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ONTOLOGY REPORT - ANNOTATIONS


Term:alcohol biosynthetic process
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Accession:GO:0046165 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
Synonyms:exact_synonym: alcohol anabolism;   alcohol biosynthesis;   alcohol formation;   alcohol synthesis


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aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
G LOC101968373 cytochrome P450 11B3, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:9,034,177...9,039,486 JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,213,700...1,250,181
Ensembl chrNW_004936569:1,213,573...1,250,589
JBrowse link
G LOC101972957 vitamin D 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:3,881,630...3,897,613
Ensembl chrNW_004936528:3,881,087...3,900,302
JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8647961) Ensembl
MGI
PMID:8647961 GO_REF:0000107 NCBI chrNW_004936542:2,111,055...2,112,626
Ensembl chrNW_004936542:2,111,052...2,112,854
JBrowse link
G Cftr CF transmembrane conductance regulator acts_upstream_of_or_within ISO (PMID:17085523) MGI PMID:17085523 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11519011)
(PMID:14684813), (PMID:16321981), (PMID:16513830)
MGI
Ensembl
PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000107 NCBI chrNW_004936522:6,423,561...6,447,363
Ensembl chrNW_004936522:6,423,561...6,444,814
JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:11171067 GO_REF:0000107 GO_REF:0000118 RGD:628445 NCBI chrNW_004936721:508,716...515,968
Ensembl chrNW_004936721:509,374...515,918
JBrowse link
G Fdft1 farnesyl-diphosphate farnesyltransferase 1 ISO RGD PMID:16440058 RGD:1626611 NCBI chrNW_004936628:3,599,435...3,600,061 JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,269,900...1,285,853
Ensembl chrNW_004936809:1,269,914...1,285,889
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15845870), (PMID:7798939), (PMID:8647961) UniProt
MGI
Ensembl
PMID:7798939 PMID:8647961 PMID:15845870 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936549:1,378,536...1,400,501
Ensembl chrNW_004936549:1,378,736...1,400,532
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936480:18,862,288...18,882,614
Ensembl chrNW_004936480:18,862,238...18,882,616
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936627:4,451,847...4,473,163
Ensembl chrNW_004936627:4,451,823...4,473,223
JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12829805) MGI
Ensembl
TreeGrafter
PMID:12829805 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936831:951,603...976,159
Ensembl chrNW_004936831:951,562...977,208
JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936484:13,054,155...13,061,935 JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936484:13,086,928...13,092,291
Ensembl chrNW_004936484:13,088,030...13,092,291
JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16955138) Ensembl
MGI
TreeGrafter
PMID:16955138 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936527:9,684,304...9,696,951
Ensembl chrNW_004936527:9,685,695...9,692,830
JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16955138) TreeGrafter
MGI
Ensembl
PMID:16955138 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:52,120,063...52,140,646
Ensembl chrNW_004936469:52,117,733...52,140,765
JBrowse link
G Lbr lamin B receptor involved_in IEA UniProt
Ensembl
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936526:2,254,463...2,282,785
Ensembl chrNW_004936526:2,254,449...2,282,785
JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962
JBrowse link
G LOC101962805 NADH-cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936718:552,369...564,195
Ensembl chrNW_004936718:549,938...564,195
JBrowse link
G LOC101970547 isopentenyl-diphosphate Delta-isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:10,541,992...10,542,792 JBrowse link
G LOC101971285 7-dehydrocholesterol reductase involved_in ISO (PMID:9465114) UniProt
RGD
PMID:9465114 PMID:9831636 PMID:10329655 RGD:2316918 RGD:632010 NCBI chrNW_004936794:1,432,379...1,468,966 JBrowse link
G Lss lanosterol synthase involved_in ISO
IEA
RGD
Ensembl
TreeGrafter
PMID:1429550 PMID:16440058 GO_REF:0000107 GO_REF:0000118 RGD:1626611 RGD:2316919 NCBI chrNW_004936778:323,120...351,100
Ensembl chrNW_004936778:323,014...351,102
JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936641:1,030,465...1,035,967
Ensembl chrNW_004936641:1,030,595...1,035,954
JBrowse link
G Mvk mevalonate kinase involved_in IEA TreeGrafter
UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936769:1,274,595...1,295,186
Ensembl chrNW_004936769:1,274,540...1,298,178
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chrNW_004936478:19,434,557...19,452,245
Ensembl chrNW_004936478:19,434,557...19,452,248
JBrowse link
G Pmvk phosphomevalonate kinase involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:4,473,554...4,482,396
Ensembl chrNW_004936580:4,473,359...4,482,631
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:9329978) Ensembl
MGI
PMID:9329978 GO_REF:0000107 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776
JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA UniProt
Ensembl
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:4,253,725...4,258,198
Ensembl chrNW_004936599:4,253,735...4,258,071
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955024 lanosterol 14-alpha demethylase ISO RGD PMID:7581240 RGD:2316902 NCBI chrNW_004936621:2,209,255...2,232,404
Ensembl chrNW_004936621:2,209,199...2,232,531
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,423,561...6,447,363
Ensembl chrNW_004936522:6,423,561...6,444,814
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101971285 7-dehydrocholesterol reductase involved_in ISO (PMID:38297129), (PMID:38297130) UniProt PMID:38297129 PMID:38297130 NCBI chrNW_004936794:1,432,379...1,468,966 JBrowse link
G Sc5d sterol-C5-desaturase involved_in ISO
IEA
RGD
Ensembl
PMID:7961720 GO_REF:0000107 RGD:2316911 NCBI chrNW_004936542:6,046,425...6,062,825
Ensembl chrNW_004936542:6,046,390...6,059,074
JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chrNW_004936526:2,589,254...2,652,831
Ensembl chrNW_004936526:2,614,059...2,653,286
JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,914,018...10,949,138
Ensembl chrNW_004936474:10,913,903...10,950,095
JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in ISO (PMID:38821050) UniProt PMID:38821050 NCBI chrNW_004936644:3,625,705...3,652,759 JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25066056) MGI
Ensembl
InterPro
TreeGrafter
PMID:25066056 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936658:695,431...718,891
Ensembl chrNW_004936658:695,609...718,746
JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:17,727,418...17,744,780
Ensembl chrNW_004936482:17,727,310...17,745,225
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17545671) Ensembl
MGI
PMID:17545671 GO_REF:0000107 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932
JBrowse link
G Lep leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO PMID:26755581
(PMID:26755581)
UniProt PMID:26755581 RGD:10679995 NCBI chrNW_004936694:1,834,016...1,836,359 JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11792850) TreeGrafter
MGI
Ensembl
PMID:11792850 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:428,473...450,452
Ensembl chrNW_004936722:428,307...437,328
JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817
JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936656:2,598,454...2,616,643
Ensembl chrNW_004936656:2,598,413...2,618,396
JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936626:268,788...310,781
Ensembl chrNW_004936626:268,727...310,787
JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IEA Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936596:2,815,782...2,819,100
Ensembl chrNW_004936596:2,815,821...2,819,020
JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936529:1,338,812...1,396,981
Ensembl chrNW_004936529:1,338,812...1,396,965
JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:487,277...515,614
Ensembl chrNW_004936529:486,879...515,674
JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11502751) MGI
TreeGrafter
InterPro
Ensembl
PMID:11502751 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:25,208,332...25,231,236
Ensembl chrNW_004936476:25,208,284...25,231,281
JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15939867) TreeGrafter
MGI
InterPro
PMID:15939867 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936614:4,724,935...4,772,373
Ensembl chrNW_004936614:4,725,250...4,772,153
JBrowse link
G Ippk inositol-pentakisphosphate 2-kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:2,200,588...2,254,130
Ensembl chrNW_004936487:2,198,973...2,254,151
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936471:4,840,113...4,848,881
Ensembl chrNW_004936471:4,840,152...4,848,881
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936526:3,378,046...3,477,177
Ensembl chrNW_004936526:3,376,786...3,477,554
JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936661:3,006,506...3,023,355
Ensembl chrNW_004936661:3,006,505...3,022,823
JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:6,707,865...6,751,064
Ensembl chrNW_004936471:6,707,893...6,751,045
JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936523:1,321,755...1,418,267
Ensembl chrNW_004936523:1,331,487...1,418,290
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9013981) Ensembl
MGI
PMID:9013981 GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098
JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9013981) MGI
Ensembl
PMID:9013981 GO_REF:0000107 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004936522:8,004,503...8,110,995
Ensembl chrNW_004936522:8,005,442...8,110,889
JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:6,428,824...6,477,007
Ensembl chrNW_004936528:6,429,973...6,477,218
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:15947108) BHF-UCL PMID:15947108 NCBI chrNW_004936537:6,610,565...6,618,509
Ensembl chrNW_004936537:6,610,565...6,618,450
JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:15243130) BHF-UCL PMID:15243130 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435
JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:1917954) RGD
BHF-UCL
PMID:1917954 PMID:9225228 RGD:10059686 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Chlsn cholesin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,213,948...1,332,534
Ensembl chrNW_004936754:1,214,480...1,324,497
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:80,583...116,027
Ensembl chrNW_004936636:80,564...116,694
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:1,193,679...1,210,059
Ensembl chrNW_004936710:1,193,411...1,210,739
JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 acts_upstream_of_or_within ISO (PMID:17202134) MGI PMID:17202134 NCBI chrNW_004936484:13,086,928...13,092,291
Ensembl chrNW_004936484:13,088,030...13,092,291
JBrowse link
G Insig1 insulin induced gene 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:9,684,304...9,696,951
Ensembl chrNW_004936527:9,685,695...9,692,830
JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:6,428,824...6,477,007
Ensembl chrNW_004936528:6,429,973...6,477,218
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chrNW_004936596:2,815,782...2,819,100
Ensembl chrNW_004936596:2,815,821...2,819,020
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,762,421...12,818,249
Ensembl chrNW_004936491:12,762,328...12,818,306
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004936787:330,390...1,491,994
Ensembl chrNW_004936787:332,342...1,491,285
JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936669:3,302,014...3,326,233
Ensembl chrNW_004936669:3,301,802...3,320,643
JBrowse link
G LOC101967457 putative DBH-like monooxygenase protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936971:172,262...179,921 JBrowse link
G Moxd1 monooxygenase DBH like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936560:334,294...413,559
Ensembl chrNW_004936560:332,718...413,559
JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206
JBrowse link
polyprenol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:10,914,018...10,949,138
Ensembl chrNW_004936474:10,913,903...10,950,095
JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023
JBrowse link
G Dab2 DAB adaptor protein 2 ISO RGD PMID:17303656 RGD:7243836 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875
JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664
JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,620,763...1,678,561
Ensembl chrNW_004936500:1,620,641...1,678,607
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,090,282...4,106,025
Ensembl chrNW_004936542:4,091,283...4,105,370
JBrowse link
G Fdps farnesyl diphosphate synthase ISO RGD PMID:18637708 RGD:2316295 NCBI chrNW_004936580:4,799,354...4,808,406 JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:11,590,687...11,684,410
Ensembl chrNW_004936504:11,590,637...11,685,194
JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:353,405...435,087
Ensembl chrNW_004936810:353,067...438,337
JBrowse link
G LOC101970910 cytochrome P450 7A1 involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chrNW_004936496:4,599,138...4,605,653
Ensembl chrNW_004936496:4,599,138...4,605,653
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
JBrowse link
G Mbtps2 membrane bound transcription factor peptidase, site 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:2,464,152...2,510,984
Ensembl chrNW_004936624:2,463,909...2,511,158
JBrowse link
G Npy1r neuropeptide Y receptor Y1 ISO RGD PMID:32976883 RGD:405096663 NCBI chrNW_004936555:2,267,727...2,276,673
Ensembl chrNW_004936555:2,267,669...2,276,778
JBrowse link
G Paqr3 progestin and adipoQ receptor family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:2,497,219...2,520,493
Ensembl chrNW_004936676:2,497,728...2,520,499
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,750,015...2,765,914
Ensembl chrNW_004936659:2,750,537...2,765,753
JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,353,905...1,464,636
Ensembl chrNW_004936608:1,353,897...1,464,636
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:33942715) UniProt PMID:33942715 NCBI chrNW_004936489:13,901,066...14,000,652
Ensembl chrNW_004936489:13,901,754...13,999,983
JBrowse link
G Scap SREBF chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,124,573...1,180,219
Ensembl chrNW_004936596:1,122,042...1,180,297
JBrowse link
G Scp2 sterol carrier protein 2 ISO RGD PMID:2554812 RGD:9850260 NCBI chrNW_004936522:8,004,503...8,110,995
Ensembl chrNW_004936522:8,005,442...8,110,889
JBrowse link
G Sec14l2 SEC14 like lipid binding 2 ISO RGD PMID:11226224 RGD:727312 NCBI chrNW_004936904:254,979...276,267
Ensembl chrNW_004936904:253,436...276,897
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16046411)
(PMID:9329978)
Ensembl
MGI
PMID:9329978 PMID:16046411 GO_REF:0000107 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:12177166), (PMID:32322062), (PMID:38503280)
(PMID:33942715), (PMID:34021134)
UniProt PMID:12177166 PMID:32322062 PMID:33942715 PMID:34021134 PMID:38503280 NCBI chrNW_004936492:115,923...174,614
Ensembl chrNW_004936492:115,821...174,775
JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8396727 PMID:8943280 RGD:2315982 RGD:631732 NCBI chrNW_004936478:7,278,081...7,322,970
Ensembl chrNW_004936478:7,278,147...7,318,458
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,415,544...6,423,863
Ensembl chrNW_004936557:6,415,547...6,424,711
JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004936903:146,108...162,410 JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004936514:10,240,990...10,272,859
Ensembl chrNW_004936514:10,241,020...10,272,816
JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099
JBrowse link
G Pth parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,081,569...5,084,030
Ensembl chrNW_004936528:5,083,596...5,084,030
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004936596:674,088...693,191
Ensembl chrNW_004936596:674,088...693,213
JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,288,891...1,293,555
Ensembl chrNW_004936754:1,288,912...1,293,427
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:3,928,467...3,983,481
Ensembl chrNW_004936508:3,928,466...3,983,890
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004936519:865,756...872,466
Ensembl chrNW_004936519:866,208...872,393
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:2,468,020...2,501,344
Ensembl chrNW_004936498:2,500,128...2,501,114
JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004936473:27,364,404...27,387,337
Ensembl chrNW_004936473:27,364,389...27,387,412
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098
JBrowse link
regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn2 chloride voltage-gated channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,525,461...5,539,351
Ensembl chrNW_004936578:5,525,601...5,539,472
JBrowse link
regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 NOT|involved_in ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167
JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16455790) Ensembl
MGI
PMID:16455790 GO_REF:0000107 NCBI chrNW_004936493:10,509,118...10,549,144
Ensembl chrNW_004936493:10,509,118...10,549,144
JBrowse link
G Aqp8 aquaporin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:9,430,872...9,438,182
Ensembl chrNW_004936501:9,430,775...9,436,813
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:80,583...116,027
Ensembl chrNW_004936636:80,564...116,694
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:1,193,679...1,210,059
Ensembl chrNW_004936710:1,193,411...1,210,739
JBrowse link
G Gpr146 G protein-coupled receptor 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,242,450...1,257,903
Ensembl chrNW_004936754:1,242,450...1,257,903
JBrowse link
G LOC101971285 7-dehydrocholesterol reductase ISO RGD PMID:10329655 RGD:632010 NCBI chrNW_004936794:1,432,379...1,468,966 JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:800,197...852,659
Ensembl chrNW_004936709:799,961...851,585
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chrNW_004936702:1,573,616...1,626,323
Ensembl chrNW_004936702:1,573,650...1,591,004
JBrowse link
G Scap SREBF chaperone involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054043) TreeGrafter
MGI
Ensembl
PMID:16054043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:1,124,573...1,180,219
Ensembl chrNW_004936596:1,122,042...1,180,297
JBrowse link
regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,225,624...22,238,825
Ensembl chrNW_004936477:22,225,618...22,238,803
JBrowse link
G H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,359,624...3,376,598
Ensembl chrNW_004936623:3,351,716...3,375,146
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin beta 1 ISO RGD PMID:20705669 RGD:5509896 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:20705669 RGD:5509896 NCBI chrNW_004936599:2,437,061...2,456,141
Ensembl chrNW_004936599:2,437,032...2,456,147
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:12869647 RGD:596992334 NCBI chrNW_004936514:10,240,990...10,272,859
Ensembl chrNW_004936514:10,241,020...10,272,816
JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B ISO RGD PMID:6690344 PMID:21376710 RGD:1626096 RGD:8548687 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967158 serine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9363775) Ensembl
MGI
PMID:9363775 GO_REF:0000107 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19416652) MGI
Ensembl
PMID:19416652 GO_REF:0000107 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254
JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect
involved_in
ISO
IEA
(PMID:26510981) ARUK-UCL
Ensembl
PMID:26510981 GO_REF:0000107 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167
JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA TreeGrafter
UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831
JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409
JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206
JBrowse link
G Agk acylglycerol kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936592:5,454,860...5,531,285
Ensembl chrNW_004936592:5,457,582...5,531,000
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347
JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G LOC101967158 serine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16216550) TreeGrafter
MGI
Ensembl
PMID:16216550 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16216550) Ensembl
MGI
TreeGrafter
PMID:16216550 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254
JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828
JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:8,717,821...8,738,923
Ensembl chrNW_004936494:8,716,829...8,739,066
JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936708:1,270,720...1,301,493
Ensembl chrNW_004936708:1,271,190...1,271,420
JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936697:232,048...275,420 JBrowse link
G LOC101968888 sepiapterin reductase-like involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936491:16,715,851...16,744,284 JBrowse link
G LOC101973044 GTP cyclohydrolase 1-like involved_in IEA TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004937155:57,736...58,850 JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936521:7,843,945...7,847,827
Ensembl chrNW_004936521:7,845,870...7,848,426
JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936597:2,113,428...2,161,329
Ensembl chrNW_004936597:2,119,136...2,161,379
JBrowse link
G Pts 6-pyruvoyltetrahydropterin synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9894812) UniProt
MGI
InterPro
Ensembl
PMID:9894812 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936612:2,247,825...2,255,277
Ensembl chrNW_004936612:2,246,878...2,253,675
JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in ISO
IEA
RGD
UniProt
TreeGrafter
PMID:660556 PMID:9235988 GO_REF:0000043 GO_REF:0000118 RGD:4139903 RGD:5128582 NCBI chrNW_004936477:10,687,328...10,708,015
Ensembl chrNW_004936477:10,687,276...10,708,031
JBrowse link
G Spr sepiapterin reductase involved_in ISO
IEA
RGD
InterPro
TreeGrafter
PMID:2179471 GO_REF:0000002 GO_REF:0000118 RGD:1600056 NCBI chrNW_004936491:16,693,940...16,699,040 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 17411
    cellular process 17014
      metabolic process 11311
        small molecule metabolic process 1622
          alcohol metabolic process 319
            alcohol biosynthetic process 146
              amino acid catabolic process to alcohol via Ehrlich pathway + 0
              cyclopentanol biosynthetic process 0
              fatty alcohol biosynthetic process + 0
              fonsecin biosynthetic process 0
              monensin A biosynthetic process 0
              negative regulation of alcohol biosynthetic process + 16
              octopamine biosynthetic process 3
              patulin biosynthetic process + 0
              polyol biosynthetic process + 69
              polyprenol biosynthetic process + 4
              positive regulation of alcohol biosynthetic process + 36
              prenol biosynthetic process 0
              primary alcohol biosynthetic process + 13
              regulation of alcohol biosynthetic process + 64
              secondary alcohol biosynthetic process + 57
              tertiary alcohol biosynthetic process + 8
paths to the root