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ONTOLOGY REPORT - ANNOTATIONS

Term:coated membrane
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Accession:GO:0048475 term browser browse the term
Definition:A single or double lipid bilayer with any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes.

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AP-1 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936491:9,298,338...9,422,945
Ensembl chrNW_004936491:9,376,086...9,422,951 		JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:21,983,248...22,063,133
Ensembl chrNW_004936475:21,983,248...22,063,181 		JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936722:851,182...859,238
Ensembl chrNW_004936722:851,917...859,052 		JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936543:1,052,692...1,058,070
Ensembl chrNW_004936543:1,052,732...1,058,483 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936470:5,260,984...5,301,552
Ensembl chrNW_004936470:5,257,542...5,289,469 		JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936621:464,993...472,608
Ensembl chrNW_004936621:464,507...472,642 		JBrowse link
G LOC101955400 AP-1 complex subunit sigma-3 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936569:5,574,591...5,604,948
Ensembl chrNW_004936569:5,490,319...5,544,250
Ensembl chrNW_004936569:5,490,319...5,544,250 		JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of ISO
IEA		 RGD
TreeGrafter		 PMID:14724281 GO_REF:0000118 RGD:2317430 NCBI chrNW_004936728:703,688...706,317
Ensembl chrNW_004936728:704,290...705,885 		JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936664:3,562,800...3,596,983
Ensembl chrNW_004936664:3,562,798...3,599,791 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936888:689,673...735,119
Ensembl chrNW_004936888:689,727...733,541 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Btbd8 BTB domain containing 8 located_in ISO PMID:29262337 UniProt PMID:29262337 RGD:13601995 NCBI chrNW_004936537:6,899,271...6,977,420
Ensembl chrNW_004936537:6,895,569...6,915,849 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (PMID:17626015) UniProt PMID:17626015 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:4,815,222...5,015,250
Ensembl chrNW_004936591:4,817,184...5,016,140 		JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of ISO
IEA		 RGD
TreeGrafter		 PMID:14724281 GO_REF:0000118 RGD:2317430 NCBI chrNW_004936728:703,688...706,317
Ensembl chrNW_004936728:704,290...705,885 		JBrowse link
G Tbc1d5 TBC1 domain family member 5 part_of
located_in		 IEA
ISO		 (PMID:24603492) Ensembl
UniProt		 PMID:24603492 GO_REF:0000107 NCBI chrNW_004936473:9,868,657...10,294,554
Ensembl chrNW_004936473:9,868,430...10,188,484 		JBrowse link
AP-3 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936483:17,301,969...17,336,962
Ensembl chrNW_004936483:17,298,291...17,337,578 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936588:1,223,646...1,262,577
Ensembl chrNW_004936588:1,222,466...1,262,676 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936742:1,007,684...1,088,272
Ensembl chrNW_004936742:1,007,973...1,088,394 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 part_of IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936483:15,613,474...15,660,862
Ensembl chrNW_004936483:15,613,474...15,660,838 		JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,022,928...4,035,577
Ensembl chrNW_004936542:4,023,134...4,035,260 		JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes part_of ISO (PMID:21411634) UniProt PMID:21411634 NCBI chrNW_004936485:15,879,324...15,900,544
Ensembl chrNW_004936485:15,879,327...15,900,544 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,289,487...4,297,634
Ensembl chrNW_004936471:4,289,415...4,298,852 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes part_of
located_in		 IEA
ISO		 (PMID:21411634) Ensembl
UniProt		 PMID:21411634 GO_REF:0000107 NCBI chrNW_004936558:2,227,305...2,257,725
Ensembl chrNW_004936558:2,227,253...2,257,722 		JBrowse link
G Vps39 VPS39 subunit of HOPS complex part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:5,457,363...5,512,966
Ensembl chrNW_004936471:5,457,035...5,512,625 		JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in
part_of		 ISO
IEA		 (PMID:21411634) UniProt
Ensembl		 PMID:21411634 GO_REF:0000107 NCBI chrNW_004936478:14,296,191...14,454,650
Ensembl chrNW_004936478:14,293,108...14,454,707 		JBrowse link
AP-4 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936690:2,255,159...2,265,833
Ensembl chrNW_004936690:2,255,159...2,265,847 		JBrowse link
G Ap4e1 adaptor related protein complex 4 subunit epsilon 1 part_of IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936471:12,857,259...12,919,615
Ensembl chrNW_004936471:12,857,323...12,916,718 		JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:246,335...250,278
Ensembl chrNW_004936543:246,335...254,975 		JBrowse link
G Ap4s1 adaptor related protein complex 4 subunit sigma 1 part_of ISO (PMID:10066790) UniProt PMID:10066790 NCBI chrNW_004936494:5,720,474...5,758,888 JBrowse link
G Tepsin TEPSIN adaptor related protein complex 4 accessory protein located_in ISO PMID:22472443 UniProt PMID:22472443 RGD:11250428 NCBI chrNW_004936594:4,942,079...4,949,590
Ensembl chrNW_004936594:4,940,979...4,949,633 		JBrowse link
AP-5 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936765:1,112,333...1,123,244
Ensembl chrNW_004936765:1,111,882...1,123,316 		JBrowse link
AP-type membrane coat adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5b1 adaptor related protein complex 5 subunit beta 1 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:3,750,553...3,753,601
Ensembl chrNW_004936599:3,750,512...3,754,291 		JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936495:1,862,790...1,900,955 JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 part_of IEA TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:14,880,338...14,884,383
Ensembl chrNW_004936485:14,877,206...14,884,369 		JBrowse link
clathrin adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936657:3,343,675...3,395,877
Ensembl chrNW_004936657:3,341,242...3,395,957 		JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936596:4,322,032...4,347,392
Ensembl chrNW_004936596:4,318,452...4,347,392 		JBrowse link
G Ap1m2 adaptor related protein complex 1 subunit mu 2 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936659:844,563...854,556
Ensembl chrNW_004936659:844,553...854,655 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936521:5,023,896...5,050,822 JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936785:503,615...525,361
Ensembl chrNW_004936785:508,848...525,391 		JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936690:2,255,159...2,265,833
Ensembl chrNW_004936690:2,255,159...2,265,847 		JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936543:246,335...250,278
Ensembl chrNW_004936543:246,335...254,975 		JBrowse link
G LOC101954375 AP-3 complex subunit mu-1-like part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936613:1,675,209...1,677,312 JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 ISO RGD PMID:12564930 RGD:727577 NCBI chrNW_004936653:3,667,518...3,702,203
Ensembl chrNW_004936653:3,667,513...3,702,203 		JBrowse link
clathrin coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Clta clathrin light chain A part_of ISO
IEA		 RGD
Ensembl		 PMID:1490999 PMID:17978091 GO_REF:0000107 RGD:2303177 RGD:2303184 NCBI chrNW_004936524:4,170,425...4,191,951
Ensembl chrNW_004936524:4,169,732...4,191,951 		JBrowse link
G Cltb clathrin light chain B ISO RGD PMID:1490999 PMID:17978091 RGD:2303177 RGD:2303184 NCBI chrNW_004936597:665,365...689,867
Ensembl chrNW_004936597:662,725...689,873 		JBrowse link
G Cltc clathrin heavy chain part_of ISO
IEA		 RGD
Ensembl		 PMID:1490999 PMID:17978091 GO_REF:0000107 RGD:2303177 RGD:2303184 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Igf2r insulin like growth factor 2 receptor ISO RGD PMID:2971973 RGD:2303173 NCBI chrNW_004936489:11,447,043...11,523,695
Ensembl chrNW_004936489:11,447,038...11,524,174 		JBrowse link
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936618:4,283,240...4,815,571
Ensembl chrNW_004936618:4,283,349...4,812,036 		JBrowse link
clathrin coat of coated pit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin light chain A part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936524:4,170,425...4,191,951
Ensembl chrNW_004936524:4,169,732...4,191,951 		JBrowse link
G Cltb clathrin light chain B part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936597:665,365...689,867
Ensembl chrNW_004936597:662,725...689,873 		JBrowse link
G Cltc clathrin heavy chain part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Cltcl1 clathrin heavy chain like 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936619:3,181,890...3,276,305
Ensembl chrNW_004936619:3,181,516...3,276,328 		JBrowse link
G Dab2 DAB adaptor protein 2 part_of ISO (PMID:11247302) UniProt PMID:11247302 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:4,142,951...4,241,719
Ensembl chrNW_004936596:4,142,895...4,247,976 		JBrowse link
G LOC101969002 epidermal growth factor receptor substrate 15-like part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937146:133,312...136,047 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Synj1 synaptojanin 1 part_of ISO PMID:9428629 ParkinsonsUK-UCL PMID:9428629 RGD:11059574 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epn2 epsin 2 ISO RGD PMID:10567358 RGD:708327 NCBI chrNW_004936881:417,348...504,650
Ensembl chrNW_004936881:419,682...504,650 		JBrowse link
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin light chain A part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936524:4,170,425...4,191,951
Ensembl chrNW_004936524:4,169,732...4,191,951 		JBrowse link
G Cltb clathrin light chain B part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936597:665,365...689,867
Ensembl chrNW_004936597:662,725...689,873 		JBrowse link
G Cltc clathrin heavy chain part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Cltcl1 clathrin heavy chain like 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936619:3,181,890...3,276,305
Ensembl chrNW_004936619:3,181,516...3,276,328 		JBrowse link
G Dnm1l dynamin 1 like NOT|part_of ISO PMID:9472031 ParkinsonsUK-UCL PMID:9472031 RGD:11535088 NCBI chrNW_004936607:3,576,357...3,632,423
Ensembl chrNW_004936607:3,576,392...3,632,554 		JBrowse link
G Synrg synergin gamma part_of ISO
IEA		 RGD
TreeGrafter		 PMID:10477754 GO_REF:0000118 RGD:631945 NCBI chrNW_004936490:776,939...840,019
Ensembl chrNW_004936490:776,896...840,022 		JBrowse link
clathrin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 part_of ISO PMID:11877461 UniProt PMID:11877461 RGD:8553925 NCBI chrNW_004936491:13,720,687...13,897,899
Ensembl chrNW_004936491:13,729,727...13,897,923 		JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,061,745...3,090,151
Ensembl chrNW_004936492:3,061,789...3,089,799 		JBrowse link
G Clta clathrin light chain A part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:4,170,425...4,191,951
Ensembl chrNW_004936524:4,169,732...4,191,951 		JBrowse link
G Cltc clathrin heavy chain part_of IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Cltcl1 clathrin heavy chain like 1 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936619:3,181,890...3,276,305
Ensembl chrNW_004936619:3,181,516...3,276,328 		JBrowse link
G Sclt1 sodium channel and clathrin linker 1 ISO RGD PMID:15797711 RGD:1359053 NCBI chrNW_004936642:1,984,936...2,146,707
Ensembl chrNW_004936642:1,984,529...2,146,949 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 ISO RGD PMID:15797711 RGD:1359053 NCBI chrNW_004936473:28,010,123...28,102,124
Ensembl chrNW_004936473:28,010,123...28,102,124 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes part_of
located_in		 IEA
ISO		 (PMID:21411634) Ensembl
UniProt		 PMID:21411634 GO_REF:0000107 NCBI chrNW_004936558:2,227,305...2,257,725
Ensembl chrNW_004936558:2,227,253...2,257,722 		JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in
part_of		 ISO
IEA		 (PMID:21411634) UniProt
Ensembl		 PMID:21411634 GO_REF:0000107 NCBI chrNW_004936478:14,296,191...14,454,650
Ensembl chrNW_004936478:14,293,108...14,454,707 		JBrowse link
clathrin vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clint1 clathrin interactor 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936515:5,391,139...5,419,919
Ensembl chrNW_004936515:5,391,262...5,418,546 		JBrowse link
G Clta clathrin light chain A part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:4,170,425...4,191,951
Ensembl chrNW_004936524:4,169,732...4,191,951 		JBrowse link
G Cltb clathrin light chain B part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936597:665,365...689,867
Ensembl chrNW_004936597:662,725...689,873 		JBrowse link
G Enthd1 ENTH domain containing 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:1,832,241...1,948,704
Ensembl chrNW_004936492:1,832,241...1,948,562 		JBrowse link
G Epn1 epsin 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936981:194,176...213,021
Ensembl chrNW_004936981:194,157...213,066 		JBrowse link
G Epn2 epsin 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936881:417,348...504,650
Ensembl chrNW_004936881:419,682...504,650 		JBrowse link
G Epn3 epsin 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:11,174,552...11,184,516
Ensembl chrNW_004936490:11,174,276...11,184,517 		JBrowse link
G Necap1 NECAP endocytosis associated 1 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936892:372,743...385,127
Ensembl chrNW_004936892:372,284...385,202 		JBrowse link
G Necap2 NECAP endocytosis associated 2 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:3,892,608...3,906,548
Ensembl chrNW_004936474:3,892,608...3,906,558 		JBrowse link
COPI vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 part_of IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936542:3,605,553...3,634,889
Ensembl chrNW_004936542:3,617,051...3,633,132 		JBrowse link
G Copa COPI coat complex subunit alpha part_of IEA TreeGrafter
UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936740:301,928...347,323
Ensembl chrNW_004936740:301,853...346,746 		JBrowse link
G Copb1 COPI coat complex subunit beta 1 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936528:4,211,670...4,249,103
Ensembl chrNW_004936528:4,211,304...4,249,176 		JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936540:1,467,169...1,493,218
Ensembl chrNW_004936540:1,467,169...1,493,258 		JBrowse link
G Cope COPI coat complex subunit epsilon part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:2,422,988...2,439,567
Ensembl chrNW_004936596:2,422,947...2,439,749 		JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936798:238,741...259,962
Ensembl chrNW_004936798:238,571...260,083 		JBrowse link
G Copg2 COPI coat complex subunit gamma 2 part_of IEA TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936579:4,648,006...4,782,815
Ensembl chrNW_004936579:4,647,946...4,785,336 		JBrowse link
G Copz1 COPI coat complex subunit zeta 1 part_of IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:11,520,085...11,544,722
Ensembl chrNW_004936512:11,520,095...11,544,720 		JBrowse link
G Copz2 COPI coat complex subunit zeta 2 part_of IEA TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936490:13,293,883...13,305,622 JBrowse link
G Dipk2a divergent protein kinase domain 2A part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936519:10,966,822...10,988,311
Ensembl chrNW_004936519:10,966,619...10,988,352 		JBrowse link
G LOC101958026 coatomer subunit zeta-1-like part_of IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936616:1,880,066...1,880,720 JBrowse link
G Scyl1 SCY1 like pseudokinase 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,918,325...3,928,415
Ensembl chrNW_004936599:3,918,469...3,928,421 		JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 part_of ISO PMID:15718469 UniProt PMID:15718469 RGD:1599272 NCBI chrNW_004936471:37,478,225...37,486,795
Ensembl chrNW_004936471:37,478,097...37,486,809 		JBrowse link
COPII vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cideb cell death inducing DFFA like effector b part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:241,484...249,935
Ensembl chrNW_004936722:245,567...249,917 		JBrowse link
G Klhl12 kelch like family member 12 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,681,421...1,714,150
Ensembl chrNW_004936567:1,680,286...1,716,235 		JBrowse link
G Pdcd6 programmed cell death 6 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:1,129,367...1,144,020
Ensembl chrNW_004936815:1,129,352...1,143,992 		JBrowse link
G Pef1 penta-EF-hand domain containing 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:14,745,812...14,761,279
Ensembl chrNW_004936474:14,745,677...14,761,395 		JBrowse link
G Sar1a secretion associated Ras related GTPase 1A is_active_in
part_of		 ISO
IEA		 (PMID:32358066) UniProt
Ensembl		 PMID:32358066 GO_REF:0000107 NCBI chrNW_004936521:8,422,511...8,439,945
Ensembl chrNW_004936521:8,422,446...8,441,333 		JBrowse link
G Sar1b secretion associated Ras related GTPase 1B is_active_in ISO (PMID:32358066) UniProt PMID:32358066 NCBI chrNW_004936647:697,930...723,577 JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936602:3,013,490...3,030,489
Ensembl chrNW_004936602:3,013,337...3,030,486 		JBrowse link
G Sec23a SEC23 homolog A, COPII coat complex component part_of IEA TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936494:12,643,790...12,702,390
Ensembl chrNW_004936494:12,642,870...12,699,218 		JBrowse link
G Sec23b SEC23 homolog B, COPII coat complex component part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936485:1,743,848...1,781,824
Ensembl chrNW_004936485:1,741,544...1,782,034 		JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component part_of IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936647:612,640...689,963
Ensembl chrNW_004936647:612,976...688,552 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component part_of IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936563:676,564...772,877
Ensembl chrNW_004936563:712,029...772,101 		JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936521:5,374,555...5,402,123 JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component part_of IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936869:485,706...566,591
Ensembl chrNW_004936869:522,706...563,704 		JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936738:1,664,916...1,741,739
Ensembl chrNW_004936738:1,676,436...1,744,896 		JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936600:5,129,047...5,162,416
Ensembl chrNW_004936600:5,129,947...5,162,427 		JBrowse link
membrane coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936657:3,343,675...3,395,877
Ensembl chrNW_004936657:3,341,242...3,395,957 		JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:21,983,248...22,063,133
Ensembl chrNW_004936475:21,983,248...22,063,181 		JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936722:851,182...859,238
Ensembl chrNW_004936722:851,917...859,052 		JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936543:1,052,692...1,058,070
Ensembl chrNW_004936543:1,052,732...1,058,483 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936470:5,260,984...5,301,552
Ensembl chrNW_004936470:5,257,542...5,289,469 		JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936664:3,562,800...3,596,983
Ensembl chrNW_004936664:3,562,798...3,599,791 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936888:689,673...735,119
Ensembl chrNW_004936888:689,727...733,541 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936483:17,301,969...17,336,962
Ensembl chrNW_004936483:17,298,291...17,337,578 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936588:1,223,646...1,262,577
Ensembl chrNW_004936588:1,222,466...1,262,676 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936742:1,007,684...1,088,272
Ensembl chrNW_004936742:1,007,973...1,088,394 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936483:15,613,474...15,660,862
Ensembl chrNW_004936483:15,613,474...15,660,838 		JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936690:2,255,159...2,265,833
Ensembl chrNW_004936690:2,255,159...2,265,847 		JBrowse link
G Ap4e1 adaptor related protein complex 4 subunit epsilon 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:12,857,259...12,919,615
Ensembl chrNW_004936471:12,857,323...12,916,718 		JBrowse link
G Chmp1b charged multivesicular body protein 1B part_of ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004936626:391,942...394,440 JBrowse link
G Chmp2a charged multivesicular body protein 2A part_of ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004937062:133,361...136,329 JBrowse link
G Chmp4a charged multivesicular body protein 4A part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:341,066...344,928
Ensembl chrNW_004936722:341,307...345,104 		JBrowse link
G Chmp4b charged multivesicular body protein 4B part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,756,360...6,798,964
Ensembl chrNW_004936561:6,756,307...6,799,290 		JBrowse link
G Cltc clathrin heavy chain part_of ISO (PMID:11879655) MGI PMID:11879655 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:1,467,169...1,493,218
Ensembl chrNW_004936540:1,467,169...1,493,258 		JBrowse link
G Dnm1 dynamin 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G LOC101955400 AP-1 complex subunit sigma-3 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936569:5,574,591...5,604,948
Ensembl chrNW_004936569:5,490,319...5,544,250
Ensembl chrNW_004936569:5,490,319...5,544,250 		JBrowse link
G Synj1 synaptojanin 1 part_of ISO (PMID:11879655) MGI PMID:11879655 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970831 serotransferrin part_of ISO (PMID:22792322) MGI PMID:22792322 NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394 		JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:1,664,916...1,741,739
Ensembl chrNW_004936738:1,676,436...1,744,896 		JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:5,129,047...5,162,416
Ensembl chrNW_004936600:5,129,947...5,162,427 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18223
    cellular anatomical structure 18002
      membrane 8261
        coated membrane 101
          membrane coat + 101
paths to the root