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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of collateral sprouting
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Accession:GO:0048670 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of collateral sprouting.


show annotations for term's descendants           Sort by:
regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO MGI:2443199 (PMID:24573299) RGD PMID:24573299 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Fstl4 follistatin-like 4 acts_upstream_of_or_within ISO
IEA		 MGI:88145 (PMID:24573299)
GO_REF:0000107		 RGD
Ensembl		 PMID:24573299 GO_REF:0000107 NCBI chr10:37,412,288...37,845,405
Ensembl chr10:36,911,420...37,338,588 		JBrowse link
negative regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BCL11 transcription factor A involved_in ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:102,230,147...102,325,289
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Epha7 Eph receptor A7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19036963)		 Ensembl
RGD		 PMID:19036963 GO_REF:0000107 NCBI chr 5:47,771,776...47,925,189
Ensembl chr 5:42,975,405...43,127,112 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22726441)		 UniProt
RGD		 PMID:22726441 GO_REF:0000024 NCBI chr  X:142,312,381...142,838,581
Ensembl chr  X:137,276,511...137,800,391 		JBrowse link
G Fstl4 follistatin-like 4 acts_upstream_of_or_within ISO
IEA		 (PMID:24573299)
GO_REF:0000107		 RGD
Ensembl		 PMID:24573299 GO_REF:0000107 NCBI chr10:37,412,288...37,845,405
Ensembl chr10:36,911,420...37,338,588 		JBrowse link
G Ifrd1 interferon-related developmental regulator 1 acts_upstream_of_or_within ISO
IEA		 MGI:97321 (PMID:18052984)
GO_REF:0000107		 RGD
Ensembl		 PMID:18052984 GO_REF:0000107 NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in ISS
ISO		 GO_REF:0000024
(PMID:22519304)		 UniProt
RGD		 PMID:22519304 GO_REF:0000024 NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a IMP RGD PMID:23744345 RGD:9850124 NCBI chr 1:136,538,782...136,582,763
Ensembl chr 1:127,128,934...127,172,918 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17389358)		 GO_Central
RGD		 PMID:17389358 GO_REF:0000033 NCBI chr12:51,511,492...51,537,746
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:17389358)		 GO_Central
Ensembl
RGD		 PMID:17389358 GO_REF:0000033 GO_REF:0000107 NCBI chr10:46,951,038...47,029,844
Ensembl chr10:46,454,030...46,530,407 		JBrowse link
negative regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spart spartin acts_upstream_of_or_within ISO
IEA		 MGI:1919205|MGI:5430946 (PMID:22619377)
GO_REF:0000107		 RGD
Ensembl		 PMID:22619377 GO_REF:0000107 NCBI chr 2:141,442,770...141,469,388
Ensembl chr 2:139,292,355...139,319,248 		JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 IEP RGD PMID:15625076 RGD:1581125 NCBI chr14:5,613,569...5,620,695
Ensembl chr14:5,308,885...5,315,162 		JBrowse link
positive regulation of collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BCL11 transcription factor A involved_in ISO (PMID:19616629) RGD PMID:19616629 NCBI chr14:102,230,147...102,325,289
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19036963)
GO_REF:0000107
(PMID:24573299)		 RGD
Ensembl		 PMID:19036963 PMID:24573299 GO_REF:0000107 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO (PMID:18052984) RGD PMID:18052984 NCBI chr 2:175,714,862...175,719,208
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Dcx doublecortin IMP RGD PMID:19726658 RGD:12904759 NCBI chr  X:112,227,455...112,370,291
Ensembl chr  X:107,430,767...107,507,476 		JBrowse link
G Efna5 ephrin A5 involved_in ISO (PMID:19036963) RGD PMID:19036963 NCBI chr 9:109,763,786...110,042,396
Ensembl chr 9:102,320,295...102,597,413 		JBrowse link
G Ist1 IST1 factor associated with ESCRT-III acts_upstream_of_or_within ISO
IEA		 MGI:2139806 (PMID:22619377)
GO_REF:0000107		 RGD
Ensembl		 PMID:22619377 GO_REF:0000107 NCBI chr19:54,558,353...54,580,551
Ensembl chr19:37,648,095...37,670,956 		JBrowse link
G Lpar3 lysophosphatidic acid receptor 3 acts_upstream_of_or_within ISO
IEA		 (PMID:22465231)
GO_REF:0000107		 RGD
Ensembl		 PMID:22465231 GO_REF:0000107 NCBI chr 2:237,785,371...237,854,199
Ensembl chr 2:235,149,065...235,193,357 		JBrowse link
G Ngf nerve growth factor acts_upstream_of_or_within ISO (PMID:18052984) RGD PMID:18052984 NCBI chr 2:192,589,580...192,642,971
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Rnd2 Rho family GTPase 2 acts_upstream_of_or_within ISO (PMID:22465231) RGD PMID:22465231 NCBI chr10:86,899,395...86,902,992
Ensembl chr10:86,399,148...86,402,742 		JBrowse link
G Sema4d semaphorin 4D involved_in ISO
IEA		 (PMID:19788569)
GO_REF:0000107		 RGD
Ensembl		 PMID:19788569 GO_REF:0000107 NCBI chr17:13,582,085...13,688,889
Ensembl chr17:13,430,379...13,537,138 		JBrowse link
positive regulation of collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO (PMID:18716223) RGD PMID:18716223 NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO
IEA		 (PMID:18716223)
GO_REF:0000107		 RGD
Ensembl		 PMID:18716223 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IDA RGD PMID:23867460 RGD:13800520 NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Omg oligodendrocyte-myelin glycoprotein acts_upstream_of_or_within ISO MGI:3821628 (PMID:18692574) RGD PMID:18692574 NCBI chr10:64,461,350...64,464,084
Ensembl chr10:64,461,350...64,464,084 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    regulation of biological process 13403
      regulation of growth 686
        regulation of developmental growth 410
          regulation of collateral sprouting 24
            negative regulation of collateral sprouting + 11
            positive regulation of collateral sprouting + 13
            regulation of collateral sprouting in absence of injury + 3
            regulation of collateral sprouting of injured axon + 1
            regulation of collateral sprouting of intact axon in response to injury + 2
Path 2
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            nervous system development 2881
              neurogenesis 2127
                generation of neurons 1820
                  neuron differentiation 1740
                    neuron development 1422
                      neuron projection development 1246
                        axon development 594
                          axonogenesis 515
                            collateral sprouting 36
                              regulation of collateral sprouting 24
                                negative regulation of collateral sprouting + 11
                                positive regulation of collateral sprouting + 13
                                regulation of collateral sprouting in absence of injury + 3
                                regulation of collateral sprouting of injured axon + 1
                                regulation of collateral sprouting of intact axon in response to injury + 2
paths to the root