Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:response to axon injury
go back to main search page
Accession:GO:0048678 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus.


show annotations for term's descendants           Sort by:
response to axon injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:19331524 RGD:2313010 NCBI chr20:3,651,435...3,657,341
Ensembl chr20:3,646,777...3,652,668 		JBrowse link
G Apod apolipoprotein D involved_in IEP PMID:2120218 UniProt PMID:2120218 RGD:2311210 NCBI chr11:82,936,216...82,957,264
Ensembl chr11:69,431,260...69,452,305 		JBrowse link
G Arf4 ARF GTPase 4 IEP RGD PMID:11295238 RGD:2316175 NCBI chr16:1,903,238...1,920,012
Ensembl chr16:1,896,546...1,913,261 		JBrowse link
G Arg1 arginase 1 IEP unilateral vestibular deafferentation RGD PMID:15735325 RGD:4143237 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Arg2 arginase 2 IEP unilateral vestibular deafferentation RGD PMID:15735325 RGD:4143237 NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:97,936,002...97,961,378 		JBrowse link
G Axl Axl receptor tyrosine kinase IEP RGD PMID:20187850 RGD:151665810 NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO
IEA		 MGI:1857429 (PMID:16103918)
GO_REF:0000107		 RGD
Ensembl		 PMID:16103918 GO_REF:0000107 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bnip3 BCL2 interacting protein 3 IEP RGD PMID:22639046 RGD:14398458 NCBI chr 1:203,137,778...203,154,962
Ensembl chr 1:193,708,167...193,725,359 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEP RGD PMID:17200138 RGD:2316482 NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408 		JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IEP RGD PMID:16495484 RGD:1600854 NCBI chr20:28,657,308...28,694,976
Ensembl chr20:28,114,404...28,121,807 		JBrowse link
G Clu clusterin IEP RGD PMID:10800205 RGD:408418725 NCBI chr15:44,336,619...44,375,861
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
G Csf1r colony stimulating factor 1 receptor IEP RGD PMID:20187850 RGD:151665810 NCBI chr18:56,834,152...56,860,804
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G Cst3 cystatin C IEP Optic nerve axotomy
Entorhinal deafferentation
Facial nerve axotomy
Hypophysectomy		 RGD PMID:14745560 PMID:12044447 PMID:8738161 PMID:9147287 RGD:2306507, RGD:2306510, RGD:2306509, RGD:2306508 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:136,336,920...136,340,822 		JBrowse link
G Cyss cystatin S IEP Sympathectomy, parasympathectomy
Glossopharyngeal denervation		 RGD PMID:12005263 PMID:7878088 RGD:2306751, RGD:2306752 NCBI chr 3:157,892,660...157,897,265
Ensembl chr 3:137,432,049...137,436,610 		JBrowse link
G Dpysl3 dihydropyrimidinase-like 3 involved_in IEP PMID:20800647 UniProt PMID:20800647 RGD:8554592 NCBI chr18:35,625,357...35,731,152
Ensembl chr18:35,377,181...35,480,157 		JBrowse link
G Drd2 dopamine receptor D2 IEP RGD PMID:19500946 RGD:2311554 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Epo erythropoietin IEP RGD PMID:15470751 RGD:1601067 NCBI chr12:24,841,285...24,844,725
Ensembl chr12:19,204,508...19,207,946 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IDA RGD PMID:15800203 RGD:1582139 NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO
IEA		 MGI:1857458 (PMID:16009496)
GO_REF:0000107		 RGD
Ensembl		 PMID:16009496 GO_REF:0000107 NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:16009496) RGD PMID:16009496 NCBI chr14:81,211,800...81,227,215
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in IMP PMID:15485775 UniProt PMID:15485775 RGD:1579783 NCBI chr 3:148,448,115...148,461,458
Ensembl chr 3:127,994,226...128,007,841 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO
IEA		 (PMID:20424322)
GO_REF:0000107		 RGD
Ensembl		 PMID:20424322 GO_REF:0000107 NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Gip gastric inhibitory polypeptide IEP RGD PMID:19170165 RGD:2312528 NCBI chr10:81,465,070...81,473,216
Ensembl chr10:80,968,352...80,976,503 		JBrowse link
G Gipr gastric inhibitory polypeptide receptor IEP RGD PMID:19170165 RGD:2312528 NCBI chr 1:87,932,316...87,956,084
Ensembl chr 1:78,805,593...78,814,462 		JBrowse link
G Gstm1 glutathione S-transferase mu 1 IEP RGD PMID:20298122 RGD:7771530 NCBI chr 2:198,338,005...198,346,007
Ensembl chr 2:195,649,845...195,655,411 		JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 IEP RGD PMID:24355600 RGD:126908004 NCBI chr 3:176,239,285...176,332,408
Ensembl chr 3:155,822,963...155,916,194 		JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IEP RGD PMID:10790857 RGD:9831168 NCBI chr13:103,297,387...103,494,686
Ensembl chr13:100,766,113...100,963,435 		JBrowse link
G Kdr kinase insert domain receptor IEP RGD PMID:20187850 RGD:151665810 NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,217,871...32,261,018 		JBrowse link
G Lgals1 galectin 1 IEP RGD PMID:18850073 RGD:2316527 NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:110,481,392...110,488,345 		JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:19908283 RGD:2316612 NCBI chr10:35,060,002...35,066,466
Ensembl chr10:34,560,360...34,562,651 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IEP RGD PMID:17918263 RGD:2303707 NCBI chr 5:21,437,127...21,553,097
Ensembl chr 5:16,639,466...16,756,868 		JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:17880387 RGD:2304007 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:30,817,261...30,910,317 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IMP protection from axon degeneration following transection or NGF deprivation RGD PMID:15737734 RGD:2293210 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Matn2 matrilin 2 acts_upstream_of_or_within ISO
IEA		 MGI:3050541 (PMID:19295126)
GO_REF:0000107		 RGD
Ensembl		 PMID:19295126 GO_REF:0000107 NCBI chr 7:67,380,140...67,529,767
Ensembl chr 7:65,494,834...65,645,113 		JBrowse link
G Matn4 matrilin 4 acts_upstream_of_or_within ISO (PMID:19295126) RGD PMID:19295126 NCBI chr 3:173,539,966...173,554,984
Ensembl chr 3:153,120,632...153,135,865 		JBrowse link
G Max MYC associated factor X IEP RGD PMID:14603520 RGD:2316820 NCBI chr 6:101,369,989...101,395,333
Ensembl chr 6:95,636,858...95,662,137 		JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:23220115 RGD:12738219 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Morn4 MORN repeat containing 4 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:22496551)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:22496551 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in IDA PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr17:62,911,705...62,996,544
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Musk muscle associated receptor tyrosine kinase IEP RGD PMID:9698449 RGD:2317114 NCBI chr 5:77,853,560...77,967,653
Ensembl chr 5:73,058,121...73,171,932 		JBrowse link
G Naip6 NLR family, apoptosis inhibitory protein 6 IEP RGD PMID:12617963 RGD:1299309 NCBI chr 2:33,241,520...33,293,184
Ensembl chr 2:31,507,424...31,570,542 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO
IEA		 (PMID:29079753)
GO_REF:0000107		 RGD
Ensembl		 PMID:29079753 GO_REF:0000107 NCBI chr  X:8,379,569...8,404,019
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:15735325 RGD:4143237 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
G Nppc natriuretic peptide C involved_in ISO
IEA		 MGI:2388899 (PMID:29501420)
GO_REF:0000107		 RGD
Ensembl		 PMID:29501420 GO_REF:0000107 NCBI chr 9:94,767,986...94,772,186
Ensembl chr 9:87,320,051...87,324,251 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IEP RGD PMID:21456016 RGD:5684341 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:17532148 RGD:2325627 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:132,132,849...132,503,286 		JBrowse link
G Nts neurotensin IEP RGD PMID:8866516 RGD:9743915 NCBI chr 7:39,451,484...39,460,888
Ensembl chr 7:37,564,533...37,574,423 		JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in IMP PMID:12917686 ARUK-UCL PMID:12917686 RGD:13673840 NCBI chr12:39,505,438...39,523,349
Ensembl chr12:33,844,396...33,862,253 		JBrowse link
G P2ry12 purinergic receptor P2Y12 involved_in IDA PMID:14603465 ARUK-UCL PMID:14603465 RGD:13673748 NCBI chr 2:145,631,487...145,673,194
Ensembl chr 2:143,481,430...143,523,361 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP RGD PMID:18585435 RGD:2308892 NCBI chr 2:6,130,045...6,176,974
Ensembl chr 2:4,395,543...4,442,434 		JBrowse link
G Pdgfb platelet derived growth factor subunit B IEP RGD PMID:7922556 RGD:10449483 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (PMID:32514138) RGD PMID:32514138 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Pros1 protein S IEP RGD PMID:20187850 RGD:151665810 NCBI chr11:13,676,310...13,757,858
Ensembl chr11:230,696...311,286 		JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 IEP RGD PMID:11157073 RGD:1302222 NCBI chr 4:159,212,320...159,237,069
Ensembl chr 4:157,526,035...157,550,984 		JBrowse link
G Rangap1 RAN GTPase activating protein 1 IEP RGD PMID:18667152 RGD:9835000 NCBI chr 7:115,104,820...115,130,564
Ensembl chr 7:113,224,703...113,250,438 		JBrowse link
G Reln reelin IEP RGD PMID:18625290 RGD:2317775 NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in IEA
ISO		 GO_REF:0000002
GO_REF:0000107
(PMID:25908823), (PMID:28334607)		 InterPro
Ensembl
RGD		 PMID:25908823 PMID:28334607 GO_REF:0000002 GO_REF:0000107 NCBI chr10:63,867,503...63,890,872
Ensembl chr10:63,369,456...63,392,822 		JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15356205 RGD:1580344 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2655190 (PMID:16858406), (PMID:22575539)
GO_REF:0000107
(PMID:23827345), (PMID:27040821)		 RGD
Ensembl		 PMID:16858406 PMID:22575539 PMID:23827345 PMID:27040821 GO_REF:0000107 NCBI chr 1:235,963,455...236,043,572
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:1857872 (PMID:8673102)		 UniProt
Ensembl
RGD		 PMID:8673102 GO_REF:0000024 GO_REF:0000107 NCBI chr11:42,942,742...42,948,399
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO
IEA		 MGI:2447406|MGI:2679331 (PMID:16677818)
GO_REF:0000107		 RGD
Ensembl		 PMID:16677818 GO_REF:0000107 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:47,636,528...47,645,189 		JBrowse link
G Thy1 Thy-1 cell surface antigen IEP RGD PMID:20187850 RGD:151665810 NCBI chr 8:53,286,396...53,291,541
Ensembl chr 8:44,389,513...44,394,659 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO
IEA		 (PMID:31235932), (PMID:32514138)
GO_REF:0000107
(PMID:31235932), (PMID:31902528)		 RGD
Ensembl		 PMID:31235932 PMID:31902528 PMID:32514138 GO_REF:0000107 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Tspo translocator protein IEP RGD PMID:15255978 RGD:2317154 NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:114,720,188...114,730,450 		JBrowse link
G Txn1 thioredoxin 1 IEP RGD PMID:19833109 RGD:5133729 NCBI chr 5:77,507,455...77,519,685
Ensembl chr 5:72,711,933...72,724,629 		JBrowse link
G Txn2 thioredoxin 2 IEP RGD PMID:18441302 RGD:2306158 NCBI chr 7:111,377,338...111,390,940
Ensembl chr 7:109,496,761...109,510,359 		JBrowse link
G Txnrd1 thioredoxin reductase 1 IEP RGD PMID:19833109 RGD:5133729 NCBI chr 7:22,717,620...22,802,553
Ensembl chr 7:20,830,045...20,907,863 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp involved_in ISO (PMID:25690660) RGD PMID:25690660 NCBI chr 1:94,800,372...94,804,307
Ensembl chr 1:85,672,994...85,676,848 		JBrowse link
G Uck2 uridine-cytidine kinase 2 IEP RGD PMID:10581173 RGD:634248 NCBI chr13:81,913,732...81,971,036
Ensembl chr13:79,383,846...79,438,352 		JBrowse link
axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO
IEA		 MGI:1856026 (PMID:9396756)
GO_REF:0000107		 RGD
Ensembl		 PMID:9396756 GO_REF:0000107 NCBI chr 8:118,056,899...118,069,090
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of ISO
IEA		 MGI:97380 (PMID:16142215)
GO_REF:0000107		 RGD
Ensembl		 PMID:16142215 GO_REF:0000107 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:132,132,849...132,503,286 		JBrowse link
G Tnr tenascin R acts_upstream_of ISO
IEA		 MGI:2154583 (PMID:16870730)
GO_REF:0000107		 RGD
Ensembl		 PMID:16870730 GO_REF:0000107 NCBI chr13:74,285,141...74,706,174
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 NOT|acts_upstream_of_or_within ISO MGI:88057 (PMID:7798939) RGD PMID:7798939 NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoe apolipoprotein E NOT|acts_upstream_of_or_within ISO MGI:88049 (PMID:7798939) RGD PMID:7798939 NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO (PMID:9009190) RGD PMID:9009190 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bex1 brain expressed X-linked 1 acts_upstream_of_or_within ISO (PMID:20731761) RGD PMID:20731761 NCBI chr  X:104,010,639...104,012,143
Ensembl chr  X:99,219,014...99,220,958 		JBrowse link
G Chl1 cell adhesion molecule L1-like IEP
NAS		 RGD PMID:14707551 PMID:14707551 RGD:1303346, RGD:1303346 NCBI chr 4:137,847,648...138,062,077
Ensembl chr 4:136,291,463...136,503,265 		JBrowse link
G Cntf ciliary neurotrophic factor involved_in IDA PMID:16699509 UniProt PMID:16699509 RGD:12793002 NCBI chr 1:219,312,512...219,314,535
Ensembl chr 1:209,887,854...209,889,877 		JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 IEP RGD PMID:11069908 RGD:1298825 NCBI chr 8:119,098,932...119,113,191
Ensembl chr 8:110,220,653...110,234,758 		JBrowse link
G Ctnna1 catenin alpha 1 IEP RGD PMID:12387456 RGD:632464 NCBI chr18:27,002,330...27,135,009
Ensembl chr18:26,728,485...26,860,910 		JBrowse link
G Dag1 dystroglycan 1 IEP RGD PMID:16228655 RGD:11537480 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Dhfr dihydrofolate reductase involved_in IMP PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr 2:25,320,895...25,346,004
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (PMID:21935678) RGD PMID:21935678 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IMP RGD PMID:23437108 RGD:405650403 NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO
IEA		 (PMID:20424322)
GO_REF:0000107		 RGD
Ensembl		 PMID:20424322 GO_REF:0000107 NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Gap43 growth associated protein 43 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:71,882,131...71,975,799
Ensembl chr11:58,376,371...58,470,045 		JBrowse link
G Isl1 ISL LIM homeobox 1 IEP RGD PMID:10363827 RGD:2311122 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Jak2 Janus kinase 2 IMP RGD PMID:15716400 RGD:1641846 NCBI chr 1:236,408,905...236,468,769
Ensembl chr 1:226,995,334...227,054,189 		JBrowse link
G Jam3 junctional adhesion molecule 3 IEP RGD PMID:22950044 RGD:7488944 NCBI chr 8:33,767,606...33,828,451
Ensembl chr 8:25,507,057...25,569,355 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO
IEA		 MGI:2445420 (PMID:15233917)
GO_REF:0000107		 RGD
Ensembl		 PMID:15233917 GO_REF:0000107 NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Mag myelin-associated glycoprotein acts_upstream_of_or_within ISO
IEA		 MGI:1328321 (PMID:20731761)
GO_REF:0000107		 RGD
Ensembl		 PMID:20731761 GO_REF:0000107 NCBI chr 1:95,275,728...95,291,133
Ensembl chr 1:86,148,228...86,163,656 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in IMP PMID:25944905 UniProt PMID:25944905 RGD:13673780 NCBI chr10:14,422,936...14,463,387
Ensembl chr10:13,918,400...13,958,273 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in IMP PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr17:62,911,705...62,996,544
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Nefh neurofilament heavy chain IDA RGD PMID:10646539 RGD:9698439 NCBI chr14:84,044,428...84,054,413
Ensembl chr14:79,830,362...79,840,351 		JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:15206821 RGD:9698447 NCBI chr15:46,535,857...46,541,161
Ensembl chr15:42,360,454...42,365,755 		JBrowse link
G Nrep neuronal regeneration related protein involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15485502 GO_REF:0000033, RGD:1540387 NCBI chr18:25,291,219...25,320,742
Ensembl chr18:25,017,083...25,046,591 		JBrowse link
G Rxra retinoid X receptor alpha IEP RGD PMID:16782282 RGD:1643108 NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Vcan versican IEP RGD PMID:12526031 RGD:632591 NCBI chr 2:22,497,035...22,595,955
Ensembl chr 2:20,761,718...20,860,637 		JBrowse link
negative regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kiaa0319 KIAA0319 homolog acts_upstream_of_or_within ISO
IEA		 (PMID:28334068)
GO_REF:0000107
MGI:4362922 (PMID:28334068)		 RGD
Ensembl		 PMID:28334068 GO_REF:0000107 NCBI chr17:40,587,001...40,654,525
Ensembl chr17:40,165,084...40,225,653 		JBrowse link
G Tnr tenascin R acts_upstream_of_or_within ISO
IEA		 MGI:2154583 (PMID:16870730)
GO_REF:0000107		 RGD
Ensembl		 PMID:16870730 GO_REF:0000107 NCBI chr13:74,285,141...74,706,174
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
negative regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers2 ceramide synthase 2 involved_in IMP PMID:22393241 BHF-UCL PMID:22393241 RGD:11041067 NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:182,890,493...182,933,314 		JBrowse link
G Epha4 Eph receptor A4 involved_in
NOT		 IMP
ISO
ISS		 (PMID:15537875)
GO_REF:0000024		 RGD
UniProt		 PMID:15537875 PMID:17970742 PMID:17418490 GO_REF:0000024, RGD:5688750, RGD:5688782 NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
G Fignl2 fidgetin-like 2 involved_in IMP
IEA		 PMID:33872220
GO_REF:0000107		 Ensembl PMID:33872220 GO_REF:0000107, RGD:401901234 NCBI chr 7:134,038,734...134,066,626
Ensembl chr 7:132,162,390...132,164,336 		JBrowse link
G Inpp5f inositol polyphosphate-5-phosphatase F involved_in ISO
IEA		 (PMID:26203138)
GO_REF:0000107		 RGD
Ensembl		 PMID:26203138 GO_REF:0000107 NCBI chr 1:192,620,891...192,700,681
Ensembl chr 1:183,190,480...183,270,276 		JBrowse link
G Kremen1 kringle containing transmembrane protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24167472)		 Ensembl
RGD		 PMID:24167472 GO_REF:0000107 NCBI chr14:84,295,931...84,361,534
Ensembl chr14:80,084,403...80,147,516 		JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 acts_upstream_of_or_within ISO
IEA		 (PMID:26651291)
GO_REF:0000107		 RGD
Ensembl		 PMID:26651291 GO_REF:0000107 NCBI chr 2:194,635,686...194,705,014
Ensembl chr 2:191,949,819...192,012,579 		JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO
IEA		 (PMID:26651291)
GO_REF:0000107		 RGD
Ensembl		 PMID:26651291 GO_REF:0000107 NCBI chr 8:68,169,711...68,322,158
Ensembl chr 8:59,275,569...59,430,348 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:26203138) RGD PMID:26203138 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in ISS
ISO		 GO_REF:0000024
(PMID:19780196), (PMID:22406547)		 UniProt
RGD		 PMID:19780196 PMID:22406547 GO_REF:0000024 NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a IMP RGD PMID:16585268 RGD:9850138 NCBI chr 1:136,538,782...136,582,763
Ensembl chr 1:127,128,934...127,172,918 		JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISS
ISO		 GO_REF:0000024
(PMID:22406547)		 UniProt
RGD		 PMID:22406547 GO_REF:0000024 NCBI chr11:96,348,613...96,373,554
Ensembl chr11:82,844,309...82,869,466 		JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:22406547)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:22406547 GO_REF:0000024 GO_REF:0000107 NCBI chr10:60,541,584...60,615,302
Ensembl chr10:60,043,002...60,116,978 		JBrowse link
G Xylt1 xylosyltransferase 1 IMP RGD PMID:18765417 RGD:2313145 NCBI chr 1:181,078,222...181,361,047
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 IEP RGD PMID:15625076 RGD:1581125 NCBI chr14:5,613,569...5,620,695
Ensembl chr14:5,308,885...5,315,162 		JBrowse link
negative regulation of optical nerve axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtca RNA 3'-terminal phosphate cyclase involved_in ISO
IEA		 (PMID:31919191)
GO_REF:0000107		 RGD
Ensembl		 PMID:31919191 GO_REF:0000107 NCBI chr 2:207,140,090...207,161,366
Ensembl chr 2:204,455,175...204,476,460 		JBrowse link
negative regulation of Schwann cell proliferation involved in axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers2 ceramide synthase 2 involved_in IMP PMID:22393241 BHF-UCL PMID:22393241 RGD:11041067 NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:182,890,493...182,933,314 		JBrowse link
peripheral nervous system axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 IEP RGD PMID:2120218 RGD:2311210 NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa4 apolipoprotein A4 IEP RGD PMID:2120218 RGD:2311210 NCBI chr 8:55,435,779...55,438,160
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Apod apolipoprotein D IEP RGD PMID:2120218 RGD:2311210 NCBI chr11:82,936,216...82,957,264
Ensembl chr11:69,431,260...69,452,305 		JBrowse link
G Apoe apolipoprotein E IEP RGD PMID:2120218 RGD:2311210 NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Calu calumenin IEP sciatic nerve RGD PMID:15509515 RGD:2316214 NCBI chr 4:58,914,456...58,941,957
Ensembl chr 4:57,948,997...57,976,593 		JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IEP RGD PMID:16495484 RGD:1600854 NCBI chr20:28,657,308...28,694,976
Ensembl chr20:28,114,404...28,121,807 		JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:10924960 RGD:2304028 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:30,817,261...30,910,317 		JBrowse link
G Mmp2 matrix metallopeptidase 2 IDA RGD PMID:15026117 RGD:1582605 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:15679872 RGD:2326091 NCBI chr 8:58,762,088...59,062,131
Ensembl chr 8:49,865,633...50,166,014 		JBrowse link
G Nefl neurofilament light chain acts_upstream_of_or_within ISO
IEA		 MGI:2180095 (PMID:9398473)
GO_REF:0000107		 RGD
Ensembl		 PMID:9398473 GO_REF:0000107 NCBI chr15:46,477,330...46,481,203
Ensembl chr15:42,301,916...42,305,793 		JBrowse link
G Tnc tenascin C acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2388370 (PMID:16262655)
GO_REF:0000107		 RGD
Ensembl		 PMID:16262655 GO_REF:0000107 NCBI chr 5:82,391,340...82,476,197
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
G Tspo translocator protein IEP RGD PMID:8977149 RGD:2317177 NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:114,720,188...114,730,450 		JBrowse link
positive regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO
IEA		 MGI:97380 (PMID:16142215)
GO_REF:0000107		 RGD
Ensembl		 PMID:16142215 GO_REF:0000107 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:132,132,849...132,503,286 		JBrowse link
positive regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:24873730 RGD:405878058 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:24733831) RGD PMID:24733831 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Cntf ciliary neurotrophic factor involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15574731 GO_REF:0000033, RGD:1626128 NCBI chr 1:219,312,512...219,314,535
Ensembl chr 1:209,887,854...209,889,877 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B IDA RGD PMID:9512405 RGD:7205517 NCBI chr 6:33,551,583...33,570,055
Ensembl chr 6:27,838,802...27,848,653 		JBrowse link
G Flna filamin A involved_in ISO (PMID:26157139) RGD PMID:26157139 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:152,007,758...152,031,052 		JBrowse link
G Grn granulin precursor involved_in ISS
ISO		 GO_REF:0000024
(PMID:28453791)		 UniProt
RGD		 PMID:28453791 GO_REF:0000024 NCBI chr10:87,887,834...87,893,938
Ensembl chr10:87,387,638...87,393,775 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor IMP RGD PMID:23349896 RGD:10046026 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Mif macrophage migration inhibitory factor IMP RGD PMID:12456989 RGD:1642004 NCBI chr20:12,767,138...12,791,222
Ensembl chr20:12,790,902...12,799,504
Ensembl chr 4:12,790,902...12,799,504 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 IMP RGD PMID:18431495 RGD:2306515 NCBI chr10:54,001,435...54,080,909
Ensembl chr10:53,516,491...53,570,907 		JBrowse link
G Nrg1 neuregulin 1 IDA RGD PMID:20957456 RGD:10449012 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Ptn pleiotrophin involved_in IDA PMID:27671118 UniProt PMID:27671118 RGD:14397577 NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Scarf1 scavenger receptor class F, member 1 involved_in ISO
IEA		 (PMID:18160648)
GO_REF:0000107		 RGD
Ensembl		 PMID:18160648 GO_REF:0000107 NCBI chr10:60,857,494...60,869,795
Ensembl chr10:60,359,197...60,371,516 		JBrowse link
G Stk24 serine/threonine kinase 24 IMP RGD PMID:19855390 RGD:2317003 NCBI chr15:104,770,556...104,866,524
Ensembl chr15:98,365,791...98,460,553 		JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
positive regulation of sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pum2 pumilio RNA-binding family member 2 IMP RGD PMID:31606248 RGD:242905203 NCBI chr 6:37,182,130...37,262,223
Ensembl chr 6:31,462,872...31,542,976 		JBrowse link
regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 acts_upstream_of_or_within ISO
IEA		 MGI:2443718 (PMID:26651291)
GO_REF:0000107		 RGD
Ensembl		 PMID:26651291 GO_REF:0000107 NCBI chr 6:46,601,583...46,663,690
Ensembl chr 6:40,872,856...40,920,639 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:1346866|MGI:1346867 (PMID:24733831) RGD PMID:24733831 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO
IEA		 MGI:103038 (PMID:24129709)
GO_REF:0000107		 RGD
Ensembl		 PMID:24129709 GO_REF:0000107 NCBI chr 5:75,074,107...75,079,182
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G LOC134486345 serine/threonine-protein kinase 24-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:18,234,608...18,236,670 JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 acts_upstream_of_or_within ISO
IEA		 MGI:1096335|MGI:1097159 (PMID:26651291)
GO_REF:0000107		 RGD
Ensembl		 PMID:26651291 GO_REF:0000107 NCBI chr 2:194,635,686...194,705,014
Ensembl chr 2:191,949,819...192,012,579 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1346867|MGI:88190 (PMID:24733831)
GO_REF:0000107		 RGD
Ensembl		 PMID:24733831 GO_REF:0000107 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within ISO
IEA		 MGI:1346866|MGI:88190 (PMID:24733831)
GO_REF:0000107		 RGD
Ensembl		 PMID:24733831 GO_REF:0000107 NCBI chr 7:9,241,449...9,264,216
Ensembl chr 7:8,580,905...8,610,243 		JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO
IEA		 MGI:2443718 (PMID:26651291)
GO_REF:0000107		 RGD
Ensembl		 PMID:26651291 GO_REF:0000107 NCBI chr 8:68,169,711...68,322,158
Ensembl chr 8:59,275,569...59,430,348 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO MGI:88190 (PMID:24733831) RGD PMID:24733831 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F acts_upstream_of_or_within ISO (PMID:21976490) RGD PMID:21976490 NCBI chr 5:137,027,376...137,109,405
Ensembl chr 5:131,742,754...131,810,023 		JBrowse link
G Stk24 serine/threonine kinase 24 involved_in ISO
IEA		 (PMID:19855390)
GO_REF:0000107		 RGD
Ensembl		 PMID:19855390 GO_REF:0000107 NCBI chr15:104,770,556...104,866,524
Ensembl chr15:98,365,791...98,460,553 		JBrowse link
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Omg oligodendrocyte-myelin glycoprotein acts_upstream_of_or_within ISO MGI:3821628 (PMID:18692574) RGD PMID:18692574 NCBI chr10:64,959,316...64,962,050
Ensembl chr10:64,461,350...64,464,084 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    response to stimulus 11067
      response to stress 4344
        response to wounding 623
          response to axon injury 136
            axon regeneration + 76
paths to the root