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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic vesicle membrane organization
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Accession:GO:0048499 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle.
Synonyms:exact_synonym: synaptic vesicle membrane organisation
 narrow_synonym: SLMV biogenesis
 related_synonym: synaptic vesicle membrane organization and biogenesis


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synaptic vesicle membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:1856083 (PMID:15860731)		 GO_Central
Ensembl
RGD		 PMID:15860731 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:9,620,909...9,656,350
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Syngr1 synaptogyrin 1 involved_in IMP PMID:15590695 UniProt PMID:15590695 RGD:13210551 NCBI chr 7:113,516,246...113,542,918
Ensembl chr 7:111,635,918...111,659,341 		JBrowse link
G Syngr2 synaptogyrin 2 involved_in IMP PMID:15590695 UniProt PMID:15590695 RGD:13210551 NCBI chr10:103,029,903...103,034,473
Ensembl chr10:103,029,917...103,034,473 		JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24930953)		 UniProt
Ensembl
RGD		 PMID:24930953 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691 		JBrowse link
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Doc2a double C2 domain alpha involved_in IMP
IEA
IBA
ISO
IDA		 PMID:22036572
GO_REF:0000107
GO_REF:0000033
(PMID:20150444)		 Ensembl
GO_Central
RGD		 PMID:20150444 PMID:22036572 PMID:22036572 GO_REF:0000033 GO_REF:0000107, RGD:155230732, RGD:155230732 NCBI chr 1:190,887,306...190,893,057
Ensembl chr 1:181,458,390...181,462,030 		JBrowse link
G Doc2b double C2 domain beta involved_in IMP
IBA
ISO
IDA
IEA		 PMID:22036572
GO_REF:0000033
(PMID:20150444)
GO_REF:0000107		 GO_Central
RGD
Ensembl		 PMID:20150444 PMID:22036572 PMID:22036572 GO_REF:0000033 GO_REF:0000107, RGD:155230732, RGD:155230732 NCBI chr10:61,126,295...61,151,533
Ensembl chr10:60,628,029...60,653,267 		JBrowse link
G Rph3a rabphilin 3A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,203,004...41,279,536
Ensembl chr12:35,542,728...35,617,592 		JBrowse link
G Rph3al rabphilin 3A-like (without C2 domains) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:61,188,288...61,331,591
Ensembl chr10:60,690,031...60,801,883 		JBrowse link
G Syt1 synaptotagmin 1 involved_in ISO
IEA
IBA		 (PMID:7954835)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:7954835 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:45,699,649...46,244,460
Ensembl chr 7:43,815,785...44,357,803 		JBrowse link
G Syt11 synaptotagmin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:176,503,845...176,530,354
Ensembl chr 2:174,206,191...174,231,964 		JBrowse link
G Syt13 synaptotagmin 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:99,332,554...99,372,960
Ensembl chr 3:78,877,114...78,917,392 		JBrowse link
G Syt2 synaptotagmin 2 involved_in ISO
IBA		 (PMID:17192432)
GO_REF:0000033		 RGD
GO_Central		 PMID:17192432 GO_REF:0000033 NCBI chr13:48,639,634...48,749,814
Ensembl chr13:46,185,282...46,193,859 		JBrowse link
G Syt4 synaptotagmin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:23,311,454...23,320,863
Ensembl chr18:23,038,378...23,046,332 		JBrowse link
G Syt5 synaptotagmin 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,320,034...78,327,750
Ensembl chr 1:69,277,351...69,285,067 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO
IBA		 (PMID:24267651)
GO_REF:0000033		 RGD
GO_Central		 PMID:24267651 GO_REF:0000033 NCBI chr 1:216,456,148...216,518,718
Ensembl chr 1:207,031,592...207,089,026 		JBrowse link
G Syt8 synaptotagmin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:207,017,602...207,023,076
Ensembl chr 1:197,590,149...197,593,504 		JBrowse link
G Syt9 synaptotagmin 9 involved_in ISO (PMID:17521570) RGD PMID:17521570 NCBI chr 1:170,687,666...170,868,146
Ensembl chr 1:161,275,734...161,455,007 		JBrowse link
positive regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rims1 regulating synaptic membrane exocytosis 1 involved_in NAS PMID:9252191 UniProt PMID:9252191 RGD:633897 NCBI chr 9:32,193,352...32,692,998
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
regulation of calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B involved_in IDA
EXP		 PMID:7832825 SynGO PMID:7832825 PMID:7832825 RGD:13792530, RGD:13792530 NCBI chr 3:27,779,133...27,944,292
Ensembl chr 3:7,380,922...7,546,091 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in ISO (PMID:25209271) RGD PMID:25209271 NCBI chr 4:154,435,936...154,727,987
Ensembl chr 4:152,767,419...153,055,639 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in ISO
IEA		 (PMID:25209271)
GO_REF:0000107		 RGD
Ensembl		 PMID:25209271 GO_REF:0000107 NCBI chr16:2,819,399...3,680,258
Ensembl chr16:2,848,620...3,670,776 		JBrowse link
G Prrt2 proline-rich transmembrane protein 2 involved_in ISO (PMID:27052163) RGD PMID:27052163 NCBI chr 1:191,054,962...191,059,632
Ensembl chr 1:181,604,545...181,628,850 		JBrowse link
G Rimbp2 RIMS binding protein 2 involved_in ISO (PMID:27671655) RGD PMID:27671655 NCBI chr12:33,383,646...33,582,259
Ensembl chr12:27,747,980...27,956,763 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in ISO (PMID:21241895) RGD PMID:21241895 NCBI chr 9:32,193,352...32,692,998
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in ISO (PMID:21241895) RGD PMID:21241895 NCBI chr 7:72,133,004...72,644,059
Ensembl chr 7:70,243,872...70,757,491 		JBrowse link
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in ISO
IEA
IBA		 (PMID:11163241)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:11163241 GO_REF:0000033 GO_REF:0000107 NCBI chr14:1,329,073...1,360,781 JBrowse link
G Cplx2 complexin 2 involved_in ISO
IEA
IBA		 (PMID:11163241)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:11163241 GO_REF:0000033 GO_REF:0000107 NCBI chr17:10,224,673...10,297,974
Ensembl chr17:10,222,347...10,293,855 		JBrowse link
G Cplx3 complexin 3 involved_in ISO
IEA
IBA		 (PMID:27239031)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:27239031 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:66,899,438...66,906,200
Ensembl chr 8:58,003,535...58,010,297 		JBrowse link
G Cplx4 complexin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:61,751,336...61,774,669
Ensembl chr18:59,481,986...59,497,778 		JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 acts_upstream_of_or_within ISO
IEA		 MGI:2668206 (PMID:12533602)
GO_REF:0000107		 RGD
Ensembl		 PMID:12533602 GO_REF:0000107 NCBI chr 1:89,733,736...89,795,769
Ensembl chr 1:80,605,892...80,667,125 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
MGI:3762127 (PMID:11359932)
(PMID:9194562)
GO_REF:0000107		 ParkinsonsUK-UCL
RGD
Ensembl		 PMID:9194562 PMID:11359932 GO_REF:0000024 GO_REF:0000107 NCBI chr16:18,718,164...18,722,273
Ensembl chr16:18,684,188...18,688,336 		JBrowse link
G Vamp1 vesicle-associated membrane protein 1 involved_in ISO (PMID:21282288) RGD PMID:21282288 NCBI chr 4:159,698,894...159,705,582
Ensembl chr 4:158,012,663...158,019,349 		JBrowse link
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prrt2 proline-rich transmembrane protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27052163)		 UniProt
RGD		 PMID:27052163 GO_REF:0000024 NCBI chr 1:191,054,962...191,059,632
Ensembl chr 1:181,604,545...181,628,850 		JBrowse link
G Snap23 synaptosome associated protein 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:127,966,184...127,999,929
Ensembl chr 3:107,514,131...107,544,320 		JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:144,494,579...144,576,449
Ensembl chr 3:124,041,898...124,123,760 		JBrowse link
G Snap29 synaptosome associated protein 29 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:97,082,721...97,113,195
Ensembl chr11:83,578,489...83,608,958 		JBrowse link
G Snap47 synaptosome associated protein 47 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:44,692,430...44,733,986
Ensembl chr10:44,191,218...44,234,424 		JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (PMID:19217378) RGD PMID:19217378 NCBI chr 2:178,269,157...178,271,746
Ensembl chr 2:175,971,257...175,974,231 		JBrowse link
G Stx11 syntaxin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:9,111,216...9,140,227
Ensembl chr 1:7,289,976...7,320,164 		JBrowse link
G Stx1b syntaxin 1B involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:24587181)		 Ensembl
GO_Central
RGD		 PMID:24587181 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:191,846,016...191,864,878
Ensembl chr 1:182,415,546...182,441,280 		JBrowse link
G Stx2 syntaxin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:33,315,447...33,350,788
Ensembl chr12:27,689,819...27,714,751 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      cellular component organization or biogenesis 7104
        cellular component organization 6817
          membrane organization 829
            synaptic vesicle membrane organization 39
              negative regulation of synaptic vesicle membrane organization + 0
              positive regulation of synaptic vesicle membrane organization + 20
              regulation of synaptic vesicle membrane organization + 27
              synaptic vesicle fusion to presynaptic active zone membrane + 35
paths to the root