ONTOLOGY REPORT - ANNOTATIONS
Term: antigen processing and presentation of peptide antigen
Accession: GO:0048002
browse the term
Definition: The process in which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.
Synonyms: exact_synonym: antigen presentation, peptide antigen; peptide antigen processing and presentation
G
Ctsl
cathepsin L
involved_in
ISS ISO
GO_REF:0000024 (PMID:12021314), (PMID:9545226)
UniProt RGD
PMID:9545226 PMID:12021314
GO_REF:0000024
NCBI chr17:770,104...776,266
G
Ctss
cathepsin S
involved_in
ISO
(PMID:8612130)
RGD
PMID:8612130
NCBI chr 2:185,775,316...185,803,440
G
RT1-Ba
RT1 class II, locus Ba
acts_upstream_of_or_within
ISO
(PMID:11069069)
RGD
PMID:11069069
NCBI chr20:4,575,134...4,579,727
G
RT1-Bb
RT1 class II, locus Bb
acts_upstream_of_or_within
ISO
(PMID:11069069)
RGD
PMID:11069069
NCBI chr20:4,598,475...4,604,118
G
Slc11a1
solute carrier family 11 member 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857756 (PMID:17620357)
Ensembl RGD
PMID:17620357
GO_REF:0000107
NCBI chr 9:75,957,193...75,968,115
G
B2m
beta-2 microglobulin
involved_in
ISO IEA
UniProtKB:P04439 (PMID:24643698) GO_REF:0000107
RGD Ensembl
PMID:24643698
GO_REF:0000107
NCBI chr 3:129,549,236...129,555,354
G
Ide
insulin degrading enzyme
involved_in
ISO IEA ISS
(PMID:20364150) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20364150
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:244,415,495...244,516,925
G
RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:1402688), (PMID:20364150), (PMID:24643698)
RGD
PMID:1402688 PMID:20364150 PMID:24643698
NCBI chr20:3,261,656...3,265,548
G
Tap1
transporter 1, ATP binding cassette subfamily B member
involved_in
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 (PMID:11133832)
Ensembl GO_Central RGD
PMID:11133832
GO_REF:0000033 GO_REF:0000107
NCBI chr20:4,658,171...4,668,543
G
Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in acts_upstream_of_or_within
ISO IDA
(PMID:1538751), (PMID:8496691) PMID:1758495
RGD
PMID:1538751 PMID:8496691 PMID:1758495
RGD:1299069
NCBI chr20:4,636,347...4,650,387
G
Tapbp
TAP binding protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr20:4,956,937...4,966,191
G
RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:8630735)
RGD
PMID:8630735
NCBI chr20:3,261,656...3,265,548
G
Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:1538753)
Ensembl RGD
PMID:1538753
GO_REF:0000107
NCBI chr20:4,636,347...4,650,387
G
AABR07000147.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
AABR07001348.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
AABR07044308.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
AABR07044383.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
Azgp1
alpha-2-glycoprotein 1, zinc-binding
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:16,930,990...16,939,333
G
ENSRNOG00000064836
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
ENSRNOG00000070971
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
H2-M10.6l
histocompatibility 2, M region locus 10.6 like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,958,270...1,965,247
G
H60al
histocompatibility 60a like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,382,896...1,386,846
G
LOC120093164
retinoic acid early-inducible protein 1-gamma-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,807,226...1,812,755
G
Raet1l
retinoic acid early transcript 1L
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,979,433...1,984,410
G
Raet1ll1
retinoic acid early transcript 1L like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,397,219...1,437,802
G
RT1-A
RT1 class I, locus A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-A-ps
RT1 class I, A, pseudogene
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-CE1
RT1 class I, locus 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,555,779...3,559,487
G
RT1-CE10
RT1 class I, locus CE10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,377,284...3,380,301
G
RT1-CE11
RT1 class I, locus CE11
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,355,393...3,358,520
G
RT1-CE12
RT1 class I, locus CE12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,338,907...3,342,547
G
RT1-CE14
RT1 class I, locus CE14
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,296,654...3,300,795
G
RT1-CE16
RT1 class I, locus CE16
involved_in
ISO IBA
(PMID:22031944) GO_REF:0000033
RGD GO_Central
PMID:22031944
GO_REF:0000033
NCBI chr20:3,261,656...3,265,548
G
RT1-CE3
RT1 class I, locus CE3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,516,647...3,520,938
G
Rt1-ec3
RT1 class I, locus EC3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-M1-2
RT1 class I, locus M1, gene 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,909,506...1,913,423
G
RT1-M1-4
RT1 class I, locus M1, gene 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,891,365...1,893,585
G
RT1-M1-5
RT1 class I, M1, gene 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,858,608...1,860,708
G
RT1-M10-ps1
RT1 class I, locus M10, pseudogene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,986,817...1,988,908
G
RT1-M10-ps5
RT1 class I, locus M10, pseudogene 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-M2
RT1 class Ib, locus M2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:978,918...981,510
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,329,227...1,333,394
G
RT1-M5
RT1 class Ib, locus M5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,546,496...1,548,948
G
RT1-M6-2
RT1 class I, locus M6, gene 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,583,267...1,587,099
G
RT1-N1
RT1 class Ib, locus N1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-N2
RT1 class Ib, locus N2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,641,157...2,645,439
G
RT1-N3
RT1 class Ib, locus N3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,659,132...2,665,536
G
RT1-O1l1
RT1 class Ib, locus O1 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,624,073...2,658,023
G
RT1-S3
RT1 class Ib, locus S3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,670,654...2,675,411
G
RT1-T24-1
RT1 class I, locus T24, gene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,761,495...2,774,871
G
RT1-T24-3
RT1 class I, locus T24, gene 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,718,210...2,730,604
G
RT1-T24-4
RT1 class I, locus T24, gene 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,684,515...2,747,878
G
AABR07000147.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
AABR07001348.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
AABR07044308.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
AABR07044383.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
Azgp1
alpha-2-glycoprotein 1, zinc-binding
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:16,930,990...16,939,333
G
ENSRNOG00000064836
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
ENSRNOG00000070971
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
H2-M10.6l
histocompatibility 2, M region locus 10.6 like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,958,270...1,965,247
G
H60al
histocompatibility 60a like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,382,896...1,386,846
G
LOC120093164
retinoic acid early-inducible protein 1-gamma-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,807,226...1,812,755
G
Raet1l
retinoic acid early transcript 1L
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,979,433...1,984,410
G
Raet1ll1
retinoic acid early transcript 1L like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,397,219...1,437,802
G
RT1-A
RT1 class I, locus A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-A-ps
RT1 class I, A, pseudogene
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:9754572)
RGD
PMID:9754572
NCBI chr20:4,870,939...4,910,183
G
RT1-CE1
RT1 class I, locus 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,555,779...3,559,487
G
RT1-CE10
RT1 class I, locus CE10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,377,284...3,380,301
G
RT1-CE11
RT1 class I, locus CE11
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,355,393...3,358,520
G
RT1-CE12
RT1 class I, locus CE12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,338,907...3,342,547
G
RT1-CE14
RT1 class I, locus CE14
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,296,654...3,300,795
G
RT1-CE16
RT1 class I, locus CE16
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,261,656...3,265,548
G
RT1-CE3
RT1 class I, locus CE3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,516,647...3,520,938
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:28636952)
RGD
PMID:28636952
NCBI chr20:3,403,418...3,479,476
G
Rt1-ec3
RT1 class I, locus EC3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-M1-2
RT1 class I, locus M1, gene 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,909,506...1,913,423
G
RT1-M1-4
RT1 class I, locus M1, gene 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,891,365...1,893,585
G
RT1-M1-5
RT1 class I, M1, gene 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,858,608...1,860,708
G
RT1-M10-ps1
RT1 class I, locus M10, pseudogene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,986,817...1,988,908
G
RT1-M10-ps5
RT1 class I, locus M10, pseudogene 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-M2
RT1 class Ib, locus M2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:978,918...981,510
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:7584149), (PMID:8805247) (PMID:8464890) GO_REF:0000033
RGD GO_Central
PMID:7584149 PMID:8464890 PMID:8805247
GO_REF:0000033
NCBI chr20:1,329,227...1,333,394
G
RT1-M5
RT1 class Ib, locus M5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,546,496...1,548,948
G
RT1-M6-2
RT1 class I, locus M6, gene 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,583,267...1,587,099
G
RT1-N1
RT1 class Ib, locus N1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-N2
RT1 class Ib, locus N2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,641,157...2,645,439
G
RT1-N3
RT1 class Ib, locus N3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,659,132...2,665,536
G
RT1-O1l1
RT1 class Ib, locus O1 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,624,073...2,658,023
G
RT1-S3
RT1 class Ib, locus S3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,670,654...2,675,411
G
RT1-T24-1
RT1 class I, locus T24, gene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,761,495...2,774,871
G
RT1-T24-3
RT1 class I, locus T24, gene 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,718,210...2,730,604
G
RT1-T24-4
RT1 class I, locus T24, gene 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,684,515...2,747,878
G
RT1-A2
RT1 class Ia, locus A2
acts_upstream_of_or_within
ISO
(PMID:1538753)
RGD
PMID:1538753
NCBI chr20:4,870,939...4,910,183
G
Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:1538751) (PMID:1538753) GO_REF:0000107
RGD Ensembl
PMID:1538751 PMID:1538753
GO_REF:0000107
NCBI chr20:4,636,347...4,650,387
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,513,464...4,518,457
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,548,664...4,558,237
G
Mpeg1
macrophage expressed 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:35471730)
UniProt RGD
PMID:35471730
GO_REF:0000024
NCBI chr 1:209,452,176...209,456,692
G
Clec4a
C-type lectin domain family 4, member A
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 4:156,340,439...156,434,212
G
Clec4a3
C-type lectin domain family 4, member A3
involved_in
ISO
(PMID:20530286)
RGD
PMID:20530286
NCBI chr 4:156,214,030...156,224,818
G
Fcer1g
Fc epsilon receptor Ig
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2384004 (PMID:11911824)
GO_Central RGD
PMID:11911824
GO_REF:0000033
NCBI chr13:86,181,908...86,186,766
G
Fcgr1a
Fc gamma receptor 1A
acts_upstream_of_or_within
ISO
MGI:2664927 (PMID:11911824)
RGD
PMID:11911824
NCBI chr 2:186,539,941...186,548,941
G
Fcgr2a
Fc gamma receptor 2A
acts_upstream_of_or_within
ISO
MGI:1861924 (PMID:11911824)
RGD
PMID:11911824
NCBI chr13:85,813,516...85,830,269
G
Ifi30
IFI30, lysosomal thiol reductase
involved_in
ISS ISO
GO_REF:0000024 (PMID:20538950)
UniProt RGD
PMID:20538950
GO_REF:0000024
NCBI chr16:18,675,590...18,679,655
G
Mfsd6
major facilitator superfamily domain containing 6
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17010536)
GO_Central RGD
PMID:17010536
GO_REF:0000033
NCBI chr 9:56,265,152...56,350,449
G
Mpeg1
macrophage expressed 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:37347855)
UniProt RGD
PMID:37347855
GO_REF:0000024
NCBI chr 1:209,452,176...209,456,692
G
RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:12138174), (PMID:7504010)
RGD
PMID:7504010 PMID:12138174
NCBI chr20:3,261,656...3,265,548
G
Tapbp
TAP binding protein
involved_in acts_upstream_of_or_within
ISO
(PMID:9716645)
RGD
PMID:9716645
NCBI chr20:4,956,937...4,966,191
G
RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:20195504), (PMID:30087334)
RGD
PMID:20195504 PMID:30087334
NCBI chr20:4,870,939...4,910,183
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:23851683)
RGD
PMID:23851683
NCBI chr20:3,403,418...3,479,476
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
acts_upstream_of_or_within
ISO
(PMID:16461341)
RGD
PMID:16461341
NCBI chr20:1,329,227...1,333,394
G
B2m
beta-2 microglobulin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:129,549,236...129,555,354
G
Cd74
CD74 molecule
acts_upstream_of_or_within
ISO
MGI:1927205 (PMID:7679955), (PMID:8598040)
RGD
PMID:7679955 PMID:8598040
NCBI chr18:54,256,757...54,266,003
G
Ctse
cathepsin E
involved_in
ISO IDA IBA
(PMID:8765029) PMID:8491674 GO_REF:0000033 (PMID:11719510)
RGD GO_Central
PMID:8765029 PMID:11719510 PMID:8491674
GO_REF:0000033, RGD:8553254
NCBI chr13:43,091,954...43,114,509
G
Ctss
cathepsin S
involved_in
ISO IEA ISS
(PMID:30612035) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:30612035
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:185,775,316...185,803,440
G
ENSRNOG00000070540
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
Fcer1g
Fc epsilon receptor Ig
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1857165 (PMID:14643301)
GO_Central RGD
PMID:14643301
GO_REF:0000033
NCBI chr13:86,181,908...86,186,766
G
Fcgr2b
Fc gamma receptor 2B
acts_upstream_of_or_within
ISO
MGI:1857166 (PMID:14643301)
RGD
PMID:14643301
NCBI chr13:85,725,897...85,740,517
G
Ifi30
IFI30, lysosomal thiol reductase
acts_upstream_of_or_within
ISO
MGI:2178559 (PMID:11701933)
RGD
PMID:11701933
NCBI chr16:18,675,590...18,679,655
G
Ighe
immunoglobulin heavy constant epsilon
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
Lgmn
legumain
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:9872320)
UniProt Ensembl RGD
PMID:9872320
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:121,544,048...121,582,495
G
Pikfyve
phosphoinositide kinase, FYVE-type zinc finger containing
involved_in
ISO
(PMID:30612035)
RGD
PMID:30612035
NCBI chr 9:74,057,488...74,151,610
G
RT1-B
RT1 class II, locus B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-Ba
RT1 class II, locus Ba
involved_in acts_upstream_of_or_within
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 (PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)
Ensembl GO_Central RGD
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 PMID:11027433 PMID:11069069 PMID:11714799 More...
GO_REF:0000033 GO_REF:0000107
NCBI chr20:4,575,134...4,579,727
G
RT1-Bb
RT1 class II, locus Bb
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:32341563) GO_REF:0000033 (PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)
RGD GO_Central
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 PMID:11027433 PMID:11069069 PMID:11714799 PMID:32341563 More...
GO_REF:0000033
NCBI chr20:4,598,475...4,604,118
G
RT1-Da
RT1 class II, locus Da
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:15265931) GO_REF:0000033 (PMID:11027433), (PMID:11714799)
RGD GO_Central
PMID:11027433 PMID:11714799 PMID:15265931
GO_REF:0000033
NCBI chr20:4,513,464...4,518,457
G
RT1-Db1
RT1 class II, locus Db1
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:15265931), (PMID:32341563) GO_REF:0000033 (PMID:11027433), (PMID:11714799)
RGD GO_Central
PMID:11027433 PMID:11714799 PMID:15265931 PMID:32341563
GO_REF:0000033
NCBI chr20:4,548,664...4,558,237
G
RT1-Db2
RT1 class II, locus Db2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,520,723...4,539,724
G
RT1-DMa
RT1 class II, locus DMa
acts_upstream_of_or_within involved_in
ISO IBA
MGI:1861933|MGI:2384509|MGI:2652160 (PMID:11027433), (PMID:11714799), (PMID:8598040), (PMID:8598041) GO_REF:0000033
RGD GO_Central
PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799
GO_REF:0000033
NCBI chr20:4,707,028...4,710,432
G
RT1-DMb
RT1 class II, locus DMb
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:8139689) GO_REF:0000033 (PMID:11027433)
RGD GO_Central
PMID:8139689 PMID:11027433
GO_REF:0000033
NCBI chr20:4,693,102...4,700,340
G
RT1-DOa
RT1 class II, locus DOa
acts_upstream_of_or_within
ISO
MGI:2675254 (PMID:9492004)
RGD
PMID:9492004
NCBI chr20:4,753,587...4,756,590
G
RT1-DOb
RT1 class II, locus DOb
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,621,336...4,627,537
G
RT1-Ha
RT1 class II, locus Ha
involved_in
ISO IBA
(PMID:20356827) GO_REF:0000033
RGD GO_Central
PMID:20356827
GO_REF:0000033
NCBI chr20:4,760,631...4,770,662
G
RT1-Hb-ps1
RT1 class II, locus Hb, pseudogene 1
involved_in
ISO IBA
(PMID:20356827), (PMID:32341563) GO_REF:0000033
RGD GO_Central
PMID:20356827 PMID:32341563
GO_REF:0000033
NCBI chr20:4,775,598...4,779,590
G
Traf6
TNF receptor associated factor 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2678775 (PMID:14499111)
Ensembl RGD
PMID:14499111
GO_REF:0000107
NCBI chr 3:87,963,517...87,988,316
G
Unc93b1
unc-93 homolog B1, TLR signaling regulator
acts_upstream_of_or_within
ISO
MGI:3619211 (PMID:16415873)
RGD
PMID:16415873
NCBI chr 1:201,167,388...201,178,343
G
B2m
beta-2 microglobulin
acts_upstream_of_or_within
ISO
(PMID:16299293)
RGD
PMID:16299293
NCBI chr 3:129,549,236...129,555,354
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
acts_upstream_of_or_within
ISO
(PMID:16299293)
RGD
PMID:16299293
NCBI chr20:1,329,227...1,333,394
G
Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16299293)
Ensembl RGD
PMID:16299293
GO_REF:0000107
NCBI chr20:4,636,347...4,650,387
G
AABR07044397.1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
G
Abcb9
ATP binding cassette subfamily B member 9
NOT|involved_in
ISO
(PMID:17977821)
RGD
PMID:17977821
NCBI chr12:32,499,213...32,531,932
G
Mr1
major histocompatibility complex, class I-related
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr13:69,850,420...69,868,302
G
RT1-CE2
RT1 class I, locus CE2
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:3,538,452...3,541,841
G
RT1-O1
RT1 class Ib, locus O1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:2,655,116...2,657,520
G
RT1-S2
RT1 class Ib, locus S2
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:2,650,233...2,651,654
G
Marchf1
membrane associated ring-CH-type finger 1
involved_in
ISO IBA
(PMID:18389477) (PMID:17255932), (PMID:19917682) GO_REF:0000033
RGD GO_Central
PMID:17255932 PMID:18389477 PMID:19917682
GO_REF:0000033
NCBI chr16:23,255,551...24,114,290
G
Marchf8
membrane associated ring-CH-type finger 8
involved_in
IBA ISO
GO_REF:0000033 (PMID:16785530)
GO_Central RGD
PMID:16785530
GO_REF:0000033
NCBI chr 4:149,415,642...149,530,771
G
Hfe
homeostatic iron regulator
involved_in
ISO
UniProtKB:P04439 (PMID:24643698)
RGD
PMID:24643698
NCBI chr17:41,841,302...41,849,359
G
Tapbpl
TAP binding protein-like
involved_in
ISO
(PMID:23401559)
RGD
PMID:23401559
NCBI chr 4:158,021,454...158,028,905
G
RT1-DOa
RT1 class II, locus DOa
involved_in
ISO
(PMID:22733780)
RGD
PMID:22733780
NCBI chr20:4,753,587...4,756,590
G
RT1-DOb
RT1 class II, locus DOb
involved_in
ISO
(PMID:22733780)
RGD
PMID:22733780
NCBI chr20:4,621,336...4,627,537
G
B2m
beta-2 microglobulin
involved_in
IEA ISO
GO_REF:0000107 (PMID:36104323)
Ensembl RGD
PMID:36104323
GO_REF:0000107
NCBI chr 3:129,549,236...129,555,354
G
Calr
calreticulin
involved_in
ISO
(PMID:35948544) (PMID:11825569)
RGD
PMID:11825569 PMID:35948544
NCBI chr19:40,213,367...40,218,262
G
Pdia3
protein disulfide isomerase family A, member 3
involved_in
ISO IEA
(PMID:17603487) GO_REF:0000107
RGD Ensembl
PMID:17603487
GO_REF:0000107
NCBI chr 3:128,841,781...128,865,733
G
RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:36104323)
RGD
PMID:36104323
NCBI chr20:3,261,656...3,265,548
G
Tapbp
TAP binding protein
involved_in
ISO IBA
(PMID:10636848), (PMID:17603487) GO_REF:0000033
RGD GO_Central
PMID:10636848 PMID:17603487
GO_REF:0000033
NCBI chr20:4,956,937...4,966,191
G
Tapbpl
TAP binding protein-like
involved_in
ISO
(PMID:26869717)
RGD
PMID:26869717
NCBI chr 4:158,021,454...158,028,905
G
B2m
beta-2 microglobulin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:129,549,236...129,555,354
G
ENSRNOG00000070540
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
Ighe
immunoglobulin heavy constant epsilon
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-B
RT1 class II, locus B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-Ba
RT1 class II, locus Ba
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,575,134...4,579,727
G
RT1-Bb
RT1 class II, locus Bb
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,598,475...4,604,118
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781) GO_REF:0000033
RGD GO_Central
PMID:1448172 PMID:7606781 PMID:22733780
GO_REF:0000033
NCBI chr20:4,513,464...4,518,457
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781) GO_REF:0000033
RGD GO_Central
PMID:1448172 PMID:7606781 PMID:22733780
GO_REF:0000033
NCBI chr20:4,548,664...4,558,237
G
RT1-Db2
RT1 class II, locus Db2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,520,723...4,539,724
G
RT1-DMa
RT1 class II, locus DMa
involved_in
ISO IBA
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) GO_REF:0000033
RGD GO_Central
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142
GO_REF:0000033
NCBI chr20:4,707,028...4,710,432
G
RT1-DMb
RT1 class II, locus DMb
involved_in
ISO IBA
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) GO_REF:0000033
RGD GO_Central
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142
GO_REF:0000033
NCBI chr20:4,693,102...4,700,340
G
RT1-DOb
RT1 class II, locus DOb
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,621,336...4,627,537
G
RT1-Ha
RT1 class II, locus Ha
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,760,631...4,770,662
G
RT1-Hb-ps1
RT1 class II, locus Hb, pseudogene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,775,598...4,779,590
G
Tapbp
TAP binding protein
involved_in
ISO
(PMID:12594855)
RGD
PMID:12594855
NCBI chr20:4,956,937...4,966,191
G
Tap1
transporter 1, ATP binding cassette subfamily B member
TAS
RGD
PMID:14622282
RGD:1300480
NCBI chr20:4,658,171...4,668,543
G
Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in
TAS IEA ISO
GO_REF:0000107 (PMID:1538751), (PMID:8496691)
Ensembl RGD
PMID:1538751 PMID:8496691 PMID:14622282
GO_REF:0000107, RGD:1300480
NCBI chr20:4,636,347...4,650,387
G
Tap2
transporter 2, ATP binding cassette subfamily B member
IMP
RGD
PMID:1758495
RGD:1299069
NCBI chr20:4,636,347...4,650,387
G
Pycard
PYD and CARD domain containing
involved_in
ISO
(PMID:21892172)
RGD
PMID:21892172
NCBI chr 1:192,032,124...192,033,419
G
Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(PMID:11602640)
RGD
PMID:11602640
NCBI chr 9:12,647,605...12,654,190
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all