ONTOLOGY REPORT - ANNOTATIONS |
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Term: | developmental pigmentation |
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Accession: | GO:0048066
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browse the term
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Definition: | The developmental process that results in the deposition of coloring matter in an organism, tissue or cell. |
Synonyms: | related_synonym: | pigmentation during development |
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AMACR |
alpha-methylacyl-CoA racemase |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr16:20,005,741...20,023,339
Ensembl chr16:19,956,366...20,023,289
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BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879
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BCL2L11 |
BCL2 like 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 3:45,156,791...45,202,996
Ensembl chr 3:45,160,155...45,201,186
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BLOC1S3 |
biogenesis of lysosomal organelles complex 1 subunit 3 |
acts_upstream_of_or_within |
ISO |
(PMID:15102850), (PMID:7203014) |
MGI |
PMID:7203014 PMID:15102850 |
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NCBI chr 6:51,590,497...51,591,222
Ensembl chr 6:51,590,497...51,591,222
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BLOC1S5 |
biogenesis of lysosomal organelles complex 1 subunit 5 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 7:5,324,467...5,363,346
Ensembl chr 7:5,321,655...5,363,538
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DCT |
dopachrome tautomerase |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:63,584,865...63,647,486
Ensembl chr11:63,584,869...63,678,344
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EDNRA |
endothelin receptor type A |
involved_in |
IBA |
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GO_Central |
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GO_REF:0000033 |
NCBI chr 8:81,210,750...81,279,053
Ensembl chr 8:81,209,327...81,276,853
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EDNRB |
endothelin receptor type B |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:50,073,300...50,102,879
Ensembl chr11:50,072,554...50,102,884
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GNA11 |
G protein subunit alpha 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:75,439,405...75,456,855
Ensembl chr 2:75,437,201...75,457,092
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GNAQ |
G protein subunit alpha q |
acts_upstream_of_or_within |
ISO |
(PMID:15322542) |
MGI |
PMID:15322542 |
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NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,265...230,907,674
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KIT |
KIT proto-oncogene, receptor tyrosine kinase |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 8:41,402,334...41,492,306
Ensembl chr 8:41,402,043...41,493,734
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MREG |
melanoregulin |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr15:118,208,681...118,273,725
Ensembl chr15:118,208,684...118,273,680
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MYO5A |
myosin VA |
acts_upstream_of_or_within |
ISO |
(PMID:15550542) |
MGI |
PMID:15550542 |
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NCBI chr 1:119,165,751...119,398,591
Ensembl chr 1:119,165,942...119,394,725
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OCA2 |
OCA2 melanosomal transmembrane protein |
acts_upstream_of_or_within |
ISO |
(PMID:11756244) |
MGI |
PMID:11756244 |
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NCBI chr15:56,657,648...56,869,920
Ensembl chr15:56,657,616...56,869,918
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PAX3 |
paired box 3 |
acts_upstream_of_or_within |
ISO |
(PMID:15322542) |
MGI |
PMID:15322542 |
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NCBI chr15:124,093,803...124,193,041
Ensembl chr15:124,094,295...124,193,011
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SLC45A2 |
solute carrier family 45 member 2 |
involved_in acts_upstream_of_or_within |
ISS IEA |
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UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr16:19,958,315...20,002,198
Ensembl chr16:19,956,366...20,023,289
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ZEB2 |
zinc finger E-box binding homeobox 2 |
involved_in |
ISO |
(PMID:24769727) |
BHF-UCL |
PMID:24769727 |
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NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
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ZIC2 |
Zic family member 2 |
acts_upstream_of_or_within |
ISO |
(PMID:10932191) |
MGI |
PMID:10932191 |
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NCBI chr11:68,840,802...68,845,441
Ensembl chr11:68,840,631...68,845,378
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ANKRD27 |
ankyrin repeat domain 27 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 6:42,501,167...42,559,926
Ensembl chr 6:42,501,165...42,559,912
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AP1G1 |
adaptor related protein complex 1 subunit gamma 1 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 6:14,719,949...14,809,821
Ensembl chr 6:14,719,959...14,809,491
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AP1M1 |
adaptor related protein complex 1 subunit mu 1 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:61,356,369...61,386,133
Ensembl chr 2:61,355,547...61,386,169
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AP3D1 |
adaptor related protein complex 3 subunit delta 1 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:76,428,443...76,471,266
Ensembl chr 2:76,428,476...76,471,257
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BLOC1S3 |
biogenesis of lysosomal organelles complex 1 subunit 3 |
involved_in |
ISS |
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UniProt |
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GO_REF:0000024 |
NCBI chr 6:51,590,497...51,591,222
Ensembl chr 6:51,590,497...51,591,222
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BLOC1S5 |
biogenesis of lysosomal organelles complex 1 subunit 5 |
involved_in |
ISS IEA |
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UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:5,324,467...5,363,346
Ensembl chr 7:5,321,655...5,363,538
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BLOC1S6 |
biogenesis of lysosomal organelles complex 1 subunit 6 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858
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CD63 |
CD63 molecule |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 5:21,172,275...21,176,225
Ensembl chr 5:21,172,283...21,176,232
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RAB32 |
RAB32, member RAS oncogene family |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:19,076,301...19,097,647
Ensembl chr 1:19,075,271...19,097,870
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RAB38 |
RAB38, member RAS oncogene family |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 9:21,577,083...21,640,637
Ensembl chr 9:21,577,033...21,640,115
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SOD2 |
superoxide dismutase 2 |
acts_upstream_of_or_within |
ISO |
(PMID:15205258) |
MGI |
PMID:15205258 |
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NCBI chr 1:7,679,352...7,689,564
Ensembl chr 1:7,679,352...7,689,560
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ATP6AP2 |
ATPase H+ transporting accessory protein 2 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr X:36,271,154...36,300,240
Ensembl chr X:36,271,223...36,300,240
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HPS1 |
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:21052544) |
MGI |
PMID:21052544 |
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NCBI chr14:109,730,597...109,755,288
Ensembl chr14:109,730,598...109,751,985
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VHL |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr13:66,334,535...66,342,401
Ensembl chr13:66,334,591...66,342,654
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ADAMTS20 |
ADAM metallopeptidase with thrombospondin type 1 motif 20 |
acts_upstream_of |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 5:74,502,098...74,672,703
Ensembl chr 5:74,503,113...74,672,703
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ADAMTS9 |
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
acts_upstream_of |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr13:46,033,753...46,209,238
Ensembl chr13:46,034,833...46,207,006
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BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of acts_upstream_of_or_within |
ISO IEA |
(PMID:16427619) |
MGI Ensembl |
PMID:16427619 |
GO_REF:0000107 |
NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879
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BLOC1S6 |
biogenesis of lysosomal organelles complex 1 subunit 6 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858
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CITED1 |
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 |
involved_in |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr X:58,179,084...58,184,778
Ensembl chr X:58,179,087...58,184,499
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EDN3 |
endothelin 3 |
acts_upstream_of_or_within |
ISO |
(PMID:9012511) |
MGI |
PMID:9012511 |
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NCBI chr17:59,418,667...59,448,382
Ensembl chr17:59,425,495...59,448,362
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EDNRB |
endothelin receptor type B |
acts_upstream_of_or_within |
ISO IEA |
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RGD Ensembl |
PMID:11709437 |
GO_REF:0000107 RGD:628459 |
NCBI chr11:50,073,300...50,102,879
Ensembl chr11:50,072,554...50,102,884
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ENPP1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
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GLI3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900
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HPS1 |
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11836498) |
MGI |
PMID:11836498 |
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NCBI chr14:109,730,597...109,755,288
Ensembl chr14:109,730,598...109,751,985
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HPS4 |
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr14:44,041,684...44,073,661
Ensembl chr14:44,049,707...44,073,621
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KIT |
KIT proto-oncogene, receptor tyrosine kinase |
involved_in |
ISS IEA |
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UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:41,402,334...41,492,306
Ensembl chr 8:41,402,043...41,493,734
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LOC100625684 |
olfactory receptor 51E2 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 9:5,431,098...5,434,483
Ensembl chr 9:5,432,611...5,433,573
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LRMDA |
leucine rich melanocyte differentiation associated |
involved_in |
IBA |
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GO_Central |
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GO_REF:0000033 |
NCBI chr14:77,957,833...79,051,540
Ensembl chr14:77,957,851...79,051,455
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MEF2C |
myocyte enhancer factor 2C |
involved_in |
ISS |
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UniProt |
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GO_REF:0000024 |
NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810
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MITF |
melanocyte inducing transcription factor |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:51,177,356...51,422,096
Ensembl chr13:51,178,203...51,422,093
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MLPH |
melanophilin |
acts_upstream_of_or_within |
ISO |
(PMID:11504925), (PMID:2379821) |
MGI |
PMID:2379821 PMID:11504925 |
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NCBI chr15:137,173,962...137,219,724
Ensembl chr15:137,174,009...137,219,713
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MREG |
melanoregulin |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr15:118,208,681...118,273,725
Ensembl chr15:118,208,684...118,273,680
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MYO5A |
myosin VA |
acts_upstream_of_or_within |
ISO |
(PMID:1996138), (PMID:2379821), (PMID:7828830) |
MGI |
PMID:1996138 PMID:2379821 PMID:7828830 |
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NCBI chr 1:119,165,751...119,398,591
Ensembl chr 1:119,165,942...119,394,725
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OCA2 |
OCA2 melanosomal transmembrane protein |
acts_upstream_of_or_within involved_in |
ISO IBA |
(PMID:2379821) |
MGI GO_Central |
PMID:2379821 |
GO_REF:0000033 |
NCBI chr15:56,657,648...56,869,920
Ensembl chr15:56,657,616...56,869,918
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RAB27A |
RAB27A, member RAS oncogene family |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:116,532,816...116,606,477
Ensembl chr 1:116,532,974...116,606,474
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SOX10 |
SRY-box transcription factor 10 |
involved_in acts_upstream_of_or_within |
ISS IEA |
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AgBase Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:9,890,439...9,901,746
Ensembl chr 5:9,891,525...9,901,743
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TYRP1 |
tyrosinase related protein 1 |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:209,725,698...209,745,141
Ensembl chr 1:209,725,638...209,745,705
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TPCN2 |
two pore segment channel 2 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:4,069,267...4,105,065
Ensembl chr 2:4,069,280...4,105,042
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IHH |
Indian hedgehog signaling molecule |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121
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ADAMTSL4 |
ADAMTS like 4 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 4:98,577,813...98,589,255
Ensembl chr 4:98,577,823...98,589,180
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CD63 |
CD63 molecule |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 5:21,172,275...21,176,225
Ensembl chr 5:21,172,283...21,176,232
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CD63 |
CD63 molecule |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 5:21,172,275...21,176,225
Ensembl chr 5:21,172,283...21,176,232
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BAX |
BCL2 associated X, apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,147
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G |
BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879
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G |
ADAMTS20 |
ADAM metallopeptidase with thrombospondin type 1 motif 20 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 5:74,502,098...74,672,703
Ensembl chr 5:74,503,113...74,672,703
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G |
ADAMTS9 |
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr13:46,033,753...46,209,238
Ensembl chr13:46,034,833...46,207,006
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G |
BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879
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KITLG |
KIT ligand |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 5:94,016,992...94,110,219
Ensembl chr 5:94,017,387...94,110,214
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ZEB2 |
zinc finger E-box binding homeobox 2 |
involved_in |
ISO |
(PMID:24769727) |
BHF-UCL |
PMID:24769727 |
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NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
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G |
BLOC1S5 |
biogenesis of lysosomal organelles complex 1 subunit 5 |
involved_in |
ISS IEA |
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UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:5,324,467...5,363,346
Ensembl chr 7:5,321,655...5,363,538
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BLOC1S6 |
biogenesis of lysosomal organelles complex 1 subunit 6 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858
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ADAMTS20 |
ADAM metallopeptidase with thrombospondin type 1 motif 20 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 5:74,502,098...74,672,703
Ensembl chr 5:74,503,113...74,672,703
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ADAMTS9 |
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr13:46,033,753...46,209,238
Ensembl chr13:46,034,833...46,207,006
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BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879
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G |
BCL2L11 |
BCL2 like 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 3:45,156,791...45,202,996
Ensembl chr 3:45,160,155...45,201,186
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EDN3 |
endothelin 3 |
acts_upstream_of_or_within |
ISO |
(PMID:14138974) |
MGI |
PMID:14138974 |
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NCBI chr17:59,418,667...59,448,382
Ensembl chr17:59,425,495...59,448,362
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G |
VPS33A |
VPS33A core subunit of CORVET and HOPS complexes |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr14:30,469,003...30,496,626
Ensembl chr14:30,469,070...30,495,470
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SPNS2 |
SPNS lysolipid transporter 2, sphingosine-1-phosphate |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr12:50,454,051...50,491,172
Ensembl chr12:50,454,063...50,491,164
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GNA11 |
G protein subunit alpha 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:75,439,405...75,456,855
Ensembl chr 2:75,437,201...75,457,092
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G |
GNAQ |
G protein subunit alpha q |
acts_upstream_of_or_within |
ISO |
(PMID:15322542) |
MGI |
PMID:15322542 |
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NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,265...230,907,674
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G |
GRK3 |
G protein-coupled receptor kinase 3 |
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ISO |
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RGD |
PMID:17573483 |
RGD:5685371 |
NCBI chr14:43,305,255...43,445,626
Ensembl chr14:43,224,930...43,442,965
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Term paths to the root
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