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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of developmental pigmentation
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Accession:GO:0048070 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.
Synonyms:exact_synonym: regulation of pigmentation during development


show annotations for term's descendants           Sort by:
regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 acts_upstream_of_or_within ISO
IEA		 MGI:1916320|MGI:2675831|MGI:3766915|MGI:96677 (PMID:14138974), (PMID:18454205)
GO_REF:0000107		 RGD
Ensembl		 PMID:14138974 PMID:18454205 GO_REF:0000107 NCBI chr 7:125,396,227...125,528,020
Ensembl chr 7:125,397,734...125,527,777 		JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 acts_upstream_of_or_within ISO
IEA		 MGI:2660628 (PMID:18454205)
GO_REF:0000107		 RGD
Ensembl		 PMID:18454205 GO_REF:0000107 NCBI chr 4:126,847,726...127,019,924
Ensembl chr 4:125,291,490...125,462,929 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1197519 (PMID:15818405) RGD PMID:15818405 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within ISO MGI:88138 (PMID:15818405) RGD PMID:15818405 NCBI chr 3:135,820,042...135,857,330
Ensembl chr 3:115,366,646...115,404,068 		JBrowse link
G Edn3 endothelin 3 acts_upstream_of_or_within ISO MGI:1856392 (PMID:14138974) RGD PMID:14138974 NCBI chr 3:183,980,458...184,004,958
Ensembl chr 3:163,562,520...163,585,093 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO
IEA		 MGI:1856687 (PMID:12538872)
GO_REF:0000107		 RGD
Ensembl		 PMID:12538872 GO_REF:0000107 NCBI chr12:38,685,484...38,710,668
Ensembl chr12:33,024,650...33,051,393 		JBrowse link
negative regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tpcn2 two pore segment channel 2 involved_in ISO
IEA		 (PMID:27140606)
GO_REF:0000107
(PMID:27231233)		 RGD
Ensembl		 PMID:27140606 PMID:27231233 GO_REF:0000107 NCBI chr 1:209,845,827...209,875,561
Ensembl chr 1:200,416,540...200,446,236 		JBrowse link
negative regulation of eye pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:1934258 (PMID:17464332)
GO_REF:0000107		 RGD
Ensembl		 PMID:17464332 GO_REF:0000107 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
positive regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO
IEA		 MGI:99702 (PMID:9241272)
GO_REF:0000107		 RGD
Ensembl		 PMID:9241272 GO_REF:0000107 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:88138 (PMID:9241272) RGD PMID:9241272 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
positive regulation of melanocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 acts_upstream_of_or_within ISO
IEA		 MGI:1916320|MGI:3766915 (PMID:18454205)
GO_REF:0000107		 RGD
Ensembl		 PMID:18454205 GO_REF:0000107 NCBI chr 7:125,396,227...125,528,020
Ensembl chr 7:125,397,734...125,527,777 		JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 acts_upstream_of_or_within ISO
IEA		 MGI:2660628 (PMID:18454205)
GO_REF:0000107		 RGD
Ensembl		 PMID:18454205 GO_REF:0000107 NCBI chr 4:126,847,726...127,019,924
Ensembl chr 4:125,291,490...125,462,929 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2158305 (PMID:16427619) RGD PMID:16427619 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Kitlg KIT ligand acts_upstream_of_or_within ISO
IEA		 (PMID:16427619)
GO_REF:0000107		 RGD
Ensembl		 PMID:16427619 GO_REF:0000107 NCBI chr 7:36,782,621...36,863,796
Ensembl chr 7:34,896,053...34,977,214 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 involved_in ISO
IEA		 (PMID:24769727)
GO_REF:0000107		 RGD
Ensembl		 PMID:24769727 GO_REF:0000107 NCBI chr 3:49,624,028...49,754,323
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
positive regulation of pigment cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISO (PMID:17182842) RGD PMID:17182842 NCBI chr17:26,377,549...26,402,869
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17182842)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17182842 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:130,269,979...130,280,109
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
regulation of eye pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate acts_upstream_of_or_within ISO
IEA		 MGI:4460276 (PMID:22664872)
GO_REF:0000107		 RGD
Ensembl		 PMID:22664872 GO_REF:0000107 NCBI chr10:57,565,909...57,604,546
Ensembl chr10:57,066,897...57,105,957 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    pigmentation 109
      developmental pigmentation 56
        regulation of developmental pigmentation 14
          negative regulation of developmental pigmentation + 2
          positive regulation of developmental pigmentation + 8
          regulation of cuticle pigmentation + 0
          regulation of eye pigmentation + 2
          regulation of female pigmentation + 0
          regulation of male pigmentation + 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    biological regulation 13833
      regulation of biological process 13394
        regulation of pigmentation 16
          regulation of developmental pigmentation 14
            negative regulation of developmental pigmentation + 2
            positive regulation of developmental pigmentation + 8
            regulation of cuticle pigmentation + 0
            regulation of eye pigmentation + 2
            regulation of female pigmentation + 0
            regulation of male pigmentation + 0
paths to the root