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ONTOLOGY REPORT - ANNOTATIONS

Term:coated membrane
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Accession:GO:0048475 term browser browse the term
Definition:A single or double lipid bilayer with any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes.

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AP-1 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:8,903,681...8,967,033 JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624820:9,011,251...9,019,487
Ensembl chrNW_004624820:9,011,345...9,019,487 		JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624740:16,111,004...16,117,075
Ensembl chrNW_004624740:16,111,004...16,116,992 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624829:608,065...637,096
Ensembl chrNW_004624829:608,065...634,479 		JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624823:1,438,830...1,498,903
Ensembl chrNW_004624823:1,438,864...1,500,116 		JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:394,718...401,828
Ensembl chrNW_004624734:394,627...401,296 		JBrowse link
G LOC101697909 AP-1 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624978:410,502...411,235 JBrowse link
G LOC101717662 AP-1 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624765:24,493,581...24,494,042 JBrowse link
G LOC101721754 AP-1 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:28,665,626...28,666,210 JBrowse link
G LOC110347946 aftiphilin-like part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:38,016,601...38,019,513 JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IEA
ISO		 TreeGrafter
RGD		 PMID:14724281 GO_REF:0000118 RGD:2317430 NCBI chrNW_004624928:403,114...405,560
Ensembl chrNW_004624928:403,503...405,095 		JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chrNW_004624832:4,513,977...4,540,080
Ensembl chrNW_004624832:4,513,977...4,540,277 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000117 NCBI chrNW_004624766:21,568,217...21,616,389
Ensembl chrNW_004624766:21,567,050...21,616,392 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:12086608)
(PMID:23676497)		 CAFA
UniProt		 PMID:12086608 PMID:23676497 NCBI chrNW_004624875:3,085,518...3,206,930
Ensembl chrNW_004624875:3,090,656...3,208,593 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of ISO PMID:12086608
(PMID:23676497)		 CAFA
UniProt		 PMID:12086608 PMID:23676497 RGD:12793054 NCBI chrNW_004624730:72,386,376...72,395,392 JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of ISO
IEA		 RGD
InterPro		 PMID:7593184 GO_REF:0000002 RGD:2306270 NCBI chrNW_004624832:6,788,149...6,797,026
Ensembl chrNW_004624832:6,787,149...6,797,131 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (PMID:17626015) UniProt PMID:17626015 NCBI chrNW_004624859:1,584,024...1,754,395 JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of ISO (PMID:17626015) UniProt PMID:17626015 NCBI chrNW_004624742:28,245,140...28,439,705
Ensembl chrNW_004624742:28,247,127...28,439,482 		JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IEA
ISO		 TreeGrafter
RGD		 PMID:14724281 GO_REF:0000118 RGD:2317430 NCBI chrNW_004624928:403,114...405,560
Ensembl chrNW_004624928:403,503...405,095 		JBrowse link
G Tbc1d5 TBC1 domain family member 5 located_in ISO (PMID:24603492) UniProt PMID:24603492 NCBI chrNW_004624821:2,398,211...3,068,212
Ensembl chrNW_004624821:2,398,042...2,806,263 		JBrowse link
AP-3 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624768:18,476,562...18,507,933
Ensembl chrNW_004624768:18,476,447...18,507,998 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624828:6,710,081...6,750,315
Ensembl chrNW_004624828:6,710,025...6,749,434 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:5,979,644...6,045,777
Ensembl chrNW_004624733:5,979,734...6,045,721 		JBrowse link
G LOC101700533 AP-3 complex subunit sigma-1-like part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624755:20,511,460...20,512,029 JBrowse link
G LOC101707009 AP-3 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624768:16,880,431...16,949,936
Ensembl chrNW_004624768:16,880,431...16,950,760 		JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,452,811...14,464,965
Ensembl chrNW_004624784:14,452,817...14,464,965 		JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes part_of ISO (PMID:21411634) UniProt PMID:21411634 NCBI chrNW_004624741:3,959,561...3,991,191
Ensembl chrNW_004624741:3,959,363...3,991,191 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes part_of ISO (PMID:21411634) UniProt PMID:21411634 NCBI chrNW_004624804:8,148,920...8,157,552
Ensembl chrNW_004624804:8,148,180...8,157,552 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes part_of
located_in		 IEA
ISO		 (PMID:21411634) Ensembl
UniProt		 PMID:21411634 GO_REF:0000107 NCBI chrNW_004624747:22,458,098...22,478,735
Ensembl chrNW_004624747:22,461,346...22,478,867 		JBrowse link
G Vps39 VPS39 subunit of HOPS complex part_of ISO (PMID:21411634) UniProt PMID:21411634 NCBI chrNW_004624804:9,286,614...9,337,149
Ensembl chrNW_004624804:9,284,104...9,337,892 		JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in ISO (PMID:21411634) UniProt PMID:21411634 NCBI chrNW_004624740:22,121,772...22,297,514
Ensembl chrNW_004624740:22,121,571...22,299,193 		JBrowse link
AP-4 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of ISO (PMID:10066790) UniProt PMID:10066790 NCBI chrNW_004624772:9,568,246...9,579,736
Ensembl chrNW_004624772:9,569,971...9,578,844 		JBrowse link
G Ap4e1 adaptor related protein complex 4 subunit epsilon 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624731:9,295,151...9,348,394
Ensembl chrNW_004624731:9,298,016...9,348,284 		JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of ISO (PMID:10066790), (PMID:11802162), (PMID:29180427) UniProt PMID:10066790 PMID:11802162 PMID:29180427 NCBI chrNW_004624740:16,883,725...16,887,678
Ensembl chrNW_004624740:16,883,828...16,887,685 		JBrowse link
G Ap4s1 adaptor related protein complex 4 subunit sigma 1 part_of ISO (PMID:10066790) UniProt PMID:10066790 NCBI chrNW_004624820:1,214,991...1,265,051
Ensembl chrNW_004624820:1,214,662...1,265,243 		JBrowse link
G Tepsin TEPSIN adaptor related protein complex 4 accessory protein located_in ISO PMID:22472443 UniProt PMID:22472443 RGD:11250428 NCBI chrNW_004624801:10,253,587...10,260,646
Ensembl chrNW_004624801:10,253,242...10,260,510 		JBrowse link
AP-5 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624740:28,509,979...28,527,813
Ensembl chrNW_004624740:28,509,230...28,527,519 		JBrowse link
AP-type membrane coat adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5b1 adaptor related protein complex 5 subunit beta 1 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:20,644,230...20,647,520
Ensembl chrNW_004624767:20,644,205...20,647,756 		JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624884:2,311,570...2,333,436
Ensembl chrNW_004624884:2,311,873...2,332,170 		JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624741:4,903,219...4,930,021
Ensembl chrNW_004624741:4,903,492...4,910,923 		JBrowse link
clathrin adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624747:5,703,647...5,755,344
Ensembl chrNW_004624747:5,704,477...5,755,321 		JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624908:1,046,728...1,060,591
Ensembl chrNW_004624908:1,043,785...1,061,329 		JBrowse link
G Ap1m2 adaptor related protein complex 1 subunit mu 2 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624828:2,638,202...2,647,591
Ensembl chrNW_004624828:2,637,257...2,677,720 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624875:3,085,518...3,206,930
Ensembl chrNW_004624875:3,090,656...3,208,593 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624730:72,386,376...72,395,392 JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624754:7,591,811...7,612,695
Ensembl chrNW_004624754:7,592,155...7,612,696 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624780:1,054,796...1,091,688
Ensembl chrNW_004624780:1,068,498...1,086,551 		JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624772:9,568,246...9,579,736
Ensembl chrNW_004624772:9,569,971...9,578,844 		JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624740:16,883,725...16,887,678
Ensembl chrNW_004624740:16,883,828...16,887,685 		JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 ISO RGD PMID:12564930 RGD:727577 NCBI chrNW_004624739:18,733,055...18,772,468
Ensembl chrNW_004624739:18,735,922...18,772,465 		JBrowse link
clathrin coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chrNW_004624875:3,085,518...3,206,930
Ensembl chrNW_004624875:3,090,656...3,208,593 		JBrowse link
G Clta clathrin light chain A part_of ISO (PMID:11756460) RGD
CAFA		 PMID:1490999 PMID:11756460 PMID:17978091 RGD:2303177 RGD:2303184 NCBI chrNW_004624868:4,419,554...4,443,475
Ensembl chrNW_004624868:4,419,554...4,443,477 		JBrowse link
G Cltb clathrin light chain B ISO RGD PMID:1490999 PMID:17978091 RGD:2303177 RGD:2303184 NCBI chrNW_004624733:13,707,594...13,738,814
Ensembl chrNW_004624733:13,707,155...13,738,814 		JBrowse link
G Cltc clathrin heavy chain part_of ISO (PMID:11756460) RGD
CAFA		 PMID:1490999 PMID:11756460 PMID:17978091 RGD:2303177 RGD:2303184 NCBI chrNW_004624871:1,439,975...1,507,514
Ensembl chrNW_004624871:1,439,838...1,510,911 		JBrowse link
G Igf2r insulin like growth factor 2 receptor ISO RGD PMID:2971973 RGD:2303173 NCBI chrNW_004624855:2,752,676...2,887,327
Ensembl chrNW_004624855:2,753,994...2,887,151 		JBrowse link
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 part_of ISO (PMID:24855057) UniProt PMID:24855057 NCBI chrNW_004624819:6,886,328...7,365,537
Ensembl chrNW_004624819:6,889,658...7,365,537 		JBrowse link
clathrin coat of coated pit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin light chain A part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624868:4,419,554...4,443,475
Ensembl chrNW_004624868:4,419,554...4,443,477 		JBrowse link
G Cltb clathrin light chain B part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:13,707,594...13,738,814
Ensembl chrNW_004624733:13,707,155...13,738,814 		JBrowse link
G Cltc clathrin heavy chain part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624871:1,439,975...1,507,514
Ensembl chrNW_004624871:1,439,838...1,510,911 		JBrowse link
G Dab2 DAB adaptor protein 2 part_of ISO (PMID:11247302) UniProt PMID:11247302 NCBI chrNW_004624759:15,459,436...15,520,225
Ensembl chrNW_004624759:15,459,288...15,520,924 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624859:1,584,024...1,754,395 JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:965,948...1,014,235
Ensembl chrNW_004624908:966,087...1,014,130 		JBrowse link
G LOC101708690 clathrin heavy chain 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624945:18,348...154,408
Ensembl chrNW_004624945:223...154,254 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein part_of ISO (PMID:10436022), (PMID:16262731) BHF-UCL PMID:10436022 PMID:16262731 NCBI chrNW_004624845:3,875,601...3,990,347
Ensembl chrNW_004624845:3,891,061...3,990,342 		JBrowse link
G Synj1 synaptojanin 1 part_of ISO PMID:9428629 ParkinsonsUK-UCL PMID:9428629 RGD:11059574 NCBI chrNW_004624745:20,881,312...20,984,242
Ensembl chrNW_004624745:20,881,317...20,984,184 		JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epn2 epsin 2 ISO RGD PMID:10567358 RGD:708327 NCBI chrNW_004624849:5,520,279...5,632,152
Ensembl chrNW_004624849:5,577,679...5,633,008 		JBrowse link
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin light chain A part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624868:4,419,554...4,443,475
Ensembl chrNW_004624868:4,419,554...4,443,477 		JBrowse link
G Cltb clathrin light chain B part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:13,707,594...13,738,814
Ensembl chrNW_004624733:13,707,155...13,738,814 		JBrowse link
G Cltc clathrin heavy chain part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624871:1,439,975...1,507,514
Ensembl chrNW_004624871:1,439,838...1,510,911 		JBrowse link
G Dnm1l dynamin 1 like NOT|part_of ISO PMID:9472031 ParkinsonsUK-UCL PMID:9472031 RGD:11535088 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G LOC101708690 clathrin heavy chain 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624945:18,348...154,408
Ensembl chrNW_004624945:223...154,254 		JBrowse link
G Synrg synergin gamma part_of ISO
IEA		 RGD
TreeGrafter		 PMID:10477754 GO_REF:0000118 RGD:631945 NCBI chrNW_004624871:4,505,693...4,593,472
Ensembl chrNW_004624871:4,509,428...4,593,337 		JBrowse link
clathrin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 part_of ISO PMID:11877461 UniProt PMID:11877461 RGD:8553925 NCBI chrNW_004624762:3,722,429...3,873,105
Ensembl chrNW_004624762:3,723,113...3,866,417 		JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 part_of ISO (PMID:21401524) dictyBase PMID:21401524 NCBI chrNW_004624752:9,841,970...9,873,073
Ensembl chrNW_004624752:9,841,886...9,873,067 		JBrowse link
G Clta clathrin light chain A part_of ISO (PMID:4066749) FlyBase PMID:4066749 NCBI chrNW_004624868:4,419,554...4,443,475
Ensembl chrNW_004624868:4,419,554...4,443,477 		JBrowse link
G Cltc clathrin heavy chain part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624871:1,439,975...1,507,514
Ensembl chrNW_004624871:1,439,838...1,510,911 		JBrowse link
G LOC101708690 clathrin heavy chain 2 part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624945:18,348...154,408
Ensembl chrNW_004624945:223...154,254 		JBrowse link
G Sclt1 sodium channel and clathrin linker 1 ISO RGD PMID:15797711 RGD:1359053 NCBI chrNW_004624777:9,735,573...9,911,795
Ensembl chrNW_004624777:9,735,612...9,911,442 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 ISO RGD PMID:15797711 RGD:1359053 NCBI chrNW_004624731:2,254,445...2,356,174
Ensembl chrNW_004624731:2,254,445...2,355,738 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes part_of
located_in		 IEA
ISO		 (PMID:21411634) Ensembl
UniProt		 PMID:21411634 GO_REF:0000107 NCBI chrNW_004624747:22,458,098...22,478,735
Ensembl chrNW_004624747:22,461,346...22,478,867 		JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in ISO (PMID:21411634) UniProt PMID:21411634 NCBI chrNW_004624740:22,121,772...22,297,514
Ensembl chrNW_004624740:22,121,571...22,299,193 		JBrowse link
clathrin vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clint1 clathrin interactor 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:31,612,485...31,693,277
Ensembl chrNW_004624733:31,611,772...31,696,446 		JBrowse link
G Clta clathrin light chain A part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624868:4,419,554...4,443,475
Ensembl chrNW_004624868:4,419,554...4,443,477 		JBrowse link
G Cltb clathrin light chain B part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:13,707,594...13,738,814
Ensembl chrNW_004624733:13,707,155...13,738,814 		JBrowse link
G Enthd1 ENTH domain containing 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:8,527,208...8,655,014
Ensembl chrNW_004624752:8,527,004...8,655,020 		JBrowse link
G Epn1 epsin 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:1,732,895...1,746,963
Ensembl chrNW_004624832:1,732,571...1,746,888 		JBrowse link
G Epn2 epsin 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:5,520,279...5,632,152
Ensembl chrNW_004624849:5,577,679...5,633,008 		JBrowse link
G Epn3 epsin 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:6,418,568...6,427,624
Ensembl chrNW_004624795:6,418,770...6,428,013 		JBrowse link
G LOC101721043 epsin-2-like part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:14,437,118...14,463,070 JBrowse link
G Necap1 NECAP endocytosis associated 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624860:5,224,170...5,237,235
Ensembl chrNW_004624860:5,223,610...5,237,451 		JBrowse link
G Necap2 NECAP endocytosis associated 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:2,543,826...2,557,249
Ensembl chrNW_004624764:2,543,918...2,556,163 		JBrowse link
COPI vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 part_of IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624784:13,973,631...14,011,921
Ensembl chrNW_004624784:13,973,551...14,013,693 		JBrowse link
G Copa COPI coat complex subunit alpha part_of IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624794:923,460...971,266
Ensembl chrNW_004624794:922,709...971,605 		JBrowse link
G Copb1 COPI coat complex subunit beta 1 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624766:6,329,528...6,376,725
Ensembl chrNW_004624766:6,335,063...6,376,637 		JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624730:15,908,551...15,936,886
Ensembl chrNW_004624730:15,908,551...15,936,856 		JBrowse link
G Cope COPI coat complex subunit epsilon part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:1,951,845...1,963,474
Ensembl chrNW_004624908:1,951,403...1,963,459 		JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624872:299,625...320,974 JBrowse link
G Copg2 COPI coat complex subunit gamma 2 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624783:5,670,069...5,798,150
Ensembl chrNW_004624783:5,670,115...5,797,847 		JBrowse link
G Copz1 COPI coat complex subunit zeta 1 part_of IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624904:2,351,010...2,374,284
Ensembl chrNW_004624904:2,350,989...2,372,824 		JBrowse link
G Copz2 COPI coat complex subunit zeta 2 part_of IEA InterPro
UniProt
TreeGrafter		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624795:4,631,483...4,639,578
Ensembl chrNW_004624795:4,631,371...4,639,622 		JBrowse link
G Dipk2a divergent protein kinase domain 2A part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:20,633,816...20,655,815 JBrowse link
G LOC101721529 coatomer subunit gamma-1-like part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004625375:3,289...8,745 JBrowse link
G Scyl1 SCY1 like pseudokinase 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,861,037...20,872,127
Ensembl chrNW_004624767:20,861,039...20,872,090 		JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 part_of ISO PMID:15718469 UniProt PMID:15718469 RGD:1599272 NCBI chrNW_004624941:407,043...414,667
Ensembl chrNW_004624941:406,953...418,748 		JBrowse link
COPII vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cideb cell death inducing DFFA like effector b part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,196,608...8,199,346
Ensembl chrNW_004624820:8,196,653...8,199,367 		JBrowse link
G Klhl12 kelch like family member 12 part_of ISO (PMID:27716508) UniProt PMID:27716508 NCBI chrNW_004624807:7,919,216...7,948,254
Ensembl chrNW_004624807:7,919,700...7,948,217 		JBrowse link
G Pdcd6 programmed cell death 6 part_of ISO (PMID:27716508) UniProt PMID:27716508 NCBI chrNW_004624751:99,835...120,963
Ensembl chrNW_004624751:99,860...120,963 		JBrowse link
G Pef1 penta-EF-hand domain containing 1 part_of ISO (PMID:27716508) UniProt PMID:27716508 NCBI chrNW_004624764:14,872,646...14,889,307
Ensembl chrNW_004624764:14,873,415...14,889,139 		JBrowse link
G Sar1a secretion associated Ras related GTPase 1A is_active_in
part_of		 ISO (PMID:32358066)
(PMID:17499046)		 UniProt PMID:17499046 PMID:32358066 NCBI chrNW_004624754:4,314,596...4,332,902
Ensembl chrNW_004624754:4,314,596...4,332,846 		JBrowse link
G Sar1b secretion associated Ras related GTPase 1B part_of
is_active_in		 IEA
ISO		 (PMID:32358066) Ensembl
UniProt		 PMID:32358066 GO_REF:0000107 NCBI chrNW_004624733:37,704,577...37,733,773
Ensembl chrNW_004624733:37,704,590...37,733,933 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624731:5,194,852...5,217,821
Ensembl chrNW_004624731:5,194,961...5,217,821 		JBrowse link
G Sec23a SEC23 homolog A, COPII coat complex component part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624813:8,502,473...8,558,078
Ensembl chrNW_004624813:8,499,721...8,558,110 		JBrowse link
G Sec23b SEC23 homolog B, COPII coat complex component part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624741:19,222,584...19,255,400
Ensembl chrNW_004624741:19,222,628...19,259,735 		JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624733:37,620,326...37,693,753
Ensembl chrNW_004624733:37,620,211...37,693,636 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624830:268,764...334,660 JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624754:7,261,770...7,288,874
Ensembl chrNW_004624754:7,261,511...7,288,869 		JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624867:5,536,888...5,631,867 JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:8,040,894...8,122,785 JBrowse link
membrane coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624747:5,703,647...5,755,344
Ensembl chrNW_004624747:5,704,477...5,755,321 		JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624820:9,011,251...9,019,487
Ensembl chrNW_004624820:9,011,345...9,019,487 		JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624740:16,111,004...16,117,075
Ensembl chrNW_004624740:16,111,004...16,116,992 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624829:608,065...637,096
Ensembl chrNW_004624829:608,065...634,479 		JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624823:1,438,830...1,498,903
Ensembl chrNW_004624823:1,438,864...1,500,116 		JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624832:4,513,977...4,540,080
Ensembl chrNW_004624832:4,513,977...4,540,277 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624766:21,568,217...21,616,389
Ensembl chrNW_004624766:21,567,050...21,616,392 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624875:3,085,518...3,206,930
Ensembl chrNW_004624875:3,090,656...3,208,593 		JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624832:6,788,149...6,797,026
Ensembl chrNW_004624832:6,787,149...6,797,131 		JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624768:18,476,562...18,507,933
Ensembl chrNW_004624768:18,476,447...18,507,998 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624828:6,710,081...6,750,315
Ensembl chrNW_004624828:6,710,025...6,749,434 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:5,979,644...6,045,777
Ensembl chrNW_004624733:5,979,734...6,045,721 		JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624772:9,568,246...9,579,736
Ensembl chrNW_004624772:9,569,971...9,578,844 		JBrowse link
G Ap4e1 adaptor related protein complex 4 subunit epsilon 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624731:9,295,151...9,348,394
Ensembl chrNW_004624731:9,298,016...9,348,284 		JBrowse link
G Chmp1b charged multivesicular body protein 1B part_of ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004624770:19,487,040...19,489,740 JBrowse link
G Chmp2a charged multivesicular body protein 2A part_of ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004624832:45,293...48,314 JBrowse link
G Chmp4a charged multivesicular body protein 4A part_of ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004624820:8,281,081...8,284,969 JBrowse link
G Chmp4b charged multivesicular body protein 4B part_of ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004624842:5,454,616...5,505,454
Ensembl chrNW_004624842:5,450,900...5,505,418 		JBrowse link
G Cltc clathrin heavy chain part_of ISO (PMID:11879655) MGI PMID:11879655 NCBI chrNW_004624871:1,439,975...1,507,514
Ensembl chrNW_004624871:1,439,838...1,510,911 		JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624730:15,908,551...15,936,886
Ensembl chrNW_004624730:15,908,551...15,936,856 		JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624872:299,625...320,974 JBrowse link
G Dnm1 dynamin 1 part_of ISO (PMID:11879655) MGI PMID:11879655 NCBI chrNW_004624760:6,605,902...6,646,575
Ensembl chrNW_004624760:6,604,787...6,646,622 		JBrowse link
G LOC101697909 AP-1 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624978:410,502...411,235 JBrowse link
G LOC101707009 AP-3 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624768:16,880,431...16,949,936
Ensembl chrNW_004624768:16,880,431...16,950,760 		JBrowse link
G LOC101717662 AP-1 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624765:24,493,581...24,494,042 JBrowse link
G LOC101721529 coatomer subunit gamma-1-like part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004625375:3,289...8,745 JBrowse link
G LOC101721754 AP-1 complex subunit sigma-2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:28,665,626...28,666,210 JBrowse link
G Synj1 synaptojanin 1 part_of ISO (PMID:11879655) MGI PMID:11879655 NCBI chrNW_004624745:20,881,312...20,984,242
Ensembl chrNW_004624745:20,881,317...20,984,184 		JBrowse link
vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101719398 serotransferrin part_of ISO (PMID:22792322) MGI PMID:22792322 NCBI chrNW_004624730:10,078,165...10,109,349 JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISO (PMID:22792322) MGI PMID:22792322 NCBI chrNW_004624757:8,040,894...8,122,785 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 17856
    cellular anatomical structure 17762
      membrane 8881
        coated membrane 104
          membrane coat + 104
paths to the root