|
involved_in
|
IMP
|
PMID:18519736
|
UniProt |
PMID:18519736 |
RGD:10054086 |
NCBI chr X:156,748,597...156,775,116
Ensembl chr X:156,748,597...156,775,077
|
|
| G
|
Limk1
|
LIM domain kinase 1
|
involved_in acts_upstream_of_or_within
|
ISS ISO IEA
|
GO_REF:0000024 MGI:1921382 (PMID:16204183) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:16204183 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr12:27,663,177...27,697,085
Ensembl chr12:27,663,018...27,697,209
|
|
| G
|
Lrp1
|
LDL receptor related protein 1
|
|
IMP
|
|
RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:65,265,639...65,346,196
|
|
| G
|
Macf1
|
microtubule-actin crosslinking factor 1
|
involved_in
|
ISO
|
(PMID:22705394)
|
RGD |
PMID:22705394 |
|
NCBI chr 5:140,908,829...141,234,127
Ensembl chr 5:140,908,837...141,233,890
|
|
| G
|
Map1b
|
microtubule-associated protein 1B
|
|
IMP
|
|
RGD |
PMID:8838670 |
RGD:2304034 |
NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:32,551,423...32,657,094
|
|
| G
|
Map3k13
|
mitogen-activated protein kinase kinase kinase 13
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:27511108)
|
Ensembl RGD |
PMID:27511108 |
GO_REF:0000107 |
NCBI chr11:92,596,436...92,741,717
Ensembl chr11:92,601,738...92,739,663
|
|
| G
|
Mapt
|
microtubule-associated protein tau
|
involved_in
|
ISO ISS
|
(PMID:1389180) GO_REF:0000024
|
RGD UniProt |
PMID:1389180 |
GO_REF:0000024 |
NCBI chr10:89,638,618...89,736,108
Ensembl chr10:89,638,599...89,736,108
|
|
| G
|
Myo5b
|
myosin Vb
|
|
IMP
|
|
RGD |
PMID:23770993 |
RGD:11533641 |
NCBI chr18:70,313,717...70,613,918
Ensembl chr18:70,311,990...70,613,918
|
|
| G
|
Ndel1
|
nudE neurodevelopment protein 1-like 1
|
|
IMP
|
|
RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr10:54,001,435...54,080,909
Ensembl chr10:54,016,149...54,062,375
|
|
| G
|
Ngf
|
nerve growth factor
|
acts_upstream_of_or_within
|
ISO
|
(PMID:18052984), (PMID:8861722)
|
RGD |
PMID:8861722 PMID:18052984 |
|
NCBI chr 2:192,589,580...192,642,971
Ensembl chr 2:192,589,582...192,643,834
|
|
| G
|
Ntn1
|
netrin 1
|
involved_in acts_upstream_of_or_within
|
IDA ISO IEA
|
PMID:23453953 (PMID:10704383) GO_REF:0000117
|
RGD UniProt |
PMID:10704383 PMID:23453953 |
GO_REF:0000117, RGD:10054078 |
NCBI chr10:53,398,852...53,597,595
Ensembl chr10:53,398,852...53,584,060
|
|
| G
|
Pafah1b1
|
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
|
|
IMP
|
|
RGD |
PMID:17522326 PMID:17202468 |
RGD:4107033, RGD:4107038 |
NCBI chr10:60,031,441...60,090,259
Ensembl chr10:60,032,514...60,090,196
|
|
| G
|
Pak1
|
p21 (RAC1) activated kinase 1
|
|
IMP
|
|
RGD |
PMID:23453953 |
RGD:10054078 |
NCBI chr 1:161,522,399...161,637,623
Ensembl chr 1:161,491,847...161,637,612
|
|
| G
|
Pou4f2
|
POU class 4 homeobox 2
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:10357904) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:10357904 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:46,390,958...46,394,599
Ensembl chr19:46,390,958...46,394,599
|
|
| G
|
Rpl4
|
ribosomal protein L4
|
|
IMP
|
|
RGD |
PMID:10964612 |
RGD:11039443 |
NCBI chr 8:73,566,477...73,571,600
Ensembl chr 8:73,566,466...73,571,788
|
|
| G
|
Rufy3
|
RUN and FYVE domain containing 3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:24720729)
|
UniProt RGD |
PMID:24720729 |
GO_REF:0000024 |
NCBI chr14:19,715,593...19,790,530
Ensembl chr14:19,715,593...19,790,608
|
|
| G
|
Sema7a
|
semaphorin 7A (John Milton Hagen blood group)
|
involved_in acts_upstream_of_or_within
|
ISO IEA
|
(PMID:12879062) GO_REF:0000117 GO_REF:0000107
|
RGD UniProt Ensembl |
PMID:12879062 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 8:67,244,318...67,267,060
Ensembl chr 8:67,243,824...67,267,058
|
|
| G
|
Shtn1
|
shootin 1
|
involved_in
|
IDA
|
PMID:23453953 PMID:18519736
|
UniProt |
PMID:23453953 PMID:18519736 |
RGD:10054078, RGD:10054086 |
NCBI chr 1:268,108,095...268,211,947
Ensembl chr 1:268,108,097...268,211,947
|
|
| G
|
Smurf1
|
SMAD specific E3 ubiquitin protein ligase 1
|
|
IMP
|
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr12:14,748,717...14,840,273
Ensembl chr12:14,749,043...14,840,273
|
|
| G
|
Srf
|
serum response factor
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:1861437|MGI:3522206|MGI:98927 (PMID:24623780)
|
Ensembl RGD |
PMID:24623780 |
GO_REF:0000107 |
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:21,924,076...21,933,337
|
|
| G
|
Tnfrsf12a
|
TNF receptor superfamily member 12A
|
acts_upstream_of_or_within
|
ISO
|
(PMID:14573547)
|
RGD |
PMID:14573547 |
|
NCBI chr10:13,211,670...13,213,666
Ensembl chr10:13,211,673...13,213,704
|
|
| G
|
Trpc5
|
transient receptor potential cation channel, subfamily C, member 5
|
|
IMP
|
|
RGD |
PMID:21984481 |
RGD:10043835 |
NCBI chr X:112,742,828...113,027,638
Ensembl chr X:112,742,828...113,027,638
|
|
| G
|
Trpv2
|
transient receptor potential cation channel, subfamily V, member 2
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:20357111)
|
Ensembl RGD |
PMID:20357111 |
GO_REF:0000107 |
NCBI chr10:47,772,223...47,797,956
Ensembl chr10:47,764,839...47,793,533
|
|
| G
|
Twf2
|
twinfilin actin-binding protein 2
|
involved_in
|
ISO IEA
|
(PMID:17910947) GO_REF:0000107
|
RGD Ensembl |
PMID:17910947 |
GO_REF:0000107 |
NCBI chr 8:115,723,980...115,737,025
Ensembl chr 8:115,723,970...115,737,025
|
|
| G
|
Zfyve27
|
zinc finger FYVE-type containing 27
|
involved_in
|
ISS ISO IBA IEA
|
GO_REF:0000024 (PMID:24251978) GO_REF:0000033 GO_REF:0000107
|
UniProt RGD GO_Central Ensembl |
PMID:24251978 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:250,929,110...250,952,481
Ensembl chr 1:250,928,012...250,952,481
|
|
|
|
| G
|
Bmpr2
|
bone morphogenetic protein receptor type 2
|
involved_in
|
IEA ISO
|
GO_REF:0000107 UniProtKB:O35607 (PMID:24052814)
|
Ensembl RGD |
PMID:24052814 |
GO_REF:0000107 |
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:68,685,988...68,801,350
|
|
| G
|
Cxcl12
|
C-X-C motif chemokine ligand 12
|
|
IMP
|
|
RGD |
PMID:18701697 |
RGD:2306571 |
NCBI chr 4:152,060,781...152,073,628
Ensembl chr 4:152,060,780...152,073,627
|
|
| G
|
Dscam
|
DS cell adhesion molecule
|
involved_in
|
ISO IEA IBA IMP
|
(PMID:18585357) GO_REF:0000117 GO_REF:0000033 GO_REF:0000107
|
RGD UniProt GO_Central Ensembl |
PMID:18585357 PMID:18585357 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:8553710 |
NCBI chr11:49,391,385...49,976,861
Ensembl chr11:49,347,531...49,976,238
|
|
| G
|
Megf8
|
multiple EGF-like-domains 8
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:24052814) GO_REF:0000107
|
CAFA RGD Ensembl |
PMID:24052814 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:90,030,388...90,079,422
|
|
| G
|
Nrp1
|
neuropilin 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:21658587)
|
Ensembl RGD |
PMID:21658587 |
GO_REF:0000107 |
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:73,256,557...73,411,702
|
|
| G
|
Sema5a
|
semaphorin 5A
|
involved_in
|
IMP
|
PMID:15603739
|
UniProt |
PMID:15603739 |
RGD:8553809 |
NCBI chr 2:85,020,724...85,451,938
Ensembl chr 2:85,020,724...85,451,938
|
|
| G
|
Vegfa
|
vascular endothelial growth factor A
|
NOT|involved_in
|
ISO
|
(PMID:21658587)
|
RGD |
PMID:21658587 |
|
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:22,439,392...22,468,194
|
|
|
|
| G
|
Lrp1
|
LDL receptor related protein 1
|
|
IDA
|
|
RGD |
PMID:23867460 |
RGD:13800520 |
NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:65,265,639...65,346,196
|
|
| G
|
Ntrk3
|
neurotrophic receptor tyrosine kinase 3
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:97380 (PMID:16142215)
|
Ensembl RGD |
PMID:16142215 |
GO_REF:0000107 |
NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
|
|
|
|
| G
|
Ache
|
acetylcholinesterase
|
|
IMP
|
|
RGD |
PMID:12799140 |
RGD:1299197 |
NCBI chr12:25,042,882...25,050,608
Ensembl chr12:25,043,461...25,050,410
|
|
| G
|
Amigo1
|
adhesion molecule with Ig like domain 1
|
involved_in
|
IDA
|
PMID:12629050
|
UniProt |
PMID:12629050 |
RGD:634626 |
NCBI chr 2:198,511,285...198,516,744
Ensembl chr 2:198,511,039...198,521,146
|
|
| G
|
Braf
|
B-Raf proto-oncogene, serine/threonine kinase
|
acts_upstream_of_or_within
|
ISO
|
MGI:1346866|MGI:1346867 (PMID:24733831)
|
RGD |
PMID:24733831 |
|
NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:69,342,813...69,476,931
|
|
| G
|
Chodl
|
chondrolectin
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr11:31,141,030...31,163,342
Ensembl chr11:31,141,021...31,163,334
|
|
| G
|
Cyfip1
|
cytoplasmic FMR1 interacting protein 1
|
|
IMP
|
|
RGD |
PMID:16260607 |
RGD:11557987 |
NCBI chr 1:115,842,754...115,935,163
Ensembl chr 1:115,846,661...115,951,292
|
|
| G
|
Dixdc1
|
DIX domain containing 1
|
|
IMP
|
|
RGD |
PMID:19339625 |
RGD:2308917 |
NCBI chr 8:59,904,218...59,977,595
Ensembl chr 8:59,904,218...59,978,447
|
|
| G
|
Golga2
|
golgin A2
|
acts_upstream_of_or_within
|
ISO
|
(PMID:21111240)
|
RGD |
PMID:21111240 |
|
NCBI chr 3:35,981,783...36,002,023
Ensembl chr 3:35,981,499...36,002,022
|
|
| G
|
Ilk
|
integrin-linked kinase
|
|
IMP
|
more cells without axons following Ilk inhibition or knock-down
|
RGD |
PMID:17490631 |
RGD:2301744 |
NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:169,498,681...169,506,964
|
|
| G
|
Map2k1
|
mitogen activated protein kinase kinase 1
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:1346867|MGI:88190 (PMID:24733831)
|
Ensembl RGD |
PMID:24733831 |
GO_REF:0000107 |
NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:73,578,752...73,650,184
|
|
| G
|
Map2k2
|
mitogen activated protein kinase kinase 2
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:1346866|MGI:88190 (PMID:24733831)
|
Ensembl RGD |
PMID:24733831 |
GO_REF:0000107 |
NCBI chr 7:9,241,449...9,264,216
Ensembl chr 7:9,241,310...9,260,940
|
|
| G
|
Map6
|
microtubule-associated protein 6
|
involved_in
|
IMP IBA
|
PMID:28521134 GO_REF:0000033
|
GO_Central |
PMID:28521134 |
GO_REF:0000033, RGD:13441203 |
NCBI chr 1:162,980,339...163,046,548
Ensembl chr 1:162,980,181...163,046,548
|
|
| G
|
Metrn
|
meteorin, glial cell differentiation regulator
|
involved_in acts_upstream_of_or_within
|
IBA ISO
|
GO_REF:0000033 (PMID:15085178)
|
GO_Central RGD |
PMID:15085178 |
GO_REF:0000033 |
NCBI chr10:15,321,200...15,323,218
Ensembl chr10:15,321,200...15,323,642
|
|
| G
|
Nefl
|
neurofilament light chain
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:7946341)
|
Ensembl RGD |
PMID:7946341 |
GO_REF:0000107 |
NCBI chr15:46,477,330...46,481,203
Ensembl chr15:46,458,204...46,482,515
|
|
| G
|
Nin
|
ninein
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:1344407 (PMID:25741725)
|
Ensembl RGD |
PMID:25741725 |
GO_REF:0000107 |
NCBI chr 6:94,261,382...94,363,679
Ensembl chr 6:94,263,206...94,363,610
|
|
| G
|
Nrdc
|
nardilysin convertase
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:19935654)
|
UniProt RGD |
PMID:19935654 |
GO_REF:0000024 |
NCBI chr 5:128,983,395...129,047,578
Ensembl chr 5:128,984,446...129,050,141
|
|
| G
|
Ntrk2
|
neurotrophic receptor tyrosine kinase 2
|
involved_in
|
IMP
|
PMID:10985347
|
UniProt |
PMID:10985347 |
RGD:8553408 |
NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,564,570...5,874,628
|
|
| G
|
Picalm
|
phosphatidylinositol binding clathrin assembly protein
|
involved_in
|
IMP IEA
|
GO_REF:0000117
|
UniProt RGD |
PMID:18842885 |
GO_REF:0000117, RGD:8554167 |
NCBI chr 1:153,468,982...153,550,086
Ensembl chr 1:153,469,202...153,550,237
|
|
| G
|
Plxnb1
|
plexin B1
|
involved_in acts_upstream_of_or_within
|
IBA ISO IEA
|
GO_REF:0000033 MGI:109244 (PMID:15330859) GO_REF:0000107
|
GO_Central RGD Ensembl |
PMID:15330859 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:118,621,961...118,647,491
Ensembl chr 8:118,623,040...118,647,489
|
|
| G
|
Plxnb2
|
plexin B2
|
involved_in acts_upstream_of_or_within
|
IBA ISO IEA
|
GO_REF:0000033 MGI:109244 (PMID:15330859) GO_REF:0000107
|
GO_Central RGD Ensembl |
PMID:15330859 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:122,111,917...122,138,201
Ensembl chr 7:122,111,917...122,127,746
|
|
| G
|
Plxnb3
|
plexin B3
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:156,645,505...156,660,011
Ensembl chr X:156,645,182...156,660,003
|
|
| G
|
Plxnc1
|
plexin C1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:31,276,978...31,430,823
Ensembl chr 7:31,276,978...31,431,092
|
|
| G
|
Plxnd1
|
plexin D1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:150,675,377...150,715,706
Ensembl chr 4:150,675,377...150,715,566
|
|
| G
|
Robo1
|
roundabout guidance receptor 1
|
involved_in
|
ISO IEA
|
(PMID:12504588) GO_REF:0000107
|
RGD Ensembl |
PMID:12504588 |
GO_REF:0000107 |
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:24,067,878...25,108,694
|
|
| G
|
Robo2
|
roundabout guidance receptor 2
|
involved_in
|
ISO
|
(PMID:12504588)
|
RGD |
PMID:12504588 |
|
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:26,015,919...26,876,185
|
|
| G
|
Rpl4
|
ribosomal protein L4
|
|
IMP
|
|
RGD |
PMID:10964612 |
RGD:11039443 |
NCBI chr 8:73,566,477...73,571,600
Ensembl chr 8:73,566,466...73,571,788
|
|
| G
|
Rufy3
|
RUN and FYVE domain containing 3
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24720729)
|
RGD |
PMID:24720729 |
|
NCBI chr14:19,715,593...19,790,530
Ensembl chr14:19,715,593...19,790,608
|
|
| G
|
Sema4d
|
semaphorin 4D
|
acts_upstream_of_or_within involved_in
|
IEA ISO
|
GO_REF:0000107 MGI:2154238|MGI:2154239|MGI:97321|MGI:97383 (PMID:15330859) GO_REF:0000117
|
Ensembl RGD UniProt |
PMID:15330859 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr17:13,582,085...13,688,889
Ensembl chr17:13,582,098...13,688,891
|
|
| G
|
Shox2
|
SHOX homeobox 2
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:21156168)
|
Ensembl RGD |
PMID:21156168 |
GO_REF:0000107 |
NCBI chr 2:153,524,324...153,537,571
Ensembl chr 2:153,527,571...153,537,161
|
|
| G
|
Skil
|
SKI-like proto-oncogene
|
involved_in
|
IMP ISO
|
(PMID:16675394)
|
RGD |
PMID:16675394 PMID:19339625 |
RGD:2308917 |
NCBI chr 2:114,175,534...114,203,663
Ensembl chr 2:114,175,534...114,201,974
|
|
| G
|
Slitrk1
|
SLIT and NTRK-like family, member 1
|
involved_in
|
ISO
|
(PMID:23990902)
|
RGD |
PMID:23990902 |
|
NCBI chr15:92,137,703...92,141,741
Ensembl chr15:92,135,994...92,142,105
|
|
| G
|
Snap91
|
synaptosome associated protein 91
|
involved_in
|
IMP IEA
|
GO_REF:0000117
|
UniProt RGD |
PMID:18842885 |
GO_REF:0000117, RGD:8554167 |
NCBI chr 8:96,618,039...96,732,763
Ensembl chr 8:96,618,041...96,732,507
|
|
| G
|
Stk11
|
serine/threonine kinase 11
|
acts_upstream_of_or_within
|
ISO
|
MGI:1891699 (PMID:21111240)
|
RGD |
PMID:21111240 |
|
NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:10,225,204...10,241,965
|
|
| G
|
Stk25
|
serine/threonine kinase 25
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:108554|MGI:1341870 (PMID:21111240)
|
Ensembl RGD |
PMID:21111240 |
GO_REF:0000107 |
NCBI chr 9:101,609,218...101,621,458
Ensembl chr 9:101,609,221...101,621,359
|
|
| G
|
Tiam1
|
TIAM Rac1 associated GEF 1
|
acts_upstream_of_or_within involved_in
|
IMP ISO IBA
|
(PMID:14988728) GO_REF:0000033
|
RGD GO_Central |
PMID:14988728 PMID:11264310 |
GO_REF:0000033, RGD:10043321 |
NCBI chr11:42,517,527...42,866,280
Ensembl chr11:42,517,528...42,646,075
|
|
| G
|
Tiam2
|
TIAM Rac1 associated GEF 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:46,323,450...46,524,769
Ensembl chr 1:46,323,456...46,524,769
|
|
| G
|
Trak1
|
trafficking kinesin protein 1
|
|
IMP
|
|
RGD |
PMID:23395375 |
RGD:13208834 |
NCBI chr 8:129,861,967...130,016,870
Ensembl chr 8:129,861,977...130,016,870
|
|
| G
|
Zeb2
|
zinc finger E-box binding homeobox 2
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:2387499|MGI:2668659 (PMID:25741725)
|
Ensembl RGD |
PMID:25741725 |
GO_REF:0000107 |
NCBI chr 3:49,624,028...49,754,323
Ensembl chr 3:49,624,028...49,754,323
|
|
|
|
| G
|
Bcl11a
|
BCL11 transcription factor A
|
involved_in
|
ISO
|
(PMID:19616629)
|
RGD |
PMID:19616629 |
|
NCBI chr14:102,230,147...102,325,289
Ensembl chr14:102,231,113...102,325,623
|
|
| G
|
Bdnf
|
brain-derived neurotrophic factor
|
involved_in acts_upstream_of_or_within
|
ISO IEA
|
(PMID:19036963) (PMID:24573299) GO_REF:0000107
|
RGD Ensembl |
PMID:19036963 PMID:24573299 |
GO_REF:0000107 |
NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:116,619,633...116,670,657
|
|
| G
|
Crabp2
|
cellular retinoic acid binding protein 2
|
acts_upstream_of_or_within
|
ISO
|
(PMID:18052984)
|
RGD |
PMID:18052984 |
|
NCBI chr 2:175,714,862...175,719,208
Ensembl chr 2:175,707,312...175,728,385
|
|
| G
|
Dcx
|
doublecortin
|
|
IMP
|
|
RGD |
PMID:19726658 |
RGD:12904759 |
NCBI chr X:112,227,455...112,370,291
Ensembl chr X:112,227,455...112,304,161
|
|
| G
|
Efna5
|
ephrin A5
|
involved_in
|
ISO
|
(PMID:19036963)
|
RGD |
PMID:19036963 |
|
NCBI chr 9:109,763,786...110,042,396
Ensembl chr 9:109,767,252...110,042,348
|
|
| G
|
Ist1
|
IST1 factor associated with ESCRT-III
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:2139806 (PMID:22619377)
|
Ensembl RGD |
PMID:22619377 |
GO_REF:0000107 |
NCBI chr19:54,558,353...54,580,551
Ensembl chr19:54,558,353...54,580,491
|
|
| G
|
Lpar3
|
lysophosphatidic acid receptor 3
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:22465231)
|
Ensembl RGD |
PMID:22465231 |
GO_REF:0000107 |
NCBI chr 2:237,785,371...237,854,199
Ensembl chr 2:237,787,766...237,854,197
|
|
| G
|
Ngf
|
nerve growth factor
|
acts_upstream_of_or_within
|
ISO
|
(PMID:18052984)
|
RGD |
PMID:18052984 |
|
NCBI chr 2:192,589,580...192,642,971
Ensembl chr 2:192,589,582...192,643,834
|
|
| G
|
Rnd2
|
Rho family GTPase 2
|
acts_upstream_of_or_within
|
ISO
|
(PMID:22465231)
|
RGD |
PMID:22465231 |
|
NCBI chr10:86,899,395...86,902,992
Ensembl chr10:86,899,395...86,902,992
|
|
| G
|
Sema4d
|
semaphorin 4D
|
involved_in
|
ISO IEA
|
(PMID:19788569) GO_REF:0000107
|
RGD Ensembl |
PMID:19788569 |
GO_REF:0000107 |
NCBI chr17:13,582,085...13,688,889
Ensembl chr17:13,582,098...13,688,891
|
|
|
|
| G
|
Wnt3
|
Wnt family member 3
|
acts_upstream_of_or_within
|
ISO
|
(PMID:18716223)
|
RGD |
PMID:18716223 |
|
NCBI chr10:89,180,224...89,224,195
Ensembl chr10:89,216,801...89,224,195
|
|
| G
|
Wnt3a
|
Wnt family member 3A
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:18716223)
|
Ensembl RGD |
PMID:18716223 |
GO_REF:0000107 |
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,533,734...44,577,919
|
|
|
|
| G
|
Lrp1
|
LDL receptor related protein 1
|
|
IDA
|
|
RGD |
PMID:23867460 |
RGD:13800520 |
NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:65,265,639...65,346,196
|
|
| G
|
Rtn4
|
reticulon 4
|
acts_upstream_of_or_within
|
ISO
|
MGI:3623522 (PMID:12718855)
|
RGD |
PMID:12718855 |
|
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:107,650,732...107,698,611
|
|
|
|
| G
|
Ache
|
acetylcholinesterase
|
|
IMP
|
|
RGD |
PMID:12799140 |
RGD:1299197 |
NCBI chr12:25,042,882...25,050,608
Ensembl chr12:25,043,461...25,050,410
|
|
| G
|
Actr3
|
actin related protein 3
|
|
IMP
|
|
RGD |
PMID:18430734 |
RGD:2306201 |
NCBI chr13:39,353,413...39,396,509
Ensembl chr13:39,353,079...39,396,711
|
|
| G
|
Afdn
|
afadin, adherens junction formation factor
|
|
IMP
|
|
RGD |
PMID:22948147 |
RGD:13838731 |
NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:58,041,641...58,170,505
|
|
| G
|
Akap5
|
A-kinase anchoring protein 5
|
|
IMP
|
|
RGD |
PMID:19535604 |
RGD:2313144 |
NCBI chr 6:100,787,169...100,796,712
Ensembl chr 6:100,790,148...100,796,620
|
|
| G
|
Anapc2
|
anaphase promoting complex subunit 2
|
|
IMP
|
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr 3:28,484,590...28,496,338
Ensembl chr 3:28,484,614...28,496,337
|
|
| G
|
Ankrd27
|
ankyrin repeat domain 27
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:22171327)
|
Ensembl RGD |
PMID:22171327 |
GO_REF:0000107 |
NCBI chr 1:97,387,997...97,440,501
Ensembl chr 1:97,388,099...97,440,501
|
|
| G
|
Caprin1
|
cell cycle associated protein 1
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:20516077) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:20516077 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:110,606,489...110,685,562
|
|
| G
|
Caprin2
|
caprin family member 2
|
involved_in
|
ISO
|
(PMID:20516077)
|
RGD |
PMID:20516077 |
|
NCBI chr 4:183,537,935...183,592,162
Ensembl chr 4:183,537,430...183,592,809
|
|
| G
|
Cdkl3
|
cyclin-dependent kinase-like 3
|
acts_upstream_of_or_within involved_in
|
IMP ISO IEA IBA
|
PMID:20347982 (PMID:20347982) GO_REF:0000117 GO_REF:0000033
|
RGD UniProt GO_Central |
PMID:20347982 PMID:20347982 |
GO_REF:0000033 GO_REF:0000117, RGD:8693354 |
NCBI chr10:36,755,413...36,850,197
Ensembl chr10:36,764,377...36,878,660
|
|
| G
|
Cdkl5
|
cyclin-dependent kinase-like 5
|
involved_in
|
IMP
|
PMID:20861382
|
BHF-UCL |
PMID:20861382 |
RGD:8554575 |
NCBI chr X:37,566,320...37,796,766
Ensembl chr X:37,566,378...37,796,760
|
|
| G
|
Cul7
|
cullin 7
|
involved_in
|
ISO IMP
|
UniProtKB:D3ZEF4 (PMID:21572988)
|
RGD |
PMID:21572988 PMID:21572988 |
RGD:8554449 |
NCBI chr 9:21,816,703...21,830,344
Ensembl chr 9:21,816,703...21,830,344
|
|
| G
|
Cux1
|
cut-like homeobox 1
|
involved_in
|
ISO
|
(PMID:20510857)
|
RGD |
PMID:20510857 |
|
NCBI chr12:25,728,393...26,062,497
Ensembl chr12:25,743,733...26,062,497
|
|
| G
|
Cux2
|
cut-like homeobox 2
|
involved_in
|
ISO
|
(PMID:20510857)
|
RGD |
PMID:20510857 |
|
NCBI chr12:40,168,402...40,368,303
Ensembl chr12:40,149,292...40,366,528
|
|
| G
|
Dlg4
|
discs large MAGUK scaffold protein 4
|
|
IMP
|
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr10:55,239,397...55,267,780
Ensembl chr10:55,236,869...55,265,839
|
|
| G
|
Epha4
|
Eph receptor A4
|
|
IMP
|
|
RGD |
PMID:19414612 |
RGD:5688776 |
NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:86,263,982...86,406,755
|
|
| G
|
Fbxo31
|
F-box protein 31
|
involved_in
|
IMP
|
PMID:23469015
|
CACAO |
PMID:23469015 |
RGD:10047221 |
NCBI chr19:66,533,437...66,564,674
Ensembl chr19:66,533,437...66,564,674
|
|
| G
|
Fbxw8
|
F-box and WD repeat domain containing 8
|
involved_in
|
ISO IEA IMP
|
(PMID:21572988) GO_REF:0000107
|
RGD Ensembl |
PMID:21572988 PMID:21572988 |
GO_REF:0000107, RGD:8554449 |
NCBI chr12:44,087,375...44,177,985
Ensembl chr12:44,087,375...44,177,985
|
|
| G
|
Fzd4
|
frizzled class receptor 4
|
|
IMP
|
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr 1:152,692,507...152,701,372
Ensembl chr 1:152,692,507...152,701,372
|
|
| G
|
Grip1
|
glutamate receptor interacting protein 1
|
|
IMP
|
|
RGD |
PMID:15965473 PMID:25424568 |
RGD:127285651, RGD:11060597 |
NCBI chr 7:56,820,501...57,477,877
Ensembl chr 7:56,820,704...57,468,417
|
|
| G
|
Hdac6
|
histone deacetylase 6
|
|
IMP
|
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr X:17,222,538...17,244,373
Ensembl chr X:17,222,856...17,244,370
|
|
| G
|
Il1rapl1
|
interleukin 1 receptor accessory protein-like 1
|
involved_in
|
ISO
|
(PMID:21940441)
|
RGD |
PMID:21940441 |
|
NCBI chr X:55,322,779...56,827,486
Ensembl chr X:55,328,964...56,826,613
|
|
| G
|
Ilk
|
integrin-linked kinase
|
|
IMP
|
inhibition in the nucleus accumbens decreases dendrite density of medium spiny neurons neuronal depolarization-induced dendrite initiation and growth
|
RGD |
PMID:18602949 PMID:17182785 |
RGD:2301736, RGD:2301767 |
NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:169,498,681...169,506,964
|
|
| G
|
Met
|
MET proto-oncogene, receptor tyrosine kinase
|
|
IMP
|
|
RGD |
PMID:18262389 |
RGD:2317458 |
NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821
|
|
| G
|
Myo5b
|
myosin Vb
|
|
IMP
|
|
RGD |
PMID:23554492 |
RGD:11533644 |
NCBI chr18:70,313,717...70,613,918
Ensembl chr18:70,311,990...70,613,918
|
|
| G
|
Numb
|
NUMB, endocytic adaptor protein
|
|
IMP
|
|
RGD |
PMID:16394100 |
RGD:2302413 |
NCBI chr 6:109,162,499...109,284,527
Ensembl chr 6:109,162,499...109,284,463
|
|
| G
|
Numbl
|
NUMB-like, endocytic adaptor protein
|
|
IMP
|
|
RGD |
PMID:16394100 |
RGD:2302413 |
NCBI chr 1:91,677,437...91,701,415
Ensembl chr 1:91,677,242...91,701,424
|
|
| G
|
Obsl1
|
obscurin like cytoskeletal adaptor 1
|
involved_in
|
ISO IEA IMP
|
(PMID:21572988) GO_REF:0000117 GO_REF:0000107
|
RGD UniProt Ensembl |
PMID:21572988 PMID:21572988 |
GO_REF:0000107 GO_REF:0000117, RGD:8554449 |
NCBI chr 9:84,416,447...84,442,415
Ensembl chr 9:84,416,240...84,442,415
|
|
| G
|
Parp6
|
poly (ADP-ribose) polymerase family, member 6
|
|
IMP
|
|
RGD |
PMID:26725726 |
RGD:11571888 |
NCBI chr 8:68,912,393...68,944,904
Ensembl chr 8:68,917,388...68,944,898
|
|
| G
|
Pias2
|
protein inhibitor of activated STAT, 2
|
|
IMP
|
|
RGD |
PMID:17855618 |
RGD:2298751 |
NCBI chr18:72,883,008...72,989,486
Ensembl chr18:72,882,890...73,006,662
|
|
| G
|
Ptprd
|
protein tyrosine phosphatase, receptor type, D
|
involved_in
|
ISO
|
(PMID:21940441)
|
RGD |
PMID:21940441 |
|
NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
|
|
| G
|
Ptprf
|
protein tyrosine phosphatase, receptor type, F
|
|
IMP
|
|
RGD |
PMID:15750591 |
RGD:1642736 |
NCBI chr 5:137,027,376...137,109,405
Ensembl chr 5:137,028,164...137,095,426
|
|
| G
|
Rab21
|
RAB21, member RAS oncogene family
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:22171327)
|
Ensembl RGD |
PMID:22171327 |
GO_REF:0000107 |
NCBI chr 7:52,790,158...52,814,943
Ensembl chr 7:52,790,165...52,814,943
|
|
| G
|
Sgk1
|
serum/glucocorticoid regulated kinase 1
|
|
IMP
|
|
RGD |
PMID:16049181 |
RGD:1642773 |
NCBI chr 1:24,799,391...24,916,886
Ensembl chr 1:24,799,396...24,807,231
|
|
| G
|
Sh3glb1
|
SH3 domain -containing GRB2-like endophilin B1
|
|
IMP
|
|
RGD |
PMID:18768694 |
RGD:13504749 |
NCBI chr 2:236,411,194...236,445,225
Ensembl chr 2:236,410,436...236,445,140
|
|
| G
|
Smad1
|
SMAD family member 1
|
|
IEP
|
|
RGD |
PMID:15056710 |
RGD:1643236 |
NCBI chr19:45,417,430...45,477,962
Ensembl chr19:45,417,433...45,477,957
|
|
| G
|
Ss18l1
|
SS18L1 subunit of BAF chromatin remodeling complex
|
involved_in acts_upstream_of_or_within
|
IBA ISO IEA
|
GO_REF:0000033 (PMID:23785148) GO_REF:0000107
|
GO_Central RGD Ensembl |
PMID:23785148 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:187,521,616...187,542,873
Ensembl chr 3:187,521,318...187,542,872
|
|
| G
|
Tbc1d24
|
TBC1 domain family, member 24
|
|
IMP
|
|
RGD |
PMID:24469796 |
RGD:11537391 |
NCBI chr10:13,711,930...13,740,902
Ensembl chr10:13,714,833...13,740,473
|
|
| G
|
Vamp7
|
vesicle-associated membrane protein 7
|
involved_in
|
ISO
|
(PMID:22171327)
|
RGD |
PMID:22171327 |
|
NCBI chr12:21,842,206...21,958,556
Ensembl chr12:21,842,228...21,958,552
|
|
| G
|
Wls
|
Wnt ligand secretion mediator
|
|
IMP
|
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr 2:251,590,653...251,705,991
Ensembl chr 2:251,590,614...251,706,380
|
|
| G
|
Wnt5a
|
Wnt family member 5A
|
|
IMP
|
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860
|
|
|
|
| G
|
Actr2
|
actin related protein 2
|
|
IMP
|
|
RGD |
PMID:23441206 |
RGD:11530033 |
NCBI chr14:98,500,119...98,535,092
Ensembl chr14:98,500,138...98,541,998
|
|
| G
|
Actr3
|
actin related protein 3
|
|
IMP
|
|
RGD |
PMID:23441206 |
RGD:11530033 |
NCBI chr13:39,353,413...39,396,509
Ensembl chr13:39,353,079...39,396,711
|
|
| G
|
Afdn
|
afadin, adherens junction formation factor
|
|
IMP
|
|
RGD |
PMID:22948147 |
RGD:13838731 |
NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:58,041,641...58,170,505
|
|
| G
|
Baiap2
|
BAR/IMD domain containing adaptor protein 2
|
|
IMP
|
|
RGD |
PMID:15673667 |
RGD:9684988 |
NCBI chr10:105,721,371...105,788,549
Ensembl chr10:105,721,417...105,788,549
|
|
| G
|
Camk2b
|
calcium/calmodulin-dependent protein kinase II beta
|
involved_in
|
IMP
|
PMID:12873385
|
UniProt |
PMID:12873385 |
RGD:8553829 |
NCBI chr14:85,059,166...85,148,121
Ensembl chr14:85,059,191...85,148,485
|
|
| G
|
Caprin1
|
cell cycle associated protein 1
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:20516077) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:20516077 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:110,606,489...110,685,562
|
|
| G
|
Caprin2
|
caprin family member 2
|
involved_in
|
ISO
|
(PMID:20516077)
|
RGD |
PMID:20516077 |
|
NCBI chr 4:183,537,935...183,592,162
Ensembl chr 4:183,537,430...183,592,809
|
|
| G
|
Cask
|
calcium/calmodulin dependent serine protein kinase
|
|
IMP
|
|
RGD |
PMID:18606847 |
RGD:11576294 |
NCBI chr X:11,572,328...11,915,831
Ensembl chr X:11,572,636...11,911,948
|
|
| G
|
Cux2
|
cut-like homeobox 2
|
involved_in
|
ISO
|
(PMID:20510857)
|
RGD |
PMID:20510857 |
|
NCBI chr12:40,168,402...40,368,303
Ensembl chr12:40,149,292...40,366,528
|
|
| G
|
Dbn1
|
drebrin 1
|
involved_in
|
IMP ISO IEA IBA ISS
|
(PMID:25865831) GO_REF:0000117 GO_REF:0000033 GO_REF:0000024 GO_REF:0000107
|
RGD UniProt GO_Central Ensembl |
PMID:25865831 PMID:19174472 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:10398809 |
NCBI chr17:9,155,729...9,170,121
Ensembl chr17:9,155,787...9,170,122
|
|
| G
|
Dbnl
|
drebrin-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:84,880,085...84,895,122
Ensembl chr14:84,880,142...84,897,133
|
|
| G
|
Dhx36
|
DEAH-box helicase 36
|
involved_in
|
IMP
|
PMID:23651854
|
UniProt |
PMID:23651854 |
RGD:13792545 |
NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:149,006,089...149,044,191
|
|
| G
|
Dnm1l
|
dynamin 1-like
|
|
IMP
|
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr11:98,084,049...98,135,663
Ensembl chr11:98,085,397...98,137,420
|
|
| G
|
Eef2k
|
eukaryotic elongation factor-2 kinase
|
|
IMP
|
|
RGD |
PMID:20427644 |
RGD:10401235 |
NCBI chr 1:184,824,420...184,888,048
Ensembl chr 1:184,824,420...184,888,048
|
|
| G
|
Ephb2
|
Eph receptor B2
|
|
IMP
|
|
RGD |
PMID:21364901 |
RGD:127285794 |
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
|
|
| G
|
Gprasp3
|
G protein-coupled receptor associated sorting protein family member 3
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:21199326)
|
Ensembl RGD |
PMID:21199326 |
GO_REF:0000107 |
NCBI chr X:103,639,366...103,644,561
Ensembl chr X:103,609,243...103,650,463
|
|
| G
|
Il1rapl1
|
interleukin 1 receptor accessory protein-like 1
|
involved_in
|
ISO
|
(PMID:21940441)
|
RGD |
PMID:21940441 |
|
NCBI chr X:55,322,779...56,827,486
Ensembl chr X:55,328,964...56,826,613
|
|
| G
|
Itpka
|
inositol-trisphosphate 3-kinase A
|
acts_upstream_of_or_within
|
IMP
|
PMID:19890013
|
MGI |
PMID:19890013 |
RGD:8553536 |
NCBI chr 3:127,179,841...127,188,405
Ensembl chr 3:127,179,808...127,188,414
|
|
| G
|
Kalrn
|
kalirin, RhoGEF kinase
|
acts_upstream_of_or_within
|
ISO
|
MGI:4358076 (PMID:19625617)
|
RGD |
PMID:19625617 |
|
NCBI chr11:79,703,345...80,309,210
Ensembl chr11:79,703,366...80,133,329
|
|
| G
|
Lrp8
|
LDL receptor related protein 8
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:21852430)
|
Ensembl RGD |
PMID:21852430 |
GO_REF:0000107 |
NCBI chr 5:127,792,236...127,864,207
Ensembl chr 5:127,792,299...127,864,207
|
|
| G
|
Mapre3
|
microtubule-associated protein, RP/EB family, member 3
|
|
IDA
|
|
RGD |
PMID:31092585 |
RGD:597538596 |
NCBI chr 6:31,233,736...31,278,626
Ensembl chr 6:31,233,736...31,278,775
|
|
| G
|
Marcks
|
myristoylated alanine rich protein kinase C substrate
|
|
IMP
|
|
RGD |
PMID:16202710 |
RGD:9685333 |
NCBI chr20:42,240,185...42,245,882
Ensembl chr20:42,240,185...42,245,882
|
|
| G
|
Mfn1
|
mitofusin 1
|
involved_in
|
IMP IEA
|
GO_REF:0000117
|
UniProt RGD |
PMID:19605646 |
GO_REF:0000117, RGD:7800727 |
NCBI chr 2:117,240,525...117,288,017
Ensembl chr 2:117,241,759...117,290,190
|
|
| G
|
Mfn2
|
mitofusin 2
|
involved_in
|
IMP IEA
|
GO_REF:0000117
|
UniProt RGD |
PMID:19605646 |
GO_REF:0000117, RGD:7800727 |
NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:163,587,463...163,618,495
|
|
| G
|
Opa1
|
OPA1, mitochondrial dynamin like GTPase
|
|
IMP
|
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr11:84,612,943...84,690,025
Ensembl chr11:84,615,340...84,689,955
|
|
| G
|
Pafah1b1
|
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:23483716)
|
Ensembl RGD |
PMID:23483716 |
GO_REF:0000107 |
NCBI chr10:60,031,441...60,090,259
Ensembl chr10:60,032,514...60,090,196
|
|
| G
|
Pak3
|
p21 (RAC1) activated kinase 3
|
|
IMP
|
|
RGD |
PMID:18481281 |
RGD:7775053 |
NCBI chr X:111,912,967...112,171,037
Ensembl chr X:111,913,059...112,165,035
|
|
| G
|
Ptprd
|
protein tyrosine phosphatase, receptor type, D
|
involved_in
|
ISO
|
(PMID:21940441)
|
RGD |
PMID:21940441 |
|
NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
|
|
| G
|
Reln
|
reelin
|
involved_in
|
ISO
|
(PMID:21664258), (PMID:21852430)
|
RGD |
PMID:21664258 PMID:21852430 |
|
NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:13,628,399...14,055,162
|
|
| G
|
Slc30a1
|
solute carrier family 30 member 1
|
|
IMP
|
|
RGD |
PMID:25319628 |
RGD:11057402 |
NCBI chr13:106,022,019...106,025,892
Ensembl chr13:106,022,019...106,025,892
|
|
| G
|
Srcin1
|
SRC kinase signaling inhibitor 1
|
|
IDA
|
|
RGD |
PMID:31092585 |
RGD:597538596 |
NCBI chr10:82,999,295...83,066,359
Ensembl chr10:82,991,033...83,067,419
|
|
| G
|
Stau2
|
staufen double-stranded RNA binding protein 2
|
|
IMP
|
|
RGD |
PMID:16418534 |
RGD:10043163 |
NCBI chr 5:7,623,528...7,868,206
Ensembl chr 5:7,624,019...7,868,204
|
|
| G
|
Tiam1
|
TIAM Rac1 associated GEF 1
|
|
IMP
|
|
RGD |
PMID:16474385 |
RGD:10043325 |
NCBI chr11:42,517,527...42,866,280
Ensembl chr11:42,517,528...42,646,075
|
|
|
|
| G
|
Hes1
|
hes family bHLH transcription factor 1
|
|
IMP
|
|
RGD |
PMID:10839357 |
RGD:704354 |
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061
|
|
| G
|
Il1b
|
interleukin 1 beta
|
|
IDA
|
|
RGD |
PMID:23168994 |
RGD:7175538 |
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
|
|
| G
|
Nkx6-1
|
NK6 homeobox 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:1352738 (PMID:15629702)
|
RGD |
PMID:15629702 |
|
NCBI chr14:8,274,238...8,281,171
Ensembl chr14:8,274,238...8,281,163
|
|
| G
|
Nkx6-2
|
NK6 homeobox 2
|
acts_upstream_of_or_within
|
ISO
|
MGI:1206039 (PMID:15629702)
|
RGD |
PMID:15629702 |
|
NCBI chr 1:203,811,582...203,813,122
Ensembl chr 1:203,811,582...203,813,122
|
|
| G
|
Notch1
|
notch receptor 1
|
|
IMP
|
|
RGD |
PMID:12853432 |
RGD:1358543 |
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613
|
|
| G
|
Ntf3
|
neurotrophin 3
|
|
IDA
|
|
RGD |
PMID:15139015 |
RGD:1358328 |
NCBI chr 4:160,601,161...160,670,623
Ensembl chr 4:160,600,770...160,676,349
|
|
| G
|
Rnf112
|
ring finger protein 112
|
acts_upstream_of_or_within
|
ISO
|
(PMID:21566658)
|
RGD |
PMID:21566658 |
|
NCBI chr10:46,620,602...46,655,745
Ensembl chr10:46,620,602...46,627,528
|
|
| G
|
Rtn4
|
reticulon 4
|
|
IDA
|
|
RGD |
PMID:19379790 |
RGD:2314929 |
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:107,650,732...107,698,611
|
|
| G
|
Spint1
|
serine peptidase inhibitor, Kunitz type 1
|
|
IMP
|
|
RGD |
PMID:23409135 |
RGD:10043095 |
NCBI chr 3:126,685,017...126,697,957
Ensembl chr 3:126,685,422...126,697,956
|
|
|
|
| G
|
Arrb2
|
arrestin, beta 2
|
|
IMP
|
|
RGD |
PMID:19014370 |
RGD:401938609 |
NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,645,357...55,653,487
|
|
| G
|
Atxn1
|
ataxin 1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:20531390)
|
RGD |
PMID:20531390 |
|
NCBI chr17:18,943,397...19,354,751
Ensembl chr17:19,208,200...19,356,790
|
|
| G
|
Cysltr1
|
cysteinyl leukotriene receptor 1
|
|
IMP
|
|
RGD |
PMID:17910051 |
RGD:5144007 |
NCBI chr X:75,734,281...75,762,873
Ensembl chr X:75,734,270...75,763,050
|
|
| G
|
E2f1
|
E2F transcription factor 1
|
|
IMP
|
|
RGD |
PMID:21637599 |
RGD:13702469 |
NCBI chr 3:163,524,739...163,535,563
Ensembl chr 3:163,524,739...163,535,563
|
|
| G
|
Egfr
|
epidermal growth factor receptor
|
|
IMP
|
|
RGD |
PMID:10616092 |
RGD:38599219 |
NCBI chr14:95,378,626...95,551,358
Ensembl chr14:95,378,626...95,551,358
|
|
| G
|
Etv5
|
ETS variant transcription factor 5
|
|
IMP
|
|
RGD |
PMID:12297104 |
RGD:2316288 |
NCBI chr11:92,113,171...92,170,758
Ensembl chr11:92,113,224...92,170,767
|
|
| G
|
Flt1
|
Fms related receptor tyrosine kinase 1
|
|
IMP
|
|
RGD |
PMID:18482723 |
RGD:10402148 |
NCBI chr12:12,333,050...12,504,750
Ensembl chr12:12,333,430...12,504,750
|
|
| G
|
Gfap
|
glial fibrillary acidic protein
|
|
IMP
|
|
RGD |
PMID:21250919 |
RGD:6480511 |
NCBI chr10:88,352,987...88,361,661
Ensembl chr10:88,352,986...88,361,685
|
|
| G
|
Igf1
|
insulin-like growth factor 1
|
|
IDA
|
|
RGD |
PMID:24262632 |
RGD:12904964 |
NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:24,130,137...24,246,764
|
|
| G
|
Il1b
|
interleukin 1 beta
|
involved_in
|
ISO
|
UniProtKB:P01375 (PMID:1752215)
|
RGD |
PMID:1752215 |
|
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
|
|
| G
|
Il6
|
interleukin 6
|
involved_in
|
ISO
|
(PMID:2104886)
|
RGD |
PMID:2104886 |
|
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
|
|
| G
|
Kras
|
KRAS proto-oncogene, GTPase
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
|
|
| G
|
Lta
|
lymphotoxin alpha
|
|
IMP
|
|
RGD |
PMID:11595667 |
RGD:8548857 |
NCBI chr20:3,622,291...3,625,852
Ensembl chr20:3,623,527...3,625,533
|
|
| G
|
Lyn
|
LYN proto-oncogene, Src family tyrosine kinase
|
|
IDA
|
|
RGD |
PMID:15504915 |
RGD:2303714 |
NCBI chr 5:21,437,127...21,553,097
Ensembl chr 5:21,437,084...21,554,461
|
|
| G
|
Mecp2
|
methyl CpG binding protein 2
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr X:156,932,481...156,995,981
Ensembl chr X:156,941,234...156,943,560
|
|
| G
|
Mir125b1
|
microRNA 125b-1
|
involved_in
|
ISO
|
(PMID:20347935)
|
RGD |
PMID:20347935 |
|
NCBI chr 8:50,850,036...50,850,122
Ensembl chr 8:50,850,036...50,850,122
|
|
| G
|
Mir125b2
|
microRNA 125b-2
|
involved_in
|
ISO
|
(PMID:20347935)
|
RGD |
PMID:20347935 |
|
NCBI chr11:29,732,572...29,732,659
|
|
| G
|
Mtor
|
mechanistic target of rapamycin kinase
|
|
IMP
|
|
RGD |
PMID:19576187 |
RGD:10041012 |
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435
|
|
| G
|
Myb
|
MYB proto-oncogene, transcription factor
|
|
IMP
|
|
RGD |
PMID:12599418 |
RGD:11532679 |
NCBI chr 1:17,759,309...17,793,306
Ensembl chr 1:17,759,309...17,792,547
|
|
| G
|
Myc
|
MYC proto-oncogene, bHLH transcription factor
|
|
IMP
|
|
RGD |
PMID:9316053 |
RGD:10059624 |
NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:95,483,105...95,488,028
|
|
| G
|
Plag1
|
PLAG1 zinc finger
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:19808959)
|
Ensembl RGD |
PMID:19808959 |
GO_REF:0000107 |
NCBI chr 5:21,699,650...21,754,325
Ensembl chr 5:21,702,987...21,711,240
|
|
| G
|
Ppp1cc
|
protein phosphatase 1 catalytic subunit gamma
|
|
IMP
|
|
RGD |
PMID:29033188 |
RGD:13514047 |
NCBI chr12:40,043,822...40,061,301
Ensembl chr12:40,043,822...40,061,341
|
|
| G
|
Prkch
|
protein kinase C, eta
|
involved_in
|
ISO IEA ISS
|
(PMID:10806212) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:10806212 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:98,027,830...98,226,486
Ensembl chr 6:98,027,646...98,226,477
|
|
| G
|
Prkci
|
protein kinase C, iota
|
involved_in
|
ISO IEA ISS
|
(PMID:21419810) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:21419810 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:114,250,398...114,310,784
Ensembl chr 2:114,250,398...114,310,784
|
|
| G
|
Ptk2
|
protein tyrosine kinase 2
|
|
IMP
|
|
RGD |
PMID:12838510 |
RGD:2292612 |
NCBI chr 7:107,015,730...107,220,865
Ensembl chr 7:107,015,733...107,172,091
|
|
| G
|
Slc7a5
|
solute carrier family 7 member 5
|
|
IMP
|
|
RGD |
PMID:16496379 |
RGD:151361115 |
NCBI chr19:66,843,808...66,872,412
Ensembl chr19:66,843,808...66,872,412
|
|
| G
|
Tnf
|
tumor necrosis factor
|
involved_in
|
ISO IEA
|
UniProtKB:P01584 (PMID:1752215), (PMID:2104886) GO_REF:0000107
|
RGD Ensembl |
PMID:1752215 PMID:2104886 |
GO_REF:0000107 |
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
|
|
| G
|
Tspo
|
translocator protein
|
|
IDA
|
|
RGD |
PMID:18190798 |
RGD:2317142 |
NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:116,600,210...116,610,460
|
|
| G
|
Ufl1
|
Ufm1-specific ligase 1
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:20531390)
|
Ensembl RGD |
PMID:20531390 |
GO_REF:0000107 |
NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:43,758,098...43,791,682
|
|
| G
|
Vegfc
|
vascular endothelial growth factor C
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr16:44,445,293...44,560,887
Ensembl chr16:44,445,293...44,560,887
|
|
| G
|
Vim
|
vimentin
|
|
IMP
|
|
RGD |
PMID:21250919 |
RGD:6480511 |
NCBI chr17:81,577,261...81,585,746
Ensembl chr17:81,568,272...81,585,746
|
|
|
|
| G
|
Il6
|
interleukin 6
|
involved_in
|
ISO
|
(PMID:26134658)
|
RGD |
PMID:26134658 |
|
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
|
|
| G
|
Sox10
|
SRY-box transcription factor 10
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:15572147)
|
Ensembl RGD |
PMID:15572147 |
GO_REF:0000107 |
NCBI chr 7:112,605,721...112,615,097
Ensembl chr 7:112,605,721...112,615,990
|
|
| G
|
Sox8
|
SRY-box transcription factor 8
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:15572147) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:15572147 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345
|
|
| G
|
Synj1
|
synaptojanin 1
|
|
IMP
|
|
RGD |
PMID:19282871 |
RGD:2312448 |
NCBI chr11:43,678,709...43,755,526
Ensembl chr11:43,678,709...43,755,526
|
|
|
|
| G
|
Bdnf
|
brain-derived neurotrophic factor
|
|
IMP
|
|
RGD |
PMID:14699417 |
RGD:4891114 |
NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:116,619,633...116,670,657
|
|
| G
|
Ephb2
|
Eph receptor B2
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:2149765 (PMID:11754836)
|
Ensembl RGD |
PMID:11754836 |
GO_REF:0000107 |
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
|
|
| G
|
Fmr1
|
fragile X messenger ribonucleoprotein 1
|
involved_in
|
IMP IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:28894415 |
GO_REF:0000033, RGD:38501107 |
NCBI chr X:152,284,857...152,322,686
Ensembl chr X:152,284,841...152,322,675
|
|
| G
|
Fxr1
|
FMR1 autosomal homolog 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:118,812,287...118,865,813
Ensembl chr 2:118,811,980...118,867,027
|
|
| G
|
Fxr2
|
FMR1 autosomal homolog 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:54,849,345...54,869,713
Ensembl chr10:54,849,267...54,869,713
|
|
| G
|
Grm5
|
glutamate metabotropic receptor 5
|
|
IDA
|
|
RGD |
PMID:12740378 |
RGD:731147 |
NCBI chr 1:150,722,711...151,297,585
Ensembl chr 1:150,733,678...151,296,649
|
|
| G
|
Kdr
|
kinase insert domain receptor
|
|
IMP
|
|
RGD |
PMID:18221855 |
RGD:2292019 |
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,572,049...32,615,192
|
|
| G
|
Kit
|
KIT proto-oncogene receptor tyrosine kinase
|
|
IMP
|
|
RGD |
PMID:11112797 |
RGD:2292520 |
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,903,033...32,978,812
|
|
| G
|
Neurl1
|
neuralized E3 ubiquitin protein ligase 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:22153079)
|
Ensembl RGD |
PMID:22153079 |
GO_REF:0000107 |
NCBI chr 1:256,008,012...256,094,219
Ensembl chr 1:256,008,160...256,094,224
|
|
| G
|
Nptn
|
neuroplastin
|
involved_in
|
IMP
|
PMID:10759566
|
HGNC-UCL |
PMID:10759566 |
RGD:8553916 |
NCBI chr 8:67,892,678...67,959,231
Ensembl chr 8:67,892,702...67,959,236
|
|
| G
|
Shank3
|
SH3 and multiple ankyrin repeat domains 3
|
involved_in
|
IEA ISO ISS
|
GO_REF:0000107 (PMID:21167025) GO_REF:0000024
|
Ensembl RGD BHF-UCL |
PMID:21167025 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:122,448,323...122,510,410
|
|
|
|
| G
|
Tgfb1
|
transforming growth factor, beta 1
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:29909984) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:29909984 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
|
|
|
|
| G
|
Aspm
|
assembly factor for spindle microtubules
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:88276 (PMID:21937711)
|
Ensembl RGD |
PMID:21937711 |
GO_REF:0000107 |
NCBI chr13:53,625,584...53,674,489
Ensembl chr13:53,625,584...53,674,489
|
|
| G
|
Bex1
|
brain expressed X-linked 1
|
acts_upstream_of_or_within
|
IDA
|
PMID:16498402
|
MGI |
PMID:16498402 |
RGD:8554704 |
NCBI chr X:104,010,639...104,012,143
Ensembl chr X:104,010,371...104,011,236
|
|
| G
|
Cdon
|
cell adhesion associated, oncogene regulated
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:42,032,921...42,119,451
Ensembl chr 8:42,033,042...42,119,345
|
|
| G
|
Ctf2
|
cardiotrophin 2
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:191,764,538...191,772,881
Ensembl chr 1:191,764,538...191,772,881
|
|
| G
|
Ctnnb1
|
catenin beta 1
|
involved_in acts_upstream_of_or_within
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:21325504) MGI:1334448 (PMID:21937711) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:21325504 PMID:21937711 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662
|
|
| G
|
Cx3cl1
|
C-X3-C motif chemokine ligand 1
|
|
IDA
|
|
RGD |
PMID:20018408 |
RGD:9491804 |
NCBI chr19:10,233,326...10,244,856
Ensembl chr19:10,233,329...10,242,999
|
|
| G
|
Cx3cr1
|
C-X3-C motif chemokine receptor 1
|
|
IMP
|
|
RGD |
PMID:20018408 |
RGD:9491804 |
NCBI chr 8:128,661,294...128,679,048
Ensembl chr 8:128,654,833...128,685,983
|
|
| G
|
Dct
|
dopachrome tautomerase
|
involved_in acts_upstream_of_or_within
|
IBA ISO IEA
|
GO_REF:0000033 (PMID:16857183) GO_REF:0000107
|
GO_Central RGD Ensembl |
PMID:16857183 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr15:101,469,159...101,508,029
Ensembl chr15:101,469,159...101,508,029
|
|
| G
|
Disc1
|
DISC1 scaffold protein
|
involved_in
|
ISO IEA
|
(PMID:19303846) GO_REF:0000107
|
RGD Ensembl |
PMID:19303846 |
GO_REF:0000107 |
NCBI chr19:69,911,548...70,120,970
Ensembl chr19:69,911,976...70,120,970
|
|
| G
|
Dmrta2
|
DMRT-like family A2
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:5527461 (PMID:23056351)
|
Ensembl RGD |
PMID:23056351 |
GO_REF:0000107 |
NCBI chr 5:130,034,473...130,040,283
Ensembl chr 5:130,034,473...130,040,222
|
|
| G
|
Drd2
|
dopamine receptor D2
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:17426594)
|
Ensembl RGD |
PMID:17426594 |
GO_REF:0000107 |
NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:58,605,403...58,669,339
|
|
| G
|
Fgf2
|
fibroblast growth factor 2
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:122,164,454...122,224,493
|
|
| G
|
Foxg1
|
forkhead box G1
|
acts_upstream_of_or_within
|
ISO
|
MGI:1932522 (PMID:15893304)
|
RGD |
PMID:15893304 |
|
NCBI chr 6:72,401,582...72,404,392
Ensembl chr 6:72,394,239...72,427,392
|
|
| G
|
Fzd3
|
frizzled class receptor 3
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:21325504)
|
Ensembl RGD |
PMID:21325504 |
GO_REF:0000107 |
NCBI chr15:43,596,962...43,664,047
Ensembl chr15:43,596,965...43,663,960
|
|
| G
|
Gli3
|
GLI family zinc finger 3
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:1856282 (PMID:20943929)
|
Ensembl RGD |
PMID:20943929 |
GO_REF:0000107 |
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:54,134,064...54,405,198
|
|
| G
|
Hif1a
|
hypoxia inducible factor 1 subunit alpha
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:103178 (PMID:17215402)
|
Ensembl RGD |
PMID:17215402 |
GO_REF:0000107 |
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:98,359,910...98,405,323
|
|
| G
|
Kdm1a
|
lysine demethylase 1A
|
involved_in
|
ISO IEA
|
(PMID:23400681) GO_REF:0000107
|
RGD Ensembl |
PMID:23400681 |
GO_REF:0000107 |
NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:154,065,543...154,121,775
|
|
| G
|
Mapk8
|
mitogen-activated protein kinase 8
|
|
IMP
|
|
RGD |
PMID:24388750 |
RGD:10047173 |
NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,645,198...8,728,427
|
|
| G
|
Notch1
|
notch receptor 1
|
|
IMP
|
|
RGD |
PMID:19109527 |
RGD:2325303 |
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613
|
|
| G
|
Nr2e1
|
nuclear receptor subfamily 2, group E, member 1
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr20:47,632,347...47,653,464
Ensembl chr20:47,632,347...47,653,464
|
|
| G
|
Otp
|
orthopedia homeobox
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:2180541 (PMID:10557207)
|
Ensembl RGD |
PMID:10557207 |
GO_REF:0000107 |
NCBI chr 2:27,842,892...27,851,093
Ensembl chr 2:27,842,897...27,851,093
|
|
| G
|
Pax6
|
paired box 6
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:18287938)
|
Ensembl RGD |
PMID:18287938 |
GO_REF:0000107 |
NCBI chr 3:112,590,034...112,611,771
Ensembl chr 3:112,590,391...112,611,763
|
|
| G
|
Shh
|
sonic hedgehog signaling molecule
|
acts_upstream_of_or_within
|
IMP ISO IEA
|
(PMID:11748155) GO_REF:0000107
|
RGD Ensembl |
PMID:11748155 PMID:12469128 |
GO_REF:0000107, RGD:729868 |
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:7,687,846...7,697,901
|
|
| G
|
Smarcd3
|
SWI/SNF related BAF chromatin remodeling complex subunit D3
|
involved_in
|
ISO IEA
|
(PMID:18816825) GO_REF:0000107
|
RGD Ensembl |
PMID:18816825 |
GO_REF:0000107 |
NCBI chr 4:11,441,142...11,472,781
Ensembl chr 4:11,441,157...11,472,781
|
|
| G
|
Smo
|
smoothened, frizzled class receptor
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:88274 (PMID:16543460)
|
Ensembl RGD |
PMID:16543460 |
GO_REF:0000107 |
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281
|
|
| G
|
Sox10
|
SRY-box transcription factor 10
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:16857183)
|
Ensembl RGD |
PMID:16857183 |
GO_REF:0000107 |
NCBI chr 7:112,605,721...112,615,097
Ensembl chr 7:112,605,721...112,615,990
|
|
| G
|
Sox2
|
SRY-box transcription factor 2
|
acts_upstream_of_or_within
|
ISO
|
MGI:2181440|MGI:3052123|MGI:3625176 (PMID:15240551), (PMID:16651659)
|
RGD |
PMID:15240551 PMID:16651659 |
|
NCBI chr 2:119,465,131...119,467,542
Ensembl chr 2:119,454,541...119,496,350
|
|
| G
|
Vegfa
|
vascular endothelial growth factor A
|
acts_upstream_of_or_within
|
ISO
|
MGI:106918 (PMID:17215402)
|
RGD |
PMID:17215402 |
|
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:22,439,392...22,468,194
|
|
| G
|
Vegfc
|
vascular endothelial growth factor C
|
acts_upstream_of_or_within
|
IDA
|
PMID:16462734
|
MGI |
PMID:16462734 |
RGD:8554518 |
NCBI chr16:44,445,293...44,560,887
Ensembl chr16:44,445,293...44,560,887
|
|
| G
|
Wdr62
|
WD repeat domain 62
|
|
IMP
|
|
RGD |
PMID:24388750 |
RGD:10047173 |
NCBI chr 1:94,618,992...94,658,097
Ensembl chr 1:94,618,992...94,658,223
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| G
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Zfp335
|
zinc finger protein 335
|
involved_in
|
IEA ISO ISS
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GO_REF:0000107 (PMID:23178126) GO_REF:0000024
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Ensembl RGD UniProt |
PMID:23178126 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:174,046,789...174,073,076
Ensembl chr 3:174,046,243...174,067,534
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|
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| G
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Aspa
|
aspartoacylase
|
|
IMP
|
|
RGD |
PMID:16634055 |
RGD:1599295 |
NCBI chr10:58,390,204...58,443,790
Ensembl chr10:58,379,410...58,443,769
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| G
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Clcn2
|
chloride voltage-gated channel 2
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|
IMP
|
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RGD |
PMID:29344669 |
RGD:213230158 |
NCBI chr11:93,702,382...93,716,059
Ensembl chr11:93,702,360...93,716,059
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| G
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Cxcr4
|
C-X-C motif chemokine receptor 4
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involved_in
|
ISO
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(PMID:20534485)
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RGD |
PMID:20534485 |
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NCBI chr13:42,630,383...42,634,288
Ensembl chr13:42,630,104...42,634,459
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| G
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Dag1
|
dystroglycan 1
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|
IMP
|
|
RGD |
PMID:17395644 |
RGD:11541054 |
NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:117,769,517...117,782,199
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| G
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Enpp2
|
ectonucleotide pyrophosphatase/phosphodiesterase 2
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|
IDA
|
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RGD |
PMID:22139091 |
RGD:9685417 |
NCBI chr 7:88,092,140...88,214,758
Ensembl chr 7:88,092,140...88,214,957
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| G
|
Gsx2
|
GS homeobox 2
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:23042297)
|
Ensembl RGD |
PMID:23042297 |
GO_REF:0000107 |
NCBI chr14:33,477,968...33,480,320
Ensembl chr14:33,477,968...33,480,320
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| G
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Hdac1
|
histone deacetylase 1
|
acts_upstream_of_or_within involved_in
|
IMP ISO IEA
|
MGI:1097691 (PMID:19503085) GO_REF:0000117
|
RGD UniProt |
PMID:19503085 PMID:22573687 |
GO_REF:0000117, RGD:9590148 |
NCBI chr 5:147,138,328...147,165,387
Ensembl chr 5:147,138,156...147,165,387
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| G
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Hdac1l
|
histone deacetylase 1-like
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involved_in
|
IEA
|
GO_REF:0000117
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UniProt |
|
GO_REF:0000117 |
NCBI chr 9:87,901,045...87,903,045
Ensembl chr 9:87,896,472...87,903,613
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| G
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Hdac2
|
histone deacetylase 2
|
acts_upstream_of_or_within involved_in
|
IMP ISO IEA
|
MGI:108086 (PMID:19503085) GO_REF:0000117
|
RGD UniProt |
PMID:19503085 PMID:22573687 |
GO_REF:0000117, RGD:9590148 |
NCBI chr20:42,101,815...42,126,486
Ensembl chr20:42,102,861...42,126,311
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| G
|
Il33
|
interleukin 33
|
|
IMP
|
|
RGD |
PMID:31165473 |
RGD:40400907 |
NCBI chr 1:237,115,478...237,149,897
Ensembl chr 1:237,115,572...237,150,901
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|
| G
|
Il34
|
interleukin 34
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involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:27445335)
|
UniProt RGD |
PMID:27445335 |
GO_REF:0000024 |
NCBI chr19:55,624,368...55,690,576
Ensembl chr19:55,624,369...55,673,376
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| G
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Mdk
|
midkine
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involved_in
|
ISO IEA ISS
|
(PMID:27445335) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:27445335 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:98,356,789...98,358,960
Ensembl chr 3:98,356,789...98,358,743
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|
| G
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Mir219a1
|
microRNA 219a-1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:20223197)
|
RGD |
PMID:20223197 |
|
NCBI chr20:4,831,580...4,831,689
Ensembl chr20:4,831,580...4,831,689
|
|
| G
|
Mir23a
|
microRNA 23a
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24101522)
|
RGD |
PMID:24101522 |
|
NCBI chr19:40,859,769...40,859,843
|
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| G
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Mtor
|
mechanistic target of rapamycin kinase
|
acts_upstream_of_or_within involved_in
|
IMP ISO IEA
|
MGI:2179311|MGI:3850506 (PMID:25411504) GO_REF:0000117 GO_REF:0000107
|
RGD UniProt Ensembl |
PMID:25411504 PMID:19439614 |
GO_REF:0000107 GO_REF:0000117, RGD:10040963 |
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435
|
|
| G
|
Myrf
|
myelin regulatory factor
|
|
IDA
|
|
RGD |
PMID:27370227 |
RGD:213230157 |
NCBI chr 1:216,279,057...216,311,155
Ensembl chr 1:216,279,057...216,311,178
|
|
| G
|
Nkx2-2
|
NK2 homeobox 2
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:1355331 (PMID:11566099)
|
Ensembl RGD |
PMID:11566099 |
GO_REF:0000107 |
NCBI chr 3:155,072,621...155,083,699
Ensembl chr 3:155,073,250...155,083,249
|
|
| G
|
Nkx6-1
|
NK6 homeobox 1
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:8,274,238...8,281,171
Ensembl chr14:8,274,238...8,281,163
|
|
| G
|
Nkx6-2
|
NK6 homeobox 2
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:203,811,582...203,813,122
Ensembl chr 1:203,811,582...203,813,122
|
|
| G
|
Olig2
|
oligodendrocyte transcription factor 2
|
acts_upstream_of_or_within
|
ISO
|
MGI:97347 (PMID:11566099)
|
RGD |
PMID:11566099 |
|
NCBI chr11:43,961,585...43,964,961
Ensembl chr11:43,958,940...43,968,634
|
|
| G
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Pparg
|
peroxisome proliferator-activated receptor gamma
|
|
IMP
|
|
RGD |
PMID:18543250 |
RGD:2301878 |
NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104
|
|
| G
|
Prmt5
|
protein arginine methyltransferase 5
|
|
IMP
|
|
RGD |
PMID:22041901 |
RGD:9491827 |
NCBI chr15:31,938,927...31,948,318
Ensembl chr15:31,938,719...31,948,426
|
|
| G
|
Ptn
|
pleiotrophin
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:27445335), (PMID:30667096)
|
UniProt RGD |
PMID:27445335 PMID:30667096 |
GO_REF:0000024 |
NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:66,260,764...66,342,482
|
|
| G
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Ptpra
|
protein tyrosine phosphatase, receptor type, A
|
|
IMP
|
|
RGD |
PMID:19812040 |
RGD:2314625 |
NCBI chr 3:138,103,261...138,212,835
Ensembl chr 3:138,098,110...138,213,126
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|
| G
|
Ptprz1
|
protein tyrosine phosphatase, receptor type Z1
|
involved_in
|
IMP
|
PMID:30667096
|
UniProt |
PMID:30667096 |
RGD:14397553 |
NCBI chr 4:52,363,006...52,560,905
Ensembl chr 4:52,363,295...52,560,903
|
|
| G
|
Qki
|
QKI, KH domain containing RNA binding
|
involved_in
|
IMP ISO IEA
|
(PMID:21253564) (PMID:28188285) (PMID:20956316) GO_REF:0000117 GO_REF:0000107
|
RGD UniProt Ensembl |
PMID:20956316 PMID:21253564 PMID:28188285 PMID:17575274 |
GO_REF:0000107 GO_REF:0000117, RGD:10045992 |
NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:52,935,382...53,047,337
|
|
| G
|
Rheb
|
Ras homolog, mTORC1 binding
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:2179311|MGI:3850507 (PMID:25411504)
|
Ensembl RGD |
PMID:25411504 |
GO_REF:0000107 |
NCBI chr 4:11,012,173...11,053,860
Ensembl chr 4:11,012,643...11,053,931
|
|
| G
|
Shh
|
sonic hedgehog signaling molecule
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 (PMID:11171336)
|
Ensembl RGD |
PMID:11171336 |
GO_REF:0000107 |
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:7,687,846...7,697,901
|
|
| G
|
Tenm4
|
teneurin transmembrane protein 4
|
involved_in
|
ISO
|
(PMID:22915103)
|
RGD |
PMID:22915103 |
|
NCBI chr 1:157,699,611...160,674,549
Ensembl chr 1:159,974,017...160,674,549
|
|
| G
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Tlr2
|
toll-like receptor 2
|
|
IDA
|
|
RGD |
PMID:21971760 |
RGD:7241097 |
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
|
|
| G
|
Tnfrsf1b
|
TNF receptor superfamily member 1B
|
involved_in
|
IBA ISO
|
GO_REF:0000033 (PMID:27147664)
|
GO_Central RGD |
PMID:27147664 |
GO_REF:0000033 |
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:162,353,848...162,387,411
|
|
| G
|
Tp73
|
tumor protein p73
|
|
IMP
|
|
RGD |
PMID:14960496 |
RGD:2291843 |
NCBI chr 5:169,903,801...169,988,075
Ensembl chr 5:169,903,801...169,963,552
|
|
| G
|
Zfp365
|
zinc finger protein 365
|
involved_in
|
IMP ISO IEA
|
PMID:24481677 (PMID:24481677) GO_REF:0000107
|
RGD Ensembl |
PMID:24481677 PMID:24481677 |
GO_REF:0000107, RGD:13210567 |
NCBI chr20:20,665,122...20,688,607
Ensembl chr20:20,665,046...20,690,114
|
|
| G
|
Zfp488
|
zinc finger protein 488
|
involved_in
|
ISO
|
(PMID:22355521)
|
RGD |
PMID:22355521 |
|
NCBI chr16:9,289,286...9,299,928
Ensembl chr16:9,280,322...9,300,400
|
|
|
|
| G
|
Gjc2
|
gap junction protein, gamma 2
|
|
IMP
|
|
RGD |
PMID:28278052 |
RGD:13208599 |
NCBI chr10:44,462,203...44,470,924
Ensembl chr10:44,462,054...44,470,340
|
|
| G
|
Lrp2
|
LDL receptor related protein 2
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:22354480)
|
UniProt Ensembl RGD |
PMID:22354480 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:74,597,148...74,754,535
|
|
| G
|
Lyn
|
LYN proto-oncogene, Src family tyrosine kinase
|
|
IMP
|
|
RGD |
PMID:15504915 |
RGD:2303714 |
NCBI chr 5:21,437,127...21,553,097
Ensembl chr 5:21,437,084...21,554,461
|
|
| G
|
Nog
|
noggin
|
|
IMP
|
|
RGD |
PMID:14975730 |
RGD:1358325 |
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,625,875...74,628,103
|
|
| G
|
Shh
|
sonic hedgehog signaling molecule
|
|
IDA
|
|
RGD |
PMID:12237843 |
RGD:2306309 |
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:7,687,846...7,697,901
|
|
| G
|
Tf
|
transferrin
|
|
IDA
|
|
RGD |
PMID:23368675 |
RGD:7244376 |
NCBI chr 8:112,668,667...112,695,376
Ensembl chr 8:112,647,642...112,695,400
|
|
|
|
| G
|
Bag1
|
BAG cochaperone 1
|
|
IMP
|
|
RGD |
PMID:23108487 |
RGD:13506903 |
NCBI chr 5:60,864,476...60,877,059
Ensembl chr 5:60,864,476...60,878,161
|
|
| G
|
Dicer1
|
dicer 1 ribonuclease III
|
involved_in
|
ISO
|
(PMID:20463238), (PMID:20805985)
|
RGD |
PMID:20463238 PMID:20805985 |
|
NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:129,396,014...129,457,252
|
|
| G
|
Egr2
|
early growth response 2
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:10068633)
|
UniProt RGD |
PMID:10068633 |
GO_REF:0000024 |
NCBI chr20:21,050,149...21,055,201
Ensembl chr20:21,050,149...21,057,748
|
|
| G
|
Rela
|
RELA proto-oncogene, NF-kB subunit
|
|
IMP
|
|
RGD |
PMID:18385332 |
RGD:2298785 |
NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
|
|
|
|
| G
|
Fgf9
|
fibroblast growth factor 9
|
|
IMP
|
|
RGD |
PMID:22917588 |
RGD:596948403 |
NCBI chr15:36,325,552...36,369,995
Ensembl chr15:36,325,599...36,367,926
|
|
| G
|
Gfap
|
glial fibrillary acidic protein
|
acts_upstream_of_or_within
|
IEA ISO
|
GO_REF:0000107 MGI:1857176 (PMID:16988027)
|
Ensembl RGD |
PMID:16988027 |
GO_REF:0000107 |
NCBI chr10:88,352,987...88,361,661
Ensembl chr10:88,352,986...88,361,685
|
|
| G
|
Mir221
|
microRNA 221
|
|
IMP
|
|
RGD |
PMID:22393241 |
RGD:11041067 |
NCBI chr X:6,023,182...6,023,290
Ensembl chr X:6,023,182...6,023,290
|
|
| G
|
Mir222
|
microRNA 222
|
|
IMP
|
|
RGD |
PMID:22393241 |
RGD:11041067 |
NCBI chr X:6,022,621...6,022,723
Ensembl chr X:6,022,621...6,022,723
|
|
| G
|
Nrg1
|
neuregulin 1
|
|
IMP
|
|
RGD |
PMID:9417836 |
RGD:10449005 |
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:65,953,865...66,999,849
|
|
| G
|
Runx2
|
RUNX family transcription factor 2
|
|
IMP
|
|
RGD |
PMID:34902518 |
RGD:598092504 |
NCBI chr 9:23,661,278...23,990,248
Ensembl chr 9:23,664,952...23,990,027
|
|
Term paths to the root
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