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ONTOLOGY REPORT - ANNOTATIONS

Term:membrane lipid biosynthetic process
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Accession:GO:0046467 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane.
Synonyms:exact_synonym: membrane lipid anabolism;   membrane lipid biosynthesis;   membrane lipid formation;   membrane lipid synthesis


show annotations for term's descendants           Sort by:
ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr  X:33,925,458...33,972,851
Ensembl chr  X:33,925,458...33,971,596 		JBrowse link
G Agk acylglycerol kinase involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
(PMID:15252046)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:15252046 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:70,081,550...70,160,642
Ensembl chr 4:70,081,035...70,160,709 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:17403930)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:17403930 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,361,898...54,373,776
Ensembl chr10:54,361,898...54,373,776 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
(PMID:22832496)
MGI:5496904 (PMID:22832496)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22832496 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,329,224...54,353,167
Ensembl chr10:54,329,043...54,353,166 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO
ISS 		(PMID:12764132), (PMID:12815059)
GO_REF:0000024 		RGD
UniProt		 PMID:12764132 PMID:12815059 GO_REF:0000024 NCBI chr16:57,669,927...57,701,349
Ensembl chr16:57,669,750...57,718,305 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO
IEA
IDA 		(PMID:11278489), (PMID:17475390)
(PMID:21613224)
GO_REF:0000117
PMID:15123644 		RGD
UniProt		 PMID:11278489 PMID:17475390 PMID:21613224 PMID:15123644 PMID:11278489 GO_REF:0000117, RGD:13838793, RGD:13838803 NCBI chr 1:239,278,994...239,386,598
Ensembl chr 1:239,278,994...239,382,024 		JBrowse link
G Casp7 caspase 7 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:265,442,647...265,481,938
Ensembl chr 1:265,442,676...265,482,512 		JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:12105227), (PMID:12869556), (PMID:15823095), (PMID:17548428), (PMID:18541923), (PMID:22922758), (PMID:24782409)
(PMID:16951403), (PMID:17977534), (PMID:21625621), (PMID:26620563), (PMID:30605666) 		RGD PMID:12105227 PMID:12869556 PMID:15823095 PMID:16951403 PMID:17548428 More... NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480 		JBrowse link
G Cers2 ceramide synthase 2 involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
(PMID:19801672), (PMID:26620563), (PMID:38961186)
(PMID:15823095)
(PMID:17977534), (PMID:18165233), (PMID:29632068), (PMID:36170811)
GO_REF:0000002
GO_REF:0000117
GO_REF:0000107 		GO_Central
RGD
InterPro
UniProt
Ensembl		 PMID:15823095 PMID:17977534 PMID:18165233 PMID:19801672 PMID:26620563 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:185,579,119...185,588,839 		JBrowse link
G Cers3 ceramide synthase 3 involved_in ISO
IEA
IBA 		(PMID:17977534), (PMID:22038835), (PMID:23754960)
(PMID:22038835)
GO_REF:0000117
GO_REF:0000002
GO_REF:0000033 		RGD
UniProt
InterPro
GO_Central		 PMID:17977534 PMID:22038835 PMID:23754960 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr 1:129,728,136...129,833,182
Ensembl chr 1:129,677,781...129,833,181 		JBrowse link
G Cers4 ceramide synthase 4 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:17977534), (PMID:29632068)
(PMID:12912983), (PMID:15823095)
GO_REF:0000002
GO_REF:0000117
GO_REF:0000033 		RGD
InterPro
UniProt
GO_Central		 PMID:12912983 PMID:15823095 PMID:17977534 PMID:29632068 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr12:7,649,610...7,688,066
Ensembl chr12:7,649,610...7,688,070 		JBrowse link
G Cers5 ceramide synthase 5 involved_in ISO
IEA
IBA 		(PMID:16951403), (PMID:29632068)
(PMID:16100120), (PMID:17609214), (PMID:17977534), (PMID:38961186)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000117
GO_REF:0000033 		RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:16100120 PMID:16951403 PMID:17609214 PMID:17977534 PMID:29632068 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:132,738,834...132,776,920
Ensembl chr 7:132,738,834...132,776,786 		JBrowse link
G Cers6 ceramide synthase 6 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:17609214), (PMID:17977534)
(PMID:15823095)
(PMID:23760501), (PMID:26620563)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000117
GO_REF:0000033 		RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:15823095 PMID:17609214 PMID:17977534 PMID:23760501 PMID:26620563 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:74,038,520...74,287,544
Ensembl chr 3:74,038,851...74,287,544 		JBrowse link
G Cyp4f39 cytochrome P450, family 4, subfamily f, polypeptide 39 involved_in ISO
IEA
IBA 		(PMID:26056268)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:26056268 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:12,082,821...12,156,076
Ensembl chr 7:12,083,888...12,156,076 		JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
MGI:3529540 (PMID:22984457)
(PMID:16120614)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:16120614 PMID:22984457 GO_REF:0000033 GO_REF:0000107 NCBI chr13:96,478,645...96,485,302
Ensembl chr13:96,478,646...96,485,302 		JBrowse link
G Degs1l1 delta(4)-desaturase, sphingolipid 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:95,304,394...95,351,648
Ensembl chr13:95,309,352...95,349,335 		JBrowse link
G Degs1l2 delta(4)-desaturase, sphingolipid 1 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:95,363,287...95,371,000
Ensembl chr13:95,363,345...95,370,993 		JBrowse link
G Degs2 delta(4)-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
(PMID:16571104) 		GO_Central
RGD		 PMID:16571104 GO_REF:0000033 NCBI chr 6:133,360,449...133,377,677
Ensembl chr 6:133,360,457...133,364,422 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO (PMID:23689133) RGD PMID:23689133 NCBI chr 5:137,246,781...137,251,351
Ensembl chr 5:137,246,849...137,251,352 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISO
IEA
ISS 		(PMID:15337768)
(PMID:22517924)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:15337768 PMID:22517924 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,222,240...56,273,480
Ensembl chr19:56,222,242...56,273,623 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO
IEA 		(PMID:19279011)
GO_REF:0000107 		RGD
Ensembl		 PMID:19279011 GO_REF:0000107 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:176,907,154...176,916,985 		JBrowse link
G Gdf1 growth differentiation factor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480 		JBrowse link
G Gsdmd gasdermin D acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:109,423,209...109,427,771
Ensembl chr 7:109,422,910...109,430,722 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in ISO (PMID:16120614) RGD PMID:16120614 NCBI chr13:23,374,101...23,408,779
Ensembl chr13:23,376,779...23,408,897 		JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase acts_upstream_of ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:37653044) 		UniProt
Ensembl
RGD		 PMID:37653044 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:149,313,765...149,339,964
Ensembl chr 5:149,313,774...149,342,825 		JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:16325464) 		Ensembl
RGD		 PMID:16325464 GO_REF:0000107 NCBI chr10:58,117,107...58,132,167
Ensembl chr10:58,117,088...58,132,164 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:16325464) RGD PMID:16325464 NCBI chr12:39,550,531...39,594,984
Ensembl chr12:39,540,567...39,595,193 		JBrowse link
G Pnpla1 patatin-like phospholipase domain containing 1 involved_in ISO (PMID:27751867) RGD PMID:27751867 NCBI chr20:6,919,689...6,953,850
Ensembl chr20:6,919,115...6,955,143 		JBrowse link
G Prf1 perforin 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:29,789,040...29,794,550
Ensembl chr20:29,788,972...29,795,124 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in
acts_upstream_of_or_within 		ISO (PMID:19506037)
MGI:5749225 (PMID:25605874)
(PMID:25667419) 		RGD PMID:19506037 PMID:25605874 PMID:25667419 NCBI chr15:2,561,435...2,611,702
Ensembl chr15:2,561,435...2,607,052 		JBrowse link
G Sgms1 sphingomyelin synthase 1 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:25605874)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:25605874 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:239,409,991...239,505,774 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
MGI:4818459 (PMID:25605874)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:25605874 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:222,567,661...222,641,804
Ensembl chr 2:222,567,664...222,590,807 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IMP
ISO
IEA
IBA 		(PMID:35705808), (PMID:8706124)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033
(PMID:17303575), (PMID:18815062), (PMID:19279011), (PMID:20807762), (PMID:33163980), (PMID:8706124) 		RGD
UniProt
Ensembl
GO_Central		 PMID:8706124 PMID:17303575 PMID:18815062 PMID:19279011 PMID:20807762 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:1601344 NCBI chr 1:169,304,772...169,308,615
Ensembl chr 1:169,304,708...169,308,614 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:12473648 GO_REF:0000033, RGD:1581395 NCBI chr20:46,568,627...46,571,741
Ensembl chr20:46,568,629...46,571,741 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in ISO
IEA
IBA 		(PMID:16517606), (PMID:25180167)
(PMID:25180167)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:16517606 PMID:25180167 GO_REF:0000033 GO_REF:0000107 NCBI chr11:96,866,805...96,890,520
Ensembl chr11:96,866,805...96,890,520 		JBrowse link
G Smpd5 sphingomyelin phosphodiesterase 5 involved_in IEA
ISO 		GO_REF:0000107
(PMID:21183079) 		Ensembl
RGD		 PMID:21183079 GO_REF:0000107 NCBI chr 7:109,889,532...109,892,428
Ensembl chr 7:109,889,875...109,893,384 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:25691431)
MGI:3815115 (PMID:16216550)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:16216550 PMID:25691431 GO_REF:0000033 GO_REF:0000107 NCBI chr17:12,029,189...12,068,234
Ensembl chr17:12,029,189...12,068,234 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:25691431)
MGI:3815117 (PMID:16216550)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:16216550 PMID:25691431 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:112,679,623...112,762,640 		JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:147,301,570...147,431,696
Ensembl chr 3:147,301,801...147,434,044 		JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:25691431)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:25691431 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:77,879,931...77,891,344
Ensembl chr 6:77,879,941...77,891,403 		JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B acts_upstream_of_or_within ISO MGI:5689843 (PMID:26438849) RGD PMID:26438849 NCBI chr 2:156,432,509...156,461,936
Ensembl chr 2:156,432,512...156,460,909 		JBrowse link
G Tlcd3b TLC domain containing 3B involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
(PMID:23275342)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:23275342 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:190,851,582...190,870,278
Ensembl chr 1:190,835,208...190,870,277 		JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (PMID:25667419) RGD PMID:25667419 NCBI chr15:2,561,435...2,611,702
Ensembl chr15:2,561,435...2,607,052 		JBrowse link
G Sgms2 sphingomyelin synthase 2 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:25667419) 		Ensembl
RGD		 PMID:25667419 GO_REF:0000107 NCBI chr 2:222,567,661...222,641,804
Ensembl chr 2:222,567,664...222,590,807 		JBrowse link
dolichol phosphate mannose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:33,955,642...33,957,680
Ensembl chr 3:33,954,308...33,958,365 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in ISO
IEA 		(PMID:10835346)
GO_REF:0000107 		RGD
Ensembl		 PMID:10835346 GO_REF:0000107 NCBI chr 3:177,338,855...177,358,398
Ensembl chr 3:177,338,855...177,358,412 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in IEA
ISO 		GO_REF:0000002
(PMID:10835346) 		InterPro
RGD		 PMID:10835346 GO_REF:0000002 NCBI chr 3:36,253,548...36,256,592 JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in ISO (PMID:10835346) RGD PMID:10835346 NCBI chr 2:176,974,290...176,974,805
Ensembl chr15:52,612,418...52,612,696 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in IEA
IBA 		GO_REF:0000107
GO_REF:0000033 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:86,223,827...86,229,886
Ensembl chr13:86,223,899...86,229,888 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
IEA
IMP 		GO_REF:0000024
(PMID:15658937), (PMID:18815260)
GO_REF:0000117
GO_REF:0000107
PMID:17901466
GO_REF:0000041 		UniProt
RGD
Ensembl		 PMID:15658937 PMID:18815260 PMID:17901466 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117, RGD:13825191 NCBI chr19:56,222,240...56,273,480
Ensembl chr19:56,222,242...56,273,623 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
(PMID:10727929)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:10727929 GO_REF:0000033 GO_REF:0000107 NCBI chr14:83,094,265...83,109,992
Ensembl chr14:83,094,385...83,109,978 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IDA
IBA
IEA 		PMID:8713090
GO_REF:0000033
GO_REF:0000041 		GO_Central
UniProt		 PMID:8713090 GO_REF:0000033 GO_REF:0000041, RGD:39458006 NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:216,938,990...217,007,167 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 Beta-1,3-galactosyltransferase 4 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr20:4,937,974...4,939,549
Ensembl chr20:4,937,674...4,939,885 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA
IBA
IDA 		GO_REF:0000024
(PMID:8855236)
MGI:2158349|MGI:96074 (PMID:10021458)
GO_REF:0000107
GO_REF:0000033
PMID:3140234
(PMID:1601877), (PMID:7487055), (PMID:7890749) 		UniProt
RGD
Ensembl
GO_Central		 PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:21201261 NCBI chr 7:64,873,909...64,881,512
Ensembl chr 7:64,874,022...64,881,516 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (PMID:30114188) RGD PMID:30114188 NCBI chr 3:176,437,073...176,453,001
Ensembl chr 3:176,437,073...176,488,978 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISS
ISO 		GO_REF:0000024
(PMID:30114188) 		UniProt
RGD		 PMID:30114188 GO_REF:0000024 NCBI chr18:12,233,350...12,290,204
Ensembl chr18:12,233,351...12,290,204 		JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:8027041)
(PMID:8144500) 		RGD PMID:8027041 PMID:8144500 NCBI chr 7:100,734,300...100,802,443
Ensembl chr 7:100,734,300...100,745,242 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA
ISO 		PMID:8144500
(PMID:22735313), (PMID:8144500)
(PMID:8920913) 		RGD PMID:8144500 PMID:8920913 PMID:22735313 PMID:8144500 RGD:68307 NCBI chr19:55,798,112...55,849,226
Ensembl chr19:55,799,471...55,849,225 		JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in ISO (PMID:22735313) RGD PMID:22735313 NCBI chr 5:136,755,780...136,958,081
Ensembl chr 5:136,755,678...136,955,987 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:244,789,627...245,304,975
Ensembl chr 2:244,789,627...245,304,977 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:244,398,604...244,571,100
Ensembl chr 2:244,402,589...244,571,097 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within ISO (PMID:10702226) RGD PMID:10702226 NCBI chr 3:36,283,573...36,305,217
Ensembl chr 3:36,283,629...36,305,216 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO
IEA 		(PMID:10766765)
GO_REF:0000107 		RGD
Ensembl		 PMID:10766765 GO_REF:0000107 NCBI chr 1:137,172,354...137,247,796
Ensembl chr 1:137,172,354...137,247,792 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO
IEA 		(PMID:10766765)
(PMID:7782326)
GO_REF:0000107 		RGD
Ensembl		 PMID:7782326 PMID:10766765 GO_REF:0000107 NCBI chr18:60,024,555...60,031,050
Ensembl chr18:60,024,236...60,032,473 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO
IEA 		(PMID:10766765)
GO_REF:0000107 		RGD
Ensembl		 PMID:10766765 GO_REF:0000107 NCBI chr 9:103,437,479...103,532,008
Ensembl chr 9:103,437,479...103,532,008 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA
ISO 		GO_REF:0000107
(PMID:11980897) 		Ensembl
RGD		 PMID:11980897 GO_REF:0000107 NCBI chr17:81,649,866...81,847,970
Ensembl chr17:81,653,687...81,792,732 		JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase acts_upstream_of_or_within ISO MGI:3624807|MGI:5445373 (PMID:16476743), (PMID:22875802) RGD PMID:16476743 PMID:22875802 NCBI chr 7:116,248,571...116,272,917
Ensembl chr 7:116,247,880...116,273,171 		JBrowse link
G Plekha8 pleckstrin homology domain containing A8 involved_in ISO (PMID:23913272) RGD PMID:23913272 NCBI chr 4:85,053,765...85,104,376
Ensembl chr 4:85,053,854...85,104,376 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:12716912) 		UniProt
RGD		 PMID:12716912 GO_REF:0000024 NCBI chr19:55,798,112...55,849,226
Ensembl chr19:55,799,471...55,849,225 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21628453)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21628453 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,222,240...56,273,480
Ensembl chr19:56,222,242...56,273,623 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISO
IEA
IBA
ISS 		(PMID:8643456)
(PMID:10430909), (PMID:16109770), (PMID:22851168), (PMID:23748427)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024 		RGD
Ensembl
GO_Central
UniProt		 PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:78,828,006...78,860,725
Ensembl chr 5:78,828,006...78,860,417 		JBrowse link
glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcps decapping enzyme, scavenger involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:41,729,507...41,782,222
Ensembl chr 8:41,724,563...41,782,222 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:83,094,265...83,109,992
Ensembl chr14:83,094,385...83,109,978 		JBrowse link
G Gal3st2 galactose-3-O-sulfotransferase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:101,823,815...101,836,507
Ensembl chr 9:101,823,815...101,836,507 		JBrowse link
G Gal3st3 galactose-3-O-sulfotransferase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:212,022,989...212,032,802
Ensembl chr 1:212,023,000...212,032,801 		JBrowse link
G Gal3st4 galactose-3-O-sulfotransferase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:22,381,576...22,390,566
Ensembl chr12:22,381,576...22,390,824 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:24211208), (PMID:26724485) RGD PMID:24211208 PMID:26724485 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:176,907,154...176,916,985 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:26724485) 		UniProt
RGD		 PMID:26724485 GO_REF:0000024 NCBI chr 5:62,618,176...62,630,160
Ensembl chr 5:62,618,177...62,630,308 		JBrowse link
G Sccpdh saccharopine dehydrogenase (putative) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:93,932,086...93,953,840
Ensembl chr13:93,912,395...93,954,192 		JBrowse link
G Slc35c1 solute carrier family 35 member C1 acts_upstream_of_or_within_negative_effect ISO MGI:3709989 (PMID:18308723) RGD PMID:18308723 NCBI chr 3:98,877,413...98,887,411
Ensembl chr 3:98,877,048...98,884,216 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO
IEA 		(PMID:9266697)
GO_REF:0000107 		RGD
Ensembl		 PMID:9266697 GO_REF:0000107 NCBI chr19:55,798,112...55,849,226
Ensembl chr19:55,799,471...55,849,225 		JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISO
IEA
IBA 		(PMID:8288606)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:8288606 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:41,673,510...41,723,158
Ensembl chr 8:41,673,510...41,712,551 		JBrowse link
G St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 involved_in ISS
IBA
ISO 		GO_REF:0000024
GO_REF:0000033
(PMID:10206952) 		UniProt
GO_Central
RGD		 PMID:10206952 GO_REF:0000024 GO_REF:0000033 NCBI chr11:55,530,120...55,590,950
Ensembl chr11:55,530,248...55,598,720 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:11980897) 		Ensembl
RGD		 PMID:11980897 GO_REF:0000107 NCBI chr17:81,649,866...81,847,970
Ensembl chr17:81,653,687...81,792,732 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:216,938,990...217,007,167 		JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 acts_upstream_of_or_within
involved_in 		IDA
ISO
IBA 		MGI:1347344|MGI:3512453 (PMID:22875802)
GO_REF:0000033
PMID:10854427
PMID:12626403 		RGD
GO_Central		 PMID:22875802 PMID:10854427 PMID:10854427 PMID:12626403 GO_REF:0000033, RGD:1299594, RGD:1299594, RGD:632674 NCBI chr 5:146,385,725...146,398,156
Ensembl chr 5:146,385,746...146,400,043 		JBrowse link
G A4galt alpha 1,4-galactosyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:116,248,571...116,272,917
Ensembl chr 7:116,247,880...116,273,171 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 7:64,873,909...64,881,512
Ensembl chr 7:64,874,022...64,881,516 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:176,437,073...176,453,001
Ensembl chr 3:176,437,073...176,488,978 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IDA
IEA
IBA 		GO_REF:0000117
GO_REF:0000033 		UniProt
GO_Central
RGD		 PMID:9593693 GO_REF:0000033 GO_REF:0000117, RGD:70807 NCBI chr18:12,233,350...12,290,204
Ensembl chr18:12,233,351...12,290,204 		JBrowse link
G Cers2 ceramide synthase 2 involved_in ISO (PMID:34080016) RGD PMID:34080016 NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:185,579,119...185,588,839 		JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in ISO (PMID:34080016) RGD PMID:34080016 NCBI chr13:96,478,645...96,485,302
Ensembl chr13:96,478,646...96,485,302 		JBrowse link
G Fut4 fucosyltransferase 4 involved_in ISO
ISS 		(PMID:29593094)
GO_REF:0000024 		RGD
UniProt		 PMID:29593094 GO_REF:0000024 NCBI chr 8:19,868,178...19,872,139
Ensembl chr 8:19,868,079...19,872,436 		JBrowse link
G Fut4-ps1 fucosyltransferase 4, pseudogene 1 involved_in ISO (PMID:29593094) RGD PMID:29593094 NCBI chr 9:1,656,732...1,659,085 JBrowse link
G Fut9 fucosyltransferase 9 involved_in ISO
ISS 		(PMID:29593094)
GO_REF:0000024 		RGD
UniProt		 PMID:29593094 GO_REF:0000024 NCBI chr 5:44,148,371...44,361,209
Ensembl chr 5:44,146,152...44,362,823 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in ISO (PMID:34080016) RGD PMID:34080016 NCBI chr13:23,374,101...23,408,779
Ensembl chr13:23,376,779...23,408,897 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (PMID:10521438) RGD PMID:10521438 NCBI chr 2:244,398,604...244,571,100
Ensembl chr 2:244,402,589...244,571,097 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:36,283,573...36,305,217
Ensembl chr 3:36,283,629...36,305,216 		JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr18:73,010,235...73,072,984
Ensembl chr18:73,011,383...73,072,991 		JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:30660999) RGD PMID:30660999 NCBI chr15:105,606,082...105,660,715
Ensembl chr15:105,606,118...105,660,714 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in TAS
ISO 		(PMID:34080016) RGD PMID:34080016 PMID:7521399 RGD:70050 NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:216,938,990...217,007,167 		JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07038703.1 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000043 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 Ensembl chr  X:58,534,310...58,535,116 JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000043 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 NCBI chr14:35,108,328...35,154,578
Ensembl chr14:35,108,338...35,154,863 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:9535917), (PMID:9724629)
GO_REF:0000117
UniProtKB:Q4LDX8 (PMID:16280320), (PMID:9535917)
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:9535917 PMID:9724629 PMID:16280320 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:177,338,855...177,358,398
Ensembl chr 3:177,338,855...177,358,412 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in
acts_upstream_of_or_within 		TAS
ISO
IDA 		(PMID:16162815)
PMID:9724629 		RGD PMID:16162815 PMID:9724629 PMID:9724629 RGD:69827, RGD:69827 NCBI chr 3:36,253,548...36,256,592 JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 involved_in TAS
IEA 		GO_REF:0000043 UniProt
RGD		 PMID:10702226 GO_REF:0000043, RGD:1331364 NCBI chr 7:109,932,556...109,936,139
Ensembl chr 7:109,932,544...109,936,138 		JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000117
GO_REF:0000002
GO_REF:0000107
GO_REF:0000043
(PMID:29374258) 		UniProt
InterPro
Ensembl
RGD		 PMID:29374258 GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr18:63,033,329...63,051,461
Ensembl chr18:63,027,281...63,051,461 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IMP
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:14734546 GO_REF:0000033, RGD:1303970 NCBI chr 9:63,470,023...63,538,772
Ensembl chr 9:63,470,024...63,538,772 		JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in IMP
ISO
ISS
IBA
IEA 		PMID:16407401
(PMID:23561846), (PMID:29374258)
GO_REF:0000024
GO_REF:0000033
GO_REF:0000043 		RGD
UniProt
GO_Central		 PMID:23561846 PMID:29374258 PMID:16407401 PMID:29374258 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043, RGD:8553507, RGD:596936197 NCBI chr 1:166,003,593...166,030,088
Ensembl chr 1:166,003,523...166,030,088 		JBrowse link
G Pgap2-ps1 post-GPI attachment to proteins 2, pseudogene 1 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000043 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 NCBI chr  X:58,534,310...58,535,169 JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO
IEA 		(PMID:29374258)
GO_REF:0000002
GO_REF:0000043
GO_REF:0000107 		RGD
InterPro
UniProt
Ensembl		 PMID:29374258 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:83,883,406...83,895,408
Ensembl chr10:83,883,406...83,903,407 		JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISS
IEA
IBA
ISO 		GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033
(PMID:29374258) 		UniProt
InterPro
Ensembl
GO_Central
RGD		 PMID:29374258 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:68,727,422...68,742,571
Ensembl chr 5:68,723,625...68,771,167 		JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A involved_in
acts_upstream_of_or_within 		IEA
ISO
IBA 		GO_REF:0000041
MGI:3652879 (PMID:8611683)
GO_REF:0000043
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033 		UniProt
RGD
InterPro
Ensembl
GO_Central		 PMID:8611683 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr  X:33,672,832...33,687,747
Ensembl chr  X:33,674,923...33,687,636 		JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis, class B involved_in ISO
IEA
IBA 		(PMID:8861954)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:8861954 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:82,622,484...82,656,323
Ensembl chr 8:82,632,445...82,656,323 		JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000002
GO_REF:0000043
GO_REF:0000107
GO_REF:0000041
(PMID:16162815), (PMID:27694521) 		UniProt
InterPro
Ensembl
RGD		 PMID:16162815 PMID:27694521 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr13:76,876,894...76,879,420
Ensembl chr13:76,872,922...76,880,224 		JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis, class F involved_in ISO
IEA
IBA 		(PMID:33386993)
(PMID:10781593)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000043
GO_REF:0000033
GO_REF:0000041 		RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:10781593 PMID:33386993 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:13,343,134...13,371,237
Ensembl chr 6:13,342,869...13,393,214 		JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis, class G acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:15632136)
GO_REF:0000043
GO_REF:0000002
GO_REF:0000033
GO_REF:0000041 		RGD
UniProt
InterPro
GO_Central		 PMID:15632136 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 NCBI chr14:1,549,891...1,578,174
Ensembl chr14:1,549,891...1,578,167 		JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis, class H involved_in ISO
IEA
IBA 		(PMID:16162815)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033
GO_REF:0000041 		RGD
Ensembl
InterPro
GO_Central
UniProt		 PMID:16162815 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 6:103,601,369...103,630,214
Ensembl chr 6:103,601,520...103,630,159 		JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis, class K involved_in IEA GO_REF:0000041
GO_REF:0000043 		UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 2:244,289,928...244,375,394
Ensembl chr 2:244,250,621...244,376,030 		JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L involved_in IDA
IEA
ISO 		GO_REF:0000117
GO_REF:0000107
GO_REF:0000043
PMID:10085243
GO_REF:0000041
(PMID:10085243) 		UniProt
Ensembl
RGD		 PMID:10085243 PMID:9188481 PMID:10085243 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117, RGD:729509, RGD:401901217 NCBI chr10:47,641,478...47,699,200
Ensembl chr10:47,641,098...47,699,453 		JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M involved_in IDA
IBA
ISO
IEA 		GO_REF:0000033
(PMID:11226175)
GO_REF:0000043
GO_REF:0000002
PMID:15635094
GO_REF:0000041 		GO_Central
RGD
UniProt
InterPro		 PMID:11226175 PMID:11226175 PMID:15635094 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043, RGD:70624, RGD:597976622 NCBI chr13:87,370,693...87,374,390
Ensembl chr13:87,368,359...87,376,206 		JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis, class N involved_in IEA
ISO
IBA 		GO_REF:0000041
(PMID:10574991)
GO_REF:0000117
GO_REF:0000033
GO_REF:0000043
GO_REF:0000002 		UniProt
RGD
GO_Central
InterPro		 PMID:10574991 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 NCBI chr13:22,173,670...22,321,344
Ensembl chr13:22,176,576...22,321,379 		JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis, class O involved_in IEA
ISO
IBA 		GO_REF:0000041
(PMID:10781593)
(PMID:28337824)
GO_REF:0000117
GO_REF:0000033
(PMID:24049131), (PMID:24417746), (PMID:28337824)
GO_REF:0000002
GO_REF:0000043 		UniProt
RGD
GO_Central
InterPro		 PMID:10781593 PMID:24049131 PMID:24417746 PMID:28337824 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 NCBI chr 5:62,040,979...62,052,067
Ensembl chr 5:62,037,308...62,052,075 		JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis, class P involved_in
acts_upstream_of_or_within 		ISO
IBA 		(PMID:16162815), (PMID:28334793)
(PMID:10944123)
GO_REF:0000033 		RGD
GO_Central		 PMID:10944123 PMID:16162815 PMID:28334793 GO_REF:0000033 NCBI chr11:47,152,601...47,158,766
Ensembl chr11:47,148,465...47,160,082 		JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis, class Q involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:16162815)
PomBase:SPBC30D10.11|SGD:S000003448 (PMID:10373468), (PMID:9729469)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033 		RGD
Ensembl
InterPro
GO_Central		 PMID:9729469 PMID:10373468 PMID:16162815 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr10:15,447,080...15,463,088
Ensembl chr10:15,447,081...15,463,088 		JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis, class S involved_in IEA GO_REF:0000041
GO_REF:0000043 		UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr10:63,720,568...63,735,255
Ensembl chr10:63,720,661...63,735,253 		JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in ISO
IEA 		(PMID:15034568)
GO_REF:0000043
GO_REF:0000107
GO_REF:0000041 		RGD
UniProt
Ensembl		 PMID:15034568 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:164,245,011...164,341,444
Ensembl chr 3:164,245,011...164,341,912 		JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis, class V involved_in ISO
IEA
IBA 		UniProtKB:P38211 (PMID:15623507), (PMID:15720390)
GO_REF:0000002
GO_REF:0000043
GO_REF:0000033
GO_REF:0000041 		RGD
InterPro
UniProt
GO_Central		 PMID:15623507 PMID:15720390 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 NCBI chr 5:151,173,486...151,185,748
Ensembl chr 5:151,173,044...151,185,376 		JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W involved_in IEA
IDA
IBA 		GO_REF:0000041
PMID:14517336
GO_REF:0000002
GO_REF:0000043
GO_REF:0000033 		UniProt
InterPro
GO_Central		 PMID:14517336 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043, RGD:1299613 NCBI chr10:70,246,904...70,248,412
Ensembl chr10:70,243,810...70,250,329 		JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis, class X involved_in IEA
IDA 		GO_REF:0000041
GO_REF:0000043
PMID:15635094
GO_REF:0000002 		UniProt
InterPro		 PMID:15635094 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043, RGD:597976622 NCBI chr11:82,192,125...82,208,062
Ensembl chr11:82,192,092...82,208,061 		JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis, class Y acts_upstream_of_or_within ISO (PMID:16162815) RGD PMID:16162815 NCBI chr 8:28,965,634...28,967,876
Ensembl chr 8:28,965,617...28,968,508 		JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z involved_in ISO UniProtKB:Q04174 (PMID:15208306) RGD PMID:15208306 NCBI chr11:82,336,821...82,357,743
Ensembl chr11:82,336,823...82,340,684 		JBrowse link
G Slc30a5 solute carrier family 30 member 5 acts_upstream_of_positive_effect ISO
IEA 		(PMID:35525268)
GO_REF:0000107 		RGD
Ensembl		 PMID:35525268 GO_REF:0000107 NCBI chr 2:33,679,800...33,710,025
Ensembl chr 2:33,679,800...33,712,596 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO
IEA
ISS 		(PMID:9792633)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:9792633 GO_REF:0000024 GO_REF:0000107 NCBI chr11:75,501,358...75,527,291
Ensembl chr11:75,501,366...75,527,177 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO
IEA 		(PMID:10320813)
GO_REF:0000107 		RGD
Ensembl		 PMID:10320813 GO_REF:0000107 NCBI chr18:12,233,350...12,290,204
Ensembl chr18:12,233,351...12,290,204 		JBrowse link
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of_or_within ISO (PMID:25691431) RGD PMID:25691431 NCBI chr 9:55,735,081...55,745,287
Ensembl chr 9:55,735,097...55,745,340 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 acts_upstream_of_or_within ISO
IEA 		(PMID:25691431)
GO_REF:0000107 		RGD
Ensembl		 PMID:25691431 GO_REF:0000107 NCBI chr 7:1,832,368...1,835,501
Ensembl chr 7:1,832,368...1,836,223 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within ISO (PMID:25691431) RGD PMID:25691431 NCBI chr10:84,086,317...84,092,673
Ensembl chr10:84,086,317...84,093,548 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:16118219)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:16118219 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,257,413...102,263,086
Ensembl chr10:102,258,975...102,263,082 		JBrowse link
negative regulation of sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO
IEA
IMP 		(PMID:24201375)
GO_REF:0000107 		RGD
Ensembl		 PMID:24201375 PMID:24201375 GO_REF:0000107, RGD:14697729 NCBI chr 3:28,642,660...28,662,689
Ensembl chr 3:28,642,758...28,662,681 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2176073|MGI:3587769 (PMID:25332431) RGD PMID:25332431 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:149,391,390...149,598,319 		JBrowse link
omega-hydroxyceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpla1 patatin-like phospholipase domain containing 1 involved_in ISO
IEA 		(PMID:28248318)
(PMID:28248300)
GO_REF:0000117 		RGD
UniProt		 PMID:28248300 PMID:28248318 GO_REF:0000117 NCBI chr20:6,919,689...6,953,850
Ensembl chr20:6,919,115...6,955,143 		JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in ISO
IEA
IBA 		(PMID:11356846), (PMID:20068046)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:11356846 PMID:20068046 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:161,915,397...162,017,802
Ensembl chr 1:161,915,397...162,017,912 		JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (PMID:19364818) RGD PMID:19364818 NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:237,222,432...237,225,883 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21177474) 		UniProt
RGD		 PMID:21177474 GO_REF:0000024 NCBI chr10:104,740,763...104,745,760
Ensembl chr10:104,740,763...104,745,760 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:18936091 GO_REF:0000033, RGD:6482750 NCBI chr 7:112,731,803...112,771,978
Ensembl chr 7:112,731,803...112,771,609 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA 		(PMID:19279011)
GO_REF:0000107 		RGD
Ensembl		 PMID:19279011 GO_REF:0000107 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,775,681...5,805,839 		JBrowse link
G Sirt3 sirtuin 3 involved_in ISO (PMID:26620563) RGD PMID:26620563 NCBI chr 1:205,371,703...205,394,145
Ensembl chr 1:205,371,710...205,394,076 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IMP RGD PMID:20096352 RGD:10041064 NCBI chr19:51,072,209...51,155,639
Ensembl chr19:51,072,209...51,085,936 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO
IEA 		(PMID:16118219)
GO_REF:0000107 		RGD
Ensembl		 PMID:16118219 GO_REF:0000107 NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:105,317,333...105,321,637 		JBrowse link
G Znf750 zinc finger protein 750 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:107,270,926...107,279,904
Ensembl chr10:107,270,763...107,279,300 		JBrowse link
regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 9:55,735,081...55,745,287
Ensembl chr 9:55,735,097...55,745,340 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA GO_REF:0000117
GO_REF:0000104 		UniProt GO_REF:0000104 GO_REF:0000117 NCBI chr 7:1,832,368...1,835,501
Ensembl chr 7:1,832,368...1,836,223 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IEA GO_REF:0000117
GO_REF:0000104 		UniProt GO_REF:0000104 GO_REF:0000117 NCBI chr10:84,086,317...84,092,673
Ensembl chr10:84,086,317...84,093,548 		JBrowse link
G Paqr4 progestin and adipoQ receptor family member 4 involved_in ISO
IEA 		(PMID:32291319), (PMID:38961186)
GO_REF:0000107 		RGD
Ensembl		 PMID:32291319 PMID:38961186 GO_REF:0000107 NCBI chr10:13,263,559...13,267,237
Ensembl chr10:13,263,559...13,267,173 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA
ISS 		(PMID:17303575)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:17303575 GO_REF:0000024 GO_REF:0000107 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,775,681...5,805,839 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in ISO (PMID:19506037) RGD PMID:19506037 NCBI chr15:2,561,435...2,611,702
Ensembl chr15:2,561,435...2,607,052 		JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:3815115 (PMID:19416652) 		Ensembl
RGD		 PMID:19416652 GO_REF:0000107 NCBI chr17:12,029,189...12,068,234
Ensembl chr17:12,029,189...12,068,234 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:9363775) 		Ensembl
RGD		 PMID:9363775 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:112,679,623...112,762,640 		JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO
IEA 		(PMID:10751414), (PMID:19729656)
GO_REF:0000107 		RGD
Ensembl		 PMID:10751414 PMID:19729656 GO_REF:0000107 NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:105,317,333...105,321,637 		JBrowse link
sphingoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 acts_upstream_of_or_within ISO
IEA 		(PMID:19648650)
GO_REF:0000107 		RGD
Ensembl		 PMID:19648650 GO_REF:0000107 NCBI chr 3:147,301,570...147,431,696
Ensembl chr 3:147,301,801...147,434,044 		JBrowse link
sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in ISO (PMID:17713573) RGD PMID:17713573 NCBI chr 9:1,881,361...1,911,439
Ensembl chr 9:1,881,361...1,919,416 		JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr11:94,645,480...94,657,584
Ensembl chr11:94,645,480...94,660,514 		JBrowse link
G Cerkl CERK like autophagy regulator acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:5461515 (PMID:23501591) 		Ensembl
RGD		 PMID:23501591 GO_REF:0000107 NCBI chr 3:84,641,121...84,747,999
Ensembl chr 3:84,645,696...84,747,688 		JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:12105227) RGD PMID:12105227 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480 		JBrowse link
G Cers2 ceramide synthase 2 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:15823095) 		Ensembl
RGD		 PMID:15823095 GO_REF:0000107 NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:185,579,119...185,588,839 		JBrowse link
G Cers3 ceramide synthase 3 acts_upstream_of_or_within ISO (PMID:16753040) RGD PMID:16753040 NCBI chr 1:129,728,136...129,833,182
Ensembl chr 1:129,677,781...129,833,181 		JBrowse link
G Cers4 ceramide synthase 4 acts_upstream_of_or_within ISO (PMID:15823095) RGD PMID:15823095 NCBI chr12:7,649,610...7,688,066
Ensembl chr12:7,649,610...7,688,070 		JBrowse link
G Cers5 ceramide synthase 5 acts_upstream_of_or_within ISO (PMID:15823095) RGD PMID:15823095 NCBI chr 7:132,738,834...132,776,920
Ensembl chr 7:132,738,834...132,776,786 		JBrowse link
G Cers6 ceramide synthase 6 acts_upstream_of_or_within ISO (PMID:15823095) RGD PMID:15823095 NCBI chr 3:74,038,520...74,287,544
Ensembl chr 3:74,038,851...74,287,544 		JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:96,478,645...96,485,302
Ensembl chr13:96,478,646...96,485,302 		JBrowse link
G Degs1l2 delta(4)-desaturase, sphingolipid 1 like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:95,363,287...95,371,000
Ensembl chr13:95,363,345...95,370,993 		JBrowse link
G Degs2 delta(4)-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		GO_REF:0000041
SGD:S000002705 (PMID:11937514)
GO_REF:0000002
GO_REF:0000107 		UniProt
RGD
InterPro
Ensembl		 PMID:11937514 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr 6:133,360,449...133,377,677
Ensembl chr 6:133,360,457...133,364,422 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO
IEA
IBA 		(PMID:20937905)
(PMID:20253178)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:20253178 PMID:20937905 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:137,246,781...137,251,351
Ensembl chr 5:137,246,849...137,251,352 		JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:23,750,350...23,790,601
Ensembl chr17:23,750,350...23,790,601 		JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:254,938,731...254,942,559
Ensembl chr 1:254,938,731...254,942,559 		JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:93,582,930...93,609,479
Ensembl chr 8:93,582,930...93,609,678 		JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:87,671,164...87,737,618
Ensembl chr 8:87,671,159...87,737,616 		JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:220,738,095...220,845,528
Ensembl chr 2:220,738,064...220,845,549 		JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:41,522,695...41,592,021
Ensembl chr 2:41,522,738...41,592,020 		JBrowse link
G Gdf1 growth differentiation factor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480 		JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO UniProtKB:P40857 (PMID:18554506) RGD PMID:18554506 NCBI chr17:81,992,284...82,014,676
Ensembl chr17:81,992,292...82,014,592 		JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in ISO
IEA
IBA 		UniProtKB:P40857 (PMID:18554506)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:18554506 GO_REF:0000033 GO_REF:0000107 NCBI chr11:79,175,470...79,268,975
Ensembl chr11:79,175,482...79,268,126 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:74,396,441...74,433,700
Ensembl chr 8:74,396,442...74,433,700 		JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:107,935,514...107,961,271
Ensembl chr 5:107,934,937...107,962,836 		JBrowse link
G Kdsr 3-ketodihydrosphingosine reductase involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:19141869)
SGD:S000000469 (PMID:15328338)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000117
GO_REF:0000033 		RGD
InterPro
Ensembl
UniProt
GO_Central		 PMID:15328338 PMID:19141869 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr13:23,374,101...23,408,779
Ensembl chr13:23,376,779...23,408,897 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:1,832,368...1,835,501
Ensembl chr 7:1,832,368...1,836,223 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,086,317...84,092,673
Ensembl chr10:84,086,317...84,093,548 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) RGD PMID:25332431 NCBI chr17:12,029,189...12,068,234
Ensembl chr17:12,029,189...12,068,234 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
(PMID:28698261)
GO_REF:0000107
(PMID:25332431)
(PMID:26573920) 		UniProt
RGD
Ensembl		 PMID:25332431 PMID:26573920 PMID:28698261 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:112,679,623...112,762,640 		JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B acts_upstream_of_or_within ISO MGI:5689843 (PMID:26438849) RGD PMID:26438849 NCBI chr 2:156,432,509...156,461,936
Ensembl chr 2:156,432,512...156,460,909 		JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:23560799) RGD PMID:23560799 NCBI chr10:95,416,984...95,490,647
Ensembl chr10:95,416,205...95,490,452 		JBrowse link
G Cert1 ceramide transporter 1 involved_in ISO (PMID:39106189) RGD PMID:39106189 NCBI chr 2:29,617,202...29,721,734
Ensembl chr 2:29,617,023...29,721,729 		JBrowse link
G Osbp oxysterol binding protein involved_in ISO
IEA 		(PMID:12023275)
GO_REF:0000107 		RGD
Ensembl		 PMID:12023275 GO_REF:0000107 NCBI chr 1:218,313,455...218,343,263
Ensembl chr 1:218,313,148...218,343,258 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (PMID:25667419) RGD PMID:25667419 NCBI chr10:45,275,434...45,349,651
Ensembl chr10:45,275,412...45,420,037 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in ISO
IEA
IBA
ISS 		(PMID:14685263), (PMID:14976195), (PMID:17982138)
(PMID:27892528)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024 		RGD
Ensembl
GO_Central
HGNC-UCL		 PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:239,409,991...239,505,774 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:14685263), (PMID:17982138)
(PMID:25667419)
(PMID:27892528)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:222,567,661...222,641,804
Ensembl chr 2:222,567,664...222,590,807 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		GO_REF:0000107
MGI:3815115 (PMID:16216550)
(PMID:26301690)
GO_REF:0000117 		Ensembl
RGD
UniProt		 PMID:16216550 PMID:26301690 GO_REF:0000107 GO_REF:0000117 NCBI chr17:12,029,189...12,068,234
Ensembl chr17:12,029,189...12,068,234 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:3815117 (PMID:16216550) 		Ensembl
RGD		 PMID:16216550 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:112,679,623...112,762,640 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:12023275) RGD PMID:12023275 NCBI chr 9:112,624,791...112,654,731
Ensembl chr 9:112,624,794...112,654,731 		JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect ISO
IEA 		(PMID:26510981)
GO_REF:0000107 		RGD
Ensembl		 PMID:26510981 GO_REF:0000107 NCBI chr 3:28,642,660...28,662,689
Ensembl chr 3:28,642,758...28,662,681 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in ISO
IEA
IBA 		(PMID:17713573), (PMID:20207939), (PMID:20628055)
(PMID:27126290), (PMID:29056331)
GO_REF:0000117
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:17713573 PMID:20207939 PMID:20628055 PMID:27126290 PMID:29056331 GO_REF:0000033 GO_REF:0000117 NCBI chr 9:1,881,361...1,911,439
Ensembl chr 9:1,881,361...1,919,416 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in ISO
IEA
IBA 		(PMID:16940153), (PMID:20089856), (PMID:20207939), (PMID:20628055)
(PMID:29401619)
GO_REF:0000117
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:16940153 PMID:20089856 PMID:20207939 PMID:20628055 PMID:29401619 GO_REF:0000033 GO_REF:0000117 NCBI chr 5:106,437,773...106,488,572
Ensembl chr 5:106,437,796...106,488,583 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in ISO
IEA 		(PMID:20068046), (PMID:20207939), (PMID:26792856)
(PMID:26474409)
GO_REF:0000107
GO_REF:0000117 		RGD
Ensembl
UniProt		 PMID:20068046 PMID:20207939 PMID:26474409 PMID:26792856 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:161,915,397...162,017,802
Ensembl chr 1:161,915,397...162,017,912 		JBrowse link
G Agk acylglycerol kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:70,081,550...70,160,642
Ensembl chr 4:70,081,035...70,160,709 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:9653654)
(PMID:10610716), (PMID:12815059)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:9653654 PMID:10610716 PMID:12815059 GO_REF:0000024 GO_REF:0000107 NCBI chr16:57,669,927...57,701,349
Ensembl chr16:57,669,750...57,718,305 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IDA
ISO
IEA
IBA 		PMID:10488143
(PMID:10652340), (PMID:16126722), (PMID:16380386)
GO_REF:0000117
GO_REF:0000033
PMID:15123644
PMID:15217782
(PMID:30154232) 		RGD
UniProt
GO_Central		 PMID:10652340 PMID:16126722 PMID:16380386 PMID:30154232 PMID:10488143 More... GO_REF:0000033 GO_REF:0000117, RGD:13838800, RGD:13838793, RGD:13838794 NCBI chr 1:239,278,994...239,386,598
Ensembl chr 1:239,278,994...239,382,024 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO
IEA 		(PMID:19279011)
GO_REF:0000107 		RGD
Ensembl		 PMID:19279011 GO_REF:0000107 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:176,907,154...176,916,985 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO
IBA
IEA 		UniProtKB:Q9NRA0 (PMID:23106337)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:23106337 GO_REF:0000033 GO_REF:0000107 NCBI chr10:102,257,413...102,263,086
Ensembl chr10:102,258,975...102,263,082 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO
IEA 		UniProtKB:Q9NYA1 (PMID:23106337)
GO_REF:0000107 		RGD
Ensembl		 PMID:23106337 GO_REF:0000107 NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:105,317,333...105,321,637 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:19416851), (PMID:33558761)
MGI:3815115 (PMID:16216550)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:16216550 PMID:19416851 PMID:33558761 GO_REF:0000033 GO_REF:0000107 NCBI chr17:12,029,189...12,068,234
Ensembl chr17:12,029,189...12,068,234 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:19416851), (PMID:33558761)
MGI:3815117 (PMID:16216550)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:16216550 PMID:19416851 PMID:33558761 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:112,679,623...112,762,640 		JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 involved_in ISO
IEA
IBA 		(PMID:19416851)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:19416851 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:147,301,570...147,431,696
Ensembl chr 3:147,301,801...147,434,044 		JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A involved_in ISO
IEA 		(PMID:19416851), (PMID:33558761)
GO_REF:0000107 		RGD
Ensembl		 PMID:19416851 PMID:33558761 GO_REF:0000107 NCBI chr 6:77,879,931...77,891,344
Ensembl chr 6:77,879,941...77,891,403 		JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B involved_in ISO (PMID:19416851) RGD PMID:19416851 NCBI chr 2:156,432,509...156,461,936
Ensembl chr 2:156,432,512...156,460,909 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    cellular process 18484
      metabolic process 11533
        biosynthetic process 8271
          lipid biosynthetic process 748
            membrane lipid biosynthetic process 147
              glycolipid biosynthetic process + 75
              sphingolipid biosynthetic process + 104
Path 2
Term Annotations click to browse term
  biological_process 19315
    cellular process 18484
      metabolic process 11533
        primary metabolic process 10162
          lipid metabolic process 1489
            membrane lipid metabolic process 217
              membrane lipid biosynthetic process 147
                glycolipid biosynthetic process + 75
                sphingolipid biosynthetic process + 104
paths to the root