ONTOLOGY REPORT - ANNOTATIONS |
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Term: | developmental pigmentation |
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Accession: | GO:0048066
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browse the term
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Definition: | The developmental process that results in the deposition of coloring matter in an organism, tissue or cell. |
Synonyms: | related_synonym: | pigmentation during development |
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BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
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BCL2L11 |
BCL2 like 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:111,120,914...111,168,445
Ensembl chr 2:111,119,378...111,168,444
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BLOC1S3 |
biogenesis of lysosomal organelles complex 1 subunit 3 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr19:45,178,784...45,217,083
Ensembl chr19:45,178,784...45,216,933
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BLOC1S5 |
biogenesis of lysosomal organelles complex 1 subunit 5 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 6:8,013,567...8,064,414
Ensembl chr 6:8,013,567...8,064,396
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DCT |
dopachrome tautomerase |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:94,436,811...94,549,406
Ensembl chr13:94,436,811...94,479,682
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EDNRA |
endothelin receptor type A |
involved_in |
IBA |
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GO_Central |
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GO_REF:0000033 |
NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
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EDNRB |
endothelin receptor type B |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:77,895,487...77,975,527
Ensembl chr13:77,895,481...77,975,529
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GNA11 |
G protein subunit alpha 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
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GNAQ |
G protein subunit alpha q |
acts_upstream_of_or_within |
ISO |
(PMID:15322542) |
MGI |
PMID:15322542 |
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NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
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HPS5 |
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 |
involved_in |
IBA |
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GO_Central |
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GO_REF:0000033 |
NCBI chr11:18,278,670...18,322,174
Ensembl chr11:18,278,668...18,322,198
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KIT |
KIT proto-oncogene, receptor tyrosine kinase |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,267...54,740,783
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MREG |
melanoregulin |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:215,939,308...216,034,096
Ensembl chr 2:215,942,584...216,034,096
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MYO5A |
myosin VA |
acts_upstream_of_or_within |
ISO |
(PMID:15550542) |
MGI |
PMID:15550542 |
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NCBI chr15:52,307,283...52,529,050
Ensembl chr15:52,307,281...52,529,132
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OCA2 |
OCA2 melanosomal transmembrane protein |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr15:27,719,008...28,099,315
Ensembl chr15:27,754,875...28,099,315
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PAX3 |
paired box 3 |
acts_upstream_of_or_within |
ISO |
(PMID:15322542) |
MGI |
PMID:15322542 |
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NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,887...222,298,998
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SLC45A2 |
solute carrier family 45 member 2 |
involved_in acts_upstream_of_or_within |
ISS IEA |
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UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:33,944,623...33,984,693
Ensembl chr 5:33,944,623...33,984,693
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ZEB2 |
zinc finger E-box binding homeobox 2 |
involved_in |
ISS IEA |
(PMID:24769727) |
BHF-UCL Ensembl |
PMID:24769727 |
GO_REF:0000107 |
NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057
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ZIC2 |
Zic family member 2 |
acts_upstream_of_or_within |
ISO |
(PMID:10932191) |
MGI |
PMID:10932191 |
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NCBI chr13:99,981,784...99,986,765
Ensembl chr13:99,981,784...99,986,765
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ANKRD27 |
ankyrin repeat domain 27 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr19:32,597,006...32,675,180
Ensembl chr19:32,597,006...32,676,597
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AP1G1 |
adaptor related protein complex 1 subunit gamma 1 |
involved_in |
IMP |
(PMID:22511774) |
ParkinsonsUK-UCL |
PMID:22511774 |
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NCBI chr16:71,729,000...71,808,834
Ensembl chr16:71,729,000...71,809,201
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AP1M1 |
adaptor related protein complex 1 subunit mu 1 |
involved_in |
IMP |
(PMID:19841138) |
UniProt |
PMID:19841138 |
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NCBI chr19:16,197,911...16,245,906
Ensembl chr19:16,197,854...16,245,906
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AP3D1 |
adaptor related protein complex 3 subunit delta 1 |
involved_in |
IMP |
(PMID:22511774) |
ParkinsonsUK-UCL |
PMID:22511774 |
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NCBI chr19:2,100,988...2,164,616
Ensembl chr19:2,100,988...2,164,468
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BLOC1S3 |
biogenesis of lysosomal organelles complex 1 subunit 3 |
involved_in |
IDA |
(PMID:17182842) |
UniProt |
PMID:17182842 |
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NCBI chr19:45,178,784...45,217,083
Ensembl chr19:45,178,784...45,216,933
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BLOC1S5 |
biogenesis of lysosomal organelles complex 1 subunit 5 |
involved_in |
IDA |
(PMID:17182842) |
UniProt |
PMID:17182842 |
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NCBI chr 6:8,013,567...8,064,414
Ensembl chr 6:8,013,567...8,064,396
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BLOC1S6 |
biogenesis of lysosomal organelles complex 1 subunit 6 |
involved_in |
IDA |
(PMID:17182842) |
UniProt |
PMID:17182842 |
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NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945
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CD63 |
CD63 molecule |
involved_in |
IMP |
(PMID:21962903) |
UniProt |
PMID:21962903 |
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NCBI chr12:55,723,535...55,730,041
Ensembl chr12:55,725,323...55,729,707
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RAB32 |
RAB32, member RAS oncogene family |
involved_in |
IMP |
(PMID:22511774) |
ParkinsonsUK-UCL |
PMID:22511774 |
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NCBI chr 6:146,543,833...146,554,953
Ensembl chr 6:146,543,833...146,554,953
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RAB38 |
RAB38, member RAS oncogene family |
involved_in |
IMP |
(PMID:22511774) |
ParkinsonsUK-UCL |
PMID:22511774 |
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NCBI chr11:87,803,715...88,175,443
Ensembl chr11:88,113,251...88,175,443
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SOD2 |
superoxide dismutase 2 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 6:159,669,069...159,762,281
Ensembl chr 6:159,669,069...159,762,529
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GPR143 |
G protein-coupled receptor 143 |
involved_in |
TAS |
(PMID:7647783) |
PINC |
PMID:7647783 |
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NCBI chr X:9,725,346...9,778,602
Ensembl chr X:9,725,346...9,786,297
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TYR |
tyrosinase |
involved_in |
TAS |
(PMID:7704033) |
PINC |
PMID:7704033 |
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NCBI chr11:89,177,875...89,295,759
Ensembl chr11:89,177,875...89,295,759
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ATP6AP2 |
ATPase H+ transporting accessory protein 2 |
involved_in |
IMP |
(PMID:20093472) |
UniProt |
PMID:20093472 |
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NCBI chr X:40,580,970...40,606,848
Ensembl chr X:40,579,372...40,606,848
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HPS1 |
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:21052544) |
MGI |
PMID:21052544 |
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NCBI chr10:98,413,948...98,446,935
Ensembl chr10:98,410,939...98,446,963
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VHL |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
ISO |
(PMID:22627278) |
MGI |
PMID:22627278 |
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NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,676
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ADAMTS20 |
ADAM metallopeptidase with thrombospondin type 1 motif 20 |
acts_upstream_of |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr12:43,352,763...43,552,203
Ensembl chr12:43,353,866...43,552,203
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ADAMTS9 |
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
acts_upstream_of |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000
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BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of acts_upstream_of_or_within |
ISO IEA |
(PMID:16427619) |
MGI Ensembl |
PMID:16427619 |
GO_REF:0000107 |
NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
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BLOC1S6 |
biogenesis of lysosomal organelles complex 1 subunit 6 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945
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CITED1 |
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 |
involved_in |
IEA IBA IEP |
(PMID:8901575) |
Ensembl GO_Central UniProt |
PMID:8901575 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr X:72,301,646...72,307,157
Ensembl chr X:72,301,638...72,307,187
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EDN3 |
endothelin 3 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr20:59,300,611...59,325,992
Ensembl chr20:59,300,443...59,325,992
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EDNRB |
endothelin receptor type B |
involved_in acts_upstream_of_or_within |
ISO IEA |
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RGD Ensembl |
PMID:11709437 |
GO_REF:0000107 RGD:628459 |
NCBI chr13:77,895,487...77,975,527
Ensembl chr13:77,895,481...77,975,529
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ENPP1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
involved_in |
IMP |
(PMID:28964717) |
UniProt |
PMID:28964717 |
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NCBI chr 6:131,808,020...131,895,155
Ensembl chr 6:131,808,016...131,895,155
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GLI3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
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HPS1 |
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11836498) |
MGI |
PMID:11836498 |
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NCBI chr10:98,413,948...98,446,935
Ensembl chr10:98,410,939...98,446,963
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HPS4 |
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr22:26,443,109...26,483,863
Ensembl chr22:26,443,107...26,483,931
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KIT |
KIT proto-oncogene, receptor tyrosine kinase |
involved_in |
TAS IEA ISS |
(PMID:21057534) |
UniProt Ensembl |
PMID:21057534 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,267...54,740,783
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LRMDA |
leucine rich melanocyte differentiation associated |
involved_in |
IMP IBA |
(PMID:23395477) |
UniProt GO_Central |
PMID:23395477 |
GO_REF:0000033 |
NCBI chr10:75,431,624...76,560,168
Ensembl chr10:75,431,624...76,560,168
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MEF2C |
myocyte enhancer factor 2C |
involved_in |
ISS |
(PMID:21610032) |
UniProt |
PMID:21610032 |
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NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
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MITF |
melanocyte inducing transcription factor |
involved_in acts_upstream_of_or_within |
NAS IEA IBA |
(PMID:9647758) |
UniProt Ensembl GO_Central |
PMID:9647758 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:69,739,464...69,968,332
Ensembl chr 3:69,739,456...69,968,336
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MLPH |
melanophilin |
acts_upstream_of_or_within |
ISO |
(PMID:11504925), (PMID:2379821) |
MGI |
PMID:2379821 PMID:11504925 |
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NCBI chr 2:237,486,410...237,555,322
Ensembl chr 2:237,485,428...237,555,322
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MREG |
melanoregulin |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:215,939,308...216,034,096
Ensembl chr 2:215,942,584...216,034,096
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MYO5A |
myosin VA |
acts_upstream_of_or_within |
ISO |
(PMID:1996138), (PMID:2379821), (PMID:7828830) |
MGI |
PMID:1996138 PMID:2379821 PMID:7828830 |
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NCBI chr15:52,307,283...52,529,050
Ensembl chr15:52,307,281...52,529,132
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OCA2 |
OCA2 melanosomal transmembrane protein |
acts_upstream_of_or_within involved_in |
IEA IBA |
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Ensembl GO_Central |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr15:27,719,008...28,099,315
Ensembl chr15:27,754,875...28,099,315
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OR51E2 |
olfactory receptor family 51 subfamily E member 2 |
involved_in |
IMP |
(PMID:27226631) |
UniProt |
PMID:27226631 |
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NCBI chr11:4,680,171...4,697,853
Ensembl chr11:4,680,171...4,697,854
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RAB27A |
RAB27A, member RAS oncogene family |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr15:55,202,966...55,289,813
Ensembl chr15:55,202,966...55,319,113
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SOX10 |
SRY-box transcription factor 10 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr22:37,972,312...37,984,555
Ensembl chr22:37,970,686...37,987,422
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TYRP1 |
tyrosinase related protein 1 |
involved_in acts_upstream_of_or_within |
IBA IEA |
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GO_Central Ensembl |
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GO_REF:0000033 GO_REF:0000107 |
NCBI chr 9:12,693,385...12,710,285
Ensembl chr 9:12,685,439...12,710,285
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USP13 |
ubiquitin specific peptidase 13 |
involved_in |
TAS |
(PMID:21811243) |
UniProt |
PMID:21811243 |
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NCBI chr 3:179,653,040...179,789,401
Ensembl chr 3:179,653,032...179,804,366
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TPCN2 |
two pore segment channel 2 |
involved_in |
IDA IEA |
(PMID:27140606) |
UniProt Ensembl |
PMID:27140606 |
GO_REF:0000107 |
NCBI chr11:69,048,932...69,090,597
Ensembl chr11:69,048,932...69,136,316
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IHH |
Indian hedgehog signaling molecule |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
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ADAMTSL4 |
ADAMTS like 4 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:150,549,408...150,560,937
Ensembl chr 1:150,549,369...150,560,937
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CD63 |
CD63 molecule |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr12:55,723,535...55,730,041
Ensembl chr12:55,725,323...55,729,707
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CD63 |
CD63 molecule |
involved_in |
IMP |
(PMID:21962903) |
UniProt |
PMID:21962903 |
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NCBI chr12:55,723,535...55,730,041
Ensembl chr12:55,725,323...55,729,707
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BAX |
BCL2 associated X, apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798
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BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
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G |
HPS4 |
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 |
involved_in |
TAS |
(PMID:11836498) |
UniProt |
PMID:11836498 |
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NCBI chr22:26,443,109...26,483,863
Ensembl chr22:26,443,107...26,483,931
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ADAMTS20 |
ADAM metallopeptidase with thrombospondin type 1 motif 20 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr12:43,352,763...43,552,203
Ensembl chr12:43,353,866...43,552,203
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ADAMTS9 |
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000
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BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
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KITLG |
KIT ligand |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr12:88,492,793...88,580,471
Ensembl chr12:88,492,793...88,580,851
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ZEB2 |
zinc finger E-box binding homeobox 2 |
involved_in |
ISS IEA |
(PMID:24769727) |
BHF-UCL Ensembl |
PMID:24769727 |
GO_REF:0000107 |
NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057
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BLOC1S5 |
biogenesis of lysosomal organelles complex 1 subunit 5 |
involved_in |
IDA |
(PMID:17182842) |
UniProt |
PMID:17182842 |
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NCBI chr 6:8,013,567...8,064,414
Ensembl chr 6:8,013,567...8,064,396
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G |
BLOC1S6 |
biogenesis of lysosomal organelles complex 1 subunit 6 |
involved_in |
IDA |
(PMID:17182842) |
UniProt |
PMID:17182842 |
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NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945
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G |
ADAMTS20 |
ADAM metallopeptidase with thrombospondin type 1 motif 20 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr12:43,352,763...43,552,203
Ensembl chr12:43,353,866...43,552,203
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G |
ADAMTS9 |
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000
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G |
BCL2 |
BCL2 apoptosis regulator |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
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G |
BCL2L11 |
BCL2 like 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:111,120,914...111,168,445
Ensembl chr 2:111,119,378...111,168,444
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G |
EDN3 |
endothelin 3 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr20:59,300,611...59,325,992
Ensembl chr20:59,300,443...59,325,992
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G |
VPS33A |
VPS33A core subunit of CORVET and HOPS complexes |
involved_in acts_upstream_of_or_within |
ISS IEA |
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UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr12:122,229,564...122,266,494
Ensembl chr12:122,229,564...122,266,502
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G |
SPNS2 |
SPNS lysolipid transporter 2, sphingosine-1-phosphate |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr17:4,498,881...4,539,035
Ensembl chr17:4,498,881...4,539,035
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G |
GNA11 |
G protein subunit alpha 11 |
acts_upstream_of_or_within |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
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G |
GNAQ |
G protein subunit alpha q |
acts_upstream_of_or_within |
ISO |
(PMID:15322542) |
MGI |
PMID:15322542 |
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NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
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G |
GRK3 |
G protein-coupled receptor kinase 3 |
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ISO |
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RGD |
PMID:17573483 |
RGD:5685371 |
NCBI chr22:25,564,675...25,729,294
Ensembl chr22:25,564,675...25,729,294
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Term paths to the root
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