ONTOLOGY REPORT - ANNOTATIONS
Term: mesenchymal cell differentiation
Accession: GO:0048762
browse the term
Definition: The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.
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Bmp2
bone morphogenetic protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:9693150)
UniProt RGD
PMID:9693150
GO_REF:0000024
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Bmp7
bone morphogenetic protein 7
involved_in
ISO
(PMID:9693150)
RGD
PMID:9693150
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:95523 (PMID:16442091)
RGD
PMID:16442091
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
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Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:95522 (PMID:16442091)
RGD
PMID:16442091
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO
MGI:1857869 (PMID:9635428)
RGD
PMID:9635428
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
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Hmga2
high mobility group AT-hook 2
involved_in
ISO ISS
(PMID:17624332), (PMID:7606786) GO_REF:0000024
RGD UniProt
PMID:7606786 PMID:17624332
GO_REF:0000024
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
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Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182246 (PMID:9000074)
RGD
PMID:9000074
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
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Nog
noggin
acts_upstream_of_or_within
IMP ISO
MGI:1862000 (PMID:18028901)
RGD
PMID:18028901 PMID:21238590
RGD:12801486
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
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Plaur
plasminogen activator, urokinase receptor
IMP
RGD
PMID:11798065
RGD:729659
NCBI chr 1:80,053,440...80,068,384
Ensembl chr 1:80,050,324...80,068,595
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Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
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Wwtr1
WW domain containing transcription regulator 1
acts_upstream_of_or_within
ISO
MGI:3759999 (PMID:17636028)
RGD
PMID:17636028
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
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Zfp64
zinc finger protein 64
involved_in
ISO
(PMID:18430783)
RGD
PMID:18430783
NCBI chr 3:157,666,819...157,695,774
Ensembl chr 3:157,633,211...157,695,809
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Sema3c
semaphorin 3C
involved_in
ISO
(PMID:26053665)
RGD
PMID:26053665
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
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Adam15
ADAM metallopeptidase domain 15
acts_upstream_of_or_within
ISO
(PMID:19156209)
RGD
PMID:19156209
NCBI chr 2:174,754,629...174,765,136
Ensembl chr 2:174,754,633...174,765,113
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Bmp2
bone morphogenetic protein 2
involved_in
ISO IEA
(PMID:18184661) GO_REF:0000107
RGD Ensembl
PMID:18184661
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(PMID:17303760)
RGD
PMID:17303760
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO
UniProtKB:Q9WV93 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
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Notch1
notch receptor 1
involved_in
ISO
(PMID:17303760)
RGD
PMID:17303760
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
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Rtn4
reticulon 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19156209)
Ensembl RGD
PMID:19156209
GO_REF:0000107
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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Tbx3
T-box transcription factor 3
involved_in
ISO
(PMID:22130515)
RGD
PMID:22130515
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
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Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10092230)
AgBase RGD
PMID:10092230
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
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Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:18184661)
RGD
PMID:18184661
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
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Wnt16
Wnt family member 16
acts_upstream_of_or_within
ISO
(PMID:19156209)
RGD
PMID:19156209
NCBI chr 4:50,820,968...50,831,380
Ensembl chr 4:50,820,968...50,831,380
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Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (PMID:20159597)
RGD
PMID:20159597
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2179740 (PMID:11694877)
RGD
PMID:11694877
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
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Mapk1
mitogen activated protein kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346859 (PMID:18952847)
Ensembl RGD
PMID:18952847
GO_REF:0000107
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
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Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (PMID:18952847)
RGD
PMID:18952847
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863
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Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589208 (PMID:21098571)
RGD
PMID:21098571
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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Hand2
heart and neural crest derivatives expressed 2
involved_in
ISO
(PMID:19008477)
RGD
PMID:19008477
NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
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Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19609448)
Ensembl RGD
PMID:19609448
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (PMID:18539270)
RGD
PMID:18539270
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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Ankrd11
ankyrin repeat domain containing 11
acts_upstream_of_or_within
ISO
(PMID:38951500)
RGD
PMID:38951500
NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962
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Cdc42
cell division cycle 42
involved_in
ISO
(PMID:31219639)
RGD
PMID:31219639
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
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Edn1
endothelin 1
involved_in
ISO
(PMID:31219639)
RGD
PMID:31219639
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
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Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857473|MGI:2687362 (PMID:31219639)
Ensembl RGD
PMID:31219639
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Folr1
folate receptor alpha
involved_in
ISO
(PMID:17286298)
RGD
PMID:17286298
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
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Hand2
heart and neural crest derivatives expressed 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386570|MGI:3803647 (PMID:20144608)
Ensembl RGD
PMID:20144608
GO_REF:0000107
NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
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Nrp1
neuropilin 1
NOT|involved_in
ISO
(PMID:26053665)
RGD
PMID:26053665
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Pitx2
paired-like homeodomain 2
involved_in
ISO
(PMID:12464179)
RGD
PMID:12464179
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (PMID:18539270)
RGD
PMID:18539270
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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Acvrl1
activin A receptor like type 1
NOT|involved_in
ISO
(PMID:12941632)
RGD
PMID:12941632
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
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Eng
endoglin
NOT|involved_in
ISO
(PMID:12941632)
RGD
PMID:12941632
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
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Has2
hyaluronan synthase 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10930438)
UniProt RGD
PMID:10930438
GO_REF:0000024
NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
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Efna1
ephrin A1
involved_in
ISO
(PMID:20960543)
RGD
PMID:20960543
NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1341884 (PMID:15680351)
RGD
PMID:15680351
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
MGI:1341800 (PMID:15680351)
RGD
PMID:15680351
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Akna
AT-hook transcription factor
involved_in
IBA ISO
GO_REF:0000033 (PMID:30787442)
GO_Central RGD
PMID:30787442
GO_REF:0000033
NCBI chr 5:76,777,415...76,824,380
Ensembl chr 5:76,777,415...76,816,017
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Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:16730346), (PMID:21983003) (PMID:15110716) (PMID:18184661)
UniProt RGD
PMID:15110716 PMID:16730346 PMID:18184661 PMID:21983003
GO_REF:0000024
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Cul7
cullin 7
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20139075)
UniProt Ensembl RGD
PMID:20139075
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:14,319,102...14,333,035
Ensembl chr 9:14,319,108...14,332,741
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Dact3
dishevelled-binding antagonist of beta-catenin 3
acts_upstream_of
ISO
MGI:5515616 (PMID:23580654)
RGD
PMID:23580654
NCBI chr 1:77,546,900...77,558,631
Ensembl chr 1:77,546,900...77,558,630
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Ddx17
DEAD-box helicase 17
involved_in
ISO
(PMID:24910439)
RGD
PMID:24910439
NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
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Ddx5
DEAD-box helicase 5
involved_in
ISO
(PMID:24910439)
RGD
PMID:24910439
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
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Dlg5
discs large MAGUK scaffold protein 5
involved_in
ISO
(PMID:28169360)
RGD
PMID:28169360
NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
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Epb41l5
erythrocyte membrane protein band 4.1 like 5
involved_in
ISO
MGI:3578147 (PMID:17507402), (PMID:18794329)
RGD
PMID:17507402 PMID:18794329
NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
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Fam83d
family with sequence similarity 83, member D
involved_in
ISO
(PMID:24344117)
RGD
PMID:24344117
NCBI chr 3:147,421,941...147,441,211
Ensembl chr 3:147,421,908...147,441,192
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Fgfr1
Fibroblast growth factor receptor 1
involved_in
ISO
(PMID:26451614)
RGD
PMID:26451614
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
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Fgfr2
fibroblast growth factor receptor 2
IDA
RGD
PMID:7803853
RGD:632663
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Flna
filamin A
acts_upstream_of_or_within
ISO
MGI:1923816 (PMID:21709252)
RGD
PMID:21709252
NCBI chr X:152,007,758...152,034,266
Ensembl chr X:152,007,758...152,031,052
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Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO IEA ISS
(PMID:15448698) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:15448698
GO_REF:0000024 GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
IEA ISO
GO_REF:0000107 (PMID:18037992)
Ensembl RGD
PMID:18037992
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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Hmga2
high mobility group AT-hook 2
involved_in
ISO ISS
(PMID:18832382) GO_REF:0000024
RGD UniProt
PMID:18832382
GO_REF:0000024
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
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Hnrnpab
heterogeneous nuclear ribonucleoprotein A/B
involved_in
ISO
(PMID:17273560)
RGD
PMID:17273560
NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
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Lef1
lymphoid enhancer binding factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:14691138)
Ensembl RGD
PMID:14691138
GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
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Lims1
LIM zinc finger domain containing 1
NOT|involved_in
ISO
(PMID:20926685)
RGD
PMID:20926685
NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
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Loxl2
lysyl oxidase-like 2
involved_in
ISO ISS IEA
(PMID:16096638) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:16096638
GO_REF:0000024 GO_REF:0000107
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
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Loxl3
lysyl oxidase-like 3
involved_in
ISO
(PMID:16096638)
RGD
PMID:16096638
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
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Mir326
microRNA 326
involved_in
ISO
(PMID:24279830)
RGD
PMID:24279830
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
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Msx1
msh homeobox 1
involved_in
ISO
(PMID:11023873)
RGD
PMID:11023873
NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
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Ncam1
neural cell adhesion molecule 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:28098160)
UniProt RGD
PMID:28098160
GO_REF:0000024
NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
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Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (PMID:15339668)
RGD
PMID:15339668
NCBI chr18:74,046,422...74,156,041
Ensembl chr18:74,046,904...74,156,028
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Nog
noggin
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:17218603) GO_REF:0000024
Ensembl RGD UniProt
PMID:17218603
GO_REF:0000024 GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
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Notch1
notch receptor 1
involved_in acts_upstream_of_or_within
ISO
(PMID:17984306) MGI:1857230 (PMID:14701881)
RGD
PMID:14701881 PMID:17984306
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Notch4
notch receptor 4
involved_in
ISO
(PMID:17984306)
RGD
PMID:17984306
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
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Ppp3r1
protein phosphatase 3, regulatory subunit B, alpha
acts_upstream_of_or_within
ISO
MGI:3044031 (PMID:15339668)
RGD
PMID:15339668
NCBI chr14:91,556,743...91,606,391
Ensembl chr14:91,604,121...91,606,907
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1857411 (PMID:14701881)
RGD
PMID:14701881
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
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Rflnb
refilin B
acts_upstream_of_or_within
ISO
MGI:95556 (PMID:21709252)
RGD
PMID:21709252
NCBI chr10:60,893,693...60,899,970
Ensembl chr10:60,893,713...60,899,976
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Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P70336 (PMID:15464581)
Ensembl RGD
PMID:15464581
GO_REF:0000107
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
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Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
ISO
UniProtKB:P70335 (PMID:15464581)
RGD
PMID:15464581
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
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Sdhaf2
succinate dehydrogenase complex assembly factor 2
acts_upstream_of
ISO
(PMID:23983127)
RGD
PMID:23983127
NCBI chr 1:207,139,070...207,167,830
Ensembl chr 1:207,139,112...207,168,616
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Slc39a10
solute carrier family 39 member 10
involved_in
ISO
(PMID:27274087) (PMID:28098160)
RGD
PMID:27274087 PMID:28098160
NCBI chr 9:54,836,841...54,960,325
Ensembl chr 9:54,876,141...54,960,325
G
Slc39a6
solute carrier family 39 member 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:28098160) (PMID:23919497)
UniProt RGD
PMID:23919497 PMID:28098160
GO_REF:0000024
NCBI chr18:15,864,874...15,885,417
Ensembl chr18:15,864,875...15,885,417
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Smad4
SMAD family member 4
involved_in
ISO
UniProtKB:Q13485 (PMID:23221074), (PMID:30741461)
RGD
PMID:23221074 PMID:30741461
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
TAS ISO
(PMID:10655586), (PMID:11689706), (PMID:18832382) (PMID:16096638)
RGD
PMID:10655586 PMID:11689706 PMID:16096638 PMID:18832382 PMID:15155580
RGD:1302246
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Snai2
snail family transcriptional repressor 2
involved_in acts_upstream_of_or_within
ISO
(PMID:17984306), (PMID:9182671) (PMID:9182671) MGI:2447175 (PMID:17916597)
RGD
PMID:9182671 PMID:17916597 PMID:17984306
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2429649 (PMID:15096597)
UniProt RGD
PMID:15096597
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Sp6
Sp6 transcription factor
involved_in
ISO
(PMID:30504223)
RGD
PMID:30504223
NCBI chr10:82,005,518...82,009,699
Ensembl chr10:82,005,294...82,011,013
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of acts_upstream_of_or_within involved_in
IDA ISO
(PMID:28373289) (PMID:29529050) (PMID:25893292)
RGD
PMID:25893292 PMID:28373289 PMID:29529050 PMID:10504497
RGD:1578678
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10092230), (PMID:18223299)
AgBase RGD
PMID:10092230 PMID:18223299
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO IEA
(PMID:15761148) GO_REF:0000107
RGD Ensembl
PMID:15761148
GO_REF:0000107
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:28131417)
Ensembl RGD
PMID:28131417
GO_REF:0000107
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO IBA
(PMID:18184661) GO_REF:0000033
RGD GO_Central
PMID:18184661
GO_REF:0000033
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
G
Tgfbr3l
transforming growth factor beta receptor 3 like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:2,600,874...2,604,211
Ensembl chr12:2,600,934...2,604,222
G
Trim28
tripartite motif-containing 28
involved_in
ISS ISO
GO_REF:0000024 (PMID:17273560)
HGNC-UCL RGD
PMID:17273560
GO_REF:0000024
NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
G
Trip10
thyroid hormone receptor interactor 10
IMP
RGD
PMID:23819628
RGD:11535143
NCBI chr 9:2,133,085...2,147,795
Ensembl chr 9:2,133,671...2,147,799
G
Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
MGI:98958 (PMID:25813538)
RGD
PMID:25813538
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
G
Wnt4
Wnt family member 4
involved_in
ISO IEA
(PMID:12841867) GO_REF:0000107
RGD Ensembl
PMID:12841867
GO_REF:0000107
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(PMID:12841867)
RGD
PMID:12841867
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Mir21
microRNA 21
involved_in
ISO
(PMID:23441172)
RGD
PMID:23441172
NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
G
Pdcd4
programmed cell death 4
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172
RGD:10400865
NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172
RGD:10400865
NCBI chr 2:120,557,256...120,561,917
Ensembl chr 2:120,556,706...120,566,189
G
Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(PMID:18924235)
RGD
PMID:18924235
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within involved_in
ISO
(PMID:21364285) (PMID:19509466)
RGD
PMID:19509466 PMID:21364285
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1860511 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
acts_upstream_of_or_within
ISO
MGI:1341800 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:97169 (PMID:18667074)
RGD
PMID:18667074
NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
G
Msx2
msh homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97168 (PMID:18667074)
Ensembl RGD
PMID:18667074
GO_REF:0000107
NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:14701881)
RGD
PMID:14701881
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:14701881)
RGD
PMID:14701881
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO
UniProtKB:Q3UZ96 (PMID:18663143)
RGD
PMID:18663143
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within involved_in
ISO
MGI:2447175 (PMID:18663143)
RGD
PMID:18663143
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
G
Tmem100
transmembrane protein 100
acts_upstream_of_or_within
ISO
MGI:5432904 (PMID:25318679)
RGD
PMID:25318679
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
G
Alx1
ALX homeobox 1
acts_upstream_of_or_within
ISO
MGI:1857553 (PMID:8673125)
RGD
PMID:8673125
NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
G
Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2156165 (PMID:8623928)
Ensembl RGD
PMID:8623928
GO_REF:0000107
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Foxc1
forkhead box C1
involved_in
ISO
(PMID:24590069)
RGD
PMID:24590069
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(PMID:17303760)
RGD
PMID:17303760
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO
UniProtKB:Q9WV93 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:17303760)
RGD
PMID:17303760
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tbx20
T-box transcription factor 20
involved_in
ISO
(PMID:21983003)
RGD
PMID:21983003
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:20404326)
RGD
PMID:20404326
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Mir222
microRNA 222
IMP
RGD
PMID:31691506
RGD:151893486
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Ranbp3l
RAN binding protein 3-like
involved_in
ISO
(PMID:25755279)
RGD
PMID:25755279
NCBI chr 2:58,057,887...58,113,158
Ensembl chr 2:58,058,263...58,113,172
G
Timp3
TIMP metallopeptidase inhibitor 3
IMP
RGD
PMID:31691506
RGD:151893486
NCBI chr 7:17,520,827...17,571,850
Ensembl chr 7:17,521,919...17,571,839
G
Amer1
APC membrane recruitment protein 1
acts_upstream_of_or_within
ISO
MGI:2446599|MGI:5086003 (PMID:21571217)
RGD
PMID:21571217
NCBI chr X:60,300,595...60,316,480
Ensembl chr X:60,295,751...60,316,440
G
Six2
SIX homeobox 2
involved_in
ISO
(PMID:17036046)
RGD
PMID:17036046
NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:95523 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:1099809 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Chrd
chordin
involved_in
ISO
(PMID:11969257)
RGD
PMID:11969257
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Eomes
eomesodermin
involved_in
ISO
(PMID:18171685)
RGD
PMID:18171685
NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
G
Tasor
transcription activation suppressor
involved_in
ISO
(PMID:28839193)
RGD
PMID:28839193
NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101948 (PMID:25813538)
Ensembl RGD
PMID:25813538
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:16368682)
UniProt RGD
PMID:16368682
GO_REF:0000024
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Tcf21
transcription factor 21
involved_in
ISS ISO
GO_REF:0000024 (PMID:12619136)
UniProt RGD
PMID:12619136
GO_REF:0000024
NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
G
Mir19a
microRNA 19a
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Adipor1
adiponectin receptor 1
involved_in
ISO
(PMID:23776679)
RGD
PMID:23776679
NCBI chr13:45,859,461...45,879,248
Ensembl chr13:45,859,533...45,879,241
G
Bckdk
branched chain ketoacid dehydrogenase kinase
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633
G
Dab2ip
DAB2 interacting protein
involved_in
ISO IEA ISS
(PMID:20080667), (PMID:20154697) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20080667 PMID:20154697
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
G
Dact3
dishevelled-binding antagonist of beta-catenin 3
acts_upstream_of_or_within
ISO
MGI:5515616 (PMID:23580654)
RGD
PMID:23580654
NCBI chr 1:77,546,900...77,558,631
Ensembl chr 1:77,546,900...77,558,630
G
Dsg2
desmoglein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:29910125)
Ensembl RGD
PMID:29910125
GO_REF:0000107
NCBI chr18:11,846,207...11,904,630
Ensembl chr18:11,846,183...11,904,156
G
Efna1
ephrin A1
involved_in
ISO
(PMID:20960543)
RGD
PMID:20960543
NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866
G
Epha4
Eph receptor A4
involved_in
ISO
(PMID:29093007)
RGD
PMID:29093007
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Fbxo11
F-box protein 11
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:25827072)
UniProt Ensembl RGD
PMID:25827072
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:6,486,761...6,562,664
Ensembl chr 6:6,486,015...6,562,662
G
Foxa1
forkhead box A1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20160041)
Ensembl RGD
PMID:20160041
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxa2
forkhead box A2
involved_in
IEA ISO
GO_REF:0000107 (PMID:20160041)
Ensembl RGD
PMID:20160041
GO_REF:0000107
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Gata3
GATA binding protein 3
acts_upstream_of
ISO
(PMID:26451614)
RGD
PMID:26451614
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15448698), (PMID:25827072), (PMID:29059170)
UniProt Ensembl RGD
PMID:15448698 PMID:25827072 PMID:29059170
GO_REF:0000024 GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Hpn
hepsin
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (PMID:19843851)
UniProt GO_Central Ensembl RGD
PMID:19843851
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
G
Il17rd
interleukin 17 receptor D
involved_in
ISO
(PMID:25576668)
RGD
PMID:25576668
NCBI chr16:2,228,438...2,295,122
Ensembl chr16:2,228,287...2,292,556
G
Kat8
lysine acetyltransferase 8
involved_in
ISO IEA ISS
(PMID:27292636) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27292636
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
G
Ldlrad4
low density lipoprotein receptor class A domain containing 4
involved_in
ISO
(PMID:24627487)
RGD
PMID:24627487
NCBI chr18:61,519,253...61,848,403
Ensembl chr18:61,521,428...61,843,238
G
Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:19443654)
RGD
PMID:19443654
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
G
Mark1
microtubule affinity regulating kinase 1
involved_in
ISO IEA
(PMID:31281935) GO_REF:0000107
RGD Ensembl
PMID:31281935
GO_REF:0000107
NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173
G
Mir130a
microRNA 130a
acts_upstream_of
ISO
UniProtKB:Q13485 (PMID:30741461)
RGD
PMID:30741461
NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629
G
Mir142
microRNA 142
involved_in
ISO
UniProtKB:P01137 (PMID:26572508)
RGD
PMID:26572508
NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967
G
Mir144
microRNA 144
acts_upstream_of
ISO
(PMID:27785072)
RGD
PMID:27785072
NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
G
Mir145
microRNA 145
acts_upstream_of
ISO
(PMID:24384875)
RGD
PMID:24384875
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
G
Mir18a
microRNA 18a
involved_in
ISO
(PMID:28131417)
RGD
PMID:28131417
NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860
G
Mir202
microRNA 202
acts_upstream_of
ISO
UniProtKB:P01137 (PMID:28373289)
RGD
PMID:28373289
NCBI chr 1:194,754,730...194,754,801
Ensembl chr 1:194,754,730...194,754,801
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Mir204
microRNA 204
involved_in
ISO
UniProtKB:Q13485 (PMID:23221074)
RGD
PMID:23221074
NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
G
Mir295-1
microRNA 295-1
involved_in
ISO
UniProtKB:P01137 (PMID:21490602)
RGD
PMID:21490602
NCBI chr 1:65,962,566...65,962,646
Ensembl chr 1:65,962,566...65,962,646
G
Mir29b1
microRNA 29b-1
involved_in
ISO
(PMID:25032858)
RGD
PMID:25032858
NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
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Mir29b2
microRNA 29b-2
involved_in
ISO
(PMID:25032858)
RGD
PMID:25032858
NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
G
Mir31
microRNA 31
IMP
RGD
PMID:23270756
RGD:13210526
NCBI chr 5:103,599,038...103,599,143
G
Nkx2-1
NK2 homeobox 1
involved_in
ISO IEA
(PMID:19293183) GO_REF:0000107
RGD Ensembl
PMID:19293183
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Ovol2
ovo-like zinc finger 2
involved_in
ISO
(PMID:24735879), (PMID:28455959)
RGD
PMID:24735879 PMID:28455959
NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
G
Ppp2ca
protein phosphatase 2 catalytic subunit alpha
involved_in
ISO
(PMID:20080667)
RGD
PMID:20080667
NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:27919618)
RGD
PMID:27919618
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Sdhaf2
succinate dehydrogenase complex assembly factor 2
acts_upstream_of_or_within
ISO
(PMID:23983127)
RGD
PMID:23983127
NCBI chr 1:207,139,070...207,167,830
Ensembl chr 1:207,139,112...207,168,616
G
Sfrp1
secreted frizzled-related protein 1
involved_in
ISO IEA
(PMID:19095296) GO_REF:0000107
RGD Ensembl
PMID:19095296
GO_REF:0000107
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO
(PMID:19095296)
RGD
PMID:19095296
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Spred1
sprouty-related, EVH1 domain containing 1
involved_in
ISO
(PMID:25576668)
RGD
PMID:25576668
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
G
Spred2
sprouty-related, EVH1 domain containing 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:25576668)
UniProt RGD
PMID:25576668
GO_REF:0000024
NCBI chr14:94,149,210...94,250,787
Ensembl chr14:94,148,837...94,249,162
G
Spred3
sprouty-related, EVH1 domain containing 3
involved_in
ISO
(PMID:25576668)
RGD
PMID:25576668
NCBI chr 1:84,458,779...84,470,425
Ensembl chr 1:84,459,314...84,470,249
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
ISO
(PMID:25576668)
RGD
PMID:25576668
NCBI chr 2:120,557,256...120,561,917
Ensembl chr 2:120,556,706...120,566,189
G
Spry2
sprouty RTK signaling antagonist 2
involved_in
ISO
(PMID:25576668)
RGD
PMID:25576668
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Spsb3
splA/ryanodine receptor domain and SOCS box containing 3
involved_in
ISO
(PMID:29059170)
RGD
PMID:29059170
NCBI chr10:13,907,175...13,912,841
Ensembl chr10:13,907,253...13,912,841
G
Tgfbr3
transforming growth factor beta receptor 3
acts_upstream_of_or_within
ISO
(PMID:17823118)
RGD
PMID:17823118
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
G
Trim62
tripartite motif-containing 62
acts_upstream_of_or_within
ISO
MGI:5538538 (PMID:24890125)
RGD
PMID:24890125
NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:20813961
RGD:11568680
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Usf3
upstream transcription factor family member 3
involved_in
ISO IBA
(PMID:28011713) GO_REF:0000033
RGD GO_Central
PMID:28011713
GO_REF:0000033
NCBI chr11:56,470,738...56,529,736
Ensembl chr11:56,476,122...56,529,884
G
Vasn
vasorin
involved_in
ISO
(PMID:21170088)
RGD
PMID:21170088
NCBI chr10:10,917,750...10,928,259
Ensembl chr10:10,917,605...10,928,357
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(PMID:23863481)
RGD
PMID:23863481
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Znf750
zinc finger protein 750
involved_in
ISO
(PMID:32042337)
RGD
PMID:32042337
NCBI chr10:106,772,162...106,781,186
Ensembl chr10:106,772,669...106,781,200
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(PMID:19161227)
RGD
PMID:19161227
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Fuz
fuzzy planar cell polarity protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:23806618)
UniProt RGD
PMID:23806618
GO_REF:0000024
NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
MGI:1096359|MGI:1857891|MGI:2679699 (PMID:16368932), (PMID:17067568)
RGD
PMID:16368932 PMID:17067568
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
G
Arb2a
ARB2 cotranscriptional regulator A
involved_in
ISO
(PMID:29311329)
RGD
PMID:29311329
NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
(PMID:19793887)
RGD
PMID:19793887
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Cdh2
cadherin 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:26750727) GO_REF:0000024
Ensembl RGD UniProt
PMID:26750727
GO_REF:0000024 GO_REF:0000107
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
G
Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:2679699 (PMID:17067568)
RGD
PMID:17067568
NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204
G
Cyp26c1
cytochrome P450, family 26, subfamily C, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:1096359 (PMID:17067568)
RGD
PMID:17067568
NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842
G
Edn1
endothelin 1
acts_upstream_of_or_within
ISO
MGI:1857637 (PMID:15327783), (PMID:9671575)
RGD
PMID:9671575 PMID:15327783
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
acts_upstream_of_or_within
ISO
MGI:1857473 (PMID:15306564), (PMID:15327783), (PMID:9449664)
RGD
PMID:9449664 PMID:15306564 PMID:15327783
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO
MGI:1347481 (PMID:16839542)
RGD
PMID:16839542
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (PMID:16839542)
RGD
PMID:16839542
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO
MGI:1857639 (PMID:9671575)
RGD
PMID:9671575
NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
G
Kbtbd8
kelch repeat and BTB domain containing 8
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26399832) GO_REF:0000107
UniProt RGD Ensembl
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:127,675,967...127,688,785
Ensembl chr 4:127,676,141...127,687,697
G
Klhl12
kelch-like family member 12
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27716508)
UniProt Ensembl RGD
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
G
Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO
MGI:1346859 (PMID:18952847)
RGD
PMID:18952847
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (PMID:18952847)
RGD
PMID:18952847
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863
G
Nolc1
nucleolar and coiled-body phosphoprotein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26399832)
UniProt Ensembl RGD
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
G
Pdcd6
programmed cell death 6
involved_in
ISO ISS
(PMID:27716508) GO_REF:0000024
RGD UniProt
PMID:27716508
GO_REF:0000024
NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
G
Pef1
penta-EF hand domain containing 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27716508)
UniProt Ensembl RGD
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
G
Rdh10
retinol dehydrogenase 10
acts_upstream_of_or_within
ISO
(PMID:17473173)
RGD
PMID:17473173
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
G
Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:12444107)
RGD
PMID:12444107
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
G
Sox8
SRY-box transcription factor 8
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:3041881 (PMID:15691760)
RGD
PMID:15691760
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tcof1
treacle ribosome biogenesis factor 1
involved_in
ISO
(PMID:26399832)
RGD
PMID:26399832
NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324
G
Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:2176682 (PMID:8622766)
RGD
PMID:8622766
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637 (PMID:23933587)
RGD
PMID:23933587
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
ISO
MGI:102780|MGI:2687362|MGI:3773698|MGI:4867385 (PMID:19185569), (PMID:23933587), (PMID:28455376)
RGD
PMID:19185569 PMID:23933587 PMID:28455376
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:26295701)
RGD
PMID:26295701
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Frzb
frizzled-related protein
involved_in
ISO
(PMID:10654605)
RGD
PMID:10654605
NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
G
Htr2b
5-hydroxytryptamine receptor 2B
involved_in
ISS ISO
GO_REF:0000024 (PMID:9165122)
UniProt RGD
PMID:9165122
GO_REF:0000024
NCBI chr 9:86,735,793...86,756,638
Ensembl chr 9:86,742,102...86,755,108
G
Lrp6
LDL receptor related protein 6
involved_in
ISO
(PMID:11029007)
RGD
PMID:11029007
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:21610032)
UniProt RGD
PMID:21610032
GO_REF:0000024
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Otud5
OTU deubiquitinase 5
involved_in
ISO IEA ISS
(PMID:33523931) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:33523931
GO_REF:0000024 GO_REF:0000107
NCBI chr X:14,626,173...14,659,331
Ensembl chr X:14,626,164...14,659,573
G
Rps7
ribosomal protein S7
acts_upstream_of_or_within
ISO
MGI:3043039 (PMID:15384171)
RGD
PMID:15384171
NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145 Ensembl chr 5:45,223,980...45,271,145
G
Six1
SIX homeobox 1
involved_in
ISO
MGI:105923 (PMID:28455376)
RGD
PMID:28455376
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Smad4
SMAD family member 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19793887)
Ensembl RGD
PMID:19793887
GO_REF:0000107
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Wnt10a
Wnt family member 10A
acts_upstream_of_or_within
ISO
(PMID:17286598)
RGD
PMID:17286598
NCBI chr 9:76,349,931...76,362,400
Ensembl chr 9:76,349,931...76,362,400
G
Zic2
Zic family member 2
acts_upstream_of_or_within
ISO
MGI:1862004 (PMID:15384171)
RGD
PMID:15384171
NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
G
Zic5
Zic family member 5
acts_upstream_of_or_within
ISO
MGI:3052154 (PMID:15136147)
RGD
PMID:15136147
NCBI chr15:99,558,285...99,567,023
Ensembl chr15:99,560,323...99,567,035
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637 (PMID:23933587)
RGD
PMID:23933587
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857473|MGI:3773698|MGI:4867385 (PMID:17294360), (PMID:23933587)
Ensembl RGD
PMID:17294360 PMID:23933587
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Sfrp1
secreted frizzled-related protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3045799 (PMID:20130188)
Ensembl RGD
PMID:20130188
GO_REF:0000107
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Gsc
goosecoid homeobox
involved_in
ISO
(PMID:24290375)
RGD
PMID:24290375
NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111
G
Acvr1
activin A receptor type 1
acts_upstream_of_or_within
ISO
MGI:2651395 (PMID:15226263)
RGD
PMID:15226263
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Ankrd11
ankyrin repeat domain containing 11
acts_upstream_of_or_within
ISO
(PMID:38951500)
RGD
PMID:38951500
NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962
G
Cfl1
cofilin 1
acts_upstream_of_or_within
ISO
MGI:3574399 (PMID:15649475)
RGD
PMID:15649475
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Coro1c
coronin 1C
involved_in
ISO IBA
(PMID:25074804) GO_REF:0000033
RGD GO_Central
PMID:25074804
GO_REF:0000033
NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
G
Edn3
endothelin 3
acts_upstream_of_or_within
ISO
MGI:1856392 (PMID:9624616)
RGD
PMID:9624616
NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
G
Ednrb
endothelin receptor type B
acts_upstream_of_or_within
ISO
(PMID:10591209)
RGD
PMID:10591209
NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
G
Efnb1
ephrin B1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3039290 (PMID:15037550)
Ensembl RGD
PMID:15037550
GO_REF:0000107
NCBI chr X:64,257,351...64,270,158
Ensembl chr X:64,257,351...64,270,157
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:10655590) GO_REF:0000107
UniProt RGD Ensembl
PMID:10655590
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
Fgf19
fibroblast growth factor 19
acts_upstream_of_or_within
ISO
MGI:3044957 (PMID:15789410)
RGD
PMID:15789410
NCBI chr 1:200,056,526...200,060,980
Ensembl chr 1:200,056,644...200,060,287
G
Gbx2
gastrulation brain homeobox 2
acts_upstream_of_or_within
ISO
MGI:1857634 (PMID:15996652), (PMID:19700621), (PMID:23144817)
RGD
PMID:15996652 PMID:19700621 PMID:23144817
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
G
Gdnf
glial cell derived neurotrophic factor
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15242795)
UniProt Ensembl RGD
PMID:15242795
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179429 (PMID:14659802)
Ensembl RGD
PMID:14659802
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Htr2b
5-hydroxytryptamine receptor 2B
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:9165122) GO_REF:0000024
Ensembl RGD UniProt
PMID:9165122
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:86,735,793...86,756,638
Ensembl chr 9:86,742,102...86,755,108
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108075 (PMID:16687132)
Ensembl RGD
PMID:16687132
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Kitlg
KIT ligand
acts_upstream_of_or_within
ISO
(PMID:11401406)
RGD
PMID:11401406
NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
G
Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
MGI:1934917 (PMID:16316641)
RGD
PMID:16316641
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Nrp1
neuropilin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrtn
neurturin
acts_upstream_of_or_within
ISO
(PMID:15242795)
RGD
PMID:15242795
NCBI chr 9:1,581,860...1,587,835
Ensembl chr 9:1,581,975...1,583,102
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3522498 (PMID:16423343)
RGD
PMID:16423343
NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
G
Pax3
paired box 3
acts_upstream_of_or_within
ISO
MGI:3043030 (PMID:15384171)
RGD
PMID:15384171
NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
G
Pax6
paired box 6
IMP
RGD
PMID:9079035
RGD:8552342
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Phactr4
phosphatase and actin regulator 4
involved_in
IBA ISO
GO_REF:0000033 (PMID:22215812)
GO_Central RGD
PMID:22215812
GO_REF:0000033
NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865
G
Radil
Rap associating with DIL domain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:12,024,395...12,088,540
Ensembl chr12:12,024,395...12,088,540
G
Ret
ret proto-oncogene
acts_upstream_of_or_within
ISO
MGI:2449909 (PMID:15242795)
RGD
PMID:15242795
NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
G
Sema3a
semaphorin 3A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3b
semaphorin 3B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,271,663...108,280,326
Ensembl chr 8:108,271,666...108,282,919
G
Sema3c
semaphorin 3C
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2150759 (PMID:11688556)
GO_Central RGD
PMID:11688556
GO_REF:0000033
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Sema3d
semaphorin 3D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930
G
Sema3e
semaphorin 3E
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
G
Sema3f
semaphorin 3F
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
G
Sema3g
semaphorin 3G
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
G
Sema4a
semaphorin 4A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
G
Sema4b
semaphorin 4B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:134,136,646...134,177,777
Ensembl chr 1:134,149,536...134,177,775
G
Sema4c
semaphorin 4C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
G
Sema4d
semaphorin 4D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Sema4f
semaphorin 4F
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Sema4g
semaphorin 4G
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:243,849,979...243,865,343
Ensembl chr 1:243,853,854...243,865,341
G
Sema5a
semaphorin 5A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Sema5b
semaphorin 5B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311
G
Sema6a
semaphorin 6A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Sema6b
semaphorin 6B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
G
Sema6c
semaphorin 6C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
G
Sema6d
semaphorin 6D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857796 (PMID:15936751)
UniProt RGD
PMID:15936751
GO_REF:0000024
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101791 (PMID:16687132)
Ensembl RGD
PMID:16687132
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Sox10
SRY-box transcription factor 10
involved_in
IBA ISO
GO_REF:0000033 (PMID:15572147)
GO_Central RGD
PMID:15572147
GO_REF:0000033
NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544
G
Sox8
SRY-box transcription factor 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:15572147)
UniProt RGD
PMID:15572147
GO_REF:0000024
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179190|MGI:2179191 (PMID:15652707), (PMID:20501333)
UniProt RGD
PMID:15652707 PMID:20501333
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387501 (PMID:12522767)
RGD
PMID:12522767
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Fn1
fibronectin 1
involved_in
ISO IEA
(PMID:26571399) GO_REF:0000107
RGD Ensembl
PMID:26571399
GO_REF:0000107
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:18356247), (PMID:19325129), (PMID:19386662)
RGD
PMID:18356247 PMID:19325129 PMID:19386662
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:18356247), (PMID:19386662)
Ensembl RGD
PMID:18356247 PMID:19386662
GO_REF:0000107
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Phox2b
paired-like homeobox 2b
involved_in
ISO
(PMID:10360575)
RGD
PMID:10360575
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
G
Sema3a
semaphorin 3A
involved_in
ISO
(PMID:18356247), (PMID:19325129), (PMID:19386662)
RGD
PMID:18356247 PMID:19325129 PMID:19386662
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
involved_in
ISO
(PMID:19386662)
RGD
PMID:19386662
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
G
Folr1
folate receptor alpha
involved_in
ISO
(PMID:17286298)
RGD
PMID:17286298
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
G
Sema3a
semaphorin 3A
involved_in
ISO
(PMID:19325129)
RGD
PMID:19325129
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Chrd
chordin
involved_in
ISO
MGI:2157350 (PMID:17685487)
RGD
PMID:17685487
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Kbtbd8
kelch repeat and BTB domain containing 8
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26399832)
UniProt Ensembl RGD
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:127,675,967...127,688,785
Ensembl chr 4:127,676,141...127,687,697
G
Klhl12
kelch-like family member 12
involved_in
ISO ISS IEA
(PMID:27716508) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
G
Lrp6
LDL receptor related protein 6
involved_in
ISO
(PMID:11029007)
RGD
PMID:11029007
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
G
Nolc1
nucleolar and coiled-body phosphoprotein 1
involved_in
ISO IEA ISS
(PMID:26399832) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
G
Pdcd6
programmed cell death 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:27716508)
UniProt RGD
PMID:27716508
GO_REF:0000024
NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
G
Pef1
penta-EF hand domain containing 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27716508)
UniProt Ensembl RGD
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
G
Polr1b
RNA polymerase I subunit B
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379
G
Tcof1
treacle ribosome biogenesis factor 1
involved_in
ISO
(PMID:26399832)
RGD
PMID:26399832
NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324
G
Gata5
GATA binding protein 5
involved_in
ISO
(PMID:21633169)
RGD
PMID:21633169
NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
G
Mir342
microRNA 342
involved_in
ISO
(PMID:26857067)
RGD
PMID:26857067
NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
G
Acvr1
activin A receptor type 1
involved_in
ISO
(PMID:16140292)
RGD
PMID:16140292
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Emp2
epithelial membrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:30773261)
UniProt RGD
PMID:30773261
GO_REF:0000024
NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
G
Jag1
jagged canonical Notch ligand 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Notch1
notch receptor 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(PMID:22186728)
RGD
PMID:22186728
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P21275 (PMID:23863481)
RGD
PMID:23863481
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Sema3c
semaphorin 3C
involved_in
ISO
(PMID:26053665)
RGD
PMID:26053665
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:20804746)
RGD
PMID:20804746
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Adam8
ADAM metallopeptidase domain 8
involved_in
ISO
(PMID:34615811)
RGD
PMID:34615811
NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
G
Ager
advanced glycosylation end product-specific receptor
IMP
RGD
PMID:21743278
RGD:7243870
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
G
Agt
angiotensinogen
involved_in
ISS ISO
GO_REF:0000024 (PMID:34615811)
UniProt RGD
PMID:34615811
GO_REF:0000024
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Alx1
ALX homeobox 1
involved_in
ISO IEA ISS
(PMID:23288509) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:23288509
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
G
Axin2
axin 2
involved_in
ISO IEA
(PMID:17072303) GO_REF:0000107
RGD Ensembl
PMID:17072303
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
G
Bambi
BMP and activin membrane-bound inhibitor
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr17:54,121,251...54,125,816
Ensembl chr17:54,121,255...54,126,060
G
Bcl9l
BCL9 like
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr 8:44,811,977...44,840,611
Ensembl chr 8:44,811,977...44,840,611
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3583785 (PMID:16314491) (PMID:20890042)
Ensembl RGD
PMID:16314491 PMID:20890042
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P21275 (PMID:23863481)
RGD
PMID:23863481
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Col1a1
collagen type I alpha 1 chain
involved_in
ISO
(PMID:20018240)
RGD
PMID:20018240
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
G
Crb2
crumbs cell polarity complex component 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:22072575), (PMID:27870829)
CAFA RGD
PMID:22072575 PMID:27870829
GO_REF:0000024
NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within involved_in
ISO IEA
UniProtKB:Q9NX18 (PMID:23983127) (PMID:17072303) GO_REF:0000107
RGD Ensembl
PMID:17072303 PMID:23983127
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dab2
DAB adaptor protein 2
involved_in
IEA ISO IBA
GO_REF:0000107 (PMID:15734730) GO_REF:0000033
Ensembl RGD GO_Central
PMID:15734730
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
involved_in
ISO
(PMID:20154697)
RGD
PMID:20154697
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Fermt2
FERM domain containing kindlin 2
involved_in
ISO
(PMID:24226523)
RGD
PMID:24226523
NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
G
Foxc1
forkhead box C1
involved_in
ISO
(PMID:22991501)
RGD
PMID:22991501
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Gcnt2
glucosaminyl (N-acetyl) transferase 2
involved_in
ISO
(PMID:21750175)
RGD
PMID:21750175
NCBI chr17:23,796,859...23,901,625
Ensembl chr17:23,796,859...23,901,611
G
Glipr2
GLI pathogenesis-related 2
involved_in
ISO
(PMID:23516513)
RGD
PMID:23516513
NCBI chr 5:58,170,417...58,202,258
Ensembl chr 5:58,170,425...58,202,272
G
Hdac2
histone deacetylase 2
IMP
RGD
PMID:19553350
RGD:9590229
NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
G
Il1b
interleukin 1 beta
involved_in
ISO
(PMID:25204733)
RGD
PMID:25204733
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415
G
Il6
interleukin 6
involved_in
ISO
(PMID:25916550)
RGD
PMID:25916550
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Isl1
ISL LIM homeobox 1
involved_in
IMP
PMID:23270756
BHF-UCL RGD
PMID:23270756 PMID:23270756
RGD:13210526 , RGD:13210526
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Kdm1a
lysine demethylase 1A
involved_in
ISO
(PMID:27292636)
RGD
PMID:27292636
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISO IEA
(PMID:20018240) GO_REF:0000107
RGD Ensembl
PMID:20018240
GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Loxl2
lysyl oxidase-like 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:24239292)
UniProt Ensembl RGD
PMID:24239292
GO_REF:0000024 GO_REF:0000107
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
G
Lrg1
leucine-rich alpha-2-glycoprotein 1
involved_in
ISO
(PMID:32887674)
RGD
PMID:32887674
NCBI chr 9:947,516...949,773
Ensembl chr 9:947,516...949,813
G
Mad2l2
mitotic arrest deficient 2 like 2
IMP
TGFb1
RGD
PMID:27488450
RGD:152995505
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
G
Mdk
midkine
involved_in
ISO IEA ISS
(PMID:18469519) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18469519
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mir21
microRNA 21
involved_in
ISO
(PMID:24887517)
RGD
PMID:24887517
NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
G
Mir221
microRNA 221
involved_in
ISO
RNAcentral:URS00002C6949_9606 (PMID:21673316)
RGD
PMID:21673316
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir222
microRNA 222
involved_in
ISO
RNAcentral:URS0000170CF4_9606 (PMID:21673316)
RGD
PMID:21673316
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Mtor
mechanistic target of rapamycin kinase
involved_in
ISO IEA
(PMID:27919618) GO_REF:0000107
RGD Ensembl
PMID:27919618
GO_REF:0000107
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Myocd
myocardin
involved_in
IMP
PMID:23270756
BHF-UCL
PMID:23270756
RGD:13210526
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:20890042)
RGD
PMID:20890042
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
G
Pdpn
podoplanin
involved_in
ISS ISO
GO_REF:0000024 (PMID:17046996), (PMID:21376833)
UniProt RGD
PMID:17046996 PMID:21376833
GO_REF:0000024
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Ptk2
protein tyrosine kinase 2
involved_in
ISO
RNAcentral:URS000060A1F4_9606 (PMID:26944318)
RGD
PMID:26944318
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Rgcc
regulator of cell cycle
involved_in
ISO
(PMID:19158077), (PMID:21307346)
RGD
PMID:19158077 PMID:21307346
NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
G
Sdcbp
syndecan binding protein
involved_in
ISO ISS
(PMID:25893292) GO_REF:0000024
RGD UniProt
PMID:25893292
GO_REF:0000024
NCBI chr 5:19,473,499...19,517,188
Ensembl chr 5:19,489,961...19,527,572
G
Serpinb3
serpin family B member 3
involved_in
ISO
(PMID:20527027)
RGD
PMID:20527027
NCBI chr13:23,274,120...23,280,660
Ensembl chr13:23,274,484...23,313,682
G
Smad2
SMAD family member 2
involved_in
ISO
(PMID:14691138)
RGD
PMID:14691138
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
G
Smad3
SMAD family member 3
involved_in
ISO
(PMID:18505915), (PMID:21307346)
RGD
PMID:18505915 PMID:21307346
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:14691138)
Ensembl RGD
PMID:14691138
GO_REF:0000107
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO
(PMID:20018240), (PMID:23288509) (PMID:20890042), (PMID:24239292)
RGD
PMID:20018240 PMID:20890042 PMID:23288509 PMID:24239292
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Tbx20
T-box transcription factor 20
involved_in
ISO
(PMID:21983003)
RGD
PMID:21983003
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Tcf7l2
transcription factor 7 like 2
involved_in
ISO
(PMID:17072303)
RGD
PMID:17072303
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
G
Tgfb1
transforming growth factor, beta 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:18794329) (PMID:17999987), (PMID:18505915), (PMID:21490602), (PMID:26572508)
UniProt RGD
PMID:17999987 PMID:18505915 PMID:18794329 PMID:21490602 PMID:26572508
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb1i1
transforming growth factor beta 1 induced transcript 1
involved_in
ISO IEA
(PMID:18762808) GO_REF:0000107
RGD Ensembl
PMID:18762808
GO_REF:0000107
NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:17999987), (PMID:18505915)
AgBase RGD
PMID:17999987 PMID:18505915
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:14691138) (PMID:18505915), (PMID:18718461)
AgBase RGD
PMID:14691138 PMID:18505915 PMID:18718461
GO_REF:0000024
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
UniProtKB:P10600 (PMID:18718461)
RGD
PMID:18718461
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(PMID:26459119)
RGD
PMID:26459119
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:18297062) (PMID:17332324), (PMID:18297062), (PMID:20804746)
RGD
PMID:17332324 PMID:18297062 PMID:20804746
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Wwtr1
WW domain containing transcription regulator 1
involved_in
ISO
(PMID:18227151)
RGD
PMID:18227151
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
G
Zfp703
zinc finger protein 703
involved_in
ISO
(PMID:21317240)
RGD
PMID:21317240
NCBI chr16:65,076,507...65,080,677
Ensembl chr16:65,076,507...65,080,677
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(PMID:19161227)
RGD
PMID:19161227
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:17050629)
Ensembl RGD
PMID:17050629
GO_REF:0000107
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Eng
endoglin
NOT|involved_in
ISO
(PMID:17628518)
RGD
PMID:17628518
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Aplf
aprataxin and PNKP like factor
involved_in
ISO
(PMID:33277378)
RGD
PMID:33277378
NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633
G
Clasp1
cytoplasmic linker associated protein 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
G
Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
G
Ctnnb1
catenin beta 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:29910125)
UniProt RGD
PMID:29910125
GO_REF:0000024
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dag1
dystroglycan 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Ell3
elongation factor for RNA polymerase II 3
involved_in
ISS IEA
GO_REF:0000024 GO_REF:0000107
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
G
Epha3
Eph receptor A3
involved_in
ISS ISO
GO_REF:0000024 (PMID:17046737)
UniProt RGD
PMID:17046737
GO_REF:0000024
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:16816361)
RGD
PMID:16816361
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
G
Mcrip1
MAPK regulated co-repressor interacting protein 1
involved_in
ISO ISS
(PMID:25728771) GO_REF:0000024
RGD UniProt
PMID:25728771
GO_REF:0000024
NCBI chr10:105,820,656...105,828,146
Ensembl chr10:105,820,656...105,828,271
G
Phldb1
pleckstrin homology-like domain, family B, member 1
involved_in
ISO IEA
(PMID:23940118) GO_REF:0000107
RGD Ensembl
PMID:23940118
GO_REF:0000107
NCBI chr 8:45,003,543...45,051,541
Ensembl chr 8:45,003,538...45,051,522
G
Phldb2
pleckstrin homology-like domain, family B, member 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
G
Pofut2
protein O-fucosyltransferase 2
acts_upstream_of_or_within
ISO
MGI:3604508|MGI:4127173 (PMID:20637190)
RGD
PMID:20637190
NCBI chr20:11,367,073...11,377,788
Ensembl chr20:11,367,096...11,377,743
G
Qki
QKI, KH domain containing RNA binding
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25768908) GO_REF:0000107
UniProt RGD Ensembl
PMID:25768908
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
G
Smad7
SMAD family member 7
involved_in
ISO IEA
(PMID:24887517) GO_REF:0000107
RGD Ensembl
PMID:24887517
GO_REF:0000107
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tiam1
TIAM Rac1 associated GEF 1
involved_in
ISO
(PMID:20826792)
RGD
PMID:20826792
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
G
Tgfb1
transforming growth factor, beta 1
NOT|involved_in
ISO
(PMID:19161227)
RGD
PMID:19161227
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb3
transforming growth factor, beta 3
NOT|involved_in
ISO
(PMID:19161227)
RGD
PMID:19161227
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(PMID:15073157)
RGD
PMID:15073157
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(PMID:15073157)
RGD
PMID:15073157
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
MGI:1934917 (PMID:16316641)
RGD
PMID:16316641
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Nrp2
neuropilin 2
acts_upstream_of_or_within
ISO
MGI:2137037 (PMID:16319111)
RGD
PMID:16319111
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Sema3f
semaphorin 3F
acts_upstream_of_or_within
ISO
MGI:2670663 (PMID:16319111)
RGD
PMID:16319111
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:15337776)
Ensembl RGD
PMID:15337776
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:19386662)
RGD
PMID:19386662
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19386662)
Ensembl RGD
PMID:19386662
GO_REF:0000107
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Sema3a
semaphorin 3A
involved_in
ISO
(PMID:19386662)
RGD
PMID:19386662
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
involved_in
ISO
(PMID:19386662)
RGD
PMID:19386662
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
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