ONTOLOGY REPORT - ANNOTATIONS |
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Term: | negative regulation of neurogenesis |
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Accession: | GO:0050768
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browse the term
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Definition: | Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. |
Synonyms: | exact_synonym: | down regulation of neurogenesis; downregulation of neurogenesis |
| narrow_synonym: | inhibition of neurogenesis |
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Abcc8 |
ATP binding cassette subfamily C member 8 |
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IMP |
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RGD |
PMID:23149556 |
RGD:12790979 |
NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:96,598,647...96,679,510
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Appl2 |
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 |
involved_in |
ISO |
(PMID:28965332), (PMID:29675572) |
RGD |
PMID:28965332 PMID:29675572 |
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NCBI chr 7:22,019,480...22,072,386
Ensembl chr 7:20,135,375...20,184,754
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Arhgef2 |
Rho/Rac guanine nucleotide exchange factor 2 |
involved_in |
ISO |
(PMID:19448628) |
RGD |
PMID:19448628 |
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NCBI chr 2:176,358,909...176,416,178
Ensembl chr 2:174,062,976...174,118,355
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Atf5 |
activating transcription factor 5 |
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IDA |
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RGD |
PMID:12805299 |
RGD:634608 |
NCBI chr 1:104,432,094...104,437,611
Ensembl chr 1:95,295,610...95,299,707
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B2m |
beta-2 microglobulin |
involved_in |
ISO IEA |
(PMID:26147761) GO_REF:0000107 |
RGD Ensembl |
PMID:26147761 |
GO_REF:0000107 |
NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766
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Bmp7 |
bone morphogenetic protein 7 |
acts_upstream_of_or_within |
ISO |
(PMID:17699604) |
RGD |
PMID:17699604 |
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NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788
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Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within |
ISO |
MGI:2158342 (PMID:17699604) |
RGD |
PMID:17699604 |
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NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
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Brinp1 |
BMP/retinoic acid inducible neural specific 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5698819 (PMID:24528488) |
Ensembl RGD |
PMID:24528488 |
GO_REF:0000107 |
NCBI chr 5:87,363,621...87,565,580
Ensembl chr 5:82,348,930...82,493,150
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Ccl11 |
C-C motif chemokine ligand 11 |
involved_in |
ISO |
(PMID:21886162) |
RGD |
PMID:21886162 |
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NCBI chr10:67,525,975...67,530,576
Ensembl chr10:67,028,328...67,032,926
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Cd24 |
CD24 molecule |
acts_upstream_of_or_within |
ISO |
MGI:2179996 (PMID:15737737) |
RGD |
PMID:15737737 |
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NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662
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Ctdsp1 |
CTD small phosphatase 1 |
acts_upstream_of_or_within |
ISO |
MGI:104897 (PMID:17403776) |
RGD |
PMID:17403776 |
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NCBI chr 9:83,422,755...83,428,411
Ensembl chr 9:75,973,962...75,979,297
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Ctnnb1 |
catenin beta 1 |
involved_in |
ISO |
(PMID:26371318) |
RGD |
PMID:26371318 |
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NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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Dll3 |
delta like canonical Notch ligand 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:9272948) |
Ensembl RGD |
PMID:9272948 |
GO_REF:0000107 |
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
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Dnajb11 |
DnaJ heat shock protein family (Hsp40) member B11 |
acts_upstream_of_or_within |
ISO |
PR:Q2EY15 (PMID:20335479) |
RGD |
PMID:20335479 |
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NCBI chr11:91,656,334...91,672,800
Ensembl chr11:78,150,429...78,180,407
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Dynlt1 |
dynein light chain Tctex-type 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19448628) |
UniProt RGD |
PMID:19448628 |
GO_REF:0000024 |
NCBI chr 1:49,292,093...49,299,051
Ensembl chr 1:46,887,017...46,893,881
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Hes1 |
hes family bHLH transcription factor 1 |
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IMP |
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RGD |
PMID:11399758 |
RGD:8554692 |
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
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Hook3 |
hook microtubule-tethering protein 3 |
involved_in |
ISO |
(PMID:20152126) |
RGD |
PMID:20152126 |
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NCBI chr16:72,656,929...72,751,696
Ensembl chr16:65,954,350...66,061,338
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Il1b |
interleukin 1 beta |
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IDA |
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RGD |
PMID:22270046 |
RGD:6482669 |
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415
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Kdm1a |
lysine demethylase 1A |
acts_upstream_of_or_within |
ISO |
(PMID:25018020) |
RGD |
PMID:25018020 |
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NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319
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Lhx2 |
LIM homeobox 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:26371318), (PMID:28053041) |
Ensembl RGD |
PMID:26371318 PMID:28053041 |
GO_REF:0000107 |
NCBI chr 3:42,523,345...42,553,646
Ensembl chr 3:22,126,007...22,143,908
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Mt3 |
metallothionein 3 |
involved_in acts_upstream_of_or_within |
NAS ISO |
PMID:12460603 (PMID:12130647) |
RGD |
PMID:12130647 PMID:12460603 |
RGD:727475 |
NCBI chr19:10,854,676...10,856,080
Ensembl chr19:10,848,755...10,850,158
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Notch1 |
notch receptor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:18299578) |
UniProt RGD |
PMID:18299578 |
GO_REF:0000024 |
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
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Pcm1 |
pericentriolar material 1 |
involved_in |
ISO |
(PMID:20152126) |
RGD |
PMID:20152126 |
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NCBI chr16:51,008,315...51,105,261
Ensembl chr16:51,008,315...51,105,091
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Pitx3 |
paired-like homeodomain 3 |
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IDA |
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RGD |
PMID:18385323 |
RGD:11535083 |
NCBI chr 1:254,942,550...254,955,325
Ensembl chr 1:245,001,164...245,013,892
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Prtg |
protogenin |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:20335479) |
Ensembl RGD |
PMID:20335479 |
GO_REF:0000107 |
NCBI chr 8:73,548,440...73,657,945
Ensembl chr 8:73,548,466...73,653,259
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Rest |
RE1-silencing transcription factor |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2654470 (PMID:17403776) |
UniProt RGD |
PMID:17403776 |
GO_REF:0000024 |
NCBI chr14:31,213,415...31,233,451
Ensembl chr14:30,862,553...30,894,354
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Sorl1 |
sortilin related receptor 1 |
involved_in |
ISO |
(PMID:18362153) |
RGD |
PMID:18362153 |
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NCBI chr 8:51,238,713...51,401,458
Ensembl chr 8:42,341,704...42,504,513
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Trim11 |
tripartite motif-containing 11 |
involved_in |
ISO |
(PMID:18628401) |
RGD |
PMID:18628401 |
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NCBI chr10:44,255,019...44,270,711
Ensembl chr10:43,758,354...43,771,138
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Wnt3a |
Wnt family member 3A |
involved_in |
ISO |
(PMID:12843296) |
RGD |
PMID:12843296 |
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NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
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Wnt7a |
Wnt family member 7A |
involved_in |
ISO |
(PMID:12843296) |
RGD |
PMID:12843296 |
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NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
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Wnt7b |
Wnt family member 7B |
involved_in |
ISO |
(PMID:12843296) |
RGD |
PMID:12843296 |
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NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:116,634,814...116,679,581
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Ldlr |
low density lipoprotein receptor |
involved_in |
IEA ISO |
GO_REF:0000107 UniProtKB:P05067|UniProtKB:P49768 (PMID:20005821) |
Ensembl RGD |
PMID:20005821 |
GO_REF:0000107 |
NCBI chr 8:28,546,191...28,569,075
Ensembl chr 8:20,270,041...20,294,580
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Nr1d1 |
nuclear receptor subfamily 1, group D, member 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:30792350) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:30792350 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:84,224,599...84,231,812
Ensembl chr10:83,728,318...83,735,705
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Trem2 |
triggering receptor expressed on myeloid cells 2 |
involved_in |
ISO |
(PMID:29407460) |
RGD |
PMID:29407460 |
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NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170
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Atf5 |
activating transcription factor 5 |
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IMP |
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RGD |
PMID:15829641 |
RGD:2302988 |
NCBI chr 1:104,432,094...104,437,611
Ensembl chr 1:95,295,610...95,299,707
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Dab1 |
DAB adaptor protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857750 (PMID:18848628) |
Ensembl RGD |
PMID:18848628 |
GO_REF:0000107 |
NCBI chr 5:123,621,510...124,742,585
Ensembl chr 5:119,140,533...119,510,552
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Dll3 |
delta like canonical Notch ligand 3 |
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IDA |
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RGD |
PMID:16144902 |
RGD:1599776 |
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
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F2 |
coagulation factor II, thrombin |
involved_in |
ISO IEA |
(PMID:1691280) GO_REF:0000107 |
RGD Ensembl |
PMID:1691280 |
GO_REF:0000107 |
NCBI chr 3:98,051,958...98,065,246
Ensembl chr 3:77,596,198...77,609,486
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Fgfr3 |
fibroblast growth factor receptor 3 |
acts_upstream_of_or_within |
ISO |
MGI:1931521 (PMID:12574417) |
RGD |
PMID:12574417 |
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NCBI chr14:81,211,800...81,227,215
Ensembl chr14:76,987,993...77,003,341
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Gpr37l1 |
G protein-coupled receptor 37-like 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:5439169 (PMID:24062445) GO_REF:0000107 |
RGD Ensembl |
PMID:24062445 |
GO_REF:0000107 |
NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421
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Hes5 |
hes family bHLH transcription factor 5 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:12666205) |
UniProt RGD |
PMID:12666205 |
GO_REF:0000024 |
NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:165,522,234...165,523,001
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Hmga2 |
high mobility group AT-hook 2 |
acts_upstream_of_or_within |
ISO |
(PMID:18640244) |
RGD |
PMID:18640244 |
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NCBI chr 7:57,762,710...57,884,555
Ensembl chr 7:55,880,112...55,994,784
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Id4 |
inhibitor of DNA binding 4 |
acts_upstream_of_or_within |
ISO |
MGI:88177 (PMID:15882580) |
RGD |
PMID:15882580 |
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NCBI chr17:16,595,724...16,598,293
Ensembl chr17:16,389,387...16,392,470
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Kdm4a |
lysine demethylase 4A |
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IMP |
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RGD |
PMID:24747049 |
RGD:9587433 |
NCBI chr 5:136,958,178...137,004,942
Ensembl chr 5:131,672,754...131,719,501
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Mbd1 |
methyl-CpG binding domain protein 1 |
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IDA |
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RGD |
PMID:16881068 |
RGD:9588644 |
NCBI chr18:70,145,093...70,159,744
Ensembl chr18:67,869,992...67,886,554
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Mecp2 |
methyl CpG binding protein 2 |
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IDA |
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RGD |
PMID:16881068 |
RGD:9588644 |
NCBI chr X:156,932,481...156,995,981
Ensembl chr X:151,789,930...151,844,689
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Mycn |
MYCN proto-oncogene, bHLH transcription factor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:18640244) |
Ensembl RGD |
PMID:18640244 |
GO_REF:0000107 |
NCBI chr 6:41,446,683...41,452,584
Ensembl chr 6:35,717,764...35,723,590
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Nf1 |
neurofibromin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857444|MGI:2176055|MGI:2176057 (PMID:10442636), (PMID:11297510), (PMID:9878702) |
Ensembl RGD |
PMID:9878702 PMID:10442636 PMID:11297510 |
GO_REF:0000107 |
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
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Nog |
noggin |
involved_in |
IMP ISO IEA ISS |
(PMID:18028109) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:18028109 PMID:14975730 |
GO_REF:0000024 GO_REF:0000107, RGD:1358325 |
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
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Nr2e1 |
nuclear receptor subfamily 2, group E, member 1 |
acts_upstream_of_or_within |
ISO |
MGI:2176560 (PMID:14702088) |
RGD |
PMID:14702088 |
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NCBI chr20:47,632,347...47,653,464
Ensembl chr20:46,050,414...46,073,949
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Ntrk3 |
neurotrophic receptor tyrosine kinase 3 |
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IMP |
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RGD |
PMID:12075995 |
RGD:2325633 |
NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:132,132,849...132,503,286
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Actr3 |
actin related protein 3 |
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IMP |
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RGD |
PMID:19846719 |
RGD:11530054 |
NCBI chr13:39,353,413...39,396,509
Ensembl chr13:36,800,093...36,844,124
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Arhgap4 |
Rho GTPase activating protein 4 |
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IMP |
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RGD |
PMID:17804252 |
RGD:2313143 |
NCBI chr X:151,636,071...151,651,528
Ensembl chr X:151,632,454...151,651,128
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Ccr5 |
C-C motif chemokine receptor 5 |
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IMP |
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RGD |
PMID:16537566 |
RGD:4890441 |
NCBI chr 8:132,629,097...132,660,980
Ensembl chr 8:123,752,325...123,759,260
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Cdh1 |
cadherin 1 |
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IMP |
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RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr19:51,402,178...51,471,572
Ensembl chr19:34,492,371...34,561,775
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Cdk5 |
cyclin-dependent kinase 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1197518 (PMID:22573681) |
Ensembl RGD |
PMID:22573681 |
GO_REF:0000107 |
NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112
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Cdkl3 |
cyclin-dependent kinase-like 3 |
acts_upstream_of_or_within involved_in |
IMP ISO IBA |
PMID:20347982 (PMID:20347982) GO_REF:0000033 |
RGD GO_Central |
PMID:20347982 PMID:20347982 |
GO_REF:0000033, RGD:8693354 |
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
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Dip2b |
disco-interacting protein 2 homolog B |
involved_in |
ISO |
(PMID:32153366) |
RGD |
PMID:32153366 |
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NCBI chr 7:133,053,393...133,231,430
Ensembl chr 7:131,174,567...131,349,092
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Draxin |
dorsal inhibitory axon guidance protein |
acts_upstream_of_or_within |
ISO |
(PMID:20621059) |
RGD |
PMID:20621059 |
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NCBI chr 5:163,813,308...163,846,609
Ensembl chr 5:158,530,342...158,564,483
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Fstl4 |
follistatin-like 4 |
NOT|acts_upstream_of_or_within |
ISO |
(PMID:24573299) |
RGD |
PMID:24573299 |
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NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
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Ifrd1 |
interferon-related developmental regulator 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97321 (PMID:18052984) |
Ensembl RGD |
PMID:18052984 |
GO_REF:0000107 |
NCBI chr 6:62,996,560...63,044,996
Ensembl chr 6:57,269,384...57,288,990
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Kiaa0319 |
KIAA0319 homolog |
acts_upstream_of_or_within |
ISO |
(PMID:28334068) |
RGD |
PMID:28334068 |
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NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
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Mag |
myelin-associated glycoprotein |
involved_in |
IMP |
PMID:9298990 |
UniProt |
PMID:9298990 |
RGD:12050149 |
NCBI chr 1:95,275,728...95,291,133
Ensembl chr 1:86,148,228...86,163,656
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Map2 |
microtubule-associated protein 2 |
involved_in |
IMP ISO |
PMID:28426968 (PMID:28426968) |
RGD |
PMID:28426968 PMID:28426968 |
RGD:13514087 |
NCBI chr 9:75,173,038...75,431,606
Ensembl chr 9:67,723,371...67,979,809
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Mt3 |
metallothionein 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:16601975), (PMID:17712581) |
UniProt RGD |
PMID:16601975 PMID:17712581 |
GO_REF:0000024 |
NCBI chr19:10,854,676...10,856,080
Ensembl chr19:10,848,755...10,850,158
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Nrp1 |
neuropilin 1 |
acts_upstream_of_or_within |
ISO |
MGI:107558 (PMID:12852851) |
RGD |
PMID:12852851 |
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NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
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Ntn1 |
netrin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:10704383) |
Ensembl RGD |
PMID:10704383 |
GO_REF:0000107 |
NCBI chr10:53,398,852...53,597,595
Ensembl chr10:52,899,934...53,085,326
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Ptprs |
protein tyrosine phosphatase, receptor type, S |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:19780196) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:19780196 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,245,410...1,306,947
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Rnf6 |
ring finger protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:104572 (PMID:16204183) |
RGD |
PMID:16204183 |
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NCBI chr12:13,929,160...13,940,663
Ensembl chr12:8,816,833...8,826,847
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Rtn4 |
reticulon 4 |
involved_in |
ISS ISO IEA IDA |
PMID:10667797 (PMID:20573699) GO_REF:0000107 (PMID:10667797) |
RGD Ensembl |
PMID:10667797 PMID:20573699 PMID:10667797 PMID:20573699 |
GO_REF:0000107, RGD:8553459, RGD:8554113 |
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:103,449,930...103,497,686
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|
G |
Rtn4r |
reticulon 4 receptor |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22923615) |
UniProt RGD |
PMID:22923615 |
GO_REF:0000024 |
NCBI chr11:96,348,613...96,373,554
Ensembl chr11:82,844,309...82,869,466
|
|
G |
Sema3a |
semaphorin 3A |
acts_upstream_of_or_within |
IDA ISO |
MGI:106206 (PMID:12852851) |
RGD |
PMID:12852851 PMID:12077190 |
RGD:628318 |
NCBI chr 4:22,239,418...22,709,907
Ensembl chr 4:21,287,982...21,494,432
|
|
G |
Sema3g |
semaphorin 3G |
involved_in |
ISO |
(PMID:16098142) |
RGD |
PMID:16098142 |
|
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
|
|
G |
Sema4f |
semaphorin 4F |
acts_upstream_of_or_within |
IDA |
PMID:10051670 |
MGI |
PMID:10051670 |
RGD:69991 |
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
|
|
G |
Sema6c |
semaphorin 6C |
involved_in |
ISO |
(PMID:12110693) |
RGD |
PMID:12110693 |
|
NCBI chr 2:185,422,636...185,436,237
Ensembl chr 2:182,737,474...182,746,856
|
|
G |
Sema6d |
semaphorin 6D |
involved_in |
ISO |
(PMID:12110693) |
RGD |
PMID:12110693 |
|
NCBI chr 3:131,801,680...132,394,578
Ensembl chr 3:111,883,872...111,941,094
|
|
G |
Slit2 |
slit guidance ligand 2 |
acts_upstream_of_or_within |
ISO |
(PMID:12879062) |
RGD |
PMID:12879062 |
|
NCBI chr14:66,829,661...67,168,517
Ensembl chr14:62,617,067...62,955,948
|
|
G |
Tnr |
tenascin R |
acts_upstream_of_or_within |
ISO |
(PMID:16831557) |
RGD |
PMID:16831557 |
|
NCBI chr13:74,285,141...74,706,174
Ensembl chr13:72,091,585...72,167,641
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|
G |
Trim46 |
tripartite motif-containing 46 |
involved_in |
IMP |
PMID:28426968 |
ARUK-UCL |
PMID:28426968 |
RGD:13514087 |
NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
|
|
G |
Ttc3 |
tetratricopeptide repeat domain 3 |
involved_in |
ISO |
(PMID:17488780) |
RGD |
PMID:17488780 |
|
NCBI chr11:47,158,766...47,258,612
Ensembl chr11:33,688,952...33,788,975
|
|
|
G |
Hdac6 |
histone deacetylase 6 |
|
IMP |
|
RGD |
PMID:19884510 |
RGD:9681717 |
NCBI chr X:17,222,538...17,244,373
Ensembl chr X:14,551,044...14,572,441
|
|
G |
Nrp1 |
neuropilin 1 |
acts_upstream_of_or_within |
IMP ISO |
(PMID:9753685) |
RGD |
PMID:9753685 PMID:9288754 |
RGD:633436 |
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
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|
G |
Plxna3 |
plexin A3 |
acts_upstream_of_or_within |
ISO |
MGI:107558|MGI:1096347 (PMID:11683995) |
RGD |
PMID:11683995 |
|
NCBI chr X:157,266,986...157,282,896
Ensembl chr X:152,115,819...152,131,603
|
|
G |
Ryk |
receptor-like tyrosine kinase |
acts_upstream_of_or_within |
ISO |
MGI:98958 (PMID:16723543) |
RGD |
PMID:16723543 |
|
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
|
|
G |
Sema3a |
semaphorin 3A |
acts_upstream_of_or_within |
ISO |
MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685) |
RGD |
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 |
|
NCBI chr 4:22,239,418...22,709,907
Ensembl chr 4:21,287,982...21,494,432
|
|
G |
Sema3f |
semaphorin 3F |
acts_upstream_of_or_within |
ISO |
MGI:107683 (PMID:11683995), (PMID:9753685) |
RGD |
PMID:9753685 PMID:11683995 |
|
NCBI chr 8:117,236,269...117,265,206
Ensembl chr 8:108,357,629...108,387,083
|
|
G |
Sema5a |
semaphorin 5A |
involved_in |
IMP |
PMID:15603739 |
UniProt |
PMID:15603739 |
RGD:8553809 |
NCBI chr 2:85,020,724...85,451,938
Ensembl chr 2:83,309,843...83,741,084
|
|
G |
Slit1 |
slit guidance ligand 1 |
|
IDA |
|
RGD |
PMID:15632296 |
RGD:1358459 |
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
|
|
G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
|
NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099
|
|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
|
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
|
|
G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:101766 (PMID:16723543) |
Ensembl RGD |
PMID:16723543 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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|
|
G |
Kiaa0319 |
KIAA0319 homolog |
acts_upstream_of_or_within |
ISO |
(PMID:28334068) MGI:4362922 (PMID:28334068) |
RGD |
PMID:28334068 |
|
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
|
|
G |
Tnr |
tenascin R |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2154583 (PMID:16870730) |
Ensembl RGD |
PMID:16870730 |
GO_REF:0000107 |
NCBI chr13:74,285,141...74,706,174
Ensembl chr13:72,091,585...72,167,641
|
|
|
G |
Dab1 |
DAB adaptor protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1861918|MGI:1891699 (PMID:21111240) |
Ensembl RGD |
PMID:21111240 |
GO_REF:0000107 |
NCBI chr 5:123,621,510...124,742,585
Ensembl chr 5:119,140,533...119,510,552
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|
G |
Efnb3 |
ephrin B3 |
involved_in |
ISO |
(PMID:12383247) |
RGD |
PMID:12383247 |
|
NCBI chr10:54,773,282...54,780,727
Ensembl chr10:54,274,506...54,280,471
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|
G |
Ephb2 |
Eph receptor B2 |
acts_upstream_of_or_within |
ISO |
(PMID:12971893) |
RGD |
PMID:12971893 |
|
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059
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|
G |
Gdi1 |
GDP dissociation inhibitor 1 |
involved_in |
IDA |
PMID:21856246 |
UniProt |
PMID:21856246 |
RGD:8553614 |
NCBI chr X:157,238,900...157,245,562
Ensembl chr X:152,087,444...152,094,272
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|
G |
Lrp4 |
LDL receptor related protein 4 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22854782) |
UniProt RGD |
PMID:22854782 |
GO_REF:0000024 |
NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:77,429,798...77,483,593
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|
G |
Mbp |
myelin basic protein |
|
IMP |
|
RGD |
PMID:12210134 |
RGD:1358766 |
NCBI chr18:78,130,652...78,241,174
Ensembl chr18:75,855,878...75,966,404
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|
G |
Psen1 |
presenilin 1 |
acts_upstream_of_or_within |
ISO |
MGI:2149116 (PMID:15548218) |
RGD |
PMID:15548218 |
|
NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650
|
|
G |
Pten |
phosphatase and tensin homolog |
involved_in |
ISO |
(PMID:16675393) |
RGD |
PMID:16675393 |
|
NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
|
|
G |
Ptk2 |
protein tyrosine kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857596 (PMID:15378065) |
RGD |
PMID:15378065 |
|
NCBI chr 7:107,015,730...107,220,865
Ensembl chr 7:105,126,728...105,331,783
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G |
Rtn4 |
reticulon 4 |
|
IDA IMP |
|
RGD |
PMID:10667796 PMID:18973596 |
RGD:628417, RGD:2314943 |
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:103,449,930...103,497,686
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|
G |
Rtn4r |
reticulon 4 receptor |
|
TAS |
|
RGD |
PMID:12037567 |
RGD:727379 |
NCBI chr11:96,348,613...96,373,554
Ensembl chr11:82,844,309...82,869,466
|
|
G |
Rufy3 |
RUN and FYVE domain containing 3 |
involved_in |
IDA |
PMID:17439943 |
HGNC-UCL |
PMID:17439943 |
RGD:8554472 |
NCBI chr14:19,715,593...19,790,530
Ensembl chr14:19,432,524...19,507,004
|
|
G |
Syngap1 |
synaptic Ras GTPase activating protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:15014045) |
Ensembl RGD |
PMID:15014045 |
GO_REF:0000107 |
NCBI chr20:5,028,226...5,058,519
Ensembl chr20:5,026,364...5,056,672
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|
G |
Thy1 |
Thy-1 cell surface antigen |
involved_in |
IDA |
PMID:15547945 |
UniProt |
PMID:15547945 |
RGD:8554523 |
NCBI chr 8:53,286,396...53,291,541
Ensembl chr 8:44,389,513...44,394,659
|
|
G |
Trak2 |
trafficking kinesin protein 2 |
|
IMP |
|
RGD |
PMID:23395375 |
RGD:13208834 |
NCBI chr 9:67,842,680...67,909,786
Ensembl chr 9:60,350,012...60,413,996
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|
G |
Tsc2 |
TSC complex subunit 2 |
|
IMP |
|
RGD |
PMID:18794346 |
RGD:11568688 |
NCBI chr10:14,125,679...14,160,317
Ensembl chr10:13,621,136...13,655,951
|
|
|
G |
Bcl11a |
BCL11 transcription factor A |
involved_in |
ISO |
(PMID:19616629) |
RGD |
PMID:19616629 |
|
NCBI chr14:102,230,147...102,325,289
Ensembl chr14:98,030,461...98,124,180
|
|
G |
Epha7 |
Eph receptor A7 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:19036963) |
Ensembl RGD |
PMID:19036963 |
GO_REF:0000107 |
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
|
|
G |
Fgf13 |
fibroblast growth factor 13 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22726441) |
UniProt RGD |
PMID:22726441 |
GO_REF:0000024 |
NCBI chr X:142,312,381...142,838,581
Ensembl chr X:137,276,511...137,800,391
|
|
G |
Fstl4 |
follistatin-like 4 |
acts_upstream_of_or_within |
ISO |
(PMID:24573299) |
RGD |
PMID:24573299 |
|
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
|
|
G |
Ifrd1 |
interferon-related developmental regulator 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97321 (PMID:18052984) |
Ensembl RGD |
PMID:18052984 |
GO_REF:0000107 |
NCBI chr 6:62,996,560...63,044,996
Ensembl chr 6:57,269,384...57,288,990
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|
G |
Ptprs |
protein tyrosine phosphatase, receptor type, S |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:22519304) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:22519304 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,245,410...1,306,947
|
|
G |
Rgma |
repulsive guidance molecule BMP co-receptor a |
|
IMP |
|
RGD |
PMID:23744345 |
RGD:9850124 |
NCBI chr 1:136,538,782...136,582,763
Ensembl chr 1:127,128,934...127,172,918
|
|
G |
Ulk1 |
unc-51 like autophagy activating kinase 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:17389358) |
GO_Central RGD |
PMID:17389358 |
GO_REF:0000033 |
NCBI chr12:51,511,492...51,537,746
Ensembl chr12:45,851,710...45,877,966
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|
G |
Ulk2 |
unc-51 like autophagy activating kinase 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:17389358) |
GO_Central RGD |
PMID:17389358 |
GO_REF:0000033 |
NCBI chr10:46,951,038...47,029,844
Ensembl chr10:46,454,030...46,530,407
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|
|
G |
Spart |
spartin |
acts_upstream_of_or_within |
ISO |
MGI:1919205|MGI:5430946 (PMID:22619377) |
RGD |
PMID:22619377 |
|
NCBI chr 2:141,442,770...141,469,388
Ensembl chr 2:139,292,355...139,319,248
|
|
|
G |
Spp1 |
secreted phosphoprotein 1 |
|
IEP |
|
RGD |
PMID:15625076 |
RGD:1581125 |
NCBI chr14:5,613,569...5,620,695
Ensembl chr14:5,308,885...5,315,162
|
|
|
G |
Cit |
citron rho-interacting serine/threonine kinase |
acts_upstream_of_or_within |
ISO |
(PMID:12781320) |
RGD |
PMID:12781320 |
|
NCBI chr12:46,263,881...46,425,642
Ensembl chr12:40,605,563...40,763,860
|
|
G |
Dpysl5 |
dihydropyrimidinase-like 5 |
involved_in |
ISO |
(PMID:33894126) |
RGD |
PMID:33894126 |
|
NCBI chr 6:25,575,104...25,659,422
Ensembl chr 6:25,575,104...25,659,422
|
|
G |
Gorasp1 |
golgi reassembly stacking protein 1 |
involved_in |
IEA IMP ISO |
GO_REF:0000107 PMID:21572988 (PMID:21572988) |
Ensembl RGD |
PMID:21572988 PMID:21572988 |
GO_REF:0000107, RGD:8554449 |
NCBI chr 8:119,655,267...119,667,022
Ensembl chr 8:119,655,268...119,666,972
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|
G |
Gsk3b |
glycogen synthase kinase 3 beta |
|
IMP |
|
RGD |
PMID:17182785 |
RGD:2301767 |
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
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|
G |
Id1 |
inhibitor of DNA binding 1 |
|
IMP |
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr 3:161,671,525...161,672,691
Ensembl chr 3:141,211,267...141,212,419
|
|
G |
Mt3 |
metallothionein 3 |
involved_in |
NAS |
PMID:12460603 |
UniProt |
PMID:12460603 |
RGD:727475 |
NCBI chr19:10,854,676...10,856,080
Ensembl chr19:10,848,755...10,850,158
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|
G |
Nfatc4 |
nuclear factor of activated T-cells 4 |
acts_upstream_of_or_within |
ISO |
(PMID:23407945) |
RGD |
PMID:23407945 |
|
NCBI chr15:33,256,912...33,284,522
Ensembl chr15:29,305,535...29,314,610
|
|
G |
Ppp3ca |
protein phosphatase 3 catalytic subunit alpha |
acts_upstream_of_or_within |
ISO |
(PMID:23407945) |
RGD |
PMID:23407945 |
|
NCBI chr 2:227,839,058...228,113,560
Ensembl chr 2:225,165,766...225,438,974
|
|
G |
Rapgef2 |
Rap guanine nucleotide exchange factor 2 |
involved_in |
ISO ISS |
(PMID:16272156) GO_REF:0000024 |
RGD UniProt |
PMID:16272156 |
GO_REF:0000024 |
NCBI chr 2:166,505,868...166,728,139
Ensembl chr 2:164,207,513...164,244,247
|
|
G |
Tlx2 |
T-cell leukemia homeobox 2 |
acts_upstream_of_or_within |
ISO |
(PMID:9738002) |
RGD |
PMID:9738002 |
|
NCBI chr 4:117,131,516...117,133,359
Ensembl chr 4:115,573,799...115,575,642
|
|
G |
Trpc5 |
transient receptor potential cation channel, subfamily C, member 5 |
|
IMP |
|
RGD |
PMID:22764246 |
RGD:10044012 |
NCBI chr X:112,742,828...113,027,638
Ensembl chr X:107,939,131...108,230,991
|
|
G |
Trpc6 |
transient receptor potential cation channel, subfamily C, member 6 |
|
IMP |
|
RGD |
PMID:22764246 |
RGD:10044012 |
NCBI chr 8:14,044,216...14,148,808
Ensembl chr 8:5,758,935...5,828,092
|
|
G |
Ywhah |
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:9738002) |
Ensembl RGD |
PMID:9738002 |
GO_REF:0000107 |
NCBI chr14:81,920,819...81,930,202
Ensembl chr14:77,696,333...77,705,741
|
|
|
G |
Casz1 |
castor zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:3052661|MGI:4841554 (PMID:25654255) |
RGD |
PMID:25654255 |
|
NCBI chr 5:164,527,083...164,677,037
Ensembl chr 5:159,243,995...159,393,400
|
|
G |
Lin28a |
lin-28 homolog A |
acts_upstream_of_or_within |
ISO |
(PMID:20179095) |
RGD |
PMID:20179095 |
|
NCBI chr 5:151,510,891...151,527,884
Ensembl chr 5:146,227,119...146,244,122
|
|
|
G |
Abcc8 |
ATP binding cassette subfamily C member 8 |
|
IMP |
|
RGD |
PMID:23149556 |
RGD:12790979 |
NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:96,598,647...96,679,510
|
|
G |
Adcyap1 |
adenylate cyclase activating polypeptide 1 |
|
IDA |
|
RGD |
PMID:15870074 |
RGD:2325307 |
NCBI chr 9:120,550,236...120,569,096
Ensembl chr 9:113,103,718...113,109,773
|
|
G |
Cdkn2b |
cyclin-dependent kinase inhibitor 2B |
|
IMP |
|
RGD |
PMID:26526028 |
RGD:11252201 |
NCBI chr 5:109,123,308...109,134,906
Ensembl chr 5:104,010,680...104,019,050
|
|
G |
Cysltr2 |
cysteinyl leukotriene receptor 2 |
|
IMP |
|
RGD |
PMID:17910051 |
RGD:5144007 |
NCBI chr15:54,599,043...54,638,314
Ensembl chr15:48,189,073...48,304,136
|
|
G |
Dicer1 |
dicer 1 ribonuclease III |
acts_upstream_of_or_within |
ISO |
GO:0060253 (PMID:20805985) |
RGD |
PMID:20805985 |
|
NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
|
|
G |
Hes1 |
hes family bHLH transcription factor 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:12666205) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:12666205 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
|
|
G |
Idh2 |
isocitrate dehydrogenase (NADP(+)) 2 |
|
IMP |
|
RGD |
PMID:21641335 |
RGD:11522736 |
NCBI chr 1:143,447,925...143,467,248
Ensembl chr 1:134,029,772...134,058,025
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G |
Mfn2 |
mitofusin 2 |
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IMP |
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RGD |
PMID:25017825 |
RGD:13204822 |
NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342
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G |
Mir146a |
microRNA 146a |
involved_in |
ISO |
(PMID:29384235) |
RGD |
PMID:29384235 |
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NCBI chr10:28,349,996...28,350,090
Ensembl chr10:27,848,516...27,848,610
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G |
Negr1 |
neuronal growth regulator 1 |
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IDA |
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RGD |
PMID:22374746 |
RGD:596948409 |
NCBI chr 2:248,283,164...249,015,538
Ensembl chr 2:245,624,435...246,356,730
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G |
Nf1 |
neurofibromin 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857444|MGI:1857478|MGI:96680|MGI:97874|MGI:98834 (PMID:10442636), (PMID:10973261), (PMID:11246230), (PMID:15665300) |
RGD |
PMID:10442636 PMID:10973261 PMID:11246230 PMID:15665300 |
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NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
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G |
Notch1 |
notch receptor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:12666205) |
UniProt RGD |
PMID:12666205 |
GO_REF:0000024 |
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
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G |
Ntm |
neurotrimin |
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IDA |
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RGD |
PMID:22374746 |
RGD:596948409 |
NCBI chr 8:35,634,929...36,625,081
Ensembl chr 8:27,377,773...28,366,595
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G |
Opcml |
opioid binding protein/cell adhesion molecule-like |
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IDA |
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RGD |
PMID:22374746 |
RGD:596948409 |
NCBI chr 8:34,451,629...35,562,897
Ensembl chr 8:26,192,841...27,300,620
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G |
Ptn |
pleiotrophin |
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IMP |
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RGD |
PMID:17881084 |
RGD:2292001 |
NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456
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G |
Rb1 |
RB transcriptional corepressor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97306 (PMID:11246230) |
Ensembl RGD |
PMID:11246230 |
GO_REF:0000107 |
NCBI chr15:54,780,858...54,911,989
Ensembl chr15:48,371,296...48,502,302
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G |
Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19808959) |
UniProt RGD |
PMID:19808959 |
GO_REF:0000024 |
NCBI chr 6:49,736,773...49,738,794
Ensembl chr 6:44,008,340...44,010,354
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G |
Tert |
telomerase reverse transcriptase |
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IDA |
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RGD |
PMID:21940960 |
RGD:11038672 |
NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561
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G |
Tp53 |
tumor protein p53 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97306 (PMID:10973261), (PMID:11246230) |
Ensembl RGD |
PMID:10973261 PMID:11246230 |
GO_REF:0000107 |
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
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G |
Tspo |
translocator protein |
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IDA |
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RGD |
PMID:14678758 |
RGD:2317158 |
NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:114,720,188...114,730,450
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G |
Atoh1 |
atonal bHLH transcription factor 1 |
involved_in |
ISO |
UniProtKB:Q10574 (PMID:32665354) |
RGD |
PMID:32665354 |
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NCBI chr 4:95,241,933...95,244,028
Ensembl chr 4:93,912,068...93,914,154
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G |
Pitx3 |
paired-like homeodomain 3 |
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IDA |
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RGD |
PMID:18385323 |
RGD:11535083 |
NCBI chr 1:254,942,550...254,955,325
Ensembl chr 1:245,001,164...245,013,892
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G |
Bdnf |
brain-derived neurotrophic factor |
acts_upstream_of_or_within |
ISO |
(PMID:12798291) |
RGD |
PMID:12798291 |
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NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615
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G |
Btg2 |
BTG anti-proliferation factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3525505 (PMID:20020054) |
RGD |
PMID:20020054 |
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NCBI chr13:48,083,931...48,087,690
Ensembl chr13:45,531,925...45,535,628
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G |
Cd24 |
CD24 molecule |
acts_upstream_of_or_within |
ISO |
MGI:2179996 (PMID:11978835) |
RGD |
PMID:11978835 |
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NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662
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G |
Ctnna1 |
catenin alpha 1 |
acts_upstream_of_or_within |
ISO |
MGI:108075|MGI:2176173|MGI:2677796 (PMID:16543460) |
RGD |
PMID:16543460 |
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NCBI chr18:27,002,330...27,135,009
Ensembl chr18:26,728,485...26,860,910
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G |
Fgfr3 |
fibroblast growth factor receptor 3 |
acts_upstream_of_or_within |
ISO |
MGI:2135676 (PMID:15708559) |
RGD |
PMID:15708559 |
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NCBI chr14:81,211,800...81,227,215
Ensembl chr14:76,987,993...77,003,341
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G |
Gata2 |
GATA binding protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857743 (PMID:16672344) |
RGD |
PMID:16672344 |
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NCBI chr 4:122,211,501...122,225,058
Ensembl chr 4:120,658,986...120,667,761
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G |
Kctd11 |
potassium channel tetramerization domain containing 11 |
acts_upstream_of_or_within |
ISO |
(PMID:16148242) |
RGD |
PMID:16148242 |
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NCBI chr10:55,101,292...55,103,455
Ensembl chr10:54,599,754...54,604,760
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G |
Kifap3 |
kinesin-associated protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:3043822|MGI:3579409|MGI:3579410 (PMID:15834408) |
RGD |
PMID:15834408 |
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NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
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G |
Mir137 |
microRNA 137 |
involved_in |
ISO |
(PMID:23400681) |
RGD |
PMID:23400681 |
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NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
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G |
Nf1 |
neurofibromin 1 |
involved_in acts_upstream_of_or_within |
ISS ISO IEA |
GO_REF:0000024 MGI:1857444 (PMID:15944386), (PMID:7926784) GO_REF:0000107 |
HGNC-UCL RGD Ensembl |
PMID:7926784 PMID:15944386 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
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G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3521718 (PMID:15548580) |
Ensembl RGD |
PMID:15548580 |
GO_REF:0000107 |
NCBI chr 3:112,590,034...112,611,771
Ensembl chr 3:92,135,637...92,157,014
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G |
Prox1 |
prospero homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2386336 (PMID:12692551) |
RGD |
PMID:12692551 |
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NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183
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G |
Ptn |
pleiotrophin |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:15121180) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:15121180 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456
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G |
Tgfb1 |
transforming growth factor, beta 1 |
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IDA |
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RGD |
PMID:16177030 |
RGD:1579761 |
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
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G |
Tp53 |
tumor protein p53 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97306 (PMID:9608530) |
Ensembl RGD |
PMID:9608530 |
GO_REF:0000107 |
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
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G |
Vax1 |
ventral anterior homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1859863 (PMID:15590934) |
RGD |
PMID:15590934 |
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NCBI chr 1:268,310,644...268,326,713
Ensembl chr 1:258,326,276...258,330,192
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G |
Vsx2 |
visual system homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1856112 (PMID:16384989) |
RGD |
PMID:16384989 |
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NCBI chr 6:109,932,943...109,972,005
Ensembl chr 6:104,217,230...104,240,018
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G |
Bmp4 |
bone morphogenetic protein 4 |
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IMP |
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RGD |
PMID:16388796 PMID:22710965 |
RGD:2289009, RGD:9068402 |
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
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G |
Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1858008 (PMID:19503085) |
Ensembl RGD |
PMID:19503085 |
GO_REF:0000107 |
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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G |
Daam2 |
dishevelled associated activator of morphogenesis 2 |
involved_in |
IBA ISO |
GO_REF:0000033 (PMID:25754822) |
GO_Central RGD |
PMID:25754822 |
GO_REF:0000033 |
NCBI chr 9:11,428,913...11,546,982
Ensembl chr 9:11,428,724...11,545,497
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G |
Dlx1 |
distal-less homeobox 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:94902 (PMID:17678855), (PMID:23042297) |
Ensembl RGD |
PMID:17678855 PMID:23042297 |
GO_REF:0000107 |
NCBI chr 3:76,763,864...76,768,454
Ensembl chr 3:56,356,190...56,360,780
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G |
Dlx2 |
distal-less homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:94901 (PMID:17678855), (PMID:23042297) |
Ensembl RGD |
PMID:17678855 PMID:23042297 |
GO_REF:0000107 |
NCBI chr 3:76,777,912...76,781,255
Ensembl chr 3:56,370,483...56,373,597
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G |
Drd3 |
dopamine receptor D3 |
acts_upstream_of_or_within |
ISO |
(PMID:9651217) |
RGD |
PMID:9651217 |
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NCBI chr11:70,385,586...70,437,793
Ensembl chr11:56,879,689...56,940,596
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G |
Dusp10 |
dual specificity phosphatase 10 |
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IMP |
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RGD |
PMID:19139271 |
RGD:7775012 |
NCBI chr13:98,145,317...98,183,304
Ensembl chr13:95,614,292...95,651,716
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G |
Hes1 |
hes family bHLH transcription factor 1 |
involved_in |
IMP ISO ISS IEA |
(PMID:12666205) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:12666205 PMID:12666205 |
GO_REF:0000024 GO_REF:0000107, RGD:9685388 |
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
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G |
Hes5 |
hes family bHLH transcription factor 5 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:12666205) MGI:2149674 (PMID:17006542) |
UniProt RGD |
PMID:12666205 PMID:17006542 |
GO_REF:0000024 |
NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:165,522,234...165,523,001
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G |
Id2 |
inhibitor of DNA binding 2 |
acts_upstream_of_or_within |
ISO |
MGI:2384134 (PMID:11301021) |
RGD |
PMID:11301021 |
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NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400
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G |
Id4 |
inhibitor of DNA binding 4 |
acts_upstream_of_or_within |
ISO |
MGI:3579084 (PMID:16862533) |
RGD |
PMID:16862533 |
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NCBI chr17:16,595,724...16,598,293
Ensembl chr17:16,389,387...16,392,470
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G |
Lingo1 |
leucine rich repeat and Ig domain containing 1 |
acts_upstream_of_or_within |
ISO |
(PMID:15895088) |
RGD |
PMID:15895088 |
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NCBI chr 8:65,907,275...66,089,485
Ensembl chr 8:57,010,007...57,196,544
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G |
Nf1 |
neurofibromin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO ISS |
GO_REF:0000107 MGI:1857444 (PMID:15944386) GO_REF:0000024 |
Ensembl RGD HGNC-UCL |
PMID:15944386 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
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G |
Nkx6-1 |
NK6 homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1352738 (PMID:15629702) |
RGD |
PMID:15629702 |
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NCBI chr14:8,274,238...8,281,171
Ensembl chr14:7,969,756...7,976,681
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G |
Nkx6-2 |
NK6 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1206039 (PMID:15629702) |
RGD |
PMID:15629702 |
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NCBI chr 1:203,811,582...203,813,122
Ensembl chr 1:194,381,975...194,383,515
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G |
Notch1 |
notch receptor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:12666205) |
UniProt RGD |
PMID:12666205 |
GO_REF:0000024 |
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
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G |
Sirt2 |
sirtuin 2 |
|
IMP |
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RGD |
PMID:17344398 |
RGD:8553877 |
NCBI chr 1:93,181,472...93,204,499
Ensembl chr 1:84,052,903...84,076,975
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G |
Tmem98 |
transmembrane protein 98 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:30249802) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:30249802 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:66,293,895...66,304,806
Ensembl chr10:65,796,145...65,807,079
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G |
Sirt2 |
sirtuin 2 |
involved_in |
IMP |
PMID:17344398 |
UniProt |
PMID:17344398 |
RGD:8553877 |
NCBI chr 1:93,181,472...93,204,499
Ensembl chr 1:84,052,903...84,076,975
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G |
Ascl2 |
achaete-scute family bHLH transcription factor 2 |
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IDA |
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RGD |
PMID:12196582 |
RGD:625617 |
NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406
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G |
Cers2 |
ceramide synthase 2 |
|
IMP |
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RGD |
PMID:22393241 |
RGD:11041067 |
NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:182,890,493...182,933,314
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G |
Dicer1 |
dicer 1 ribonuclease III |
involved_in |
ISO |
(PMID:20805985) |
RGD |
PMID:20805985 |
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NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
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G |
Fas |
Fas cell surface death receptor |
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IMP |
|
RGD |
PMID:29970988 |
RGD:13792563 |
NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591
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G |
Mir182 |
microRNA 182 |
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IDA |
|
RGD |
PMID:22917588 |
RGD:596948403 |
NCBI chr 4:59,752,246...59,752,307
Ensembl chr 4:58,784,818...58,784,879
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G |
Nf1 |
neurofibromin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857444|UniProtKB:Q02297 (PMID:9001241) |
Ensembl RGD |
PMID:9001241 |
GO_REF:0000107 |
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
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G |
Nf2 |
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1926957 (PMID:10887156) |
Ensembl RGD |
PMID:10887156 |
GO_REF:0000107 |
NCBI chr14:83,850,894...83,934,263
Ensembl chr14:79,627,399...79,710,667
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G |
Rnf10 |
ring finger protein 10 |
involved_in |
IDA |
PMID:18941509 |
UniProt |
PMID:18941509 |
RGD:8553607 |
NCBI chr12:47,002,409...47,036,201
Ensembl chr12:41,341,717...41,375,504
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G |
Ski |
Ski proto-oncogene |
acts_upstream_of_or_within |
ISO |
UniProtKB:P01137 (PMID:15312649) |
RGD |
PMID:15312649 |
|
NCBI chr 5:170,995,851...171,064,957
Ensembl chr 5:165,714,093...165,782,733
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G |
Sox10 |
SRY-box transcription factor 10 |
|
IMP |
|
RGD |
PMID:25536222 |
RGD:12879826 |
NCBI chr 7:112,605,721...112,615,097
Ensembl chr 7:110,725,274...110,735,544
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G |
Cers2 |
ceramide synthase 2 |
involved_in |
IMP |
PMID:22393241 |
BHF-UCL |
PMID:22393241 |
RGD:11041067 |
NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:182,890,493...182,933,314
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G |
Syt4 |
synaptotagmin 4 |
involved_in |
ISO |
(PMID:15390175) |
RGD |
PMID:15390175 |
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NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
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Term paths to the root
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