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ONTOLOGY REPORT - ANNOTATIONS

Term:carboxylic acid catabolic process
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Accession:GO:0046395 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups.
Synonyms:exact_synonym: carboxylic acid breakdown;   carboxylic acid catabolism;   carboxylic acid degradation


show annotations for term's descendants           Sort by:
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad8 acyl-CoA dehydrogenase family, member 8 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 8:25,382,271...25,406,404
Ensembl chr 8:25,382,273...25,406,414 		JBrowse link
G Acad9 acyl-CoA dehydrogenase family, member 9 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:120,871,329...120,894,306
Ensembl chr 2:118,943,174...118,966,547 		JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr12:47,154,259...47,163,580
Ensembl chr12:41,493,626...41,502,898 		JBrowse link
G Acadsb acyl-CoA dehydrogenase, short/branched chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:195,619,088...195,660,564
Ensembl chr 1:186,188,987...186,230,379 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:40,168,038...40,174,536
Ensembl chr19:23,263,264...23,269,681 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
G Naalad2 N-acetylated alpha-linked acidic dipeptidase 2 involved_in ISO
IEA		 (PMID:21908619)
GO_REF:0000107		 RGD
Ensembl		 PMID:21908619 GO_REF:0000107 NCBI chr 8:23,682,499...23,756,066
Ensembl chr 8:15,407,043...15,479,714 		JBrowse link
G Pon1 paraoxonase 1 involved_in ISO
IEA		 (PMID:7638166)
GO_REF:0000107		 RGD
Ensembl		 PMID:7638166 GO_REF:0000107 NCBI chr 4:34,261,312...34,292,327
Ensembl chr 4:33,294,722...33,321,360 		JBrowse link
G Pon3 paraoxonase 3 involved_in ISO
IEA		 (PMID:15772423)
GO_REF:0000107		 RGD
Ensembl		 PMID:15772423 GO_REF:0000107 NCBI chr 4:34,323,546...34,350,244
Ensembl chr 4:33,349,168...33,383,855 		JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect ISO
IEA		 (PMID:19933275), (PMID:21238436)
GO_REF:0000107		 RGD
Ensembl		 PMID:19933275 PMID:21238436 GO_REF:0000107 NCBI chr 8:9,731,592...9,748,934
Ensembl chr 8:1,452,282...1,463,966 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in ISO
IEA
IMP
IDA		 (PMID:19933275)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
(PMID:31624291)
GO_REF:0000117
PMID:10585460
PMID:1848231		 RGD
Ensembl
InterPro
UniProt		 PMID:19933275 PMID:31624291 PMID:10585460 PMID:1848231 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117, RGD:150521656, RGD:632027 NCBI chr 4:124,617,182...124,663,674
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in ISO
IEA		 (PMID:21238436)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000002
GO_REF:0000104
(PMID:33168096)		 RGD
Ensembl
UniProt
InterPro		 PMID:21238436 PMID:33168096 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:22,141,872...22,193,403
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phyh phytanoyl-CoA 2-hydroxylase IDA RGD PMID:10588950 RGD:727286 NCBI chr17:78,238,747...78,255,645
Ensembl chr17:73,329,082...73,346,409 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO
IEA		 (PMID:21998747)
GO_REF:0000107		 RGD
Ensembl		 PMID:21998747 GO_REF:0000107 NCBI chr 1:240,856,991...240,884,243
Ensembl chr 1:240,857,126...240,884,568 		JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO
IEA		 (PMID:24895913)
GO_REF:0000107		 RGD
Ensembl		 PMID:24895913 GO_REF:0000107 NCBI chr 2:237,327,812...237,460,624
Ensembl chr 2:234,667,491...234,799,339 		JBrowse link
G Fah fumarylacetoacetate hydrolase acts_upstream_of_or_within ISO
IEA		 MGI:2155424|MGI:2155425 (PMID:11209059)
GO_REF:0000107		 RGD
Ensembl		 PMID:11209059 GO_REF:0000107 NCBI chr 1:147,957,931...147,980,708
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IDA
IBA		 PMID:1383204
GO_REF:0000033		 GO_Central PMID:1383204 GO_REF:0000033, RGD:8553334 NCBI chr12:44,276,011...44,456,371
Ensembl chr12:38,626,714...38,710,945 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IBA		 (PMID:7504305)
(PMID:1383204)
GO_REF:0000033		 RGD
GO_Central		 PMID:1383204 PMID:7504305 GO_REF:0000033 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:63,815,308...63,851,210 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO
IBA
IEA		 (PMID:1378832), (PMID:7488039)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:1378832 PMID:7488039 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,777,973...196,797,754
Ensembl chr 1:187,347,865...187,367,682 		JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Arg2 arginase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:97,936,002...97,961,378 		JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,777,973...196,797,754
Ensembl chr 1:187,347,865...187,367,682 		JBrowse link
arginine deiminase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi3 peptidyl arginine deiminase 3 NAS RGD PMID:9192727 RGD:69926 NCBI chr 5:158,372,764...158,400,193
Ensembl chr 5:153,089,717...153,117,146 		JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tat tyrosine aminotransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:54,856,604...54,867,168
Ensembl chr19:37,947,112...37,958,031 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IDA		 (PMID:19839645)
GO_REF:0000033
PMID:12753071		 RGD
GO_Central		 PMID:19839645 PMID:12753071 PMID:12753071 GO_REF:0000033, RGD:1299508, RGD:1299508 NCBI chr 1:215,436,180...215,456,188
Ensembl chr 1:206,006,109...206,027,108 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:9163533) RGD PMID:9163533 NCBI chr20:45,673,486...45,693,056
Ensembl chr20:44,090,914...44,133,095 		JBrowse link
G ENSRNOG00000064101 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 3:9,679,203...9,680,482 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO
IEA		 (PMID:2241899)
GO_REF:0000107		 RGD
Ensembl		 PMID:2241899 GO_REF:0000107 NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in ISO
IBA		 (PMID:2567216)
GO_REF:0000033		 RGD
GO_Central		 PMID:2567216 GO_REF:0000033 NCBI chr19:9,180,428...9,206,113
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
G Got2-ps6 glutamic-oxaloacetic transaminase 2, pseudogene 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,551,686...60,552,959
Ensembl chr  X:60,551,686...60,552,959 		JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 IDA RGD PMID:2768248 RGD:1599052 NCBI chr 6:109,809,092...109,829,725
Ensembl chr 6:104,077,979...104,098,656 		JBrowse link
bile acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:67,121,288...67,154,543
Ensembl chr 4:66,154,248...66,186,372 		JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:12,481,396...12,576,748
Ensembl chr17:12,329,524...12,424,896 		JBrowse link
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (PMID:14755340) RGD PMID:14755340 NCBI chr 4:177,964,834...178,046,573
Ensembl chr 4:177,964,834...178,046,597 		JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within IDA
IEA
ISO		 GO_REF:0000107
MGI:3028726 (PMID:14755340)		 Ensembl
RGD		 PMID:14755340 PMID:11733007 GO_REF:0000107, RGD:1582175 NCBI chr 1:105,175,157...105,196,474
Ensembl chr 1:96,042,625...96,060,007 		JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in TAS
IBA
ISO
ISS		 GO_REF:0000033
(PMID:10745006), (PMID:3593587), (PMID:7883996), (PMID:9582350)
GO_REF:0000024		 GO_Central
RGD
UniProt		 PMID:3593587 PMID:7883996 PMID:9582350 PMID:10745006 PMID:2822716 GO_REF:0000024 GO_REF:0000033, RGD:631719 NCBI chr 1:90,266,731...90,295,521
Ensembl chr 1:81,138,947...81,167,862 		JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:10745006), (PMID:2022752), (PMID:3593587)		 HGNC-UCL
GO_Central
RGD		 PMID:2022752 PMID:3593587 PMID:10745006 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:93,725,277...93,907,799
Ensembl chr 8:84,845,264...85,027,812 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in TAS
IDA		 PMID:1377677 RGD
HGNC-UCL		 PMID:11562470 PMID:1377677 RGD:68918, RGD:68712 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Dbt dihydrolipoamide branched chain transacylase E2 involved_in ISO
IEA		 (PMID:3593587)
GO_REF:0000107		 RGD
Ensembl		 PMID:3593587 GO_REF:0000107 NCBI chr 2:207,166,660...207,195,528
Ensembl chr 2:204,481,737...204,510,609 		JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in ISO
IEA		 (PMID:3593587)
GO_REF:0000107		 RGD
Ensembl		 PMID:3593587 GO_REF:0000107 NCBI chr 6:53,631,686...53,655,059
Ensembl chr 6:47,903,914...47,924,795 		JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:82,979,759...83,077,819
Ensembl chr 4:81,649,175...81,780,617 		JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:56,082,082...56,161,796
Ensembl chr 9:48,590,099...48,669,824 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) RGD PMID:7640268 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
G Ppm1k protein phosphatase, Mg2+/Mn2+ dependent, 1K involved_in ISO (PMID:29779826) RGD PMID:29779826 NCBI chr 4:87,612,198...87,638,993
Ensembl chr 4:87,612,204...87,636,152 		JBrowse link
G Slc25a44 solute carrier family 25, member 44 involved_in ISO
IEA		 (PMID:31435015)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:31435015 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:176,166,136...176,180,965
Ensembl chr 2:173,868,320...173,883,020 		JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:3968063 GO_REF:0000033, RGD:2317678 NCBI chr12:47,154,259...47,163,580
Ensembl chr12:41,493,626...41,502,898 		JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29378847)		 UniProt
Ensembl
RGD		 PMID:29378847 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:97,351,373...97,362,969
Ensembl chr 1:88,214,480...88,226,207 		JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (PMID:18799520), (PMID:29378847) RGD PMID:18799520 PMID:29378847 NCBI chr19:59,034,808...59,049,148
Ensembl chr19:42,125,711...42,151,081 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in ISO (PMID:31004344) RGD PMID:31004344 NCBI chr 1:210,723,209...210,724,717
Ensembl chr 1:201,292,619...201,295,224 		JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA
IBA		 (PMID:16616139), (PMID:20603179)
GO_REF:0000107
(PMID:20603179)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16616139 PMID:20603179 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA		 (PMID:29274788)
GO_REF:0000107
(PMID:16751595), (PMID:2572224)		 RGD
Ensembl		 PMID:2572224 PMID:16751595 PMID:29274788 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Ddo D-aspartate oxidase involved_in IDA
IEA
ISO
IBA		 PMID:25747990
GO_REF:0000107
(PMID:20603179), (PMID:25747990), (PMID:26058797), (PMID:32553892), (PMID:37189369)
GO_REF:0000033
GO_REF:0000117
(PMID:16751595), (PMID:17234685)
(PMID:20603179), (PMID:25747990), (PMID:28629864)
(PMID:33650155)
PMID:29292239		 Ensembl
RGD
GO_Central
UniProt		 PMID:16751595 PMID:17234685 PMID:20603179 PMID:25747990 PMID:26058797 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:401901226, RGD:401901239 NCBI chr20:45,673,486...45,693,056
Ensembl chr20:44,090,914...44,133,095 		JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within		 IMP
IEA
ISO		 PMID:22820017
GO_REF:0000107
(PMID:15769935)		 Ensembl
RGD		 PMID:15769935 PMID:22820017 GO_REF:0000107, RGD:13825440 NCBI chr 5:135,329,605...135,367,037
Ensembl chr 5:130,092,732...130,113,674 		JBrowse link
D-glucuronate catabolic process to D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in ISO
IEA		 (PMID:38160)
GO_REF:0000107		 RGD
Ensembl		 PMID:38160 GO_REF:0000107 NCBI chr 5:135,329,605...135,367,037
Ensembl chr 5:130,092,732...130,113,674 		JBrowse link
G Cryl1 crystallin, lambda 1 involved_in ISO (PMID:38160) RGD PMID:38160 NCBI chr15:35,542,628...35,661,563
Ensembl chr15:31,427,054...31,545,997 		JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase involved_in ISO (PMID:11882650) RGD PMID:11882650 NCBI chr10:106,504,730...106,506,619 JBrowse link
G Sord sorbitol dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:38160)		 Ensembl
RGD		 PMID:38160 GO_REF:0000107 NCBI chr 3:129,638,282...129,669,727
Ensembl chr 3:109,184,676...109,216,133 		JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA
IBA		 (PMID:18544534)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18544534 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO
IEA		 (PMID:16141203)
GO_REF:0000107		 RGD
Ensembl		 PMID:16141203 GO_REF:0000107 NCBI chr 6:109,399,032...109,405,138
Ensembl chr 6:103,668,753...103,673,917 		JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16141203)		 Ensembl
RGD		 PMID:16141203 GO_REF:0000107 NCBI chr 3:173,950,530...173,962,188
Ensembl chr 3:153,531,193...153,542,851 		JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 involved_in IDA
ISO
IBA
IEA		 PMID:10468558
(PMID:28629946)
GO_REF:0000033
GO_REF:0000107
(PMID:10468558), (PMID:15644336), (PMID:21708296), (PMID:28289220)		 RGD
GO_Central
Ensembl		 PMID:10468558 PMID:15644336 PMID:21708296 PMID:28289220 PMID:28629946 More... GO_REF:0000033 GO_REF:0000107, RGD:708588 NCBI chr16:6,831,293...6,869,410
Ensembl chr16:6,824,906...6,863,027 		JBrowse link
G Hao1 hydroxyacid oxidase 1 involved_in ISO
IEA		 (PMID:18215067)
GO_REF:0000107		 RGD
Ensembl		 PMID:18215067 GO_REF:0000107 NCBI chr 3:142,102,873...142,281,527
Ensembl chr 3:121,771,836...121,828,721 		JBrowse link
G Ilvbl ilvB acetolactate synthase like involved_in ISO
IEA		 (PMID:28289220)
GO_REF:0000107		 RGD
Ensembl		 PMID:28289220 GO_REF:0000107 NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924 		JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO
IEA		 MGI:2384515 (PMID:12897163)
GO_REF:0000107		 RGD
Ensembl		 PMID:12897163 GO_REF:0000107 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262 		JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase acts_upstream_of_or_within
involved_in		 IDA
IEA
ISO
IBA		 GO_REF:0000107
GO_REF:0000002
(PMID:12915479), (PMID:9326939)
GO_REF:0000033
(PMID:16186124), (PMID:9326939)		 Ensembl
InterPro
RGD
GO_Central		 PMID:9326939 PMID:12915479 PMID:16186124 PMID:10588950 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:727286 NCBI chr17:78,238,747...78,255,645
Ensembl chr17:73,329,082...73,346,409 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10198260)		 Ensembl
RGD		 PMID:10198260 GO_REF:0000107 NCBI chr 3:134,258,101...134,295,581
Ensembl chr 3:113,804,728...113,842,208 		JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:10196381)
UniProtKB:P34230|UniProtKB:P41909 (PMID:17542813), (PMID:18757502), (PMID:21145416), (PMID:23671276), (PMID:9425230)		 UniProt
GO_Central
RGD		 PMID:9425230 PMID:10196381 PMID:17542813 PMID:18757502 PMID:21145416 More... GO_REF:0000024 GO_REF:0000033 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO
IEA
IBA		 UniProtKB:P41909 (PMID:21145416)
GO_REF:0000107
GO_REF:0000033
(PMID:10196381)		 RGD
Ensembl
GO_Central		 PMID:10196381 PMID:21145416 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
IEA
IBA		 UniProtKB:P33897 (PMID:24333844), (PMID:9425230)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9425230 PMID:24333844 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:212,536,791...212,590,379
Ensembl chr 2:209,852,087...209,906,020 		JBrowse link
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IDA
IBA
IGI
ISO		 PMID:9325339
GO_REF:0000033
PMID:2882519
(PMID:2365812), (PMID:2882519)		 GO_Central
RGD		 PMID:2365812 PMID:2882519 PMID:9325339 PMID:2882519 GO_REF:0000033, RGD:21201257, RGD:8554082 NCBI chr 8:127,956,126...127,966,348
Ensembl chr 8:119,079,775...119,088,624 		JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:127,750,771...127,759,589
Ensembl chr 8:118,872,997...118,881,825 		JBrowse link
G Acaa2 acetyl-CoA acyltransferase 2 involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:11879205 GO_REF:0000033 GO_REF:0000041, RGD:2317624 NCBI chr18:70,620,310...70,648,417
Ensembl chr18:68,345,012...68,373,249 		JBrowse link
G Acad11 acyl-CoA dehydrogenase family, member 11 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:113,560,142...113,625,346
Ensembl chr 8:104,681,396...104,746,560 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in TAS
IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000002
GO_REF:0000024
(PMID:2393404)		 Ensembl
InterPro
UniProt
RGD		 PMID:2393404 PMID:15358373 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:1358266 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Acadsb acyl-CoA dehydrogenase, short/branched chain TAS RGD PMID:12855692 RGD:1358267 NCBI chr 1:195,619,088...195,660,564
Ensembl chr 1:186,188,987...186,230,379 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain IDA RGD PMID:8034667 RGD:631729 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in IEA GO_REF:0000002
GO_REF:0000117		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000117 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in IDA
IEA		 GO_REF:0000002
GO_REF:0000117		 InterPro
UniProt
RGD		 PMID:1400324 PMID:8654595 GO_REF:0000002 GO_REF:0000117, RGD:2299949, RGD:2299971 NCBI chr15:19,090,820...19,122,392
Ensembl chr15:16,660,272...16,692,160 		JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl involved_in IEA GO_REF:0000117
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chr14:79,358,604...79,405,160
Ensembl chr14:75,094,676...75,176,205 		JBrowse link
G Acoxl acyl-CoA oxidase-like involved_in IEA GO_REF:0000117
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chr 3:135,514,340...135,820,291
Ensembl chr 3:115,061,060...115,364,686 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2388007 (PMID:12151381)		 UniProt
RGD		 PMID:12151381 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 acts_upstream_of_or_within_positive_effect ISO
IEA		 (PMID:33168096)
GO_REF:0000107		 RGD
Ensembl		 PMID:33168096 GO_REF:0000107 NCBI chr 7:22,141,872...22,193,403
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:12,481,396...12,576,748
Ensembl chr17:12,329,524...12,424,896 		JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISO
IEA		 (PMID:16380372)
GO_REF:0000107		 RGD
Ensembl		 PMID:16380372 GO_REF:0000107 NCBI chr 2:226,376,346...226,397,010
Ensembl chr 2:223,702,412...223,723,072 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in IEP
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:31901136 PMID:31953200 GO_REF:0000041, RGD:25823178, RGD:25823179 NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Cpt1b carnitine palmitoyltransferase 1B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:122,370,974...122,380,473
Ensembl chr 7:120,491,354...120,500,404 		JBrowse link
G Cpt1c carnitine palmitoyltransferase 1c involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:104,579,297...104,593,824
Ensembl chr 1:95,442,817...95,457,342 		JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in TAS
IEA
IBA
ISS
ISO
IEP		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:20538056)
GO_REF:0000041		 Ensembl
GO_Central
UniProt
RGD		 PMID:20538056 PMID:16781677 PMID:10380116 PMID:10796071 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1600744, RGD:21410186, RGD:2326088 NCBI chr 5:127,893,450...127,911,347
Ensembl chr 5:122,664,677...122,682,095 		JBrowse link
G Crot carnitine O-octanoyltransferase involved_in IEA
ISO		 GO_REF:0000041
GO_REF:0000107
(PMID:21619872)		 UniProt
Ensembl
RGD		 PMID:21619872 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:26,031,729...26,088,057
Ensembl chr 4:25,080,587...25,133,109 		JBrowse link
G Decr1 2,4-dienoyl-CoA reductase 1 involved_in IEA
IBA
ISS
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:15531764)		 Ensembl
GO_Central
UniProt
RGD		 PMID:15531764 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:34,208,195...34,236,074
Ensembl chr 5:29,411,172...29,439,018 		JBrowse link
G Ech1 enoyl-CoA hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:93,241,076...93,248,314
Ensembl chr 1:84,112,751...84,120,795 		JBrowse link
G Echdc1 ethylmalonyl-CoA decarboxylase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:28,476,354...28,507,173
Ensembl chr 1:28,476,200...28,507,319 		JBrowse link
G Echdc2 enoyl CoA hydratase domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:122,915,874...122,934,860
Ensembl chr 5:122,916,134...122,934,859 		JBrowse link
G Echs1 enoyl-CoA hydratase, short chain 1 involved_in TAS
IEA
IBA
ISO
ISS
IMP		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000041
(PMID:26251176)
GO_REF:0000024		 Ensembl
GO_Central
UniProt
RGD		 PMID:26251176 PMID:2806264 PMID:12379132 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:68828, RGD:2317616 NCBI chr 1:204,324,679...204,333,506
Ensembl chr 1:194,895,036...194,903,884 		JBrowse link
G Eci1 enoyl-CoA delta isomerase 1 acts_upstream_of_or_within
involved_in		 TAS
IEA
ISO
IBA
IDA		 GO_REF:0000107
MGI:2180887 (PMID:11916962)
GO_REF:0000033
PMID:11781327
GO_REF:0000041		 Ensembl
RGD
GO_Central
UniProt		 PMID:11916962 PMID:1958319 PMID:11781327 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:61567, RGD:2306199 NCBI chr10:13,961,250...13,974,595
Ensembl chr10:13,456,563...13,470,061 		JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:11781327 GO_REF:0000041, RGD:2306199 NCBI chr17:30,056,274...30,092,169
Ensembl chr17:29,870,391...29,886,781 		JBrowse link
G Ehhadh enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 PMID:12106015
GO_REF:0000107
GO_REF:0000117
MGI:1857810 (PMID:17442273)
GO_REF:0000033
PMID:11781327
GO_REF:0000041
(PMID:15060085)		 Ensembl
UniProt
RGD
GO_Central		 PMID:15060085 PMID:17442273 PMID:12106015 PMID:11781327 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117, RGD:21201263, RGD:2306199 NCBI chr11:92,746,409...92,779,647
Ensembl chr11:79,241,938...79,275,188 		JBrowse link
G Fabp3 fatty acid binding protein 3 NAS RGD PMID:3036869 RGD:728828 NCBI chr 5:147,936,027...147,942,870
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase involved_in IMP
IEA
IBA
ISS
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
GO_REF:0000041
(PMID:2817332)
(PMID:11489939)		 Ensembl
GO_Central
UniProt
RGD		 PMID:2817332 PMID:11489939 PMID:17491019 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:2302227 NCBI chr 2:222,462,049...222,504,446
Ensembl chr 2:219,787,927...219,830,353 		JBrowse link
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 GO_REF:0000002
GO_REF:0000117
(PMID:29915090), (PMID:31604922)
MGI:2137697 (PMID:11390422)
GO_REF:0000033
GO_REF:0000041		 InterPro
UniProt
RGD
GO_Central		 PMID:11390422 PMID:29915090 PMID:31604922 PMID:1730633 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000117, RGD:1600572 NCBI chr 6:31,907,801...31,947,434
Ensembl chr 6:26,187,956...26,227,869 		JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:29915090)
GO_REF:0000041		 GO_Central
Ensembl
RGD
UniProt		 PMID:29915090 PMID:1730633 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1600572 NCBI chr 6:31,873,404...31,907,557
Ensembl chr 6:26,153,578...26,184,869 		JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12917011)
GO_REF:0000041		 UniProt
Ensembl
RGD		 PMID:12917011 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:24,568,551...24,571,012
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 GO_REF:0000041
GO_REF:0000107
MGI:2385822 (PMID:17442273)
GO_REF:0000033
(PMID:10400999), (PMID:10706581), (PMID:15060085), (PMID:9482850)
GO_REF:0000024		 UniProt
Ensembl
RGD
GO_Central		 PMID:9482850 PMID:10400999 PMID:10706581 PMID:15060085 PMID:17442273 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr18:45,515,427...45,604,467
Ensembl chr18:43,328,824...43,417,952 		JBrowse link
G Lep leptin acts_upstream_of_or_within ISO
IEA		 MGI:2651874 (PMID:22958918)
GO_REF:0000107		 RGD
Ensembl		 PMID:22958918 GO_REF:0000107 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Mtln mitoregulin involved_in ISO (PMID:32243843) RGD PMID:32243843 NCBI chr 3:115,018,810...115,019,668
Ensembl chr 3:115,019,473...115,019,643
Ensembl chr 3:115,019,473...115,019,643 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO
IBA
IEA		 (PMID:10528859), (PMID:9765053)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:9765053 PMID:10528859 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:97,957,479...97,973,767
Ensembl chr 2:96,045,958...96,073,404 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:2154454|MGI:2176228|MGI:2384516 (PMID:17442273), (PMID:9288097)
GO_REF:0000107		 RGD
Ensembl		 PMID:9288097 PMID:17442273 GO_REF:0000107 NCBI chr 4:158,956,973...158,983,581
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within ISO
IEA		 MGI:3052739 (PMID:12915479)
GO_REF:0000107		 RGD
Ensembl		 PMID:12915479 GO_REF:0000107 NCBI chr 1:16,402,319...16,466,304
Ensembl chr 1:14,582,699...14,646,748 		JBrowse link
G Ppard peroxisome proliferator-activated receptor delta involved_in ISO
IEA		 (PMID:14676330)
GO_REF:0000107		 RGD
Ensembl		 PMID:14676330 GO_REF:0000107 NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,298,785...6,363,968 		JBrowse link
G Scp2 sterol carrier protein 2 involved_in IDA PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 5:128,035,714...128,110,015
Ensembl chr 5:122,776,549...122,881,287 		JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO
IEA		 MGI:104663 (PMID:22958918)
GO_REF:0000107		 RGD
Ensembl		 PMID:22958918 GO_REF:0000107 NCBI chr 5:149,986,304...150,005,255
Ensembl chr 5:144,701,530...144,721,260 		JBrowse link
G Slc25a17 solute carrier family 25 member 17 involved_in ISO
IEA		 UniProtKB:Q06497 (PMID:12445829)
GO_REF:0000107		 RGD
Ensembl		 PMID:12445829 GO_REF:0000107 NCBI chr 7:112,844,375...112,887,014
Ensembl chr 7:112,844,375...112,925,945 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO
IEA		 (PMID:10198260)
GO_REF:0000107		 RGD
Ensembl		 PMID:10198260 GO_REF:0000107 NCBI chr 3:134,258,101...134,295,581
Ensembl chr 3:113,804,728...113,842,208 		JBrowse link
G St13 ST13, Hsp70 interacting protein involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:114,769,758...114,805,877
Ensembl chr 7:112,844,375...112,925,945 		JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad11 acyl-CoA dehydrogenase family, member 11 involved_in ISO
IEA
IBA		 (PMID:21237683)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:21237683 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:113,560,142...113,625,346
Ensembl chr 8:104,681,396...104,746,560 		JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IDA
ISO
IBA		 (PMID:15639194), (PMID:9861014)
GO_REF:0000033		 RGD
GO_Central		 PMID:9861014 PMID:15639194 PMID:3968063 GO_REF:0000033, RGD:2317678 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IDA
ISO
IEA		 (PMID:18459129)
GO_REF:0000107
(PMID:16972171), (PMID:1902818), (PMID:19224950), (PMID:25416781), (PMID:3597357)		 RGD
Ensembl		 PMID:1902818 PMID:3597357 PMID:16972171 PMID:18459129 PMID:19224950 More... GO_REF:0000107, RGD:2317678 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:3597357)		 GO_Central
Ensembl
RGD		 PMID:3597357 PMID:3968063 GO_REF:0000033 GO_REF:0000107, RGD:2317678 NCBI chr12:47,154,259...47,163,580
Ensembl chr12:41,493,626...41,502,898 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in ISO
IEA
ISS		 (PMID:7668252), (PMID:9599005)
(PMID:15639194)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7668252 PMID:9599005 PMID:15639194 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Etfa electron transfer flavoprotein subunit alpha involved_in ISO
IBA
IEA
ISS		 (PMID:25416781)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:25416781 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:64,731,192...64,787,965
Ensembl chr 8:55,835,134...55,891,969 		JBrowse link
G Etfb electron transfer flavoprotein subunit beta involved_in ISO
IEA
IBA
ISS		 (PMID:25416781)
GO_REF:0000107
(PMID:25023281)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:25023281 PMID:25416781 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:102,988,499...103,002,663
Ensembl chr 1:93,851,858...93,866,068 		JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase involved_in ISO (PMID:17412732) RGD PMID:17412732 NCBI chr 2:167,038,707...167,060,758
Ensembl chr 2:164,729,749...164,762,745 		JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in ISO
IEA
IBA		 (PMID:25416781)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25416781 GO_REF:0000033 GO_REF:0000107 NCBI chr19:40,168,038...40,174,536
Ensembl chr19:23,263,264...23,269,681 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO
IC		 (PMID:3597357)
PMID:6401713		 RGD PMID:3597357 PMID:6401713 RGD:8554099 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:127,956,126...127,966,348
Ensembl chr 8:119,079,775...119,088,624 		JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IEA
ISO		 GO_REF:0000041
MGI:3617359 (PMID:15589695)		 UniProt
RGD		 PMID:15589695 GO_REF:0000041 NCBI chr 8:127,750,771...127,759,589
Ensembl chr 8:118,872,997...118,881,825 		JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000041
GO_REF:0000033
GO_REF:0000002
(PMID:18536048)		 Ensembl
UniProt
GO_Central
InterPro
RGD		 PMID:18536048 PMID:1400324 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:2299949 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO
IBA
IEA		 (PMID:27884763)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002		 RGD
GO_Central
Ensembl
InterPro		 PMID:27884763 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr15:19,090,820...19,122,392
Ensembl chr15:16,660,272...16,692,160 		JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000041		 GO_Central
InterPro
UniProt
RGD		 PMID:1400324 PMID:8654595 PMID:8026493 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041, RGD:2299949, RGD:2299971, RGD:2299969 NCBI chr14:79,358,604...79,405,160
Ensembl chr14:75,094,676...75,176,205 		JBrowse link
G Acoxl acyl-CoA oxidase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:135,514,340...135,820,291
Ensembl chr 3:115,061,060...115,364,686 		JBrowse link
G Crat carnitine O-acetyltransferase involved_in ISO
IEA
ISS		 (PMID:23485643)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23485643 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:34,073,504...34,087,099
Ensembl chr 3:13,675,684...13,689,255 		JBrowse link
G Ehhadh enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase involved_in ISO
IEA		 MGI:1857810 (PMID:34651140)
GO_REF:0000107		 RGD
Ensembl		 PMID:34651140 GO_REF:0000107 NCBI chr11:92,746,409...92,779,647
Ensembl chr11:79,241,938...79,275,188 		JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 involved_in ISO
IEA		 MGI:2385822 (PMID:16484321)
GO_REF:0000107		 RGD
Ensembl		 PMID:16484321 GO_REF:0000107 NCBI chr18:45,515,427...45,604,467
Ensembl chr18:43,328,824...43,417,952 		JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain acts_upstream_of_or_within ISO (PMID:21151927) RGD PMID:21151927 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain acts_upstream_of_or_within ISO
IEA		 MGI:3606688 (PMID:21151927)
GO_REF:0000107		 RGD
Ensembl		 PMID:21151927 GO_REF:0000107 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11834298)		 GO_Central
RGD		 PMID:11834298 GO_REF:0000033 NCBI chr 5:167,969,284...168,062,033
Ensembl chr 5:162,684,645...162,779,309 		JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,950,530...173,962,188
Ensembl chr 3:153,531,193...153,542,851 		JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in ISO
IEA		 (PMID:32169171)
GO_REF:0000107		 RGD
Ensembl		 PMID:32169171 GO_REF:0000107 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
G Decr2 2,4-dienoyl-CoA reductase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,609,389...15,617,779
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) RGD PMID:10419495 NCBI chr17:30,056,274...30,092,169
Ensembl chr17:29,870,391...29,886,781 		JBrowse link
G Faah fatty acid amide hydrolase involved_in IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
PMID:9122178
(PMID:9122178)
PMID:17649977		 Ensembl
GO_Central
RGD		 PMID:9122178 PMID:12734197 PMID:9122178 PMID:17649977 GO_REF:0000033 GO_REF:0000107, RGD:1625736, RGD:8554689, RGD:14397564 NCBI chr 5:134,716,545...134,735,396
Ensembl chr 5:129,479,824...129,498,677 		JBrowse link
G Lep leptin IDA RGD PMID:12058043 RGD:625499 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Lpin1 lipin 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:16950137)		 GO_Central
RGD		 PMID:16950137 GO_REF:0000033 NCBI chr 6:45,039,110...45,145,845
Ensembl chr 6:39,312,748...39,417,097 		JBrowse link
G Lpin2 lipin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:118,529,988...118,604,796
Ensembl chr 9:111,083,745...111,158,193 		JBrowse link
G Lpin3 lipin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:169,953,479...169,978,034
Ensembl chr 3:149,534,051...149,558,327 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,619,106...15,622,961
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Pcca propionyl-CoA carboxylase subunit alpha TAS RGD PMID:2745462 RGD:633579 NCBI chr15:106,034,586...106,374,908
Ensembl chr15:99,627,982...99,968,266 		JBrowse link
G Pccb propionyl-CoA carboxylase subunit beta TAS RGD PMID:3464942 RGD:633580 NCBI chr 8:101,591,218...101,641,213
Ensembl chr 8:101,590,737...101,641,234 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,507,151...15,591,173
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:98,609,410...98,681,901
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:52,362,384...52,382,647
Ensembl chr 5:47,566,072...47,586,212 		JBrowse link
gamma-aminobutyrate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8999827 GO_REF:0000033, RGD:1625237 NCBI chr17:89,671,718...89,734,246
Ensembl chr17:84,763,628...84,826,155 		JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO
IC
IBA		 (PMID:11561735)
GO_REF:0000111
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:11561735 GO_REF:0000033 GO_REF:0000111 NCBI chr10:7,503,351...7,599,474
Ensembl chr10:6,999,819...7,092,835 		JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA
TAS		 GO_REF:0000024
GO_REF:0000104
GO_REF:0000002
MGI:2180159 (PMID:11544478), (PMID:15262267)
GO_REF:0000033
PMID:7814412
(PMID:15037717), (PMID:9683595)
GO_REF:0000041		 UniProt
InterPro
RGD
GO_Central		 PMID:9683595 PMID:11544478 PMID:15037717 PMID:15262267 PMID:7814412 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104, RGD:632258 NCBI chr17:40,560,373...40,586,711
Ensembl chr17:40,130,883...40,158,677 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO
IEA		 (PMID:17384644)
GO_REF:0000107		 RGD
Ensembl		 PMID:17384644 GO_REF:0000107 NCBI chr 3:75,777,260...75,818,099
Ensembl chr 3:55,369,704...55,410,333 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO
IBA		 (PMID:11032875), (PMID:6121377)
GO_REF:0000033		 RGD
GO_Central		 PMID:6121377 PMID:11032875 GO_REF:0000033 NCBI chr16:9,646,569...9,680,215
Ensembl chr16:9,640,312...9,673,957 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,180,428...9,206,113
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:4193185)
GO_REF:0000107		 RGD
Ensembl		 PMID:4193185 GO_REF:0000107 NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,180,428...9,206,113
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
glutamate catabolic process via 2-hydroxyglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16435184)		 UniProt
RGD		 PMID:16435184 GO_REF:0000024 NCBI chr 5:14,488,784...14,515,405
Ensembl chr 5:9,705,970...9,732,517 		JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within		 TAS
ISO
IBA
IEA
ISS		 (PMID:22228304)
MGI:3514104 (PMID:16641247)
GO_REF:0000033
GO_REF:0000107
(PMID:22049910)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:16641247 PMID:22049910 PMID:22228304 PMID:1918000 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:728510 NCBI chr 9:56,836,584...56,908,861
Ensembl chr 9:49,344,781...49,416,900 		JBrowse link
G Gls2 glutaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:1,201,757...1,218,014
Ensembl chr 7:617,288...633,426 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:31,570,010...31,604,410
Ensembl chr14:31,216,165...31,250,144 		JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amt aminomethyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:108,981,620...108,988,127
Ensembl chr 8:108,976,472...108,988,126 		JBrowse link
G Gldc glycine decarboxylase involved_in ISO
IEA		 (PMID:28244183)
GO_REF:0000002		 RGD
InterPro		 PMID:28244183 GO_REF:0000002 NCBI chr 1:237,296,753...237,375,620
Ensembl chr 1:227,883,249...227,962,097 		JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07067762.1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 Ensembl chr 9:56,634,648...56,635,789 JBrowse link
G Amt aminomethyltransferase involved_in ISO
IEA		 (PMID:16051266)
GO_REF:0000107		 RGD
Ensembl		 PMID:16051266 GO_REF:0000107 NCBI chr 8:108,981,620...108,988,127
Ensembl chr 8:108,976,472...108,988,126 		JBrowse link
G ENSRNOG00000069283 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 Ensembl chr16:24,647,938...24,648,620 JBrowse link
G Gcsh glycine cleavage system protein H involved_in IMP
IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central
RGD		 PMID:6402507 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104, RGD:1598699 NCBI chr19:61,944,850...61,955,607
Ensembl chr19:45,036,011...45,046,792 		JBrowse link
G Gcshl1 glycine cleavage system protein H like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000104
GO_REF:0000002		 GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:260,311,346...260,312,097
Ensembl chr 1:260,311,343...260,311,843 		JBrowse link
G Gldc glycine decarboxylase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:6778858 GO_REF:0000033, RGD:1642728 NCBI chr 1:237,296,753...237,375,620
Ensembl chr 1:227,883,249...227,962,097 		JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO
IEA		 (PMID:18215067)
GO_REF:0000107		 RGD
Ensembl		 PMID:18215067 GO_REF:0000107 NCBI chr 3:142,102,873...142,281,527
Ensembl chr 3:121,771,836...121,828,721 		JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in ISO (PMID:22198249) RGD PMID:22198249 NCBI chr 9:101,122,793...101,132,746
Ensembl chr 9:93,675,384...93,685,336 		JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IEA
IBA		 (PMID:20018850)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20018850 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO
IEA
IBA		 (PMID:20797690)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20797690 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:240,856,991...240,884,243
Ensembl chr 1:240,857,126...240,884,568 		JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blmh bleomycin hydrolase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:62,270,170...62,313,349
Ensembl chr10:61,758,478...61,815,212 		JBrowse link
G Cbs cystathionine beta synthase involved_in ISO
IEA
ISS		 (PMID:18776696), (PMID:24416422)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18776696 PMID:24416422 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO (PMID:11466310) RGD PMID:11466310 NCBI chr 1:36,695,376...36,727,341
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
homogentisate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:147,957,931...147,980,708
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase, short/branched chain involved_in ISO
IEA
ISS		 (PMID:11013134)
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11013134 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 1:195,619,088...195,660,564
Ensembl chr 1:186,188,987...186,230,379 		JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO
IEA		 (PMID:1979337), (PMID:8103405)
GO_REF:0000107		 RGD
Ensembl		 PMID:1979337 PMID:8103405 GO_REF:0000107 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within IDA
IEA
ISO		 GO_REF:0000107
MGI:3772355 (PMID:17767905)		 Ensembl
RGD		 PMID:17767905 PMID:11733007 GO_REF:0000107, RGD:1582175 NCBI chr 1:105,175,157...105,196,474
Ensembl chr 1:96,042,625...96,060,007 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
IEA
ISS		 (PMID:18996107), (PMID:19706438)
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18996107 PMID:19706438 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:24,568,551...24,571,012
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873 PMID:18492492 PMID:22198249 NCBI chr 9:101,122,793...101,132,746
Ensembl chr 9:93,675,384...93,685,336 		JBrowse link
G Gpt glutamic--pyruvic transaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:110,295,599...110,300,134
Ensembl chr 7:108,416,642...108,419,494 		JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:37,700,023...37,734,551
Ensembl chr19:21,517,621...21,560,610 		JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IEA
IBA		 (PMID:20018850)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20018850 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in ISO (PMID:18492492) RGD PMID:18492492 NCBI chr 9:101,122,793...101,132,746
Ensembl chr 9:93,675,384...93,685,336 		JBrowse link
G Cbs cystathionine beta synthase involved_in ISO
IEA		 (PMID:15520012)
GO_REF:0000107		 RGD
Ensembl		 PMID:15520012 GO_REF:0000107 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Cdo1 cysteine dioxygenase type 1 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16611641 GO_REF:0000033, RGD:2301357 NCBI chr18:41,619,076...41,633,719
Ensembl chr18:39,432,474...39,447,296 		JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:135,187,175...135,216,495
Ensembl chr 7:133,308,574...133,337,615 		JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:135,187,175...135,216,495
Ensembl chr 7:133,308,574...133,337,615 		JBrowse link
L-histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:29,930,966...29,946,199
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Hal histidine ammonia lyase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:8486363)		 GO_Central
Ensembl
InterPro
RGD		 PMID:8486363 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:11478947)
GO_REF:0000033
(PMID:22767596)		 Ensembl
RGD
GO_Central		 PMID:11478947 PMID:22767596 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:134,300,628...134,318,704
Ensembl chr 3:113,847,260...113,865,341 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in ISO
IEA
IBA		 (PMID:19304569)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:19304569 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 7:29,930,966...29,946,199
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,054,710...12,068,219
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:29,930,966...29,946,199
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,054,710...12,068,219
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kyat1 kynurenine aminotransferase 1 involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:7796908 GO_REF:0000041, RGD:9685040 NCBI chr 3:33,857,407...33,891,153
Ensembl chr 3:13,459,591...13,493,355 		JBrowse link
G Kyat3 kynurenine aminotransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:234,362,306...234,407,646
Ensembl chr 2:231,701,963...231,747,227 		JBrowse link
G Kynu kynureninase involved_in IEA GO_REF:0000041
GO_REF:0000104		 UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:12,481,396...12,576,748
Ensembl chr17:12,329,524...12,424,896 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:153,461,738...153,475,552
Ensembl chr 5:148,178,252...148,192,068 		JBrowse link
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:76,757,301...76,887,300
Ensembl chr 8:76,757,497...76,886,816 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in IEA
IBA
IDA
ISO		 GO_REF:0000041
GO_REF:0000033
PMID:6401713
(PMID:7640268)		 UniProt
GO_Central
RGD		 PMID:7640268 PMID:6401713 GO_REF:0000033 GO_REF:0000041, RGD:8554099 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
G Mccc1 methylcrotonyl-CoA carboxylase subunit 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:120,727,313...120,779,334
Ensembl chr 2:118,799,150...118,851,222 		JBrowse link
G Mccc2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 2:33,039,044...33,110,092
Ensembl chr 2:31,304,932...31,375,972 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (PMID:10567240) RGD PMID:10567240 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO
IEA
IBA		 (PMID:10642506)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:10642506 GO_REF:0000033 GO_REF:0000107 NCBI chr10:62,769,874...62,783,484
Ensembl chr10:62,769,900...62,782,370 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:34,520,236...34,566,388
Ensembl chr16:29,509,394...29,544,332 		JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:110,489,576...110,512,841
Ensembl chr 6:104,758,631...104,783,296 		JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07068905.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:817,915...819,124 JBrowse link
G Fah fumarylacetoacetate hydrolase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000104
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:147,957,931...147,980,708
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 NCBI chr 6:112,525,576...112,536,228
Ensembl chr 6:106,794,074...106,805,284 		JBrowse link
G Hgd homogentisate 1, 2-dioxygenase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 NCBI chr11:76,592,202...76,643,776
Ensembl chr11:63,086,752...63,138,323 		JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase involved_in IEA GO_REF:0000041
GO_REF:0000043		 UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr12:39,042,246...39,053,596
Ensembl chr12:33,381,231...33,392,766 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) RGD PMID:17356132 PMID:25767141 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Pah phenylalanine hydroxylase involved_in IEA GO_REF:0000041
GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr 7:23,793,096...23,885,631
Ensembl chr 7:21,933,179...21,998,130 		JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:4155291 GO_REF:0000033, RGD:5128604 NCBI chr14:69,882,776...69,896,378
Ensembl chr14:65,670,131...65,683,854 		JBrowse link
G Tat tyrosine aminotransferase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 NCBI chr19:54,856,604...54,867,168
Ensembl chr19:37,947,112...37,958,031 		JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in ISO
IEA		 (PMID:18776696)
GO_REF:0000107		 RGD
Ensembl		 PMID:18776696 GO_REF:0000107 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Sds serine dehydratase involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:15689518), (PMID:18342636)		 Ensembl
GO_Central
RGD		 PMID:15689518 PMID:18342636 GO_REF:0000033 GO_REF:0000107 NCBI chr12:41,743,796...41,751,108
Ensembl chr12:36,083,229...36,088,203 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:17482557) RGD PMID:17482557 NCBI chr10:45,968,959...45,990,341
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
L-tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase IDA RGD PMID:11802786 RGD:70243 NCBI chr13:41,752,894...41,798,427
Ensembl chr13:39,200,314...39,245,209 		JBrowse link
G Afmid arylformamidase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:103,544,822...103,560,408
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA
ISO		 GO_REF:0000104
MGI:1918039 (PMID:28792876)		 UniProt
RGD		 PMID:28792876 GO_REF:0000104 NCBI chr 6:16,598,325...16,617,590
Ensembl chr 6:10,845,771...10,864,877 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IEA GO_REF:0000117
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IEA GO_REF:0000117
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:74,161,761...74,200,651
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) RGD PMID:17356132 PMID:25767141 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr13:90,089,340...90,121,108
Ensembl chr13:87,557,286...87,588,881 		JBrowse link
G Kynu kynureninase involved_in ISO
IEA		 (PMID:17334708)
GO_REF:0000002
GO_REF:0000104		 RGD
InterPro
UniProt		 PMID:17334708 GO_REF:0000002 GO_REF:0000104 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IEA GO_REF:0000043
GO_REF:0000117		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
L-tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase IDA RGD PMID:7236232 RGD:2303721 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7236232 GO_REF:0000033, RGD:2303721 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
L-tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) RGD PMID:32818467 PMID:32866000 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
L-tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
GO_REF:0000002
GO_REF:0000104
GO_REF:0000107
(PMID:15866519)
GO_REF:0000033		 UniProt
InterPro
Ensembl
RGD
GO_Central		 PMID:15866519 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr10:103,544,822...103,560,408
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 GO_REF:0000002
GO_REF:0000107
GO_REF:0000104
(PMID:11751753), (PMID:2419335)
GO_REF:0000033		 InterPro
Ensembl
UniProt
RGD
GO_Central		 PMID:2419335 PMID:11751753 PMID:10719243 PMID:11513477 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107, RGD:2290190, RGD:2290543 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17671174)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
(PMID:17499941), (PMID:17671174)
GO_REF:0000033
GO_REF:0000041		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:17499941 PMID:17671174 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr16:74,161,761...74,200,651
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Kynu kynureninase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
GO_REF:0000107
GO_REF:0000002
(PMID:27762317)
GO_REF:0000041		 UniProt
Ensembl
InterPro
RGD		 PMID:27762317 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldhd lactate dehydrogenase D involved_in ISO
IEA
IBA		 (PMID:30931947)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:30931947 GO_REF:0000033 GO_REF:0000107 NCBI chr19:56,492,827...56,497,695
Ensembl chr19:39,573,621...39,595,575 		JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 involved_in IDA
IBA		 PMID:14634044
GO_REF:0000033
PMID:10486137		 GO_Central PMID:14634044 PMID:10486137 GO_REF:0000033, RGD:2301710, RGD:2301713 NCBI chr 7:12,661,357...12,672,952
Ensembl chr 7:12,010,852...12,022,046 		JBrowse link
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 involved_in ISO
IBA		 (PMID:11461919), (PMID:9675028)
GO_REF:0000033		 RGD
GO_Central		 PMID:9675028 PMID:11461919 GO_REF:0000033 NCBI chr16:17,763,543...17,804,944
Ensembl chr16:17,707,317...17,804,940 		JBrowse link
G Cyp4f4 cytochrome P450, family 4, subfamily f, polypeptide 4 involved_in IDA
IBA		 PMID:9344476
GO_REF:0000033
PMID:14634044		 GO_Central PMID:9344476 PMID:14634044 GO_REF:0000033, RGD:15090848, RGD:2301710 NCBI chr 7:12,367,711...12,384,010
Ensembl chr 7:11,717,208...11,733,506 		JBrowse link
G Cyp4f40 cytochrome P450, family 4, subfamily f, polypeptide 40 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229 		JBrowse link
leukotriene D4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpep1 dipeptidase 1 involved_in ISO
IEA
ISS		 (PMID:32325220)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:32325220 GO_REF:0000024 GO_REF:0000107 NCBI chr19:68,118,270...68,143,781
Ensembl chr19:51,219,660...51,235,257 		JBrowse link
G Dpep2 dipeptidase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32325220)		 UniProt
Ensembl
RGD		 PMID:32325220 GO_REF:0000024 GO_REF:0000107 NCBI chr19:50,795,322...50,806,320
Ensembl chr19:33,885,478...33,891,954 		JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
ISS		 UniProtKB:P34230 (PMID:18757502), (PMID:23671276)
GO_REF:0000024		 RGD
UniProt		 PMID:18757502 PMID:23671276 GO_REF:0000024 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:3968063 GO_REF:0000002 GO_REF:0000033, RGD:2317678 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO
IEA		 (PMID:27018888)
GO_REF:0000107		 RGD
Ensembl		 PMID:27018888 GO_REF:0000107 NCBI chr17:23,113,578...23,199,616
Ensembl chr17:22,930,740...22,993,826 		JBrowse link
G Aig1 androgen-induced 1 involved_in ISO
IEA		 (PMID:27018888)
GO_REF:0000107		 RGD
Ensembl		 PMID:27018888 GO_REF:0000107 NCBI chr 1:9,866,546...10,089,454
Ensembl chr 1:8,046,430...8,269,084 		JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (PMID:16804080) RGD PMID:16804080 NCBI chr 1:90,093,433...90,112,117
Ensembl chr 1:80,965,627...80,984,310 		JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase involved_in ISS
ISO		 GO_REF:0000024
(PMID:10775527)		 UniProt
RGD		 PMID:10775527 GO_REF:0000024 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO
IEA		 (PMID:21642549), (PMID:21846720)
GO_REF:0000107		 RGD
Ensembl		 PMID:21642549 PMID:21846720 GO_REF:0000107 NCBI chr19:50,835,116...50,875,557
Ensembl chr19:50,835,221...50,875,553 		JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:31,142,476...31,147,464
Ensembl chr 6:25,422,526...25,427,514 		JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:142,626,748...142,707,892
Ensembl chr 1:133,217,375...133,299,061 		JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,996,010...2,051,311
Ensembl chr18:1,720,718...1,803,428 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IDA
ISO
IEA
IBA		 (PMID:1970566)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:1970566 PMID:3968063 GO_REF:0000033 GO_REF:0000107, RGD:2317678 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in ISO
ISS		 (PMID:10677294)
GO_REF:0000024		 RGD
UniProt		 PMID:10677294 GO_REF:0000024 NCBI chr16:17,017,168...17,035,368
Ensembl chr16:16,983,022...17,001,274 		JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in IDA PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:13,187,579...13,196,148
Ensembl chr10:13,187,578...13,196,095 		JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:30,165,435...30,177,462
Ensembl chr18:30,165,427...30,177,486 		JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:38,520,663...38,538,713
Ensembl chr14:38,520,705...38,538,713 		JBrowse link
G Nagk N-acetylglucosamine kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:117,838,761...117,846,304
Ensembl chr 4:116,281,328...116,313,137 		JBrowse link
G Npl N-acetylneuraminate pyruvate lyase involved_in IEA
IBA
ISO
ISS		 GO_REF:0000041
GO_REF:0000107
GO_REF:0000033
(PMID:11737202)
(PMID:33895133)
GO_REF:0000024		 UniProt
Ensembl
GO_Central
RGD		 PMID:11737202 PMID:33895133 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr13:68,205,602...68,247,940
Ensembl chr13:65,655,118...65,697,372 		JBrowse link
G Renbp renin binding protein involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:156,812,785...156,821,860
Ensembl chr  X:151,661,458...151,670,516 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO
IEA		 (PMID:19278978)
GO_REF:0000107		 RGD
Ensembl		 PMID:19278978 GO_REF:0000107 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO
IEA		 (PMID:12920182), (PMID:15677334)
GO_REF:0000107		 RGD
Ensembl		 PMID:12920182 PMID:15677334 GO_REF:0000107 NCBI chr12:48,026,394...48,138,214
Ensembl chr12:42,366,548...42,457,655 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19724020 RGD:2314644 NCBI chr 5:53,204,867...53,230,396
Ensembl chr 5:48,408,574...48,435,099 		JBrowse link
G Dbi diazepam binding inhibitor IDA RGD PMID:11485163 RGD:2316274 NCBI chr13:33,794,231...33,802,632
Ensembl chr13:31,206,988...31,268,693 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO
IEA		 (PMID:23209793)
GO_REF:0000107		 RGD
Ensembl		 PMID:23209793 GO_REF:0000107 NCBI chr 5:140,510,933...140,525,828
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Pink1 PTEN induced kinase 1 HMP RGD PMID:25421206 RGD:11560775 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:150,530,523...150,542,635 		JBrowse link
G Plin5 perilipin 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21885430), (PMID:22532565), (PMID:22675471)		 UniProt
Ensembl
RGD		 PMID:21885430 PMID:22532565 PMID:22675471 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:1,026,910...1,033,352
Ensembl chr 9:939,747...946,120 		JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO
IEA
IBA
ISS		 (PMID:25416781)
GO_REF:0000107
GO_REF:0000033
(PMID:25023281)
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:25023281 PMID:25416781 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:183,871,819...183,936,843
Ensembl chr 4:182,140,559...182,150,305 		JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oaz1 ornithine decarboxylase antizyme 1 IDA RGD PMID:8166639 RGD:401851045 NCBI chr 7:9,534,530...9,536,990
Ensembl chr 7:8,883,851...8,886,310 		JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine transcarbamylase involved_in ISO
IEA		 (PMID:2556444), (PMID:8112735)
GO_REF:0000107		 RGD
Ensembl		 PMID:2556444 PMID:8112735 GO_REF:0000107 NCBI chr  X:15,126,358...15,202,473
Ensembl chr  X:12,453,834...12,566,918 		JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:127,956,126...127,966,348
Ensembl chr 8:119,079,775...119,088,624 		JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:127,750,771...127,759,589
Ensembl chr 8:118,872,997...118,881,825 		JBrowse link
G Pon3 paraoxonase 3 IDA RGD PMID:12946270 RGD:1303961 NCBI chr 4:34,323,546...34,350,244
Ensembl chr 4:33,349,168...33,383,855 		JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
ISS		 (PMID:23123468)
(PMID:18723473), (PMID:18854420), (PMID:23123468)
GO_REF:0000024		 RGD
UniProt		 PMID:18723473 PMID:18854420 PMID:23123468 GO_REF:0000024 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO
IEA
ISS		 (PMID:10196381)
GO_REF:0000107
(PMID:18723473), (PMID:18854420)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:10196381 PMID:18723473 PMID:18854420 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 IGI RGD PMID:14711823 RGD:2312802 NCBI chr 1:264,294,851...264,341,943
Ensembl chr 1:254,292,521...254,336,607 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IMP RGD PMID:19302064 RGD:2311346 NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Fabp1 fatty acid binding protein 1 IDA peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr 4:104,744,302...104,753,119
Ensembl chr 4:103,191,006...103,194,788 		JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO (PMID:16814735) RGD PMID:16814735 NCBI chr 9:91,001,137...91,053,959
Ensembl chr 9:83,548,944...83,606,122 		JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr16:85,190,310...85,214,543
Ensembl chr16:78,485,045...78,512,482 		JBrowse link
G Mtln mitoregulin involved_in ISO (PMID:29949755) RGD PMID:29949755 NCBI chr 3:115,018,810...115,019,668
Ensembl chr 3:115,019,473...115,019,643
Ensembl chr 3:115,019,473...115,019,643 		JBrowse link
G Obp2a odorant binding protein 2A acts_upstream_of_or_within ISO (PMID:21908604) RGD PMID:21908604 NCBI chr 3:28,904,024...28,907,391
Ensembl chr 3:8,505,990...8,509,269 		JBrowse link
G Plin5 perilipin 5 involved_in IDA
IEA
ISO		 PMID:22127648
GO_REF:0000107
(PMID:17130488)		 Ensembl
RGD		 PMID:17130488 PMID:22127648 GO_REF:0000107, RGD:8553692 NCBI chr 9:1,026,910...1,033,352
Ensembl chr 9:939,747...946,120 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) RGD PMID:20007935 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA
IBA		 (PMID:16616139)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16616139 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Prodh proline dehydrogenase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:96,414,275...96,431,604
Ensembl chr11:82,910,137...82,927,305 		JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:94,881,000...94,894,609
Ensembl chr 1:85,753,644...85,767,162 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA GO_REF:0000041
GO_REF:0000002
GO_REF:0000104		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 5:157,163,189...157,188,673
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Iffo2 intermediate filament family orphan 2 involved_in IEA GO_REF:0000041
GO_REF:0000002
GO_REF:0000104		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 5:151,830,900...151,876,948
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Prodh proline dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:96,414,275...96,431,604
Ensembl chr11:82,910,137...82,927,305 		JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,881,000...94,894,609
Ensembl chr 1:85,753,644...85,767,162 		JBrowse link
G Tas1r2 taste 1 receptor member 2 involved_in IEA GO_REF:0000041
GO_REF:0000002
GO_REF:0000104		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 5:157,192,799...157,208,937
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
propionate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,997,853...33,006,691
Ensembl chr15:29,027,894...29,037,283 		JBrowse link
pyruvate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in ISO
IEA		 (PMID:27621431)
GO_REF:0000107		 RGD
Ensembl		 PMID:27621431 GO_REF:0000107 NCBI chr 8:59,875,537...59,900,947
Ensembl chr 8:50,978,051...51,004,479
Ensembl chr 1:50,978,051...51,004,479 		JBrowse link
G Kyat1 kynurenine aminotransferase 1 IDA RGD PMID:7796908 RGD:9685040 NCBI chr 3:33,857,407...33,891,153
Ensembl chr 3:13,459,591...13,493,355 		JBrowse link
G Ldha lactate dehydrogenase A involved_in ISO MGI:2384559 (PMID:21041631), (PMID:8224816) RGD PMID:8224816 PMID:21041631 NCBI chr 1:106,508,092...106,517,512
Ensembl chr 1:97,366,021...97,433,472 		JBrowse link
G Ldhc lactate dehydrogenase C involved_in
acts_upstream_of_or_within		 ISO
IEA		 MGI:3775042 (PMID:21565994)
(PMID:18367675)
GO_REF:0000107		 RGD
Ensembl		 PMID:18367675 PMID:21565994 GO_REF:0000107 NCBI chr 1:106,522,140...106,539,649
Ensembl chr 1:97,382,379...97,403,378 		JBrowse link
G Slc16a1 solute carrier family 16 member 1 involved_in ISO
IEA		 (PMID:29026134)
GO_REF:0000107		 RGD
Ensembl		 PMID:29026134 GO_REF:0000107 NCBI chr 2:194,805,556...194,832,966
Ensembl chr 2:192,124,289...192,144,611 		JBrowse link
G Slc16a3 solute carrier family 16 member 3 involved_in ISO
IEA		 MGI:6467009 (PMID:31837519)
GO_REF:0000107		 RGD
Ensembl		 PMID:31837519 GO_REF:0000107 NCBI chr10:106,712,328...106,756,168
Ensembl chr10:106,212,778...106,222,562 		JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:24038671), (PMID:3409840), (PMID:9473669)
GO_REF:0000033
(PMID:9473669)		 RGD
GO_Central		 PMID:3409840 PMID:9473669 PMID:24038671 GO_REF:0000033 NCBI chr 1:191,148,715...191,164,006
Ensembl chr 1:181,718,190...181,733,486 		JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22619174)		 UniProt
RGD		 PMID:22619174 GO_REF:0000024 NCBI chr 3:74,424,620...74,520,646
Ensembl chr 3:54,017,127...54,112,730 		JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:25255441), (PMID:9126326), (PMID:9256488), (PMID:9418970) RGD PMID:9126326 PMID:9256488 PMID:9418970 PMID:25255441 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A TAS RGD PMID:11087756 RGD:1600733 NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in ISO
IEA		 (PMID:22002062)
GO_REF:0000107		 RGD
Ensembl		 PMID:22002062 GO_REF:0000107 NCBI chr19:36,580,736...36,672,242
Ensembl chr19:20,407,477...20,499,014 		JBrowse link
G Mlycd malonyl-CoA decarboxylase IDA RGD PMID:10516138 RGD:1600797 NCBI chr19:64,356,582...64,372,447
Ensembl chr19:47,447,970...47,463,793 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IDA
IMP		 RGD PMID:17142137 PMID:17142137 RGD:1625611, RGD:1625611 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Tysnd1 trypsin like peroxisomal matrix peptidase 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:22002062)		 UniProt
Ensembl
GO_Central
RGD		 PMID:22002062 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:30,180,878...30,188,239
Ensembl chr20:29,638,277...29,643,995 		JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:10823918)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000033
(PMID:9250660)		 RGD
Ensembl
UniProt
GO_Central		 PMID:9250660 PMID:10823918 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:244,883,822...244,887,657
Ensembl chr 1:235,471,298...235,475,204 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in IMP
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000117
(PMID:10823918)		 Ensembl
GO_Central
UniProt
RGD		 PMID:10823918 PMID:21138835 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:6771354 NCBI chr 4:118,599,356...118,616,176
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:14532297)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:14532297 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:244,870,412...244,881,610
Ensembl chr 1:235,459,356...235,466,842 		JBrowse link
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 involved_in ISO
IEA		 (PMID:26936974)
GO_REF:0000107		 RGD
Ensembl		 PMID:26936974 GO_REF:0000107 NCBI chr12:20,405,400...20,410,282
Ensembl chr12:15,291,704...15,296,421 		JBrowse link
G Klf9 KLF transcription factor 9 acts_upstream_of_or_within ISO (PMID:9250660) RGD PMID:9250660 NCBI chr 1:230,126,646...230,151,641
Ensembl chr 1:220,700,108...220,725,037 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:9250660) RGD PMID:9250660 NCBI chr 7:135,419,864...135,450,513
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Strap serine/threonine kinase receptor associated protein acts_upstream_of_or_within ISO (PMID:9250660) RGD PMID:9250660 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase IDA RGD PMID:11741948 RGD:730275 NCBI chr 3:164,029,338...164,044,562
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:30,908,621...30,973,409
Ensembl chr 3:10,510,553...10,573,874 		JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase involved_in IMP PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr 9:99,337,796...99,358,487
Ensembl chr 9:91,890,306...91,910,941 		JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:17034760)		 GO_Central
RGD		 PMID:17034760 GO_REF:0000033 NCBI chr 4:104,671,305...104,691,084
Ensembl chr 4:103,112,963...103,132,017 		JBrowse link
short-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO (PMID:16804080) RGD PMID:16804080 NCBI chr19:30,046,494...30,085,039
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcat glycine C-acetyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:112,475,572...112,481,920
Ensembl chr 7:110,595,091...110,601,473 		JBrowse link
G Tdh L-threonine dehydrogenase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:26492815)
(PMID:21896756)		 GO_Central
Ensembl
RGD		 PMID:21896756 PMID:26492815 GO_REF:0000033 GO_REF:0000107 NCBI chr15:37,739,823...37,753,365
Ensembl chr15:37,739,823...37,753,365 		JBrowse link
G Tha1 threonine aldolase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,094,681...103,100,169
Ensembl chr10:103,094,681...103,100,519 		JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:147,957,931...147,980,708
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:112,525,576...112,536,228
Ensembl chr 6:106,794,074...106,805,284 		JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase involved_in
acts_upstream_of_or_within		 TAS
IEA
IBA
ISO
IDA		 GO_REF:0000043
GO_REF:0000033
(PMID:31537781)
PMID:8814303		 UniProt
GO_Central
RGD		 PMID:31537781 PMID:12867153 PMID:8814303 GO_REF:0000033 GO_REF:0000043, RGD:632936, RGD:8554707 NCBI chr12:39,042,246...39,053,596
Ensembl chr12:33,381,231...33,392,766 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132) RGD PMID:17356132 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Tat tyrosine aminotransferase involved_in ISO
IEA
IBA
ISS		 (PMID:7999802)
GO_REF:0000107
GO_REF:0000043
(PMID:21153519)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
UniProt
GO_Central		 PMID:7999802 PMID:21153519 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr19:54,856,604...54,867,168
Ensembl chr19:37,947,112...37,958,031 		JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:23835272)		 GO_Central
Ensembl
RGD		 PMID:23835272 PMID:2768248 GO_REF:0000033 GO_REF:0000107, RGD:1599052 NCBI chr 6:109,809,092...109,829,725
Ensembl chr 6:104,077,979...104,098,656 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IEA
IBA
ISS
ISO		 GO_REF:0000041
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:16466957)		 UniProt
Ensembl
GO_Central
RGD		 PMID:16466957 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:82,979,759...83,077,819
Ensembl chr 4:81,649,175...81,780,617 		JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 NCBI chr 9:56,082,082...56,161,796
Ensembl chr 9:48,590,099...48,669,824 		JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:32169171)		 Ensembl
RGD		 PMID:32169171 GO_REF:0000107 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
IBA
ISS
IMP		 UniProtKB:P34230|UniProtKB:P41909 (PMID:18757502), (PMID:21145416), (PMID:9425230)
(PMID:18723473)
GO_REF:0000033
GO_REF:0000024
PMID:25043761		 RGD
GO_Central
UniProt		 PMID:9425230 PMID:18723473 PMID:18757502 PMID:21145416 PMID:25043761 GO_REF:0000024 GO_REF:0000033, RGD:13673760 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IMP
IEA
ISO
IBA
ISS		 PMID:25043761
GO_REF:0000107
(PMID:18723473)
GO_REF:0000033
GO_REF:0000024
UniProtKB:P41909 (PMID:21145416)		 Ensembl
RGD
GO_Central
UniProt		 PMID:18723473 PMID:21145416 PMID:25043761 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:13673760 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
IBA
IEA		 UniProtKB:P33897 (PMID:9425230)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:9425230 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:212,536,791...212,590,379
Ensembl chr 2:209,852,087...209,906,020 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 acts_upstream_of_or_within ISO
IEA		 MGI:2663647 (PMID:12719378)
GO_REF:0000107		 RGD
Ensembl		 PMID:12719378 GO_REF:0000107 NCBI chr 3:134,258,101...134,295,581
Ensembl chr 3:113,804,728...113,842,208 		JBrowse link
G Slc27a4 solute carrier family 27 member 4 acts_upstream_of_or_within ISO
IEA		 (PMID:17522045)
GO_REF:0000107		 RGD
Ensembl		 PMID:17522045 GO_REF:0000107 NCBI chr 3:33,472,903...33,485,824
Ensembl chr 3:13,075,022...13,087,943 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        small molecule metabolic process 1947
          organic acid metabolic process 1062
            organic acid catabolic process 250
              carboxylic acid catabolic process 250
                L-ascorbic acid catabolic process 0
                N-acetylmuramic acid catabolic process + 0
                N-acetylneuraminate catabolic process 6
                achromobactin catabolic process 0
                alginic acid catabolic process 0
                alpha-amino acid catabolic process + 98
                aromatic amino acid family catabolic process + 22
                arsonoacetate catabolic process 0
                branched-chain amino acid catabolic process + 21
                cephalosporin C catabolic process 0
                chrysobactin catabolic process 0
                cspyrone B1 catabolic process 0
                dicarboxylic acid catabolic process + 18
                endocrocin catabolic process 0
                fructoselysine catabolic process 0
                fumonisin catabolic process 0
                gerfelin catabolic process 0
                gibberellin catabolic process 0
                helvolic acid catabolic process 0
                leukotriene catabolic process + 6
                monensin A catabolic process 0
                monocarboxylic acid catabolic process + 134
                monodictyphenone catabolic process 0
                non-proteinogenic amino acid catabolic process + 17
                phthalate catabolic process 0
                proteinogenic amino acid catabolic process + 80
                pyochelin catabolic process 0
                sulfur amino acid catabolic process + 7
                tensidol B catabolic process 0
                tricarboxylic acid catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        small molecule metabolic process 1947
          organic acid metabolic process 1062
            oxoacid metabolic process 1040
              carboxylic acid metabolic process 1025
                carboxylic acid catabolic process 250
                  L-ascorbic acid catabolic process 0
                  N-acetylmuramic acid catabolic process + 0
                  N-acetylneuraminate catabolic process 6
                  achromobactin catabolic process 0
                  alginic acid catabolic process 0
                  alpha-amino acid catabolic process + 98
                  aromatic amino acid family catabolic process + 22
                  arsonoacetate catabolic process 0
                  branched-chain amino acid catabolic process + 21
                  cephalosporin C catabolic process 0
                  chrysobactin catabolic process 0
                  cspyrone B1 catabolic process 0
                  dicarboxylic acid catabolic process + 18
                  endocrocin catabolic process 0
                  fructoselysine catabolic process 0
                  fumonisin catabolic process 0
                  gerfelin catabolic process 0
                  gibberellin catabolic process 0
                  helvolic acid catabolic process 0
                  leukotriene catabolic process + 6
                  monensin A catabolic process 0
                  monocarboxylic acid catabolic process + 134
                  monodictyphenone catabolic process 0
                  non-proteinogenic amino acid catabolic process + 17
                  phthalate catabolic process 0
                  proteinogenic amino acid catabolic process + 80
                  pyochelin catabolic process 0
                  sulfur amino acid catabolic process + 7
                  tensidol B catabolic process 0
                  tricarboxylic acid catabolic process + 0
paths to the root