ONTOLOGY REPORT - ANNOTATIONS
Term: alpha-beta T cell differentiation
Accession: GO:0046632
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Definition: The process in which a precursor cell type acquires the specialized features of an alpha-beta T cell. An alpha-beta T cell is a T cell that expresses an alpha-beta T cell receptor complex.
Comment: Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms: exact_synonym: alpha-beta T lymphocyte differentiation
related_synonym: alpha-beta T cell development
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:87860 (PMID:18025176)
RGD
PMID:18025176
NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065
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Abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:87859 (PMID:18025176)
RGD
PMID:18025176
NCBI chr13:71,223,902...71,319,770
Ensembl chr13:68,673,722...68,839,742
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Ada
adenosine deaminase
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1857117 (PMID:11067867), (PMID:12163459), (PMID:16670300)
Ensembl RGD
PMID:11067867 PMID:12163459 PMID:16670300
GO_REF:0000107
NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
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Anxa1
annexin A1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20139728)
Ensembl RGD
PMID:20139728
GO_REF:0000107
NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343
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Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within
ISO
MGI:2663971 (PMID:12717433)
RGD
PMID:12717433
NCBI chr 6:132,598,968...132,692,123
Ensembl chr 6:126,834,531...126,928,224
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Blm
BLM RecQ like helicase
acts_upstream_of_or_within
ISO
MGI:3053044|MGI:3663359 (PMID:17210642)
RGD
PMID:17210642
NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312
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Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:3711006 (PMID:23334952)
RGD
PMID:23334952
NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276 (PMID:15855276)
RGD
PMID:15855276
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
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Lef1
lymphoid enhancer binding factor 1
acts_upstream_of_or_within
ISO
MGI:98507 (PMID:9462507)
RGD
PMID:9462507
NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794
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Prr7
proline rich 7 (synaptic)
involved_in
ISO
MGI:4399196 (PMID:27657535)
RGD
PMID:27657535
NCBI chr17:9,170,405...9,178,814
Ensembl chr17:9,165,269...9,172,536
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Ptcra
pre T-cell antigen receptor alpha
involved_in
ISS ISO
GO_REF:0000024 (PMID:38422122)
UniProt RGD
PMID:38422122
GO_REF:0000024
NCBI chr 9:14,218,907...14,229,141
Ensembl chr 9:14,218,802...14,229,235
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Rorc
RAR-related orphan receptor C
acts_upstream_of_or_within
ISO
MGI:3026635 (PMID:15247480)
RGD
PMID:15247480
NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907
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Rpl22
ribosomal protein L22
acts_upstream_of_or_within
ISO
MGI:3804429 (PMID:17555992)
RGD
PMID:17555992
NCBI chr 5:168,114,432...168,126,114
Ensembl chr 5:162,833,740...162,843,368 Ensembl chr 7:162,833,740...162,843,368 Ensembl chr 4:162,833,740...162,843,368
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:10981962)
Ensembl RGD
PMID:10981962
GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Tcf7
transcription factor 7
acts_upstream_of_or_within
ISO
MGI:96770 (PMID:9462507)
RGD
PMID:9462507
NCBI chr10:36,924,363...36,954,279
Ensembl chr10:36,423,445...36,453,535
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Zap70
zeta chain of T cell receptor associated protein kinase 70
acts_upstream_of
ISO
MGI:2677447|MGI:3526403|MGI:99515 (PMID:7630421), (PMID:9208839), (PMID:9275205)
RGD
PMID:7630421 PMID:9208839 PMID:9275205
NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700
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Rhoa
ras homolog family member A
involved_in
ISO
(PMID:25398325)
RGD
PMID:25398325
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
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Rhoa
ras homolog family member A
involved_in
ISO
(PMID:25398325)
RGD
PMID:25398325
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
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Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:99613 (PMID:9275205)
Ensembl RGD
PMID:9275205
GO_REF:0000107
NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
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Zap70
zeta chain of T cell receptor associated protein kinase 70
acts_upstream_of_or_within
ISO
MGI:99515 (PMID:9275205)
RGD
PMID:9275205
NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700
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Armc5
armadillo repeat containing 5
acts_upstream_of_or_within
ISO
MGI:6098706 (PMID:28169274)
RGD
PMID:28169274
NCBI chr 1:192,250,580...192,257,347
Ensembl chr 1:182,820,141...182,826,907
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Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:3711006 (PMID:23334952)
RGD
PMID:23334952
NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463
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Cd83
CD83 molecule
acts_upstream_of
ISO
MGI:3055293 (PMID:15322158)
RGD
PMID:15322158
NCBI chr17:21,093,281...21,113,223
Ensembl chr17:20,887,309...20,907,083
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Foxp3
forkhead box P3
acts_upstream_of
ISO
(PMID:17028180)
RGD
PMID:17028180
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
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Gimap1
GTPase, IMAP family member 1
acts_upstream_of_or_within
ISO
MGI:2449947|MGI:4459837 (PMID:20194894)
RGD
PMID:20194894
NCBI chr 4:77,687,581...77,691,468
Ensembl chr 4:77,682,171...77,691,866
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Nkx2-3
NK2 homeobox 3
acts_upstream_of_or_within
ISO
MGI:2448069 (PMID:10926756)
RGD
PMID:10926756
NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
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Pax1
paired box 1
acts_upstream_of_or_within
ISO
MGI:3603176 (PMID:16093716)
RGD
PMID:16093716
NCBI chr 3:155,244,961...155,254,836
Ensembl chr 3:134,789,182...134,801,636
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Rsad2
radical S-adenosyl methionine domain containing 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:19047684) GO_REF:0000024
Ensembl RGD UniProt
PMID:19047684
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:48,774,985...48,788,245
Ensembl chr 6:43,047,658...43,059,699
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Sash3
SAM and SH3 domain containing 3
acts_upstream_of
ISO
MGI:3716944 (PMID:16227612)
RGD
PMID:16227612
NCBI chr X:132,204,717...132,219,421
Ensembl chr X:127,326,859...127,341,519
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Satb1
SATB homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386676 (PMID:10716941)
RGD
PMID:10716941
NCBI chr 9:4,916,958...5,010,359
Ensembl chr 9:4,680,920...4,753,251
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Ctsl
cathepsin L
involved_in
ISS ISO
GO_REF:0000024 (PMID:9545226)
UniProt RGD
PMID:9545226
GO_REF:0000024
NCBI chr17:770,104...776,266
Ensembl chr17:764,309...770,548
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Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:18195075)
RGD
PMID:18195075
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
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Foxp3
forkhead box P3
involved_in acts_upstream_of
ISO
(PMID:22079196) MGI:1857034|MGI:3696705 (PMID:16275384), (PMID:16301745), (PMID:18573908)
RGD
PMID:16275384 PMID:16301745 PMID:18573908 PMID:22079196
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
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Fut7
fucosyltransferase 7
acts_upstream_of_or_within
ISO
MGI:2387664 (PMID:18573908)
RGD
PMID:18573908
NCBI chr 3:28,635,913...28,640,407
Ensembl chr 3:8,239,384...8,242,260
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Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of
ISO
MGI:1857455 (PMID:16227984)
RGD
PMID:16227984
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
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Ncor1
nuclear receptor co-repressor 1
acts_upstream_of_or_within
ISO
MGI:2677822 (PMID:11030619)
RGD
PMID:11030619
NCBI chr10:47,498,852...47,641,612
Ensembl chr10:46,999,536...47,141,032
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Pla2g2d
phospholipase A2, group IID
acts_upstream_of_or_within
ISO
(PMID:19564598)
RGD
PMID:19564598
NCBI chr 5:156,299,374...156,305,816
Ensembl chr 5:151,018,870...151,022,525
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Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:18195075)
RGD
PMID:18195075
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
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Gpr18
G protein-coupled receptor 18
acts_upstream_of_or_within
ISO
MGI:5708707 (PMID:25348153)
RGD
PMID:25348153
NCBI chr15:98,997,427...99,001,177
Ensembl chr15:98,997,259...99,001,470
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Gimap1
GTPase, IMAP family member 1
acts_upstream_of_or_within
ISO
MGI:2449947|MGI:4459837 (PMID:20194894)
RGD
PMID:20194894
NCBI chr 4:77,687,581...77,691,468
Ensembl chr 4:77,682,171...77,691,866
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Irf1
interferon regulatory factor 1
acts_upstream_of_or_within
ISO
MGI:1857205 (PMID:11359801)
RGD
PMID:11359801
NCBI chr10:38,417,935...38,424,946
Ensembl chr10:37,916,670...37,924,166
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Otud5
OTU deubiquitinase 5
acts_upstream_of_or_within
ISO
MGI:2386448|MGI:5752247 (PMID:25470037)
RGD
PMID:25470037
NCBI chr X:17,296,750...17,331,257
Ensembl chr X:14,626,164...14,659,573
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Pax1
paired box 1
acts_upstream_of_or_within
ISO
MGI:3603176 (PMID:16093716)
RGD
PMID:16093716
NCBI chr 3:155,244,961...155,254,836
Ensembl chr 3:134,789,182...134,801,636
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Psmb11
proteasome subunit beta 11
acts_upstream_of_or_within
ISO
MGI:3716870 (PMID:17540904), (PMID:31915251)
RGD
PMID:17540904 PMID:31915251
NCBI chr15:32,054,747...32,055,666
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Satb1
SATB homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386676 (PMID:10716941), (PMID:15814699)
RGD
PMID:10716941 PMID:15814699
NCBI chr 9:4,916,958...5,010,359
Ensembl chr 9:4,680,920...4,753,251
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Tnfsf8
TNF superfamily member 8
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3054968 (PMID:16177108)
GO_Central RGD
PMID:16177108
GO_REF:0000033
NCBI chr 5:82,266,436...82,292,858
Ensembl chr 5:77,251,373...77,277,421
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Eomes
eomesodermin
involved_in
ISO IBA
(PMID:17566017) (PMID:14605368) GO_REF:0000033
RGD GO_Central
PMID:14605368 PMID:17566017
GO_REF:0000033
NCBI chr 8:127,059,215...127,067,070
Ensembl chr 8:118,181,777...118,188,316
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Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:17277142)
RGD
PMID:17277142
NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375
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Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2156165 (PMID:8170972)
Ensembl RGD
PMID:8170972
GO_REF:0000107
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:11850626), (PMID:15078895)
RGD
PMID:11850626 PMID:15078895
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
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Gli3
GLI family zinc finger 3
involved_in
ISO
(PMID:19667090)
RGD
PMID:19667090
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
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Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(PMID:19109233)
RGD
PMID:19109233
NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10981962)
Ensembl RGD
PMID:10981962
GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Cbfb
core-binding factor subunit beta
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
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Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:22473704)
RGD
PMID:22473704
NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Runx1
RUNX family transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18258917)
UniProt RGD
PMID:18258917
GO_REF:0000024
NCBI chr11:45,325,778...45,560,300
Ensembl chr11:31,843,764...32,074,542
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Runx3
RUNX family transcription factor 3
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr 5:152,644,270...152,702,835
Ensembl chr 5:147,360,994...147,419,156
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Slc4a2
solute carrier family 4 member 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:24515893)
UniProt RGD
PMID:24515893
GO_REF:0000024
NCBI chr 4:11,628,860...11,646,961
Ensembl chr 4:10,736,425...10,752,965
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Socs1
suppressor of cytokine signaling 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24880459) GO_REF:0000024
Ensembl RGD UniProt
PMID:24880459
GO_REF:0000024 GO_REF:0000107
NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383
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Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(PMID:22730529), (PMID:24880459)
RGD
PMID:22730529 PMID:24880459
NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236
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Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(PMID:24463518)
RGD
PMID:24463518
NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406
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Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980
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Jak3
Janus kinase 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:16020505)
BHF-UCL RGD
PMID:16020505
GO_REF:0000024
NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:9670042)
RGD
PMID:9670042
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788
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Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(PMID:24463518)
RGD
PMID:24463518
NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406
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Foxp3
forkhead box P3
involved_in
ISO
(PMID:23169781)
RGD
PMID:23169781
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
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Il2
interleukin 2
involved_in
ISO
RNAcentral:URS000039ED8D_10090 (PMID:25642768)
RGD
PMID:25642768
NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566
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Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:18792410)
RGD
PMID:18792410
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
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Pf4
platelet factor 4
IDA
RGD
PMID:24986443
RGD:329901907
NCBI chr14:17,582,477...17,583,392
Ensembl chr14:17,298,308...17,299,365
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Rc3h1
ring finger and CCCH-type domains 1
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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Rc3h2
ring finger and CCCH-type domains 2
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr 3:41,531,319...41,596,496
Ensembl chr 3:21,110,679...21,179,933
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Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:25642768)
Ensembl RGD
PMID:25642768
GO_REF:0000107
NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765
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Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:21151104)
RGD
PMID:21151104
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
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Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3530739 (PMID:23034280)
RGD
PMID:23034280
NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236
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Zc3h12a
zinc finger CCCH type containing 12A
involved_in
ISS ISO
GO_REF:0000024 (PMID:25282160)
UniProt RGD
PMID:25282160
GO_REF:0000024
NCBI chr 5:142,661,193...142,670,051
Ensembl chr 5:137,376,564...137,385,351
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Cd69
Cd69 molecule
involved_in
ISO
(PMID:24752896)
RGD
PMID:24752896
NCBI chr 4:164,411,485...164,419,403
Ensembl chr 4:162,725,446...162,733,542
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Jak3
Janus kinase 3
involved_in
ISO IEA
(PMID:20696842) GO_REF:0000107
RGD Ensembl
PMID:20696842
GO_REF:0000107
NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
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Lgals1
galectin 1
involved_in
ISO IEA
(PMID:24752896) GO_REF:0000107
RGD Ensembl
PMID:24752896
GO_REF:0000107
NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:110,481,392...110,488,345
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Loxl3
lysyl oxidase-like 3
involved_in
ISO
(PMID:28065600)
RGD
PMID:28065600
NCBI chr 4:117,098,358...117,114,673
Ensembl chr 4:115,540,685...115,557,466
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Stat5a
signal transducer and activator of transcription 5A
involved_in
ISO IEA
(PMID:20696842) GO_REF:0000107
RGD Ensembl
PMID:20696842
GO_REF:0000107
NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866
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Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:21151104)
RGD
PMID:21151104
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
G
Tnfsf18
TNF superfamily member 18
involved_in
ISO
(PMID:24107315)
RGD
PMID:24107315
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
G
Anxa1
annexin A1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:17008549)
UniProt Ensembl RGD
PMID:17008549
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(PMID:24463518)
RGD
PMID:24463518
NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:96559 (PMID:12594267)
RGD
PMID:12594267
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Hlx
H2.0-like homeobox
acts_upstream_of_or_within
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750
G
Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(PMID:12242343)
RGD
PMID:12242343
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
G
Zfp35
zinc finger protein 35
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr18:15,268,852...15,284,334
Ensembl chr18:15,268,814...15,285,088
G
Rc3h1
ring finger and CCCH-type domains 1
acts_upstream_of_or_within
ISO
MGI:3581675 (PMID:15917799)
RGD
PMID:15917799
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
G
Atf2
activating transcription factor 2
involved_in
IEA ISO
GO_REF:0000107 MGI:3696689 (PMID:16223777)
Ensembl RGD
PMID:16223777
GO_REF:0000107
NCBI chr 3:79,125,814...79,202,896
Ensembl chr 3:58,718,332...58,795,236
G
Cd1d1
CD1d1 molecule
involved_in
ISO
(PMID:9133426)
RGD
PMID:9133426
NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089
G
Fosl2
FOS like 2, AP-1 transcription factor subunit
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3521818 (PMID:19620306)
Ensembl RGD
PMID:19620306
GO_REF:0000107
NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034
G
Itk
IL2-inducible T-cell kinase
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:102960|MGI:2178928 (PMID:18292523)
GO_Central RGD
PMID:18292523
GO_REF:0000033
NCBI chr10:31,254,667...31,316,004
Ensembl chr10:30,753,344...30,814,685
G
Psap
prosaposin
acts_upstream_of_or_within
ISO
MGI:1888378 (PMID:14684827)
RGD
PMID:14684827
NCBI chr20:28,756,951...28,783,422
Ensembl chr20:28,214,271...28,240,498
G
Txk
TXK tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:96621 (PMID:18292523)
RGD
PMID:18292523
NCBI chr14:35,817,270...35,873,454
Ensembl chr14:35,463,944...35,519,448
G
Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(PMID:23105140)
RGD
PMID:23105140
NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236
G
Zfp683
zinc finger protein 683
acts_upstream_of_or_within
ISO
MGI:4276801 (PMID:22885984)
RGD
PMID:22885984
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Kctd9
potassium channel tetramerization domain containing 9
acts_upstream_of_or_within
ISO
(PMID:31024568)
RGD
PMID:31024568
NCBI chr15:46,117,211...46,145,258
Ensembl chr15:41,942,381...41,969,862
G
Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:18195075)
RGD
PMID:18195075
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
G
Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117 (PMID:11067867), (PMID:12163459), (PMID:16670300)
Ensembl RGD
PMID:11067867 PMID:12163459 PMID:16670300
GO_REF:0000107
NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
G
Gli3
GLI family zinc finger 3
involved_in
ISO
(PMID:15855276)
RGD
PMID:15855276
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(PMID:19109233)
RGD
PMID:19109233
NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532
G
Itpkb
inositol-trisphosphate 3-kinase B
acts_upstream_of_or_within
ISO
MGI:3039799 (PMID:15064401)
RGD
PMID:15064401
NCBI chr13:94,601,072...94,696,180
Ensembl chr13:92,069,216...92,162,004
G
Nkap
NFKB activating protein
involved_in
ISO ISS
(PMID:19409814) GO_REF:0000024
RGD UniProt
PMID:19409814
GO_REF:0000024
NCBI chr X:116,373,031...116,392,677
Ensembl chr X:116,372,839...116,394,945
G
Pnp
purine nucleoside phosphorylase
acts_upstream_of_or_within
ISO
(PMID:16964310)
RGD
PMID:16964310
NCBI chr15:26,644,147...26,651,808
Ensembl chr15:24,170,602...24,203,986
G
Rhoa
ras homolog family member A
involved_in
ISO
(PMID:25398325)
RGD
PMID:25398325
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:14764698) GO_REF:0000024
Ensembl RGD UniProt
PMID:14764698
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:99613 (PMID:9275205)
Ensembl RGD
PMID:9275205
GO_REF:0000107
NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
G
Zap70
zeta chain of T cell receptor associated protein kinase 70
acts_upstream_of_or_within
ISO
MGI:2677447|MGI:3526403|MGI:99515 (PMID:7630421), (PMID:9208839), (PMID:9275205)
RGD
PMID:7630421 PMID:9208839 PMID:9275205
NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700
G
Cd83
CD83 molecule
acts_upstream_of_or_within
ISO
MGI:3055293 (PMID:15322158)
RGD
PMID:15322158
NCBI chr17:21,093,281...21,113,223
Ensembl chr17:20,887,309...20,907,083
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
(PMID:17028180)
RGD
PMID:17028180
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024
NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934
G
Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within
ISO
MGI:3716944 (PMID:16227612)
RGD
PMID:16227612
NCBI chr X:132,204,717...132,219,421
Ensembl chr X:127,326,859...127,341,519
G
Socs1
suppressor of cytokine signaling 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24880459) GO_REF:0000024
Ensembl RGD UniProt
PMID:24880459
GO_REF:0000024 GO_REF:0000107
NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:20639485)
RGD
PMID:20639485
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788
G
Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(PMID:24880459)
RGD
PMID:24880459
NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:1857034|MGI:2654936|MGI:3696705 (PMID:12612578), (PMID:16275384), (PMID:16301745), (PMID:18573908)
RGD
PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
G
Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:15778366
RGD:2303772
NCBI chr 4:79,025,151...79,031,917
Ensembl chr 4:77,687,564...77,703,086
G
Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of_or_within
ISO
MGI:1857455 (PMID:16227984)
RGD
PMID:16227984
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
G
Klhl25
kelch-like family member 25
involved_in
ISO ISS
(PMID:34491895) GO_REF:0000024
RGD UniProt
PMID:34491895
GO_REF:0000024
NCBI chr 1:129,724,894...129,750,142
Ensembl chr 1:129,722,026...129,750,227
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:28467828)
RGD
PMID:28467828
NCBI chr20:4,515,393...4,520,387
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:28467828)
RGD
PMID:28467828
NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,548,666...4,558,258
G
Ifng
interferon gamma
involved_in
ISO
(PMID:20209097)
RGD
PMID:20209097
NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375
G
Lgals9
galectin 9
involved_in
ISO
(PMID:20209097)
RGD
PMID:20209097
NCBI chr10:64,405,044...64,428,249
Ensembl chr10:63,907,018...63,930,045
G
Cbfb
core-binding factor subunit beta
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:18420485)
RGD
PMID:18420485
NCBI chr 1:78,847,685...78,853,294
Ensembl chr 1:69,805,250...69,810,660
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024
NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934
G
Runx1
RUNX family transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18258917)
UniProt RGD
PMID:18258917
GO_REF:0000024
NCBI chr11:45,325,778...45,560,300
Ensembl chr11:31,843,764...32,074,542
G
Runx3
RUNX family transcription factor 3
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr 5:152,644,270...152,702,835
Ensembl chr 5:147,360,994...147,419,156
G
Ap3b1
adaptor related protein complex 3 subunit beta 1
acts_upstream_of_or_within
ISO
MGI:1856989 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 2:27,331,241...27,535,683
Ensembl chr 2:25,600,040...25,800,935
G
Ap3d1
adaptor related protein complex 3 subunit delta 1
acts_upstream_of_or_within
ISO
MGI:1856083 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 7:9,620,909...9,656,350
Ensembl chr 7:8,970,291...9,005,643
G
Cd1d1
CD1d1 molecule
acts_upstream_of_or_within
ISO
MGI:2180711|MGI:2180713 (PMID:10201995), (PMID:9133426)
RGD
PMID:9133426 PMID:10201995
NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2183502|MGI:2386448 (PMID:16973387)
Ensembl RGD
PMID:16973387
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Zbtb16
zinc finger and BTB domain containing 16
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:57,885,886...58,073,507
Ensembl chr 8:48,994,566...49,177,011
G
Anxa1
annexin A1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:17008549)
UniProt Ensembl RGD
PMID:17008549
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343
G
Ccl19
C-C motif chemokine ligand 19
involved_in
ISO
(PMID:15845453)
RGD
PMID:15845453
NCBI chr 5:61,759,220...61,761,164
Ensembl chr 5:56,963,364...56,965,308
G
Hlx
H2.0-like homeobox
acts_upstream_of_or_within
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2446070 (PMID:11894097)
RGD
PMID:11894097
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:29,631,570...29,662,657
G
Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(PMID:12242343)
RGD
PMID:12242343
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
G
Malt1
MALT1 paracaspase
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260
G
Mir326
microRNA 326
acts_upstream_of_or_within
ISO
(PMID:19838199)
RGD
PMID:19838199
NCBI chr 1:163,266,165...163,266,259
Ensembl chr 1:153,854,029...153,854,123
G
Nfkbid
NFKB inhibitor delta
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
G
Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811
G
Brd2
bromodomain containing 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28262505)
UniProt RGD
PMID:28262505
GO_REF:0000024
NCBI chr20:4,728,282...4,737,286
Ensembl chr20:4,728,151...4,735,388
G
Brd4
bromodomain containing 4
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:11,866,997...11,946,575
Ensembl chr 7:11,216,446...11,295,539
G
Ep300
E1A binding protein p300
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Il23a
interleukin 23 subunit alpha
involved_in
IBA ISO
GO_REF:0000033 (PMID:19501566)
GO_Central RGD
PMID:19501566
GO_REF:0000033
NCBI chr 7:1,306,320...1,308,434
Ensembl chr 7:721,809...723,923
G
Opa1
OPA1, mitochondrial dynamin like GTPase
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:36171294)
UniProt Ensembl RGD
PMID:36171294
GO_REF:0000024 GO_REF:0000107
NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109
G
Il18
interleukin 18
involved_in
IEA ISO
GO_REF:0000107 (PMID:12829194)
Ensembl RGD
PMID:12829194
GO_REF:0000107
NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887
G
Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980
G
Il6
interleukin 6
acts_upstream_of_or_within
ISO
(PMID:12594267)
RGD
PMID:12594267
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811
G
Prkcz
protein kinase C, zeta
involved_in
ISS ISO
GO_REF:0000024 (PMID:15987782)
UniProt RGD
PMID:15987782
GO_REF:0000024
NCBI chr 5:171,101,774...171,212,694
Ensembl chr 5:165,819,466...165,930,367
G
Rara
retinoic acid receptor, alpha
involved_in
ISO
(PMID:18416830)
RGD
PMID:18416830
NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:18354165)
RGD
PMID:18354165
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788
G
Shb
SH2 domain containing adaptor protein B
acts_upstream_of_or_within
ISO
MGI:3721903 (PMID:24645804)
RGD
PMID:24645804
NCBI chr 5:64,473,694...64,581,072
Ensembl chr 5:59,678,216...59,785,538
G
Ankle1
ankyrin repeat and LEM domain containing 1
NOT|involved_in
ISO
(PMID:27010503)
RGD
PMID:27010503
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Sh3rf1
SH3 domain containing ring finger 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:27084103)
UniProt RGD
PMID:27084103
GO_REF:0000024
NCBI chr16:28,735,522...28,901,261
Ensembl chr16:28,735,440...28,901,644
G
Kcnk18
potassium two pore domain channel subfamily K member 18
involved_in
ISS ISO
GO_REF:0000024 (PMID:34702947)
UniProt RGD
PMID:34702947
GO_REF:0000024
NCBI chr 1:258,374,671...258,388,945
Ensembl chr 1:258,374,671...258,388,945
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3817628 (PMID:18776904)
RGD
PMID:18776904
NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236
G
Prdm1
PR/SET domain 1
involved_in
ISO
(PMID:27102484)
RGD
PMID:27102484
NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488
G
Zfp683
zinc finger protein 683
involved_in
ISO
(PMID:27102484)
RGD
PMID:27102484
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Il27
interleukin 27
involved_in
ISO IBA
(PMID:12734330) GO_REF:0000033
RGD GO_Central
PMID:12734330
GO_REF:0000033
NCBI chr 1:190,603,684...190,609,292
Ensembl chr 1:181,173,372...181,178,582
G
Ccl20
C-C motif chemokine ligand 20
NOT|involved_in
ISO
(PMID:19050256)
RGD
PMID:19050256
NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:84,388,904...84,391,629
G
Ccr6
C-C motif chemokine receptor 6
NOT|involved_in
ISO
(PMID:19050256)
RGD
PMID:19050256
NCBI chr 1:55,022,037...55,055,857
Ensembl chr 1:52,474,168...52,498,603
G
Mir301a
microRNA 301a
acts_upstream_of_or_within
ISO
(PMID:22517757)
RGD
PMID:22517757
NCBI chr10:72,422,599...72,422,698
Ensembl chr10:71,925,336...71,925,435
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:3487291 (PMID:18776904)
RGD
PMID:18776904
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Il12rb2
interleukin 12 receptor subunit beta 2
NAS
RGD
PMID:10651948
RGD:1331512
NCBI chr 4:97,756,089...97,844,937
Ensembl chr 4:96,426,842...96,515,289
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,515,393...4,520,387
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,548,666...4,558,258
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3817628 (PMID:18776904)
RGD
PMID:18776904
NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(PMID:24463518)
RGD
PMID:24463518
NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406
G
Foxp1
forkhead box P1
involved_in
ISO
(PMID:24859450)
RGD
PMID:24859450
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
G
Gpr183
G protein-coupled receptor 183
involved_in
ISS ISO
GO_REF:0000024 (PMID:27147029)
UniProt RGD
PMID:27147029
GO_REF:0000024
NCBI chr15:105,445,129...105,457,192
Ensembl chr15:99,036,367...99,050,559
G
Icos
inducible T-cell co-stimulator
involved_in
ISO IEA
(PMID:27135603) GO_REF:0000107
RGD Ensembl
PMID:27135603
GO_REF:0000107
NCBI chr 9:62,368,075...62,406,900
Ensembl chr 9:62,383,832...62,405,672
G
Icoslg
inducible T-cell co-stimulator ligand
involved_in
ISO
(PMID:24411167)
RGD
PMID:24411167
NCBI chr20:10,600,078...10,610,385
Ensembl chr20:10,600,420...10,610,703
G
Il21
interleukin 21
involved_in
ISS ISO
GO_REF:0000024 (PMID:23045607)
UniProt RGD
PMID:23045607
GO_REF:0000024
NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996
G
Il6
interleukin 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:23045607)
UniProt RGD
PMID:23045607
GO_REF:0000024
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Pik3r1
phosphoinositide-3-kinase regulatory subunit 1
involved_in
ISO IEA
(PMID:30523347) GO_REF:0000107
RGD Ensembl
PMID:30523347
GO_REF:0000107
NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631
G
Rc3h1
ring finger and CCCH-type domains 1
acts_upstream_of_or_within
ISO
MGI:2442789 (PMID:23583643)
RGD
PMID:23583643
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
G
Rc3h2
ring finger and CCCH-type domains 2
acts_upstream_of_or_within
ISO
MGI:2685397 (PMID:23583643)
RGD
PMID:23583643
NCBI chr 3:41,531,319...41,596,496
Ensembl chr 3:21,110,679...21,179,933
G
Tbk1
TANK-binding kinase 1
involved_in
ISO
(PMID:27135603)
RGD
PMID:27135603
NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:57,077,830...57,110,892
G
Cracr2a
calcium release activated channel regulator 2A
involved_in
ISO
(PMID:29987160)
RGD
PMID:29987160
NCBI chr 4:160,428,987...160,517,427
Ensembl chr 4:160,408,077...160,518,107
G
Hlx
H2.0-like homeobox
acts_upstream_of
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750
G
Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:15944249)
RGD
PMID:15944249
NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Il18r1
interleukin 18 receptor 1
acts_upstream_of_or_within
ISO
MGI:2136765 (PMID:10227969)
RGD
PMID:10227969
NCBI chr 9:50,223,274...50,257,370
Ensembl chr 9:42,727,869...42,760,715
G
Il4r
interleukin 4 receptor
acts_upstream_of
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980
G
Lef1
lymphoid enhancer binding factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18579517)
Ensembl RGD
PMID:18579517
GO_REF:0000107
NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794
G
Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
MGI:3046930 (PMID:31182790)
RGD
PMID:31182790
NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723
G
Relb
RELB proto-oncogene, NF-kB subunit
acts_upstream_of_or_within
ISO
MGI:2179545 (PMID:16081776)
RGD
PMID:16081776
NCBI chr 1:88,385,717...88,413,380
Ensembl chr 1:79,257,725...79,285,507
G
Sema4a
semaphorin 4A
involved_in
ISO
(PMID:15780988)
RGD
PMID:15780988
NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:173,896,439...173,914,442
G
Stat4
signal transducer and activator of transcription 4
involved_in
ISO
(PMID:14688310)
RGD
PMID:14688310
NCBI chr 9:56,964,617...57,080,523
Ensembl chr 9:49,419,340...49,588,540
G
Tmem98
transmembrane protein 98
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25946230) GO_REF:0000107
UniProt RGD Ensembl
PMID:25946230
GO_REF:0000024 GO_REF:0000107
NCBI chr10:66,293,895...66,304,806
Ensembl chr10:65,796,145...65,807,079
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
MGI:103034 (PMID:20706986)
RGD
PMID:20706986
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Mtor
mechanistic target of rapamycin kinase
involved_in
IEA ISO
GO_REF:0000107 (PMID:26410627)
Ensembl RGD
PMID:26410627
GO_REF:0000107
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
G
Spn
sialophorin
involved_in
ISO ISS
(PMID:18036228) GO_REF:0000024
RGD UniProt
PMID:18036228
GO_REF:0000024
NCBI chr 1:191,177,449...191,190,115
Ensembl chr 1:181,746,429...181,759,628
G
Stat6
signal transducer and activator of transcription 6
acts_upstream_of_or_within
ISO
MGI:96556 (PMID:20706986)
RGD
PMID:20706986
NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:10761931)
RGD
PMID:10761931
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
G
Batf
basic leucine zipper ATF-like transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:20421391), (PMID:21572431)
UniProt RGD
PMID:20421391 PMID:21572431
GO_REF:0000024
NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051
G
Entpd7
ectonucleoside triphosphate diphosphohydrolase 7
involved_in
ISO
(PMID:23241884)
RGD
PMID:23241884
NCBI chr 1:242,559,365...242,601,044
Ensembl chr 1:242,559,365...242,601,447
G
Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
MGI:3046930 (PMID:20383124)
RGD
PMID:20383124
NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723
G
Rora
RAR-related orphan receptor A
involved_in
ISO
(PMID:18164222)
RGD
PMID:18164222
NCBI chr 8:78,182,710...78,915,730
Ensembl chr 8:69,301,733...70,025,931
G
Rorc
RAR-related orphan receptor C
acts_upstream_of_or_within involved_in
ISO
(PMID:18792410) (PMID:16990136), (PMID:18164222) MGI:2386114 (PMID:20383124)
RGD
PMID:16990136 PMID:18164222 PMID:18792410 PMID:20383124
NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907
G
Batf
basic leucine zipper ATF-like transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:19578362), (PMID:22983707)
UniProt RGD
PMID:19578362 PMID:22983707
GO_REF:0000024
NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051
G
Il6
interleukin 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:16990136), (PMID:27893700)
UniProt RGD
PMID:16990136 PMID:27893700
GO_REF:0000024
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Il6r
interleukin 6 receptor
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:27893700) GO_REF:0000107
UniProt RGD Ensembl
PMID:27893700
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:175,298,686...175,347,536
G
Irf4
interferon regulatory factor 4
involved_in
ISO
(PMID:22983707)
RGD
PMID:22983707
NCBI chr17:33,930,460...33,948,842
Ensembl chr17:33,721,811...33,740,070
G
Ly9
lymphocyte antigen 9
involved_in
ISO
(PMID:22184727)
RGD
PMID:22184727
NCBI chr13:86,610,762...86,633,314
Ensembl chr13:84,079,458...84,100,823
G
Otud5
OTU deubiquitinase 5
acts_upstream_of_or_within
ISO
MGI:2386448|MGI:5752247 (PMID:25470037)
RGD
PMID:25470037
NCBI chr X:17,296,750...17,331,257
Ensembl chr X:14,626,164...14,659,573
G
Slamf6
SLAM family member 6
involved_in
ISO
(PMID:22184727)
RGD
PMID:22184727
NCBI chr13:86,916,956...86,937,697
Ensembl chr13:84,383,742...84,405,300
G
Stat3
signal transducer and activator of transcription 3
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28065600) GO_REF:0000107
UniProt RGD Ensembl
PMID:28065600
GO_REF:0000024 GO_REF:0000107
NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057
G
Batf
basic leucine zipper ATF-like transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:20421391), (PMID:21572431)
UniProt RGD
PMID:20421391 PMID:21572431
GO_REF:0000024
NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051
G
Bcl3
BCL3, transcription coactivator
acts_upstream_of_or_within
ISO
MGI:2158443 (PMID:16081776)
RGD
PMID:16081776
NCBI chr 1:88,599,321...88,613,555
Ensembl chr 1:79,471,369...79,485,607
G
Bcl6
BCL6, transcription repressor
acts_upstream_of
ISO
MGI:96559 (PMID:12594267)
RGD
PMID:12594267
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Gata3
GATA binding protein 3
involved_in acts_upstream_of_or_within
ISO
(PMID:20484083) (PMID:20706986)
RGD
PMID:20484083 PMID:20706986
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Hlx
H2.0-like homeobox
acts_upstream_of
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:20706986)
RGD
PMID:20706986
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Il4r
interleukin 4 receptor
acts_upstream_of
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980
G
Il6
interleukin 6
acts_upstream_of
ISO
(PMID:12594267)
RGD
PMID:12594267
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Kmt2a
lysine methyltransferase 2A
involved_in
ISO
(PMID:20484083)
RGD
PMID:20484083
NCBI chr 8:54,013,547...54,089,219
Ensembl chr 8:45,118,814...45,193,181
G
Men1
menin 1
involved_in
ISO IEA
(PMID:20484083) GO_REF:0000107
RGD Ensembl
PMID:20484083
GO_REF:0000107
NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871
G
Myb
MYB proto-oncogene, transcription factor
involved_in
ISO
(PMID:20484083)
RGD
PMID:20484083
NCBI chr 1:17,759,309...17,793,306
Ensembl chr 1:15,939,761...15,973,057
G
Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856466 (PMID:8434133)
RGD
PMID:8434133
NCBI chr X:75,159,635...75,267,094
Ensembl chr X:71,094,202...71,198,354
G
Il12b
interleukin 12B
involved_in
ISO
(PMID:1673147)
RGD
PMID:1673147
NCBI chr10:29,390,300...29,405,194
Ensembl chr10:28,893,008...28,902,903
G
Pdp2
pyruvate dehydrogenase phosphatase catalytic subunit 2
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr19:392,858...400,529
Ensembl chr19:386,406...394,074
G
Ptger4
prostaglandin E receptor 4
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19465928) GO_REF:0000107
UniProt RGD Ensembl
PMID:19465928
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:54,335,424...54,346,670
G
Rorc
RAR-related orphan receptor C
involved_in
ISO
(PMID:14691482)
RGD
PMID:14691482
NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907
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