Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:presynaptic active zone
go back to main search page
Accession:GO:0048786 term browser browse the term
Definition:A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.
Synonyms:exact_synonym: pre-synaptic active zone;   presynaptic specialization
 narrow_synonym: pre-synaptic active zone component
 xref: NIF_Subcellular:sao792027222


show annotations for term's descendants           Sort by:
presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy8 adenylate cyclase 8 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17335981), (PMID:18448650)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17335981 PMID:18448650 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:98,306,434...98,555,687
Ensembl chr 7:96,417,324...96,665,911 		JBrowse link
G Adora1 adenosine A1 receptor IDA RGD PMID:16481441 RGD:1625231 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Adora2a adenosine A2a receptor IDA RGD PMID:16481441 RGD:1625231 NCBI chr20:13,315,270...13,332,802
Ensembl chr20:13,315,853...13,333,386 		JBrowse link
G App amyloid beta precursor protein is_active_in ISO (PMID:23815291) RGD PMID:23815291 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Arfgap3 ARF GTPase activating protein 3 is_active_in ISO (PMID:24719103) RGD PMID:24719103 NCBI chr 7:116,312,996...116,359,300
Ensembl chr 7:114,432,873...114,479,208 		JBrowse link
G Arhgap44 Rho GTPase activating protein 44 is_active_in IDA
IBA		 PMID:23739967
GO_REF:0000033		 GO_Central PMID:23739967 GO_REF:0000033, RGD:12050108 NCBI chr10:50,154,724...50,322,027
Ensembl chr10:49,655,584...49,824,297 		JBrowse link
G Brsk1 BR serine/threonine kinase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:78,162,944...78,193,598
Ensembl chr 1:69,134,565...69,160,365 		JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) located_in IDA
IEA
ISO		 PMID:22875941
GO_REF:0000107
GO_REF:0000044
(PMID:15935055), (PMID:21356198), (PMID:23791195), (PMID:25709106)
PMID:15978582		 Ensembl
UniProt
RGD		 PMID:15935055 PMID:21356198 PMID:23791195 PMID:25709106 PMID:22875941 More... GO_REF:0000044 GO_REF:0000107, RGD:14390063, RGD:8661623 NCBI chr 8:117,663,447...117,754,412
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G C1qbp complement C1q binding protein is_active_in IDA
EXP		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr10:56,198,534...56,203,185
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Cacna1b calcium voltage-gated channel subunit alpha1 B is_active_in ISO (PMID:25891347) RGD PMID:25891347 NCBI chr 3:27,779,133...27,944,292
Ensembl chr 3:7,380,922...7,546,091 		JBrowse link
G Cd200 Cd200 molecule is_active_in ISO (PMID:27565350) RGD PMID:27565350 NCBI chr11:68,916,200...68,943,570
Ensembl chr11:55,410,196...55,501,648 		JBrowse link
G Cntnap1 contactin associated protein 1 is_active_in IDA
EXP		 PMID:19187093 SynGO PMID:19187093 PMID:19187093 RGD:10003050, RGD:10003050 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611 		JBrowse link
G Dao D-amino-acid oxidase located_in IDA
IEA		 PMID:21700703
GO_REF:0000044		 UniProt PMID:21700703 GO_REF:0000044, RGD:401966870 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Dgki diacylglycerol kinase, iota located_in IDA PMID:21119615 MGI PMID:21119615 RGD:8554416 NCBI chr 4:66,377,897...66,839,790
Ensembl chr 4:65,420,108...65,872,733 		JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:58,029,934...58,204,010
Ensembl chr 2:56,302,566...56,476,298 		JBrowse link
G Ehd1 EH-domain containing 1 is_active_in IDA PMID:20696250 SynGO PMID:20696250 RGD:405650383 NCBI chr 1:213,009,113...213,031,488
Ensembl chr 1:203,579,869...203,602,212 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:154,435,936...154,727,987
Ensembl chr 4:152,767,419...153,055,639 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 located_in IDA
IEA		 PMID:22875941
GO_REF:0000044		 UniProt PMID:22875941 GO_REF:0000044, RGD:14390063 NCBI chr16:2,819,399...3,680,258
Ensembl chr16:2,848,620...3,670,776 		JBrowse link
G Flot1 flotillin 1 is_active_in EXP
IDA		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr20:2,922,662...2,932,906
Ensembl chr20:2,917,137...2,927,978 		JBrowse link
G Fzd3 frizzled class receptor 3 located_in ISO
IEA		 (PMID:18986540)
GO_REF:0000107		 RGD
Ensembl		 PMID:18986540 GO_REF:0000107 NCBI chr15:43,596,962...43,664,047
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
G Gad1 glutamate decarboxylase 1 located_in
is_active_in		 IDA
ISO
IBA
IEA		 PMID:24613359
(PMID:12074840), (PMID:18165320), (PMID:23258346)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12074840 PMID:18165320 PMID:23258346 PMID:24613359 GO_REF:0000033 GO_REF:0000107, RGD:10047247 NCBI chr 3:75,777,260...75,818,099
Ensembl chr 3:55,369,704...55,410,333 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 located_in IDA PMID:23822769 UniProt PMID:23822769 RGD:8554508 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889 		JBrowse link
G Grip1 glutamate receptor interacting protein 1 IDA MMO:0000538 RGD PMID:15912503 RGD:2326122 NCBI chr 7:56,820,501...57,477,877
Ensembl chr 7:54,934,250...55,592,273 		JBrowse link
G Grm7 glutamate metabotropic receptor 7 located_in IDA PMID:8764662 RGD
UniProt		 PMID:9300765 PMID:8764662 PMID:12823458 RGD:1643599, RGD:8553461, RGD:2289008 NCBI chr 4:145,286,714...146,169,099
Ensembl chr 4:143,731,259...144,612,344 		JBrowse link
G Map1a microtubule-associated protein 1A is_active_in IDA
IEP		 PMID:18971475 SynGO PMID:18971475 PMID:18971475 RGD:405650353, RGD:405650353 NCBI chr 3:128,716,907...128,736,638
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IDA RGD PMID:16477614 RGD:1626131 NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,559,043...5,869,136 		JBrowse link
G Nufip1 nuclear FMR1 interacting protein 1 located_in IDA PMID:12941608 HGNC-UCL PMID:12941608 RGD:13432353 NCBI chr15:51,429,518...51,460,308
Ensembl chr15:51,429,549...51,460,310 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) located_in IDA
IEA		 GO_REF:0000044
PMID:22875941		 UniProt
RGD		 PMID:11182086 PMID:22875941 GO_REF:0000044, RGD:9850132, RGD:14390063 NCBI chr 4:20,646,604...21,005,171
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
G Phb2 prohibitin 2 is_active_in EXP
IDA		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr 4:159,203,948...159,208,561
Ensembl chr 4:157,517,577...157,522,272 		JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha is_active_in ISO
IEA		 (PMID:21998198)
GO_REF:0000107		 RGD
Ensembl		 PMID:21998198 GO_REF:0000107 NCBI chr 1:250,850,440...250,878,399
Ensembl chr 1:240,902,855...240,929,337 		JBrowse link
G Pnisr PNN interacting serine and arginine rich protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:35,395,965...35,422,852
Ensembl chr 5:35,395,965...35,422,844 		JBrowse link
G Ppfia1 PTPRF interacting protein alpha 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:199,641,277...199,718,371
Ensembl chr 1:199,641,277...199,717,277 		JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599 		JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 is_active_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:29439199)		 GO_Central
Ensembl
RGD		 PMID:29439199 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798 		JBrowse link
G Ppfia4 PTPRF interacting protein alpha 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,753,827...45,802,305
Ensembl chr13:45,753,827...45,802,261 		JBrowse link
G Ppfibp1 PPFIA binding protein 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:181,538,249...181,682,079
Ensembl chr 4:179,808,794...179,951,428 		JBrowse link
G Ppfibp2 PPFIA binding protein 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:161,504,774...161,687,339
Ensembl chr 1:161,504,890...161,655,212 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18448650)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18448650 GO_REF:0000024 GO_REF:0000107 NCBI chr16:18,718,164...18,722,273
Ensembl chr16:18,684,188...18,688,336 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 is_active_in ISO (PMID:22986902) RGD PMID:22986902 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 located_in IDA PMID:21119615 MGI PMID:21119615 RGD:8554416 NCBI chr 1:208,575,144...209,020,300
Ensembl chr 1:199,169,429...199,589,394 		JBrowse link
G Slc17a7 solute carrier family 17 member 7 located_in IDA
ISO		 PMID:24613359
(PMID:18986540)		 RGD PMID:18986540 PMID:24613359 RGD:10047247 NCBI chr 1:104,786,172...104,798,049
Ensembl chr 1:95,649,745...95,661,588 		JBrowse link
G Slc32a1 solute carrier family 32 member 1 located_in ISO
IEA		 (PMID:23258346)
GO_REF:0000107		 RGD
Ensembl		 PMID:23258346 GO_REF:0000107 NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844 		JBrowse link
G Snap47 synaptosome associated protein 47 is_active_in IDA PMID:28751858 SynGO PMID:28751858 RGD:13702396 NCBI chr10:44,692,430...44,733,986
Ensembl chr10:44,191,218...44,234,424 		JBrowse link
G Sv2a synaptic vesicle glycoprotein 2a located_in
is_active_in		 IDA
ISO		 PMID:22875941
(PMID:24035762)
(PMID:21664258)		 RGD PMID:21664258 PMID:24035762 PMID:22875941 RGD:14390063 NCBI chr 2:183,741,489...183,757,290
Ensembl chr 2:183,741,547...183,756,927 		JBrowse link
G Syn1 synapsin I located_in IDA
IEA
ISO		 PMID:21119615
GO_REF:0000107
(PMID:16621800)		 Ensembl
RGD		 PMID:16621800 PMID:21119615 GO_REF:0000107, RGD:8554416 NCBI chr  X:3,725,745...3,780,940
Ensembl chr  X:1,172,208...1,227,396 		JBrowse link
G Syp synaptophysin located_in
is_active_in		 IDA
ISO
IBA		 PMID:17310244
(PMID:21664258)
GO_REF:0000033		 RGD
GO_Central		 PMID:21664258 PMID:17310244 GO_REF:0000033, RGD:10047256 NCBI chr  X:17,521,348...17,536,449
Ensembl chr  X:14,849,444...14,864,745 		JBrowse link
G Syt1 synaptotagmin 1 is_active_in IDA PMID:28686803 SynGO PMID:28686803 RGD:405650245 NCBI chr 7:45,699,649...46,244,460
Ensembl chr 7:43,815,785...44,357,803 		JBrowse link
G Tprg1l tumor protein p63 regulated 1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:170,004,577...170,007,784
Ensembl chr 5:164,710,285...164,725,425 		JBrowse link
G Trappc4 trafficking protein particle complex subunit 4 is_active_in ISO
IEA		 (PMID:11018053)
GO_REF:0000107		 RGD
Ensembl		 PMID:11018053 GO_REF:0000107 NCBI chr 8:44,729,458...44,733,285
Ensembl chr 8:44,725,331...44,733,491 		JBrowse link
G Trio trio Rho guanine nucleotide exchange factor is_active_in ISO
IEA		 (PMID:27907191)
GO_REF:0000107		 RGD
Ensembl		 PMID:27907191 GO_REF:0000107 NCBI chr 2:80,235,485...80,531,824
Ensembl chr 2:78,505,070...78,803,135 		JBrowse link
G Unc13a unc-13 homolog A located_in
is_active_in		 IDA
IEA
ISO		 PMID:22875941
GO_REF:0000044
(PMID:23658173)		 UniProt
RGD		 PMID:23658173 PMID:22875941 GO_REF:0000044, RGD:14390063 NCBI chr16:18,367,891...18,415,808
Ensembl chr16:18,336,229...18,381,872 		JBrowse link
G Unc13b unc-13 homolog B located_in ISO (PMID:22674279) RGD PMID:22674279 NCBI chr 5:62,084,809...62,299,884
Ensembl chr 5:57,289,227...57,502,926 		JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes is_active_in ISO
IEA		 (PMID:17027648)
GO_REF:0000107		 RGD
Ensembl		 PMID:17027648 GO_REF:0000107 NCBI chr 8:53,580,939...53,595,378
Ensembl chr 8:44,684,127...44,698,568 		JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 located_in ISO (PMID:25709106) RGD PMID:25709106 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568 		JBrowse link
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) is_active_in
located_in		 IDA
IBA		 GO_REF:0000033
PMID:9679147		 GO_Central
RGD		 PMID:11596050 PMID:9679147 GO_REF:0000033, RGD:9850129, RGD:69780 NCBI chr 8:117,663,447...117,754,412
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11596050 GO_REF:0000033, RGD:9850129 NCBI chr 4:20,646,604...21,005,171
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
extrinsic component of presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgki diacylglycerol kinase, iota is_active_in IDA PMID:21119615 SynGO PMID:21119615 RGD:8554416 NCBI chr 4:66,377,897...66,839,790
Ensembl chr 4:65,420,108...65,872,733 		JBrowse link
G Phb1 prohibitin 1 is_active_in IDA
EXP		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr10:81,102,043...81,114,815
Ensembl chr10:80,605,251...80,618,042 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in ISO (PMID:29606581) RGD PMID:29606581 NCBI chr 9:32,193,352...32,692,998
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
presynaptic active zone cytoplasmic component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) is_active_in IDA PMID:10340516
PMID:9679147		 SynGO PMID:10340516 PMID:9679147 RGD:13702152, RGD:69780 NCBI chr 8:117,663,447...117,754,412
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G Ctbp1 C-terminal binding protein 1 is_active_in ISO
IEA		 (PMID:22745816)
GO_REF:0000107		 RGD
Ensembl		 PMID:22745816 GO_REF:0000107 NCBI chr14:81,679,956...81,707,331
Ensembl chr14:77,455,696...77,482,821 		JBrowse link
G Ctbp2 C-terminal binding protein 2 is_active_in ISO
IEA		 (PMID:15728193), (PMID:22745816)
GO_REF:0000107		 RGD
Ensembl		 PMID:15728193 PMID:22745816 GO_REF:0000107 NCBI chr 1:197,208,536...197,348,802
Ensembl chr 1:187,782,682...187,920,222 		JBrowse link
G Ctnna2 catenin alpha 2 is_active_in ISO (PMID:8909549) RGD PMID:8909549 NCBI chr 4:110,852,265...112,001,351
Ensembl chr 4:109,293,978...110,443,522 		JBrowse link
G Ctnnb1 catenin beta 1 is_active_in ISO
IEA		 (PMID:8909549)
GO_REF:0000107		 RGD
Ensembl		 PMID:8909549 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ctnnd1 catenin delta 1 is_active_in IDA PMID:12727444 SynGO PMID:12727444 RGD:2316208 NCBI chr 3:90,090,025...90,141,247
Ensembl chr 3:69,683,313...69,734,516 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in IDA
IBA		 PMID:12391317
GO_REF:0000033		 GO_Central PMID:12391317 GO_REF:0000033, RGD:632516 NCBI chr 4:154,435,936...154,727,987
Ensembl chr 4:152,767,419...153,055,639 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in IDA
IEA
IBA
ISO		 PMID:12391317
GO_REF:0000107
GO_REF:0000033
(PMID:29439199)		 Ensembl
GO_Central
RGD		 PMID:29439199 PMID:12391317 GO_REF:0000033 GO_REF:0000107, RGD:632516 NCBI chr16:2,819,399...3,680,258
Ensembl chr16:2,848,620...3,670,776 		JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 is_active_in IDA PMID:12388603 SynGO PMID:12388603 RGD:12050093 NCBI chr 2:169,646,897...169,697,060
Ensembl chr 2:167,348,825...167,398,916 		JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 is_active_in ISO (PMID:19811534) RGD PMID:19811534 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584 		JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 is_active_in IDA PMID:21179518 SynGO PMID:21179518 RGD:4892203 NCBI chr19:47,619,853...47,964,089
Ensembl chr19:30,715,648...31,059,885 		JBrowse link
G Osbpl2 oxysterol binding protein-like 2 is_active_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:167,210,945...167,256,219
Ensembl chr 3:167,210,832...167,256,219 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA PMID:21712437
PMID:31959215		 SynGO PMID:21712437 PMID:31959215 RGD:9850098, RGD:155230771 NCBI chr 4:20,646,604...21,005,171
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 is_active_in ISO
IEA		 (PMID:29439199)
GO_REF:0000107		 RGD
Ensembl		 PMID:29439199 GO_REF:0000107 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798 		JBrowse link
G Rimbp2 RIMS binding protein 2 is_active_in ISO (PMID:27671655) RGD PMID:27671655 NCBI chr12:33,383,646...33,582,259
Ensembl chr12:27,747,980...27,956,763 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in IDA
IBA
ISO		 PMID:9252191
GO_REF:0000033
(PMID:27537483)
PMID:27462810		 GO_Central
RGD		 PMID:27537483 PMID:9252191 PMID:27462810 GO_REF:0000033, RGD:633897, RGD:13702367 NCBI chr 9:32,193,352...32,692,998
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in IDA
IBA		 PMID:9252191
GO_REF:0000033		 GO_Central PMID:9252191 GO_REF:0000033, RGD:633897 NCBI chr 7:72,133,004...72,644,059
Ensembl chr 7:70,243,872...70,757,491 		JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489 		JBrowse link
G Stxbp1 syntaxin binding protein 1 is_active_in ISO
IEA		 (PMID:32494600)
GO_REF:0000107		 RGD
Ensembl		 PMID:32494600 GO_REF:0000107 NCBI chr 3:36,474,428...36,536,120
Ensembl chr 3:16,076,391...16,138,369 		JBrowse link
presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2a adrenoceptor alpha 2A is_active_in IDA PMID:9596526 SynGO PMID:9596526 RGD:13702430 NCBI chr 1:263,066,780...263,069,580
Ensembl chr 1:253,060,218...253,064,365 		JBrowse link
G Afdn afadin, adherens junction formation factor is_active_in ISO (PMID:11827984) RGD PMID:11827984 NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:53,905,373...54,034,216 		JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 is_active_in ISO
IEA		 (PMID:10971649)
GO_REF:0000107		 RGD
Ensembl		 PMID:10971649 GO_REF:0000107 NCBI chr 1:230,790,297...230,995,986
Ensembl chr 1:221,363,778...221,566,553 		JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 is_active_in IDA
EXP		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr 7:35,622,267...35,731,904
Ensembl chr 7:33,735,871...33,843,295 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 is_active_in EXP
IDA		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr 4:148,450,207...148,763,653
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 is_active_in IDA
EXP		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A is_active_in IDA
ISO		 PMID:22683683
PMID:25533484
(PMID:15090043)		 RGD PMID:15090043 PMID:22683683 PMID:25533484 RGD:13702208, RGD:405650228 NCBI chr19:40,425,560...40,724,810
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D is_active_in ISO (PMID:16354915) RGD PMID:16354915 NCBI chr16:5,233,682...5,527,549
Ensembl chr16:5,228,306...5,668,215 		JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H is_active_in ISO (PMID:21358644) RGD PMID:21358644 NCBI chr10:14,894,630...14,952,317
Ensembl chr10:14,390,113...14,448,376 		JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 is_active_in IDA
IEA
ISO		 PMID:19339603
GO_REF:0000107
(PMID:30683685)		 Ensembl
RGD		 PMID:30683685 PMID:19339603 GO_REF:0000107, RGD:13702164 NCBI chr 4:19,902,324...20,330,287
Ensembl chr 4:18,951,002...19,374,969 		JBrowse link
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 is_active_in ISO
IEA		 (PMID:30683685)
GO_REF:0000107		 RGD
Ensembl		 PMID:30683685 GO_REF:0000107 NCBI chr 8:116,950,860...117,082,159
Ensembl chr 8:108,072,454...108,203,173 		JBrowse link
G Cacna2d3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 is_active_in ISO
IEA		 (PMID:30683685)
GO_REF:0000107		 RGD
Ensembl		 PMID:30683685 GO_REF:0000107 NCBI chr16:4,105,048...4,919,037
Ensembl chr16:4,098,445...4,912,351 		JBrowse link
G Canx calnexin is_active_in EXP
IDA		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr10:35,124,941...35,157,954
Ensembl chr10:34,625,191...34,656,821 		JBrowse link
G Cdh10 cadherin 10 is_active_in IDA PMID:29030434 SynGO PMID:29030434 RGD:13702213 NCBI chr 2:68,628,623...68,850,995
Ensembl chr 2:68,628,780...68,850,995 		JBrowse link
G Celsr3 cadherin, EGF LAG seven-pass G-type receptor 3 is_active_in ISO (PMID:34407949) RGD PMID:34407949 NCBI chr 8:118,409,136...118,438,593
Ensembl chr 8:109,530,641...109,558,354 		JBrowse link
G Cntnap2 contactin associated protein 2 is_active_in ISO (PMID:25707359) RGD PMID:25707359 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Cplx3 complexin 3 is_active_in ISO
IEA		 (PMID:15911881)
GO_REF:0000107		 RGD
Ensembl		 PMID:15911881 GO_REF:0000107 NCBI chr 8:66,899,438...66,906,200
Ensembl chr 8:58,003,535...58,010,297 		JBrowse link
G Flot2 flotillin 2 is_active_in EXP
IDA		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr10:63,424,084...63,445,811
Ensembl chr10:62,920,665...62,947,756 		JBrowse link
G Fzd3 frizzled class receptor 3 is_active_in ISO
IEA		 (PMID:34407949)
GO_REF:0000107		 RGD
Ensembl		 PMID:34407949 GO_REF:0000107 NCBI chr15:43,596,962...43,664,047
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 is_active_in IDA PMID:11168550 SynGO PMID:11168550 RGD:155230774 NCBI chr14:37,451,218...37,587,458
Ensembl chr14:37,097,279...37,228,944 		JBrowse link
G Gabra3 gamma-aminobutyric acid type A receptor subunit alpha 3 is_active_in IDA PMID:12732237 SynGO PMID:12732237 RGD:13702456 NCBI chr  X:155,301,979...155,543,870
Ensembl chr  X:150,261,607...150,501,559 		JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 is_active_in IDA PMID:15174078 SynGO PMID:15174078 RGD:155230705 NCBI chr14:36,434,339...36,917,920
Ensembl chr14:36,080,393...36,548,948 		JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 is_active_in IDA PMID:15174078 SynGO PMID:15174078 RGD:155230705 NCBI chr10:27,438,127...27,657,680
Ensembl chr10:26,936,551...27,151,251 		JBrowse link
G Gpm6a glycoprotein m6a is_active_in EXP
IDA		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr16:43,374,385...43,706,461
Ensembl chr16:36,641,284...36,973,475 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 is_active_in IDA PMID:15610164 SynGO PMID:15610164 RGD:13702224 NCBI chr10:41,710,540...42,030,105
Ensembl chr10:41,210,713...41,527,283 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 is_active_in IDA PMID:28057533 SynGO PMID:28057533 RGD:13702386 NCBI chr 2:168,247,490...168,367,616
Ensembl chr 2:165,947,521...166,069,510 		JBrowse link
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 is_active_in IDA PMID:12761821 SynGO PMID:12761821 RGD:13702231 NCBI chr  X:125,103,975...125,369,690
Ensembl chr  X:120,238,534...120,504,096 		JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 is_active_in IDA PMID:15610164 SynGO PMID:15610164 RGD:13702224 NCBI chr 8:9,845,421...10,320,021
Ensembl chr 8:1,562,119...2,034,979 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 is_active_in IDA PMID:23159309 SynGO PMID:23159309 RGD:13702288 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B is_active_in IDA PMID:23159309 SynGO PMID:23159309 RGD:13702288 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D is_active_in IDA PMID:23159309 SynGO PMID:23159309 RGD:13702288 NCBI chr 1:105,443,317...105,483,400
Ensembl chr 1:96,308,365...96,344,793 		JBrowse link
G Grin3b glutamate ionotropic receptor NMDA type subunit 3B is_active_in IDA PMID:23159309 SynGO PMID:23159309 RGD:13702288 NCBI chr 7:10,381,495...10,387,817
Ensembl chr 7:9,730,862...9,737,183 		JBrowse link
G Grm4 glutamate metabotropic receptor 4 located_in
is_active_in		 IDA
ISO		 PMID:11906782
(PMID:11906782), (PMID:32494600)		 RGD PMID:11906782 PMID:32494600 PMID:11906782 RGD:8554275 NCBI chr20:5,486,024...5,574,668
Ensembl chr20:5,481,124...5,572,821 		JBrowse link
G Grm7 glutamate metabotropic receptor 7 is_active_in IDA
IMP		 PMID:9295396
PMID:35511883
PMID:12183395		 SynGO PMID:9295396 PMID:35511883 PMID:35511883 PMID:12183395 RGD:13702410, RGD:405650215, RGD:405650215, RGD:728478 NCBI chr 4:145,286,714...146,169,099
Ensembl chr 4:143,731,259...144,612,344 		JBrowse link
G Grm8 glutamate metabotropic receptor 8 is_active_in IDA PMID:9295396 SynGO PMID:9295396 RGD:13702410 NCBI chr 4:56,771,247...57,696,951
Ensembl chr 4:55,805,955...56,730,831 		JBrowse link
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 is_active_in ISO
IEA		 (PMID:21358644)
GO_REF:0000107		 RGD
Ensembl		 PMID:21358644 GO_REF:0000107 NCBI chr 2:49,495,771...49,899,983
Ensembl chr 2:49,495,771...49,899,774 		JBrowse link
G Itga3 integrin subunit alpha 3 is_active_in ISO
IEA		 (PMID:28386022)
GO_REF:0000107		 RGD
Ensembl		 PMID:28386022 GO_REF:0000107 NCBI chr10:80,486,998...80,522,548
Ensembl chr10:79,990,161...80,022,118 		JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 is_active_in IDA PMID:17883401 SynGO PMID:17883401 RGD:155230746 NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 is_active_in IDA PMID:11739569 RGD
SynGO		 PMID:11739569 PMID:11739569 RGD:1581587, RGD:1581587 NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198 		JBrowse link
G Kctd12 potassium channel tetramerization domain containing 12 is_active_in ISO (PMID:33913808) RGD PMID:33913808 NCBI chr15:86,214,786...86,220,725
Ensembl chr15:79,801,191...79,806,282 		JBrowse link
G Kctd12b potassium channel tetramerization domain containing 12b is_active_in ISO
IEA		 (PMID:33913808)
GO_REF:0000107		 RGD
Ensembl		 PMID:33913808 GO_REF:0000107 NCBI chr  X:20,989,053...21,000,208
Ensembl chr  X:17,643,615...17,654,820 		JBrowse link
G Kctd8 potassium channel tetramerization domain containing 8 is_active_in ISO (PMID:33913808) RGD PMID:33913808 NCBI chr14:39,127,210...39,372,118
Ensembl chr14:38,773,634...39,017,554 		JBrowse link
G Lpar2 lysophosphatidic acid receptor 2 is_active_in ISO
IEA		 (PMID:19766573)
GO_REF:0000107		 RGD
Ensembl		 PMID:19766573 GO_REF:0000107 NCBI chr16:19,625,974...19,633,905
Ensembl chr16:19,595,655...19,599,998 		JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 is_active_in IDA
IBA		 PMID:18227064
GO_REF:0000033		 GO_Central PMID:18227064 GO_REF:0000033, RGD:13702403 NCBI chr 1:94,744,315...94,751,001
Ensembl chr 1:85,616,868...85,623,725 		JBrowse link
G Napa NSF attachment protein alpha is_active_in IDA PMID:11718992 SynGO PMID:11718992 RGD:13702225 NCBI chr 1:85,915,088...85,934,054
Ensembl chr 1:76,786,932...76,805,869 		JBrowse link
G Napb NSF attachment protein beta is_active_in IDA PMID:11718992 SynGO PMID:11718992 RGD:13702225 NCBI chr 3:156,585,394...156,632,418
Ensembl chr 3:136,133,428...136,179,345 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 is_active_in ISO
IEA		 (PMID:11827984)
GO_REF:0000107		 RGD
Ensembl		 PMID:11827984 GO_REF:0000107 NCBI chr 8:52,998,662...53,061,745
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G Nptn neuroplastin is_active_in IDA
EXP		 PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr 8:67,892,678...67,959,231
Ensembl chr 8:58,996,887...59,063,401 		JBrowse link
G Nrg1 neuregulin 1 is_active_in ISO (PMID:10686589) RGD PMID:10686589 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Nrxn1 neurexin 1 is_active_in ISO
IEA		 (PMID:17360903)
GO_REF:0000107		 RGD
Ensembl		 PMID:17360903 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Nrxn3 neurexin 3 is_active_in ISO
IEA		 (PMID:35550065)
GO_REF:0000107		 RGD
Ensembl		 PMID:35550065 GO_REF:0000107 NCBI chr 6:113,372,667...115,004,073
Ensembl chr 6:107,641,780...109,272,044 		JBrowse link
G Ntm neurotrimin is_active_in IDA PMID:12373100 SynGO PMID:12373100 RGD:2314481 NCBI chr 8:35,634,929...36,625,081
Ensembl chr 8:27,377,773...28,366,595 		JBrowse link
G Ntng1 netrin G1 is_active_in ISO
IEA		 (PMID:25411505)
GO_REF:0000107		 RGD
Ensembl		 PMID:25411505 GO_REF:0000107 NCBI chr 2:200,151,979...200,515,031
Ensembl chr 2:197,463,945...197,826,997 		JBrowse link
G Ntng2 netrin G2 is_active_in ISO
IEA		 (PMID:25411505)
GO_REF:0000107		 RGD
Ensembl		 PMID:25411505 GO_REF:0000107 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890 		JBrowse link
G Otof otoferlin is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:25609709)		 GO_Central
RGD		 PMID:25609709 GO_REF:0000033 NCBI chr 6:25,928,018...26,024,631
Ensembl chr 6:25,928,055...26,024,631 		JBrowse link
G P2rx1 purinergic receptor P2X 1 is_active_in IDA
IEP		 PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr10:58,117,107...58,132,167
Ensembl chr10:57,618,586...57,633,623 		JBrowse link
G P2rx2 purinergic receptor P2X 2 is_active_in IDA
IEP		 PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr12:51,999,107...52,002,627
Ensembl chr12:46,339,549...46,342,891 		JBrowse link
G P2ry1 purinergic receptor P2Y1 is_active_in IDA
IEP		 PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr 2:147,391,661...147,397,870
Ensembl chr 2:145,241,849...145,248,457 		JBrowse link
G P2ry2 purinergic receptor P2Y2 is_active_in IDA
IEP		 PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr 1:164,764,119...164,779,578
Ensembl chr 1:155,351,165...155,367,632 		JBrowse link
G P2ry4 pyrimidinergic receptor P2Y4 is_active_in IDA
IEP		 PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr  X:69,722,604...69,757,726
Ensembl chr  X:65,683,232...65,721,748 		JBrowse link
G Ryk receptor-like tyrosine kinase is_active_in ISO (PMID:34407949) RGD PMID:34407949 NCBI chr 8:112,298,158...112,370,912
Ensembl chr 8:103,419,275...103,491,698 		JBrowse link
G Scn8a sodium voltage-gated channel alpha subunit 8 is_active_in IDA PMID:10779552 SynGO PMID:10779552 RGD:13702270 NCBI chr 7:133,860,901...134,034,809
Ensembl chr 7:131,982,480...132,151,292 		JBrowse link
G Snap91 synaptosome associated protein 91 IDA RGD PMID:15558718 RGD:1600759 NCBI chr 8:96,618,039...96,732,763
Ensembl chr 8:87,738,824...87,852,367 		JBrowse link
G Stx11 syntaxin 11 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:9,111,216...9,140,227
Ensembl chr 1:7,289,976...7,320,164 		JBrowse link
G Stx1a syntaxin 1A is_active_in IDA PMID:26903802 SynGO PMID:26903802 RGD:12050133 NCBI chr12:27,278,517...27,306,547
Ensembl chr12:21,641,969...21,669,930 		JBrowse link
G Stx1b syntaxin 1B is_active_in ISO
IEA
IBA		 (PMID:23821748)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:23821748 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:191,846,016...191,864,878
Ensembl chr 1:182,415,546...182,441,280 		JBrowse link
G Stx2 syntaxin 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:33,315,447...33,350,788
Ensembl chr12:27,689,819...27,714,751 		JBrowse link
G Syt11 synaptotagmin 11 located_in
is_active_in		 IDA PMID:22960622 ParkinsonsUK-UCL
SynGO		 PMID:22960622 PMID:22960622 RGD:11079184, RGD:11079184 NCBI chr 2:176,503,845...176,530,354
Ensembl chr 2:174,206,191...174,231,964 		JBrowse link
G Tenm3 teneurin transmembrane protein 3 is_active_in ISO (PMID:35484136) RGD PMID:35484136 NCBI chr16:41,251,909...43,978,594
Ensembl chr16:41,252,182...43,978,594 		JBrowse link
G Vdac1 voltage-dependent anion channel 1 is_active_in EXP
IEP
IDA		 PMID:19187093 SynGO PMID:19187093 PMID:19187093 PMID:19187093 RGD:10003050, RGD:10003050, RGD:10003050 NCBI chr10:37,029,377...37,060,542
Ensembl chr10:36,532,244...36,559,640 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21364
    cellular anatomical structure 21069
      presynaptic active zone 137
        presynaptic active zone cytoplasmic component + 19
        presynaptic active zone dense projection 0
        presynaptic active zone membrane + 73
        presynaptic grid 0
Path 2
Term Annotations click to browse term
  cellular_component 21364
    cellular anatomical structure 21069
      cell junction 2605
        synapse 2001
          presynapse 896
            presynaptic active zone 137
              presynaptic active zone cytoplasmic component + 19
              presynaptic active zone dense projection 0
              presynaptic active zone membrane + 73
              presynaptic grid 0
paths to the root